Carg02466 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02466
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Myb-related transcription factor
Location	Cucurbita_argyrosperma_scaffold_009 : 122122 .. 123400 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGGCAACCTTGCTGTGACAAACTTGGAGTTAAAAAAGGCCCTTGGACTGCTGACGAAGACAACAAACTCATCAACTTTATACTCACTAATGGGCAGTGCTGTTGGCGGGCCGTCCCTAAGCTCGCTGGCCTCCGCCGTTGTGGCAAAAGCTGCCGCCTTCGTTGGACTAATTATCTCCGCCCTGATCTTAAGCGAGGCCTTCTCTCTGAAGCTGAAGAGCAATTGGTGATTGATCTTCATGCTCGTCTGGGAAACAGGTTGGTGTTATTATTTTATCATTTTTGGGACTTGGGTCATCGGAATTCAGTGAAATTTAAGAAAAGTTTTGGTTTTTTTTGGTACCCTTTTGGTGATTTTAGCTTCAAAGCTCCTTCTCAACCACCTTCATTTCTTCAATCTTAAGCTGAGAAGTTCATTTACGCATTTTGAAGTAATGTGTAGGAAAGAAGACAAACTTAACGTCTGTTTGTATTCTGAATTTGTATCTTAACTATACATTCAATGTCTTGTTTCATATTTTTCTGTCGCTTTCTACCTCTCTCTTTGATTTTTGTCAAATCCTTGCGTGATTTAAGATGGCTTTCCAACCCCTTTATAAGAAACTACTTTTTCATCGCAAACATCTCTCTCGTCTCTCGTGTCATGGAGATATATTCCTTACTTATAATTCTATGATTATTCTTTAAATTAGTCAAAAAAAAAAATTACATTTTAATGATTGATGTTTAGATGGTCGAAGATTGCGGCGAGGTTGCCGGGAAGAACGGACAATGAGATAAAGAATCACTGGAACACGCACATAAAGAAGAAGCTCATCAAGATGGGGATCGATCCAGTAACACACGAACCCCTTCAAAAACAGCCAGAGGATAAAAAAAACGAGTGCCTTAACCCCAACAACAACAAGAAGACCAAAAAAACGGCGGAAAGCTCGGCCGGAAACCACCATTGCAAGGAGGAAAACGAGAGCGTTATGGATGACTCAAGCTCCCCGGCGAAGACGGAGAACAGTAGCTCCGTGAACACGGACGAGTCGCTTCTTCTAGACAACCTCATAAACACTAGTTTCTGGATTGAAGAAGAAGCTCTTTGGAACAACAACGACAACAACAACCTAGGTGGACATGGATATGGAGGCAATTTTTCATGGGAAGAGAATTGGTCTTGGCTGCATGAGTGTGAGGATTTTGGTATCCATGATTTCGGTTTTGACTGTTTCAATGATTTTGAATTAAACGCCATCAACACAACAGAAACGGAAGGAAAGCACTAG

mRNA sequence

ATGGGGAGGCAACCTTGCTGTGACAAACTTGGAGTTAAAAAAGGCCCTTGGACTGCTGACGAAGACAACAAACTCATCAACTTTATACTCACTAATGGGCAGTGCTGTTGGCGGGCCGTCCCTAAGCTCGCTGGCCTCCGCCGTTGTGGCAAAAGCTGCCGCCTTCGTTGGACTAATTATCTCCGCCCTGATCTTAAGCGAGGCCTTCTCTCTGAAGCTGAAGAGCAATTGGTGATTGATCTTCATGCTCGTCTGGGAAACAGATGGTCGAAGATTGCGGCGAGGTTGCCGGGAAGAACGGACAATGAGATAAAGAATCACTGGAACACGCACATAAAGAAGAAGCTCATCAAGATGGGGATCGATCCAGTAACACACGAACCCCTTCAAAAACAGCCAGAGGATAAAAAAAACGAGTGCCTTAACCCCAACAACAACAAGAAGACCAAAAAAACGGCGGAAAGCTCGGCCGGAAACCACCATTGCAAGGAGGAAAACGAGAGCGTTATGGATGACTCAAGCTCCCCGGCGAAGACGGAGAACAGTAGCTCCGTGAACACGGACGAGTCGCTTCTTCTAGACAACCTCATAAACACTAGTTTCTGGATTGAAGAAGAAGCTCTTTGGAACAACAACGACAACAACAACCTAGGTGGACATGGATATGGAGGCAATTTTTCATGGGAAGAGAATTGGTCTTGGCTGCATGAGTGTGAGGATTTTGGTATCCATGATTTCGGTTTTGACTGTTTCAATGATTTTGAATTAAACGCCATCAACACAACAGAAACGGAAGGAAAGCACTAG

