Cucsa.291910 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.291910
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCTP-dependent diacylglycerol kinase 1
Locationscaffold02766 : 508935 .. 510831 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAACCTTCCCAGTTCATTAGTCTTTCAATCGTTCAATTTCCTTTTTTTATCTCTTATCCCCATTTCTTGCTGTTTCCACTCTATTCAAGAACAAGATCGATACTGCAACGGAGTTTATTGATTTGTCCTCTACAGGTACGTTCAAATTTGAGATGAATAATTACGCTATCTGTTACTGAAGTTGCACGGTCCTTCTCGAAATGCTGATTTATGTGTTAATTCTTCAATGGATTTTAAAATCATTTAGTAGTCTCTAATTTTGAATCCTAAATATAGGCTTGAAAGCATTCTGGAGTAGTAAATTGTAGCATATTTCAGAGAATCGAAGTCCGGAGAAGTTTGGAGTCTGTAAACACATGGTTCAGGTATTTTTTTTTTTTCGTTTACCAGTTGTTTGGGAGCTCTTTGAAAGATAATGAAATTTTCTTAATTGTATTGTAGTTTGTTTGGGTAGATATGGCTTACTTTCTAGAATCGAAGTTGTTCCTTCCTTCTACAGATCATATAGGACCATGAGCACTGGTTTCAAATGTTCAATAAAATCTTACATTCCTAAATAGAACTAGACTTGGAAACTAAATCTTGTAAGGTGCTTCGGAGTTGCAACAATTTGTTGCGTGAGAATACAAACCTCCGAACCTTCTGGTTGACGTTATATTGTCTTGAACAGTTAAGTTCAAGTTGATACAATTTAGAAGTTCCTTTTGATAATAGTTTTCAAATAGCAAACGCTTAGCCTTCCGTTGGCTGCTTTGTGATAAGATGCCGGTGTGCTAACCTTGGCCTAAGACTTACTTTATGAACTCTTCCAGATTTATCCACCTCTCGGTCTATAAATCCATTCCATTGTTGTCCAATATGATTCTCGTGCAGACTTATTACAATTTTAAGATACCTTTGTATTGAGTCAGATGAAATTTCCCTTTGAGTTCTGAGAGGCATGATTTGATGATGGGATGACATTCTCTTTGAATCGTACAACATATGACTGCATAGTTAGTCATTGAGGTTTACCTTTGAGTAACTCTATGATACTTGTTACTTAATTGATCAATTAGAGCTCTTTTGTATATGATTTGACTATTTGGTTTGGACGTTATCAGAGGGTTTTACTTTATAAATCACTCCCTTAGATTGCTTGTATGGATGTTCCCGTCTACTTTATAAATCATATTTCAGTCAAGGTTACATTTTCACACTAGCTCTCTTGTAGTTATTTGTAACTAAACAAGTAATGAAGTCCCCTCGGAATTTTAAAGTATTCGTGTCGTGCTTTGATTTTTATCTCATTTTTAGTTGTGTGTTGCGTTAACCTTTGCCAGACTCAATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCACTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGACTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCGGACGAACTAGTTGAAGAAGCTTCTGAGGACGATGATGAAATCACTGAAAAACCTCAAGTGAAGGCAAAGAAGACAAAAGTAACATAATTTCTCTCTCTGTTCATGGGCCAAACCCTGAAATTCTAAAGAACAAAAATAGTGTCTTGGAAGAGAATATAGAACGTAACTTTAAGTTCATTAGTGTTCTCTAAATGTGCTTGGTCTGTGTCATTTGTTCGTTTCAATACCTTGGACCCCTTTTCTGATTCTAAGTTCTAACTAGTTTCCCTCTCCTTCATTTTCATTTTTCATGATTAGGGAAAATTAATAGCATTGAAAGATTCAAACCAATGTGGAATTAGATGTATTTAGTTTAAATTATTAATCGAGATC

mRNA sequence

AGAAAACCTTCCCAGTTCATTAGTCTTTCAATCGTTCAATTTCCTTTTTTTATCTCTTATCCCCATTTCTTGCTGTTTCCACTCTATTCAAGAACAAGATCGATACTGCAACGGAGTTTATTGATTTGTCCTCTACAGACTCAATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCACTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGACTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCGGACGAACTAGTTGAAGAAGCTTCTGAGGACGATGATGAAATCACTGAAAAACCTCAAGTGAAGGCAAAGAAGACAAAAGTAACATAATTTCTCTCTCTGTTCATGGGCCAAACCCTGAAATTCTAAAGAACAAAAATAGTGTCTTGGAAGAGAATATAGAACGTAACTTTAAGTTCATTAGTGTTCTCTAAATGTGCTTGGTCTGTGTCATTTGTTCGTTTCAATACCTTGGACCCCTTTTCTGATTCTAAGTTCTAACTAGTTTCCCTCTCCTTCATTTTCATTTTTCATGATTAGGGAAAATTAATAGCATTGAAAGATTCAAACCAATGTGGAATTAGATGTATTTAGTTTAAATTATTAATCGAGATC

