Cucsa.300850 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.300850
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionAuxin-responsive protein
Locationscaffold02931 : 479770 .. 481075 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCATAATATTTACTACACCAAATCCAAATTCAAGGATGACCCAGGTGGCAGCTAAGGGATTAGACCTCGAGATCACCGAGCTTCGGCTAGGACTTCCAGGCGACTGTTGCAGTTTAATTTCGACGAGTAAGAACAATGAGAAGAAAAGGGTTTTCTCTGAGGTGGAAGTAGAAGACAAGAGTCGGAGCAAAGGTGAGGATGAGGGACGGAGGAAGCAGGTGGTGGGGTGGCCACCAGTGTGCTCATACCGACGGAGGAATAGCTTCAAGGGAAAGGGAGAGCAGTGTGAGAGTGAAGAAATAATGAATATGGGGATGAAGAAACAGATGTATGTGAAAGTGAGCTTTGAAGGAACACCTTTTTTAAGGAAGGTTGATTTGGGAATGGTGAAAGGATATGGAGATCTTGTTGGAGCAATGGAGAAGCTGTTTGGGAGTCCAATTGGTTGCTATGAATATACTGTCACTTATGAAGATAGAGATGGAGATTGGATGTTGGTTGGGGATGTGCCTTGGAAGTAAGTCTCTCTTTTGATCAGAACCCTAATAATAATTCTCTTTTCATTTCAATGGTTTAAGGATTTGAACTCATGATCTATACGTTTTAAATTGTATATATTTTGTTTTCTCTTACAACTTCTTTGAACACTCAAATTCTTAGCAAAATTTATAAAAAAAATGGTTTTAAAAAATTTGATGAACAATATATAATACATCGATGGAATCAATAAGTTGAAGTAGTTTATAAGTTTAATTTAAAAAACAAAAAACATAAGAAAAAGCCTAAATGAAAAGGCTATGGTCTTATAGATTTATATTTATATTTGAAGTTTTACATGTAAACTCTGGGTTGTGATACTTAGAATTTAATTGATTATATTTGTAGGATGTTCATTGAATCATGCAAGAGATTGAGGATAATGAAGAAAACAGAAGGCAAGGGATCAGAGATGAACTCATTGAGCCAATAAATTAAAGAGCTTCTTCAAGAGAGGATATCTCAAAACATAGAATAACAAAGCCTCATGGGAAGAAGCACTTTCTTTCTTTGTGTTTATTTGATTTGATTGTTTTTCTTTTTTTTTGGTTCATTTGCCATAAATATTTCAGATTTCAGATTGATGGTTGATAGATACCTTAACTAGCTAAGGTAATTTATGTAGAAGAGATGTATCTCTCAAATGATTCAACTACTCTATTTTTTTTTTAATTTGTACTTATTAACTTTTTGTAATTGTACGGTAGTTCAAATTCCCAATCAATCCAATATATATGGAATAATAATATTAGTAAATTTGAGGAAGT

mRNA sequence

CTTCATAATATTTACTACACCAAATCCAAATTCAAGGATGACCCAGGTGGCAGCTAAGGGATTAGACCTCGAGATCACCGAGCTTCGGCTAGGACTTCCAGGCGACTGTTGCAGTTTAATTTCGACGAGTAAGAACAATGAGAAGAAAAGGGTTTTCTCTGAGGTGGAAGTAGAAGACAAGAGTCGGAGCAAAGGTGAGGATGAGGGACGGAGGAAGCAGGTGGTGGGGTGGCCACCAGTGTGCTCATACCGACGGAGGAATAGCTTCAAGGGAAAGGGAGAGCAGTGTGAGAGTGAAGAAATAATGAATATGGGGATGAAGAAACAGATGTATGTGAAAGTGAGCTTTGAAGGAACACCTTTTTTAAGGAAGGTTGATTTGGGAATGGTGAAAGGATATGGAGATCTTGTTGGAGCAATGGAGAAGCTGTTTGGGAGTCCAATTGGTTGCTATGAATATACTGTCACTTATGAAGATAGAGATGGAGATTGGATGTTGGTTGGGGATGTGCCTTGGAAGATGTTCATTGAATCATGCAAGAGATTGAGGATAATGAAGAAAACAGAAGGCAAGGGATCAGAGATGAACTCATTGAGCCAATAAATTAAAGAGCTTCTTCAAGAGAGGATATCTCAAAACATAGAATAACAAAGCCTCATGGGAAGAAGCACTTTCTTTCTTTGTGTTTATTTGATTTGATTGTTTTTCTTTTTTTTTGGTTCATTTGCCATAAATATTTCAGATTTCAGATTGATGGTTGATAGATACCTTAACTAGCTAAGGTAATTTATGTAGAAGAGATGTATCTCTCAAATGATTCAACTACTCTATTTTTTTTTTAATTTGTACTTATTAACTTTTTGTAATTGTACGGTAGTTCAAATTCCCAATCAATCCAATATATATGGAATAATAATATTAGTAAATTTGAGGAAGT