Coding sequence (CDS)

ATGGGGAGGCAACCTTGCTGTGACAAACTTGGAGTTAAAAAAGGCCCTTGGACTGCTGACGAAGACAACAAACTCATCAACTTTATACTCACTAATGGGCAGTGCTGTTGGCGGGCCGTCCCTAAGCTCGCTGGCCTCCGCCGTTGTGGCAAAAGCTGCCGCCTTCGTTGGACTAATTATCTCCGCCCTGATCTTAAGCGAGGCCTTCTCTCTGAAGCTGAAGAGCAATTGGTGATTGATCTTCATGCTCGTCTGGGAAACAGATGGTCGAAGATTGCGGCGAGGTTGCCGGGAAGAACGGACAATGAGATAAAGAATCACTGGAACACGCACATAAAGAAGAAGCTCATCAAGATGGGGATCGATCCAGTAACACACGAACCCCTTCAAAAACAGCCAGAGGATAAAAAAAACGAGTGCCTTAACCCCAACAACAACAAGAAGACCAAAAAAACGGCGGAAAGCTCGGCCGGAAACCACCATTGCAAGGAGGAAAACGAGAGCGTTATGGATGACTCAAGCTCCCCGGCGAAGACGGAGAACAGTAGCTCCGTGAACACGGACGAGTCGCTTCTTCTAGACAACCTCATAAACACTAGTTTCTGGATTGAAGAAGAAGCTCTTTGGAACAACAACGACAACAACAACCTAGGTGGACATGGATATGGAGGCAATTTTTCATGGGAAGAGAATTGGTCTTGGCTGCATGAGTGTGAGGATTTTGGTATCCATGATTTCGGTTTTGACTGTTTCAATGATTTTGAATTAAACGCCATCAACACAACAGAAACGGAAGGAAAGCACTAG

Protein sequence

MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMGIDPVTHEPLQKQPEDKKNECLNPNNNKKTKKTAESSAGNHHCKEENESVMDDSSSPAKTENSSSVNTDESLLLDNLINTSFWIEEEALWNNNDNNNLGGHGYGGNFSWEENWSWLHECEDFGIHDFGFDCFNDFELNAINTTETEGKH

Homology

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BLAST of Carg02466 vs. NCBI nr
Match: XP_022958078.1 (protein ODORANT1-like [Cucurbita moschata])

HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104
Identity = 264/268 (98.51%), Postives = 265/268 (98.88%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTH+KKKLIKMG
Sbjct: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHLKKKLIKMG 120

Query: 121 IDPVTHEPLQKQPEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPVTHEPLQKQPEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPVTHEPLQKQPEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHECED 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GYGGNFSWEENWSWLHECED
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-GYGGNFSWEENWSWLHECED 240

Query: 241 FGIHDFGFDCFNDFELNAINTTETEGKH 269
           FGIHDFGFDCFNDFELNAINTTETEGKH
Sbjct: 241 FGIHDFGFDCFNDFELNAINTTETEGKH 267

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BLAST of Carg02466 vs. NCBI nr
Match: XP_022996327.1 (protein ODORANT1-like [Cucurbita maxima])

HSP 1 Score: 386.3 bits (991), Expect = 8.2e-104
Identity = 260/268 (97.01%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPVTHEPLQKQPEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           +DPVTHEPLQKQPE++KNEC NP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 MDPVTHEPLQKQPENQKNECHNP--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHECED 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHECED
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHECED 240

Query: 241 FGIHDFGFDCFNDFELNAINTTETEGKH 269
           FGIHDFGFDC +DFELNAINTTETEGKH
Sbjct: 241 FGIHDFGFDCLDDFELNAINTTETEGKH 266