Coding sequence (CDS)

ATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCACTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGACTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCGGACGAACTAGTTGAAGAAGCTTCTGAGGACGATGATGAAATCACTGAAAAACCTCAAGTGAAGGCAAAGAAGACAAAAGTAACATAA

Protein sequence

MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNVPNDVPDELVEEASEDDDEITEKPQVKAKKTKVT*
Homology
[Close]
BLAST of Cucsa.291910 vs. TrEMBL
Match: A0A0A0M0V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G679550 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60

Query: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 94
          PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]
BLAST of Cucsa.291910 vs. TrEMBL
Match: W9QJW0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009756 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-24
Identity = 61/93 (65.59%), Postives = 78/93 (83.87%), Query Frame = 1 

Query: 1   MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
           M+A  +E +P +P+V+V+  LG+ET+  N ANKGTLSEQL S+KE+SMAILK+YITK+NV
Sbjct: 62  MEAQVQEAVPPQPQVQVTFSLGTETYSAN-ANKGTLSEQLASVKEESMAILKDYITKYNV 121

Query: 61  PNDVPDELVEEASE-DDDEITEKPQVKAKKTKV 93
           PNDVPDE +EE+S  DDDEI EKPQ K+KKTK+
Sbjct: 122 PNDVPDEPLEESSSGDDDEIIEKPQAKSKKTKI 153

[Close]
BLAST of Cucsa.291910 vs. TrEMBL
Match: V4U6D9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023058mg PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-23
Identity = 55/93 (59.14%), Postives = 72/93 (77.42%), Query Frame = 1 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          M+    + IP + RV  +L LGSE H +N  NK ++SEQL SMKE SM++LK++ITKHNV
Sbjct: 1  MEVQCGDVIPPKSRVVCTLRLGSEVHSINAINKDSISEQLVSMKEQSMSVLKDFITKHNV 60

Query: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 94
          PNDVPD+LVE ASE+D ++ EKP VK+KKTK+T
Sbjct: 61 PNDVPDDLVESASEEDTDVPEKPHVKSKKTKIT 93

[Close]
BLAST of Cucsa.291910 vs. TrEMBL
Match: A0A067H4R7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034484mg PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-23
Identity = 55/93 (59.14%), Postives = 72/93 (77.42%), Query Frame = 1 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          M+    + IP + RV  +L LGSE H +N  NK ++SEQL SMKE SM++LK++ITKHNV
Sbjct: 1  MEVQCGDVIPPKSRVVCTLRLGSEVHSINAINKDSISEQLVSMKEQSMSVLKDFITKHNV 60

Query: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 94
          PNDVPD+LVE ASE+D ++ EKP VK+KKTK+T
Sbjct: 61 PNDVPDDLVESASEEDTDVPEKPHVKSKKTKIT 93

[Close]
BLAST of Cucsa.291910 vs. TrEMBL
Match: M5VL14_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013991mg PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.4e-23
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 1 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          M+A  +E +P RP+VKV   LGSET+ VN  N G LSEQ+ S+KE+SM ILK++IT+HNV
Sbjct: 1  MEAQIQESVPCRPQVKVKFQLGSETYSVNR-NTGILSEQVVSVKEESMNILKDFITRHNV 60

Query: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 94
          PNDV DELVE +SEDD EI E P VK KKTK T
Sbjct: 61 PNDVTDELVENSSEDDGEIPENPPVKLKKTKFT 92

[Close]
BLAST of Cucsa.291910 vs. TAIR10
Match: AT1G47820.1 (AT1G47820.1 unknown protein)

HSP 1 Score: 73.6 bits (179), Expect = 7.5e-14
Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 1 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          M+  +   +P +  VKV   LG+E++ +++    T+ +QL SMKE+SM ILK++ITKHNV
Sbjct: 1  MEIESHVSVPGKNLVKVEFKLGTESYTIDSIKGDTVLDQLVSMKEESMKILKDFITKHNV 60

Query: 61 P-NDVPDELVEEASEDDDEITEK---PQVKAKKTKV 93
          P +DVPD+++ +  E DD+       P    KKTK+
Sbjct: 61 PDDDVPDQILSDDEEGDDDDASPVICPVKPPKKTKI 96

[Close]
BLAST of Cucsa.291910 vs. NCBI nr
Match: gi|778664292|ref|XP_011660263.1| (PREDICTED: uncharacterized protein LOC105436354 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 2.9e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60