Coding sequence (CDS)

ATGACCCAGGTGGCAGCTAAGGGATTAGACCTCGAGATCACCGAGCTTCGGCTAGGACTTCCAGGCGACTGTTGCAGTTTAATTTCGACGAGTAAGAACAATGAGAAGAAAAGGGTTTTCTCTGAGGTGGAAGTAGAAGACAAGAGTCGGAGCAAAGGTGAGGATGAGGGACGGAGGAAGCAGGTGGTGGGGTGGCCACCAGTGTGCTCATACCGACGGAGGAATAGCTTCAAGGGAAAGGGAGAGCAGTGTGAGAGTGAAGAAATAATGAATATGGGGATGAAGAAACAGATGTATGTGAAAGTGAGCTTTGAAGGAACACCTTTTTTAAGGAAGGTTGATTTGGGAATGGTGAAAGGATATGGAGATCTTGTTGGAGCAATGGAGAAGCTGTTTGGGAGTCCAATTGGTTGCTATGAATATACTGTCACTTATGAAGATAGAGATGGAGATTGGATGTTGGTTGGGGATGTGCCTTGGAAGATGTTCATTGAATCATGCAAGAGATTGAGGATAATGAAGAAAACAGAAGGCAAGGGATCAGAGATGAACTCATTGAGCCAATAA

Protein sequence

MTQVAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRKQVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKGYGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKGSEMNSLSQ*
Homology
[Close]
BLAST of Cucsa.300850 vs. Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-45
Identity = 104/195 (53.33%), Postives = 127/195 (65.13%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVE--VEDKSRSKG----EDEG 63
           +A +GL LEITELRLGLP     +   +K NEKKR FSE++  V D++ S G    + E 
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 64  RRKQVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGM 123
            + QVVGWPPVCSYR++NS             MN G  K MYVKVS +G PFLRK+DLG+
Sbjct: 61  NKSQVVGWPPVCSYRKKNS-------------MNEGASK-MYVKVSMDGAPFLRKIDLGL 120

Query: 124 VKGYGDLVGAMEKLFGSPIGCY------------EYTVTYEDRDGDWMLVGDVPWKMFIE 181
            KGY DL  A++KLFG    CY            E+   YED+DGDWMLVGDVPW+MF+E
Sbjct: 121 HKGYSDLALALDKLFG----CYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFME 177

[Close]
BLAST of Cucsa.300850 vs. Swiss-Prot
Match: AX22A_VIGRR (Auxin-induced protein 22A OS=Vigna radiata var. radiata GN=AUX22A PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.2e-43
Identity = 103/196 (52.55%), Postives = 125/196 (63.78%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKK--RVFSEVE-VEDKSRSKGEDEGRR- 63
           +A +GL LEITELRLGLP D   +   +KN EKK  RVFSE++ V D++ S G    R+ 
Sbjct: 1   MAKEGLGLEITELRLGLP-DAEHVAVANKNGEKKNKRVFSEIDDVGDENSSSGGGGDRKM 60

Query: 64  ---KQVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLG 123
               QVVGWPPVCSYR++NS               +    +MYVKVS +G PFLRK+DLG
Sbjct: 61  ENKNQVVGWPPVCSYRKKNS---------------VNEASKMYVKVSMDGAPFLRKMDLG 120