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BLAST of Carg02466 vs. NCBI nr
Match: XP_023533833.1 (protein ODORANT1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.3 bits (978), Expect = 2.6e-102
Identity = 236/268 (88.06%), Postives = 237/268 (88.43%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPVTHEPLQKQPEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPVTHEPLQKQ ED+KNECLN     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPVTHEPLQKQQEDQKNECLN-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHECED 240
           XXXXXXXXXXXXXXX                         GYGGNFSWEENWSWLHECED
Sbjct: 181 XXXXXXXXXXXXXXXLLLDNLINTSFWIEEEALWDNNNPSGYGGNFSWEENWSWLHECED 240

Query: 241 FGIHDFGFDCFNDFELNAINTTETEGKH 269
           FGIHDFGFDCFNDFELNAINTTETEGKH
Sbjct: 241 FGIHDFGFDCFNDFELNAINTTETEGKH 263

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BLAST of Carg02466 vs. NCBI nr
Match: XP_011654787.1 (PREDICTED: protein ODORANT1-like [Cucumis sativus] >KGN50209.1 hypothetical protein Csa_5G160120 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 234/268 (87.31%), Postives = 241/268 (89.93%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTADED KLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTADEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL++ EEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLTDTEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPVTHEPLQKQPEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPVTHEP+QKQPE++KN     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPVTHEPIQKQPENEKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHECED 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX              G NF WEEN SWL +CED
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPI----------SNGANFLWEENCSWLLDCED 240

Query: 241 FGIHDFGFDCFNDFELNAINTTETEGKH 269
           FGIHDFGFDCFNDFE+ AINTTE EGKH
Sbjct: 241 FGIHDFGFDCFNDFEIKAINTTEMEGKH 258

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BLAST of Carg02466 vs. NCBI nr
Match: XP_008437136.1 (PREDICTED: protein ODORANT1-like [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 3.7e-88
Identity = 220/268 (82.09%), Postives = 227/268 (84.70%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTADED KLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTADEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL++ EEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLTDTEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPVTHEPLQKQPEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPVTHEP+QKQPE++       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPVTHEPIQKQPENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHECED 240
           XXXXXXXXXXXXXXXX                          G NF WEEN SWL +CED
Sbjct: 181 XXXXXXXXXXXXXXXXWIDEEALWNNSPPI----------SNGANFLWEENCSWLLDCED 240

Query: 241 FGIHDFGFDCFNDFELNAINTTETEGKH 269
           FGIHDFGFDCFNDFE+ AINTTE EGKH
Sbjct: 241 FGIHDFGFDCFNDFEIKAINTTEMEGKH 258

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BLAST of Carg02466 vs. TAIR10
Match: AT4G22680.1 (myb domain protein 85)

HSP 1 Score: 268.1 bits (684), Expect = 5.9e-72
Identity = 118/138 (85.51%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWT +ED KLINFILTNG CCWRA+PKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTVEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLS  EEQLVIDLHA LGN+WSKIA+RLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSHDEEQLVIDLHANLGNKWSKIASRLPGRTDNEIKNHWNTHIKKKLLKMG 120

Query: 121 IDPVTHEPLQKQPEDKKN 139
           IDP+TH+PL ++P +  N
Sbjct: 121 IDPMTHQPLNQEPSNIDN 138

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BLAST of Carg02466 vs. TAIR10
Match: AT4G12350.1 (myb domain protein 42)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-70
Identity = 119/131 (90.84%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKL VKKGPWTA+ED KLINFILTNG CCWRA+PKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLS+AEEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKL+KM 
Sbjct: 61  LRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKME 120

Query: 121 IDPVTHEPLQK 132
           IDP TH+PL K
Sbjct: 121 IDPSTHQPLNK 131

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BLAST of Carg02466 vs. TAIR10
Match: AT1G66230.1 (myb domain protein 20)