Query: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 94
          PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]
BLAST of Cucsa.291910 vs. NCBI nr
Match: gi|659086138|ref|XP_008443784.1| (PREDICTED: uncharacterized protein LOC103487289 isoform X1 [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-42
Identity = 90/93 (96.77%), Postives = 90/93 (96.77%), Query Frame = 1 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 7  MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 66

Query: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 94
          PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT
Sbjct: 67 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 99

[Close]
BLAST of Cucsa.291910 vs. NCBI nr
Match: gi|659086140|ref|XP_008443785.1| (PREDICTED: uncharacterized protein LOC103487289 isoform X2 [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-42
Identity = 90/93 (96.77%), Postives = 90/93 (96.77%), Query Frame = 1 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 60

Query: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 94
          PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]
BLAST of Cucsa.291910 vs. NCBI nr
Match: gi|703064620|ref|XP_010087247.1| (hypothetical protein L484_009756 [Morus notabilis])

HSP 1 Score: 120.2 bits (300), Expect = 2.0e-24
Identity = 61/93 (65.59%), Postives = 78/93 (83.87%), Query Frame = 1 

Query: 1   MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
           M+A  +E +P +P+V+V+  LG+ET+  N ANKGTLSEQL S+KE+SMAILK+YITK+NV
Sbjct: 62  MEAQVQEAVPPQPQVQVTFSLGTETYSAN-ANKGTLSEQLASVKEESMAILKDYITKYNV 121

Query: 61  PNDVPDELVEEASE-DDDEITEKPQVKAKKTKV 93
           PNDVPDE +EE+S  DDDEI EKPQ K+KKTK+
Sbjct: 122 PNDVPDEPLEESSSGDDDEIIEKPQAKSKKTKI 153

[Close]
BLAST of Cucsa.291910 vs. NCBI nr
Match: gi|694407989|ref|XP_009378708.1| (PREDICTED: uncharacterized protein LOC103967169 isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 118.2 bits (295), Expect = 7.5e-24
Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 1 

Query: 1   MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
           MDA  +E +P RP +KV   LGSET+ V   +KG LSEQL S+KE+SM ILK++IT+HNV
Sbjct: 26  MDAQIQEAVPCRPCIKVEFQLGSETYSVKE-HKGILSEQLVSVKEESMRILKDFITRHNV 85

Query: 61  PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 94
           PNDVPDEL+E +SEDD EI EKP VK+KKTK T
Sbjct: 86  PNDVPDELLENSSEDDGEILEKPPVKSKKTKFT 117

The following BLAST results are available for this feature:
BLAST of Cucsa.291910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0V3_CUCSA2.0e-44100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G679550 PE=4 SV=1[more]
W9QJW0_9ROSA1.4e-2465.59Uncharacterized protein OS=Morus notabilis GN=L484_009756 PE=4 SV=1[more]
V4U6D9_9ROSI1.2e-2359.14Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023058mg PE=4 SV=1[more]
A0A067H4R7_CITSI1.2e-2359.14Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034484mg PE=4 SV=1[more]
M5VL14_PRUPE4.4e-2363.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013991mg PE=4 SV=1[more]
BLAST of Cucsa.291910 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G47820.17.5e-1440.63 unknown protein[more]
BLAST of Cucsa.291910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664292|ref|XP_011660263.1|2.9e-44100.00PREDICTED: uncharacterized protein LOC105436354 [Cucumis sativus][more]
gi|659086138|ref|XP_008443784.1|2.1e-4296.77PREDICTED: uncharacterized protein LOC103487289 isoform X1 [Cucumis melo][more]
gi|659086140|ref|XP_008443785.1|2.1e-4296.77PREDICTED: uncharacterized protein LOC103487289 isoform X2 [Cucumis melo][more]
gi|703064620|ref|XP_010087247.1|2.0e-2465.59hypothetical protein L484_009756 [Morus notabilis][more]
gi|694407989|ref|XP_009378708.1|7.5e-2464.52PREDICTED: uncharacterized protein LOC103967169 isoform X1 [Pyrus x bretschneide... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.291910.1Cucsa.291910.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37194FAMILY NOT NAMEDcoord: 2..93
score: 1.2
NoneNo IPR availablePANTHERPTHR37194:SF1T2E6.9coord: 2..93
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.291910Csa1G679550Cucumber (Chinese Long) v2cgycuB418
Cucsa.291910MELO3C010153Melon (DHL92) v3.5.1cgymeB485
Cucsa.291910CSPI01G33270Wild cucumber (PI 183967)cgycpiB441
Cucsa.291910CsaV3_1G045260Cucumber (Chinese Long) v3cgycucB451
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None