Query: 124 MVKGYGDLVGAMEKLFGSPIGCY------------EYTVTYEDRDGDWMLVGDVPWKMFI 181
           M KGY DL  A+EKLFG    CY            E+   YED+DGDWMLVGDVPW+MF+
Sbjct: 121 MHKGYSDLAFALEKLFG----CYGMVEALKNVENGEHVPIYEDKDGDWMLVGDVPWEMFM 176

[Close]
BLAST of Cucsa.300850 vs. Swiss-Prot
Match: AX22C_VIGRR (Auxin-induced protein 22C OS=Vigna radiata var. radiata GN=AUX22C PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.1e-41
Identity = 92/188 (48.94%), Postives = 117/188 (62.23%), Query Frame = 1 

Query: 9   LDLEITELRLGLPGDCC-SLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRKQVVGWPP 68
           L LEITELRLGLPG    +     KN  KKRVFS++E E+ S  +   +  + QVVGWPP
Sbjct: 6   LGLEITELRLGLPGAGGENNTDKDKNKNKKRVFSDIEGENSSSEEDGKKETKNQVVGWPP 65

Query: 69  VCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKGYGDLVGA 128
           VCSYR++N+                  + ++YVKVS +G PFLRK+DL M KGY DL  A
Sbjct: 66  VCSYRKKNTVN----------------EPKLYVKVSMDGAPFLRKIDLAMHKGYSDLAFA 125

Query: 129 MEKLFGSPIGCY------------EYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKK 184
           ++K FG    CY            E+   YED+DGDWMLVGDVPW+MF ESCKRLRIMK+
Sbjct: 126 LDKFFG----CYGICEALKDAENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKR 173

[Close]
BLAST of Cucsa.300850 vs. Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.5e-39
Identity = 95/192 (49.48%), Postives = 120/192 (62.50%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVE--VEDKSRSKGEDE-GRRK 63
           +A +GL LEITELRLGL           K NEKKR+FSE++  VE+   S       ++ 
Sbjct: 1   MAREGLGLEITELRLGLS------CGEPKKNEKKRMFSEIDGGVEENGGSGDRKSVDKKN 60

Query: 64  QVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKG 123
           QVVGWPPVCSYR++N              MN G K  MY+KVS +G P+LRK+DL + KG
Sbjct: 61  QVVGWPPVCSYRKKN--------------MNEGSK--MYMKVSMDGAPYLRKIDLCLHKG 120

Query: 124 YGDLVGAMEKLFG---------SPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLR 183
           Y +L  A+EKLF              C E+   YED+DGDWMLVGDVPW+MFIESCKRLR
Sbjct: 121 YLELALALEKLFDCCGIEEALKDAENC-EHVPIYEDKDGDWMLVGDVPWEMFIESCKRLR 169

[Close]
BLAST of Cucsa.300850 vs. Swiss-Prot
Match: IAA19_ARATH (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19 PE=1 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 9.1e-37
Identity = 89/199 (44.72%), Postives = 114/199 (57.29%), Query Frame = 1 

Query: 7   KGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEG--------- 66
           +GL LEITELRLGLPG        ++   KKR F+E+ +     +  + E          
Sbjct: 4   EGLGLEITELRLGLPGR-----DVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDA 63

Query: 67  --------RRKQVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPF 126
                    + QVVGWPPVCSYR++NS       C+      +G+    YVKVS +G P+
Sbjct: 64  EKVNDSPAAKSQVVGWPPVCSYRKKNS-------CKEASTTKVGLG---YVKVSMDGVPY 123

Query: 127 LRKVDLGMVKGYGDLVGAMEKLFG-SPIGCY-------EYTVTYEDRDGDWMLVGDVPWK 181
           LRK+DLG  +GY DL  A++KLFG   IG         EY   YED+DGDWML GDVPW 
Sbjct: 124 LRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWG 183

[Close]
BLAST of Cucsa.300850 vs. TrEMBL
Match: Q9SSY3_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=CsIAA1 PE=2 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 7.1e-105
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1 

Query: 1   MTQVAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRK 60
           MTQVAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRK
Sbjct: 1   MTQVAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRK 60