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-68
Identity = 115/145 (79.31%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDK+G+KKGPWTA+ED KLINFILTNGQCCWRAVPKL+GL RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLS+ EE++VIDLH++LGNRWSKIA+ LPGRTDNEIKNHWNTHIKKKL KMG
Sbjct: 61  LRPDLKRGLLSDYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPVTHEPL---QKQPEDKKNECLN 143
           IDP+TH+PL   +K+ E+   +  N
Sbjct: 121 IDPLTHKPLSIVEKEDEEPLKKLQN 145

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BLAST of Carg02466 vs. TAIR10
Match: AT5G16600.1 (myb domain protein 43)

HSP 1 Score: 251.9 bits (642), Expect = 4.4e-67
Identity = 111/132 (84.09%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDK+G+KKGPWT +ED KLINFILTNG CCWRA+PKL+GL RCGKSCRLRW NY
Sbjct: 1   MGRQPCCDKVGLKKGPWTIEEDKKLINFILTNGHCCWRALPKLSGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLSE EEQ VI+LHA+LGNRWSKIA+ LPGRTDNEIKNHWNTHIKKKL KMG
Sbjct: 61  LRPDLKRGLLSEYEEQKVINLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPVTHEPLQKQ 133
           IDP+TH+PL +Q
Sbjct: 121 IDPLTHKPLSEQ 132

[Close]

BLAST of Carg02466 vs. TAIR10
Match: AT5G62320.1 (myb domain protein 99)

HSP 1 Score: 224.9 bits (572), Expect = 5.7e-59
Identity = 100/147 (68.03%), Postives = 118/147 (80.27%), Query Frame = 0


Query: 2   GRQPCCDKLGVKKGPWTADEDNKLINFILTNGQC-------CWRAVPKLAGLRRCGKSCR 61
           GR+PCCD++G++KGPWT +ED KL++F+   G C       CWR VPKLAGLRRCGKSCR
Sbjct: 3   GRKPCCDEVGLRKGPWTVEEDGKLVDFLRARGNCGGGGGGWCWRDVPKLAGLRRCGKSCR 62

Query: 62  LRWTNYLRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKK 121
           LRWTNYLRPDLKRGL +E E QLVIDLHARLGNRWSKIA  LPGRTDN+IKN+WNTHIK+
Sbjct: 63  LRWTNYLRPDLKRGLFTEEEIQLVIDLHARLGNRWSKIAVELPGRTDNDIKNYWNTHIKR 122

Query: 122 KLIKMGIDPVTHEPLQKQPEDKKNECL 142
           KLI+MGIDP TH    +Q  +++   L
Sbjct: 123 KLIRMGIDPNTHRRFDQQKVNEEETIL 149

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BLAST of Carg02466 vs. Swiss-Prot
Match: sp|Q50EX6|ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida OX=4102 GN=ODO1 PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 8.7e-73
Identity = 122/132 (92.42%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTA+ED KLI+FILTNGQCCWRAVPKLAGL+RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLS+AEE+LVIDLH+RLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMG 120

Query: 121 IDPVTHEPLQKQ 133
           IDPVTHEPL+K+
Sbjct: 121 IDPVTHEPLKKE 132

[Close]

BLAST of Carg02466 vs. Swiss-Prot
Match: sp|Q9C7U7|MYB20_ARATH (Transcription factor MYB20 OS=Arabidopsis thaliana OX=3702 GN=MYB20 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.5e-67
Identity = 115/145 (79.31%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDK+G+KKGPWTA+ED KLINFILTNGQCCWRAVPKL+GL RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLS+ EE++VIDLH++LGNRWSKIA+ LPGRTDNEIKNHWNTHIKKKL KMG
Sbjct: 61  LRPDLKRGLLSDYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPVTHEPL---QKQPEDKKNECLN 143
           IDP+TH+PL   +K+ E+   +  N
Sbjct: 121 IDPLTHKPLSIVEKEDEEPLKKLQN 145

[Close]

BLAST of Carg02466 vs. Swiss-Prot
Match: sp|P80073|MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens OX=3218 GN=PP2 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.1e-57
Identity = 93/130 (71.54%), Postives = 114/130 (87.69%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGR+PCC+K+G+++GPWT++ED KL++ I  NG  CWRA+PKLAGL RCGKSCRLRWTNY
Sbjct: 1   MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRG+ SEAEE L++DLHA LGNRWS+IAA+LPGRTDNEIKN+WNT +KK+L   G
Sbjct: 61  LRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQG 120