Query: 61  QVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKG 120
           QVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKG
Sbjct: 61  QVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKG 120

Query: 121 YGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKG 180
           YGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKG
Sbjct: 121 YGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKG 180

Query: 181 SEMNSLSQ 189
           SEMNSLSQ
Sbjct: 181 SEMNSLSQ 188

[Close]
BLAST of Cucsa.300850 vs. TrEMBL
Match: A0A0A0L852_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_3G516540 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.6e-49
Identity = 106/187 (56.68%), Postives = 132/187 (70.59%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEG--RRKQ 63
           +A+ G++LEITELRLGLPG      S+SKN EKKRVF E      + + G D+   +R Q
Sbjct: 1   MASNGVELEITELRLGLPGSGGCRTSSSKN-EKKRVFCE---SSSTNNDGGDQPFPKRNQ 60

Query: 64  VVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKGY 123
           VVGWPPVCS+RRR+S  G  +     E        ++YVK+S +G P+LRKVDLG  KGY
Sbjct: 61  VVGWPPVCSHRRRSSGSGNNKDLSETET------PKIYVKISMDGAPYLRKVDLGSHKGY 120

Query: 124 GDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKGS 183
            DLV AME LFGS +GC ++ + YEDRDGDWMLVGDVPW MF+ESCKRLRIMK+TE KG 
Sbjct: 121 SDLVVAMENLFGSALGCSDFVLIYEDRDGDWMLVGDVPWNMFVESCKRLRIMKRTEVKGF 177

Query: 184 EMNSLSQ 189
           E++  S+
Sbjct: 181 EIHVPSE 177

[Close]
BLAST of Cucsa.300850 vs. TrEMBL
Match: A0A0D2TJ06_GOSRA (Auxin-responsive protein OS=Gossypium raimondii GN=B456_009G132300 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.2e-44
Identity = 103/183 (56.28%), Postives = 123/183 (67.21%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEV-EVEDKSRSKGEDEGRRK-Q 63
           +A +GL LEITELRLGLPG        ++ NEKKRVFSE+ E E+  +S G  E + K Q
Sbjct: 1   MAKEGLGLEITELRLGLPG------GGTEKNEKKRVFSEISEEEENEKSNGPPELQSKSQ 60

Query: 64  VVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKGY 123
           VVGWPPVCSYR++NSF  K     S+           YVKVS +G PFLRK+DL + KGY
Sbjct: 61  VVGWPPVCSYRKKNSFGDKDGSKTSK----------FYVKVSMDGAPFLRKIDLALHKGY 120

Query: 124 GDLVGAMEKLFGSPI----GCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTE 181
            DL  A+EKLFG  +     C E+   YED+DGDWML GDVPW+MFIESCKRLRIMKK +
Sbjct: 121 SDLAKALEKLFGEALRDAESC-EFVPIYEDKDGDWMLAGDVPWEMFIESCKRLRIMKKAD 166

[Close]
BLAST of Cucsa.300850 vs. TrEMBL
Match: A0A0R0IQ29_SOYBN (Auxin-induced protein OS=Glycine max GN=GLYMA_08G207900 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.6e-43
Identity = 104/195 (53.33%), Postives = 127/195 (65.13%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVE--VEDKSRSKG----EDEG 63
           +A +GL LEITELRLGLP     +   +K NEKKR FSE++  V D++ S G    + E 
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 64  RRKQVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGM 123
            + QVVGWPPVCSYR++NS             MN G  K MYVKVS +G PFLRK+DLG+
Sbjct: 61  NKSQVVGWPPVCSYRKKNS-------------MNEGASK-MYVKVSMDGAPFLRKIDLGL 120

Query: 124 VKGYGDLVGAMEKLFGSPIGCY------------EYTVTYEDRDGDWMLVGDVPWKMFIE 181
            KGY DL  A++KLFG    CY            E+   YED+DGDWMLVGDVPW+MF+E
Sbjct: 121 HKGYSDLALALDKLFG----CYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFME 177

[Close]
BLAST of Cucsa.300850 vs. TrEMBL
Match: A0A0B2STH5_GLYSO (Auxin-induced protein OS=Glycine soja GN=glysoja_029217 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.6e-43
Identity = 104/195 (53.33%), Postives = 127/195 (65.13%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVE--VEDKSRSKG----EDEG 63
           +A +GL LEITELRLGLP     +   +K NEKKR FSE++  V D++ S G    + E 
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 64  RRKQVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGM 123
            + QVVGWPPVCSYR++NS             MN G  K MYVKVS +G PFLRK+DLG+
Sbjct: 61  NKSQVVGWPPVCSYRKKNS-------------MNEGASK-MYVKVSMDGAPFLRKIDLGL 120

Query: 124 VKGYGDLVGAMEKLFGSPIGCY------------EYTVTYEDRDGDWMLVGDVPWKMFIE 181
            KGY DL  A++KLFG    CY            E+   YED+DGDWMLVGDVPW+MF+E
Sbjct: 121 HKGYSDLALALDKLFG----CYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFME 177

[Close]
BLAST of Cucsa.300850 vs. TAIR10
Match: AT3G15540.1 (AT3G15540.1 indole-3-acetic acid inducible 19)

HSP 1 Score: 154.8 bits (390), Expect = 5.1e-38
Identity = 89/199 (44.72%), Postives = 114/199 (57.29%), Query Frame = 1 

Query: 7   KGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEG--------- 66
           +GL LEITELRLGLPG        ++   KKR F+E+ +     +  + E          
Sbjct: 4   EGLGLEITELRLGLPGR-----DVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDA 63

Query: 67  --------RRKQVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPF 126
                    + QVVGWPPVCSYR++NS       C+      +G+    YVKVS +G P+
Sbjct: 64  EKVNDSPAAKSQVVGWPPVCSYRKKNS-------CKEASTTKVGLG---YVKVSMDGVPY 123

Query: 127 LRKVDLGMVKGYGDLVGAMEKLFG-SPIGCY-------EYTVTYEDRDGDWMLVGDVPWK 181
           LRK+DLG  +GY DL  A++KLFG   IG         EY   YED+DGDWML GDVPW 
Sbjct: 124 LRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWG 183

[Close]
BLAST of Cucsa.300850 vs. TAIR10
Match: AT1G04240.1 (AT1G04240.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 153.3 bits (386), Expect = 1.5e-37
Identity = 88/195 (45.13%), Postives = 115/195 (58.97%), Query Frame = 1 

Query: 9   LDLEITELRLGLPG-----------DCCSLISTSKNNEKKRVFS---EVEVEDKSRSKGE 68
           ++L+ TELRLGLPG            CC       NN  KRV S   E E+E  SR    
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCC-------NNNNKRVLSTDTEKEIESSSRKTET 64

Query: 69  DEGRRKQVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVD 128
              R+ Q+VGWPPV SYR+ N+ + K  + E E        + +YVKVS +G P+LRK+D
Sbjct: 65  SPPRKAQIVGWPPVRSYRK-NNIQSKKNESEHEG-------QGIYVKVSMDGAPYLRKID 124

Query: 129 LGMVKGYGDLVGAMEKLFGSPIGCY---------EYTVTYEDRDGDWMLVGDVPWKMFIE 181
           L   KGY +L+ A+E +F   +G Y         ++  TYED+DGDWML+GDVPW+MFI 
Sbjct: 125 LSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFIC 184

[Close]
BLAST of Cucsa.300850 vs. TAIR10
Match: AT1G15580.1 (AT1G15580.1 indole-3-acetic acid inducible 5)

HSP 1 Score: 152.5 bits (384), Expect = 2.6e-37
Identity = 88/185 (47.57%), Postives = 109/185 (58.92%), Query Frame = 1 

Query: 6   AKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRKQVVGW 65
           +  L LEITELRLGLPGD   ++S    + KKR   EVE++ K      +  ++ QVVGW
Sbjct: 5   SNNLGLEITELRLGLPGDI--VVSGESISGKKRASPEVEIDLKC-----EPAKKSQVVGW 64