Query: 121 IDPVTHEPLQ 131
           +DP TH PL+
Sbjct: 121 LDPNTHLPLE 130

[Close]

BLAST of Carg02466 vs. Swiss-Prot
Match: sp|Q9M0J5|MYB41_ARATH (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.1e-54
Identity = 92/128 (71.88%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGR PCCDK GVKKGPWTA+ED KLI++I  +G   WR +PK AGL RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPD+KRG  S  EE+ +I LH+ +GN+WS IAARLPGRTDNEIKNHWNTHI+K+L++ G
Sbjct: 61  LRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRLVRSG 120

Query: 121 IDPVTHEP 129
           IDPVTH P
Sbjct: 121 IDPVTHSP 128

[Close]

BLAST of Carg02466 vs. Swiss-Prot
Match: sp|Q9LXF1|MYB16_ARATH (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-53
Identity = 91/133 (68.42%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGR PCCDKLG+KKGPWT +ED KL+ +I  +G   WR++P+ AGL RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPD+KRG  +  EEQ +I LHA LGNRWS IA  LP RTDNEIKN+WNTH+KK+L+KMG
Sbjct: 61  LRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMG 120

Query: 121 IDPVTHEPLQKQP 134
           IDPVTH+P  + P
Sbjct: 121 IDPVTHKPKNETP 133

[Close]

BLAST of Carg02466 vs. TrEMBL
Match: tr|A0A0A0KMT4|A0A0A0KMT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160120 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 7.6e-90
Identity = 234/268 (87.31%), Postives = 241/268 (89.93%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTADED KLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTADEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL++ EEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLTDTEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPVTHEPLQKQPEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPVTHEP+QKQPE++KN     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPVTHEPIQKQPENEKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHECED 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX              G NF WEEN SWL +CED
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPI----------SNGANFLWEENCSWLLDCED 240

Query: 241 FGIHDFGFDCFNDFELNAINTTETEGKH 269
           FGIHDFGFDCFNDFE+ AINTTE EGKH
Sbjct: 241 FGIHDFGFDCFNDFEIKAINTTEMEGKH 258

[Close]

BLAST of Carg02466 vs. TrEMBL
Match: tr|A0A1S3ATV5|A0A1S3ATV5_CUCME (protein ODORANT1-like OS=Cucumis melo OX=3656 GN=LOC103482649 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.5e-88
Identity = 220/268 (82.09%), Postives = 227/268 (84.70%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTADED KLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTADEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL++ EEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLTDTEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPVTHEPLQKQPEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPVTHEP+QKQPE++       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPVTHEPIQKQPENEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHECED 240
           XXXXXXXXXXXXXXXX                          G NF WEEN SWL +CED
Sbjct: 181 XXXXXXXXXXXXXXXXWIDEEALWNNSPPI----------SNGANFLWEENCSWLLDCED 240

Query: 241 FGIHDFGFDCFNDFELNAINTTETEGKH 269
           FGIHDFGFDCFNDFE+ AINTTE EGKH
Sbjct: 241 FGIHDFGFDCFNDFEIKAINTTEMEGKH 258

[Close]

BLAST of Carg02466 vs. TrEMBL
Match: tr|A0A0H4JCZ7|A0A0H4JCZ7_POPTO (MYB092 (Fragment) OS=Populus tomentosa OX=118781 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.2e-80
Identity = 169/270 (62.59%), Postives = 187/270 (69.26%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTA+ED KLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL+EAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKL+K G
Sbjct: 61  LRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKRG 120

Query: 121 IDPVTHEPLQKQ--PEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPVTHEPL K+  PE+  +   +   XXXXXXXXXXXXX    XXX             
Sbjct: 121 IDPVTHEPLHKEARPEESSSSHADILPXXXXXXXXXXXXXIVINXXXNPRSPTENSSSPE 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHEC 240
                                                    +   G  SWEEN++WL +C
Sbjct: 181 DSILLDSICNDEMLLNSLWVDEPPLVDASWNNIIPPDPANTNDDTGYPSWEENYTWLSDC 240