Query: 66  PPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKGYGDLV 125
           PPVCSYRR+NS +                 K  YVKVS +G  FLRK+DL M K Y DL 
Sbjct: 65  PPVCSYRRKNSLE---------------RTKSSYVKVSVDGAAFLRKIDLEMYKCYQDLA 124

Query: 126 GAMEKLFGSPIGCY----------EYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKK 181
            A++ LFG    CY          E    YED+DGDWML GDVPW+MF+ SCKRLRIMK+
Sbjct: 125 SALQILFG----CYINFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKR 163

[Close]
BLAST of Cucsa.300850 vs. TAIR10
Match: AT1G52830.1 (AT1G52830.1 indole-3-acetic acid 6)

HSP 1 Score: 151.0 bits (380), Expect = 7.4e-37
Identity = 94/196 (47.96%), Postives = 118/196 (60.20%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLIST-SKNNEKKRVFSEV--------EVEDKSRSKGE 63
           +A +GL LEITELRLGLPGD  S IS    + +KKRV S++        E E+   S  E
Sbjct: 1   MAKEGLALEITELRLGLPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVE 60

Query: 64  DEGR---RKQVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLR 123
           DE     + Q VGWPPVCSYRR+ +         +EE      K   YVKVS +G P++R
Sbjct: 61  DESLPVVKSQAVGWPPVCSYRRKKN---------NEE----ASKAIGYVKVSMDGVPYMR 120

Query: 124 KVDLGMVKGYGDLVGAMEKLFGS-PIGCY------EYTVTYEDRDGDWMLVGDVPWKMFI 181
           K+DLG    Y +LV  +E LFG   IG        EY + YED+D DWMLVGDVPW+MF 
Sbjct: 121 KIDLGSSNSYINLVTVLENLFGCLGIGVAKEGKKCEYIIIYEDKDRDWMLVGDVPWQMFK 180

[Close]
BLAST of Cucsa.300850 vs. TAIR10
Match: AT5G43700.1 (AT5G43700.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-34
Identity = 88/183 (48.09%), Postives = 114/183 (62.30%), Query Frame = 1 

Query: 9   LDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEV-EVEDKSRSKGEDEGRRK-QVVGWP 68
           ++L+ TELRLGLPG     +S  K+N  KRV  E  E E +S  K E     K Q+VGWP
Sbjct: 11  VNLKATELRLGLPGTE-ETVSCGKSN--KRVLPEATEKEIESTGKTETASPPKAQIVGWP 70

Query: 69  PVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKGYGDLVG 128
           PV SYR+ N    + ++ ESE   N       YVKVS +G P+LRK+DL M K Y +L+ 
Sbjct: 71  PVRSYRKNNV---QTKKSESEGQGN-------YVKVSMDGAPYLRKIDLTMYKQYPELMK 130

Query: 129 AMEKLFGSPIGCY---------EYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTE 181
           ++E +F   +G Y         ++  TYED+DGDWMLVGDVPW+MF+ SCKRLRIMK +E
Sbjct: 131 SLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSE 180

[Close]
BLAST of Cucsa.300850 vs. NCBI nr
Match: gi|568384715|ref|NP_001275532.1| (auxin-induced protein AUX22-like [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 1.0e-104
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1 

Query: 1   MTQVAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRK 60
           MTQVAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRK
Sbjct: 1   MTQVAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRK 60

Query: 61  QVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKG 120
           QVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKG
Sbjct: 61  QVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKG 120

Query: 121 YGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKG 180
           YGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKG
Sbjct: 121 YGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKG 180

Query: 181 SEMNSLSQ 189
           SEMNSLSQ
Sbjct: 181 SEMNSLSQ 188

[Close]
BLAST of Cucsa.300850 vs. NCBI nr
Match: gi|659093332|ref|XP_008447487.1| (PREDICTED: auxin-induced protein AUX22-like [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 8.4e-99
Identity = 181/188 (96.28%), Postives = 185/188 (98.40%), Query Frame = 1 

Query: 1   MTQVAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRK 60
           MTQ+AAKGLDLEITELRLGLPGDC SLISTSKNNEKKRVFSEVEVEDKSR+KGEDEGRRK
Sbjct: 1   MTQMAAKGLDLEITELRLGLPGDCGSLISTSKNNEKKRVFSEVEVEDKSRAKGEDEGRRK 60

Query: 61  QVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKG 120
           QVVGWPPVCSYR+R+SFKGKGE CESE IMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKG
Sbjct: 61  QVVGWPPVCSYRQRSSFKGKGE-CESEGIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKG 120

Query: 121 YGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKG 180
           YGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKG
Sbjct: 121 YGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKG 180

Query: 181 SEMNSLSQ 189
           SEMNSLSQ
Sbjct: 181 SEMNSLSQ 187

[Close]
BLAST of Cucsa.300850 vs. NCBI nr
Match: gi|778681486|ref|XP_004149851.2| (PREDICTED: auxin-induced protein 22A-like [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 8.0e-49
Identity = 106/187 (56.68%), Postives = 132/187 (70.59%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEG--RRKQ 63
           +A+ G++LEITELRLGLPG      S+SKN EKKRVF E      + + G D+   +R Q
Sbjct: 1   MASNGVELEITELRLGLPGSGGCRTSSSKN-EKKRVFCE---SSSTNNDGGDQPFPKRNQ 60

Query: 64  VVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKGY 123
           VVGWPPVCS+RRR+S  G  +     E        ++YVK+S +G P+LRKVDLG  KGY
Sbjct: 61  VVGWPPVCSHRRRSSGSGNNKDLSETET------PKIYVKISMDGAPYLRKVDLGSHKGY 120

Query: 124 GDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEGKGS 183
            DLV AME LFGS +GC ++ + YEDRDGDWMLVGDVPW MF+ESCKRLRIMK+TE KG 
Sbjct: 121 SDLVVAMENLFGSALGCSDFVLIYEDRDGDWMLVGDVPWNMFVESCKRLRIMKRTEVKGF 177

Query: 184 EMNSLSQ 189
           E++  S+
Sbjct: 181 EIHVPSE 177

[Close]
BLAST of Cucsa.300850 vs. NCBI nr
Match: gi|659093334|ref|XP_008447488.1| (PREDICTED: auxin-induced protein 22A-like [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 1.0e-48
Identity = 108/190 (56.84%), Postives = 130/190 (68.42%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEG-----R 63
           +A+ G++LEITELRLGLPG      S+SKN EKKRVFSE      S S   D G     +
Sbjct: 1   MASNGVELEITELRLGLPGSGSCHTSSSKN-EKKRVFSE------SSSTNNDGGDRRFPK 60

Query: 64  RKQVVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMV 123
           R QVVGWPPVCS+RRRNS     +     E        +MYVK+  +G P+LRKVDLG  
Sbjct: 61  RNQVVGWPPVCSHRRRNSGSSNNKGLSETEA------PKMYVKIGMDGAPYLRKVDLGSH 120

Query: 124 KGYGDLVGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTEG 183
           KGY DLV AME LFGS +GC ++ + YEDRDGDWML+GDVPW MFIESCKRLRIMK++E 
Sbjct: 121 KGYSDLVVAMENLFGSALGCSDFVLIYEDRDGDWMLLGDVPWNMFIESCKRLRIMKRSEA 177

Query: 184 KGSEMNSLSQ 189
           KG E++  S+
Sbjct: 181 KGFEIHVPSE 177

[Close]
BLAST of Cucsa.300850 vs. NCBI nr
Match: gi|823230471|ref|XP_012447963.1| (PREDICTED: auxin-induced protein AUX22 [Gossypium raimondii])

HSP 1 Score: 186.4 bits (472), Expect = 4.5e-44
Identity = 103/183 (56.28%), Postives = 123/183 (67.21%), Query Frame = 1 

Query: 4   VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEV-EVEDKSRSKGEDEGRRK-Q 63
           +A +GL LEITELRLGLPG        ++ NEKKRVFSE+ E E+  +S G  E + K Q
Sbjct: 1   MAKEGLGLEITELRLGLPG------GGTEKNEKKRVFSEISEEEENEKSNGPPELQSKSQ 60