Query: 241 EDFGIHDFGFDCFNDFELNAINTTETEGKH 269
           +DFG+HDFG +CF+  EL+A++T E E KH
Sbjct: 241 QDFGVHDFGLECFDSMELSALSTLEMEHKH 270

[Close]

BLAST of Carg02466 vs. TrEMBL
Match: tr|B9N3N5|B9N3N5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G118800v3 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.2e-79
Identity = 191/270 (70.74%), Postives = 207/270 (76.67%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTA+ED KLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL+EAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKL+K G
Sbjct: 61  LRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKRG 120

Query: 121 IDPVTHEPLQKQ--PEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPVTHEPL K+  PE+        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPVTHEPLHKEARPEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHEC 240
           XXX                                      +   G  SWEEN++WL +C
Sbjct: 181 XXXLLDSICNDEMLLNSLWMEEPPLVDASWNNIIPPAAANTNDDTGYPSWEENYTWLSDC 240

Query: 241 EDFGIHDFGFDCFNDFELNAINTTETEGKH 269
           +DFG+HDFG +CF+  EL+A++T E E KH
Sbjct: 241 QDFGVHDFGLECFDSMELSALSTLEMEHKH 270

[Close]

BLAST of Carg02466 vs. TrEMBL
Match: tr|V4TPP5|V4TPP5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021695mg PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.7e-79
Identity = 193/268 (72.01%), Postives = 207/268 (77.24%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTADEDNKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTA+ED KLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL+EAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMG 120

Query: 121 IDPVTHEPLQKQPEDKKNECLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           IDPVTHEPL K+ + + N  L  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 IDPVTHEPLHKETKAEDN-LLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHGYGGNFSWEENWSWLHECED 240
           XX                                      G    +  ++N SWL +C+D
Sbjct: 181 XXNICNDDCLLNSLWIDEPPLIDAPWNISNQPVEENINETGLPVAWDHQDNCSWLLDCQD 240

Query: 241 FGIHDFGFDCFNDFELNAINTTETEGKH 269
           FGIHDFG DCF+DFELN +N  E  G+H
Sbjct: 241 FGIHDFGIDCFSDFELNTLNNLEVGGRH 267

The following BLAST results are available for this feature:

BLAST of Carg02466 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958078.1	1.7e-104	98.51	protein ODORANT1-like [Cucurbita moschata]	[more]
XP_022996327.1	8.2e-104	97.01	protein ODORANT1-like [Cucurbita maxima]	[more]
XP_023533833.1	2.6e-102	88.06	protein ODORANT1-like [Cucurbita pepo subsp. pepo]	[more]
XP_011654787.1	1.2e-89	87.31	PREDICTED: protein ODORANT1-like [Cucumis sativus] >KGN50209.1 hypothetical prot...	[more]
XP_008437136.1	3.7e-88	82.09	PREDICTED: protein ODORANT1-like [Cucumis melo]	[more]

BLAST of Carg02466 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22680.1	5.9e-72	85.51	myb domain protein 85	[more]
AT4G12350.1	1.1e-70	90.84	myb domain protein 42	[more]
AT1G66230.1	1.4e-68	79.31	myb domain protein 20	[more]
AT5G16600.1	4.4e-67	84.09	myb domain protein 43	[more]
AT5G62320.1	5.7e-59	68.03	myb domain protein 99	[more]

BLAST of Carg02466 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q50EX6\|ODO1_PETHY	8.7e-73	92.42	Protein ODORANT1 OS=Petunia hybrida OX=4102 GN=ODO1 PE=2 SV=1	[more]
sp\|Q9C7U7\|MYB20_ARATH	2.5e-67	79.31	Transcription factor MYB20 OS=Arabidopsis thaliana OX=3702 GN=MYB20 PE=2 SV=1	[more]
sp\|P80073\|MYB2_PHYPA	5.1e-57	71.54	Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens OX=3218 GN=PP2 PE...	[more]
sp\|Q9M0J5\|MYB41_ARATH	4.1e-54	71.88	Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1	[more]
sp\|Q9LXF1\|MYB16_ARATH	1.2e-53	68.42	Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1	[more]

BLAST of Carg02466 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMT4\|A0A0A0KMT4_CUCSA	7.6e-90	87.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160120 PE=4 SV=1	[more]
tr\|A0A1S3ATV5\|A0A1S3ATV5_CUCME	2.5e-88	82.09	protein ODORANT1-like OS=Cucumis melo OX=3656 GN=LOC103482649 PE=4 SV=1	[more]
tr\|A0A0H4JCZ7\|A0A0H4JCZ7_POPTO	7.2e-80	62.59	MYB092 (Fragment) OS=Populus tomentosa OX=118781 PE=2 SV=1	[more]
tr\|B9N3N5\|B9N3N5_POPTR	1.2e-79	70.74	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G118800v3 PE=...	[more]
tr\|V4TPP5\|V4TPP5_9ROSI	2.7e-79	72.01	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021695mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02466-RA	Carg02466-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 e-value: 5.5E-15 score: 65.8 coord: 13..63 e-value: 3.9E-12 score: 56.3
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 6.2E-14 score: 51.8 coord: 70..111 e-value: 6.4E-15 score: 54.9
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 71..112 e-value: 1.79011E-10 score: 54.1186
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 1.3702E-7 score: 46.0294
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 71..116 e-value: 1.3E-19 score: 71.9
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 12..67 e-value: 4.1E-17 score: 63.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..144
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..209
None	No IPR available	PANTHER	PTHR10641:SF503	SUBFAMILY NOT NAMED	coord: 1..209
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..61 score: 13.882
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 62..116 score: 27.321
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 11..108

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02466	Cla011548	Watermelon (97103) v1	carwmB0926
Carg02466	Csa5G160120	Cucumber (Chinese Long) v2	carcuB0940
Carg02466	MELO3C005569	Melon (DHL92) v3.5.1	carmeB0903
Carg02466	ClCG01G003720	Watermelon (Charleston Gray)	carwcgB0899
Carg02466	CSPI05G06450	Wild cucumber (PI 183967)	carcpiB0962
Carg02466	Cucsa.302180	Cucumber (Gy14) v1	carcgyB1043
Carg02466	CmaCh02G015220	Cucurbita maxima (Rimu)	carcmaB1268
Carg02466	CmaCh15G011550	Cucurbita maxima (Rimu)	carcmaB1261
Carg02466	CmoCh02G015660	Cucurbita moschata (Rifu)	carcmoB1237
Carg02466	CmoCh15G012170	Cucurbita moschata (Rifu)	carcmoB1230
Carg02466	Lsi09G003860	Bottle gourd (USVL1VR-Ls)	carlsiB837
Carg02466	Cp4.1LG13g02200	Cucurbita pepo (Zucchini)	carcpeB1271
Carg02466	Cp4.1LG05g02600	Cucurbita pepo (Zucchini)	carcpeB1282
Carg02466	CsGy5G003750	Cucumber (Gy14) v2	carcgybB0913
Carg02466	MELO3C005569.2	Melon (DHL92) v3.6.1	carmedB0910
Carg02466	CsaV3_5G003860	Cucumber (Chinese Long) v3	carcucB0964
Carg02466	Cla97C01G003860	Watermelon (97103) v2	carwmbB0963
Carg02466	Bhi12G000372	Wax gourd	carwgoB1064

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02466	Cucumber (Gy14) v2	carcgybB0906
Carg02466	Cucumber (Gy14) v1	carcgyB1042
Carg02466	Cucurbita maxima (Rimu)	carcmaB1264
Carg02466	Cucurbita pepo (Zucchini)	carcpeB1272
Carg02466	Wild cucumber (PI 183967)	carcpiB0955
Carg02466	Cucumber (Chinese Long) v2	carcuB0933
Carg02466	Cucumber (Chinese Long) v3	carcucB0956
Carg02466	Bottle gourd (USVL1VR-Ls)	carlsiB841
Carg02466	Melon (DHL92) v3.5.1	carmeB0911
Carg02466	Melon (DHL92) v3.6.1	carmedB0918
Carg02466	Watermelon (Charleston Gray)	carwcgB0903
Carg02466	Watermelon (97103) v1	carwmB0920
Carg02466	Watermelon (97103) v2	carwmbB0969