Query: 64  VVGWPPVCSYRRRNSFKGKGEQCESEEIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKGY 123
           VVGWPPVCSYR++NSF  K     S+           YVKVS +G PFLRK+DL + KGY
Sbjct: 61  VVGWPPVCSYRKKNSFGDKDGSKTSK----------FYVKVSMDGAPFLRKIDLALHKGY 120

Query: 124 GDLVGAMEKLFGSPI----GCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKTE 181
            DL  A+EKLFG  +     C E+   YED+DGDWML GDVPW+MFIESCKRLRIMKK +
Sbjct: 121 SDLAKALEKLFGEALRDAESC-EFVPIYEDKDGDWMLAGDVPWEMFIESCKRLRIMKKAD 166

The following BLAST results are available for this feature:
BLAST of Cucsa.300850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AUX22_SOYBN1.4e-4553.33Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1[more]
AX22A_VIGRR2.2e-4352.55Auxin-induced protein 22A OS=Vigna radiata var. radiata GN=AUX22A PE=2 SV=1[more]
AX22C_VIGRR2.1e-4148.94Auxin-induced protein 22C OS=Vigna radiata var. radiata GN=AUX22C PE=2 SV=1[more]
IAA6_PEA7.5e-3949.48Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1[more]
IAA19_ARATH9.1e-3744.72Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19 PE=1 SV=2[more]
BLAST of Cucsa.300850 vs. TrEMBL
Match NameE-valueIdentityDescription
Q9SSY3_CUCSA7.1e-105100.00Auxin-responsive protein OS=Cucumis sativus GN=CsIAA1 PE=2 SV=1[more]
A0A0A0L852_CUCSA5.6e-4956.68Auxin-responsive protein OS=Cucumis sativus GN=Csa_3G516540 PE=3 SV=1[more]
A0A0D2TJ06_GOSRA3.2e-4456.28Auxin-responsive protein OS=Gossypium raimondii GN=B456_009G132300 PE=3 SV=1[more]
A0A0R0IQ29_SOYBN1.6e-4353.33Auxin-induced protein OS=Glycine max GN=GLYMA_08G207900 PE=3 SV=1[more]
A0A0B2STH5_GLYSO1.6e-4353.33Auxin-induced protein OS=Glycine soja GN=glysoja_029217 PE=3 SV=1[more]
BLAST of Cucsa.300850 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15540.15.1e-3844.72 indole-3-acetic acid inducible 19[more]
AT1G04240.11.5e-3745.13 AUX/IAA transcriptional regulator family protein[more]
AT1G15580.12.6e-3747.57 indole-3-acetic acid inducible 5[more]
AT1G52830.17.4e-3747.96 indole-3-acetic acid 6[more]
AT5G43700.12.0e-3448.09 AUX/IAA transcriptional regulator family protein[more]
BLAST of Cucsa.300850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|568384715|ref|NP_001275532.1|1.0e-104100.00auxin-induced protein AUX22-like [Cucumis sativus][more]
gi|659093332|ref|XP_008447487.1|8.4e-9996.28PREDICTED: auxin-induced protein AUX22-like [Cucumis melo][more]
gi|778681486|ref|XP_004149851.2|8.0e-4956.68PREDICTED: auxin-induced protein 22A-like [Cucumis sativus][more]
gi|659093334|ref|XP_008447488.1|1.0e-4856.84PREDICTED: auxin-induced protein 22A-like [Cucumis melo][more]
gi|823230471|ref|XP_012447963.1|4.5e-4456.28PREDICTED: auxin-induced protein AUX22 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR003311AUX_IAA
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.300850.1Cucsa.300850.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 97..175
score: 23
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 1..180
score: 6.4
NoneNo IPR availableGENE3DG3DSA:3.10.20.240coord: 94..168
score: 1.
NoneNo IPR availablePANTHERPTHR31734:SF12AUXIN-RESPONSIVE PROTEIN IAA19-RELATEDcoord: 1..180
score: 6.4
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 87..174
score: 5.89

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.300850Csa3G516530Cucumber (Chinese Long) v2cgycuB427
Cucsa.300850CSPI03G24500Wild cucumber (PI 183967)cgycpiB451
Cucsa.300850CsaV3_3G026270Cucumber (Chinese Long) v3cgycucB464
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None