Cucsa.281980 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGCCCGGAAATTTCATTGTATCAATGGCAGCCACGGTGGTGACGATGAGGATGAGGATGATACCGACGGTACGCGCCATGGCTTCATCTTCGCCTGAATCACTCTTCGTCAAGAAAACCATCGCCTCCCACCAGACCGTCATCTTCTCCAAATCCTATTGCCCGTATCTTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCGTCAATTGTTTTAATATTGTTGTGTGTGTCCAAGATTGGAAGCAAATTCAGGGTTCATTAATGAATCAAGGATTATTTTCTGTTTCTTTTAAAGTTCAATTGGAATCGTTGAAATTCCTGGTGTTAATTATTTCTAGTTCTAAAATGCAGGTATTGTGAAACGGCAAAAACTGTTTTCAAGGATTTGAACAAAGTTCCTCATGTTGTTGAGTTGGATCAAAGGGGTATTTACTTAATTTCCTTTCTTCTTGTTTTCTCTCTGATTATGAAAAGTAACAGTTACAAGTCTCTTTATTAACTGTTGAATTTGGGTTGCATCTGTTGAAACTGAGTATACATGAGAATCTTGTTCTAGCTTAGTAACTTCAAGTTATGAAAATGTTGGAGTGTACATTTGAGATTTTTGAAGCTCAAGTGTGTGTTAACTAAATGGATTGCCTTTACTATTTTGTTATCTCTTTGCTTCATCTGCTTCTCTTCTTCTTCCATTTCTGTTGTTTTCTGATTCAGTTTCATTATTCAAAGACACTATCTAGGTAAATGATTGAGACAAACTTAAGTGAAGCTTAGAAATAAGAACAGCAAAAACTGTAAGAGAGTAAGAGAAACTGCCTTAGTTTTAGTGCTGCTTTCAACCTCTCACAATGAGGATTACCTGCAGCTGCAATATTTATGTATCAAGTCCTGTGATGTGATCCTTTGTTATATGCTTTGCCAATTCGAAGCTAAACGTTTTGTTTAGGAACATTTTTTCTACTCTCTTTGGCTAATTTTCTCTTTTCAATGTGCAACTCTCAACATGCTCTTCAAAGATGGGGTCTTTTTGGTTTCACCATTCTTGGGTTTTCTTTGTTTGGATTGAATATTTGATTGAGATTCATGGTCTTGGTTTATGATACTATATTAAATTATATAGGATTTCATCTCAAAACCAATTGACAATAAGAGAAGTAATTGTTGTGTCTTATTAAGACCATATAGTCATTTCATCTTTCTAATATGAGATCCTCAAAAAGGAAAGGGGCCAAAAAGTCGCTGATGATAGAGGAAAAGTATGACCGATTAATGTGGCTTGGTTTTGATGCAAATATTGGCAAGAAAGAATCACCAAACTTGCACATGTGGACAAGTTTTTGATTCAGAAACGAGGTGAACTGCAAAATATAATGAACCGCCCCTGATGTCCAAGTTAGTTTAGAGGATTCAGAATGTAGTAAGAGTTAACTTACCCCTTCATTATATAACTGGGATGACCTAGAGTTTTTCCTCTCCTCCTCAGATTAAGATGATCTAGATCTGCCTCTTCTCGCCGGGTCAATCCTGTGGAGTGTGGATAAAAAATTCCACATATCCTTCGGCCAACAACCTTGGCCTGATTGGCCCTGGTTGACTCTCTTTAGCCTTTATAGGCCTTGGGTTTGGTTTTGTCCATTATGAGTCCAACTCGTGTTGACTTTGCTTTGAGCACAAATTCAACCGTAACTCTTGAATTATTTTGTTAGTGAGAAATTATCAAAATCTTATTTTATCTTTTGGTAGTTCGTACAGGTTCTTTGTCTTCTTTACTTTAGTTCTCTTCTCTTTCATTTCATTTCAGGATGGGGATAGAATTGAAGCATTGGTATCAATTCCCTAAATGGTCTGGCAAAACTGTTACCATTAGACTAGACACATATATATATCATAACTCTTGTTTCCATGTCTTTCTATATCCTACTGTTCTCTCCATGCTTTTCTATGACTCATAACTTAAAAGTTAGTTTAGTTAACTCCTAGAATTTGGATCTTTATCCCGTAGATGATGGGAGTGCCATTCAAGATGCTTTAAGTGCACTTGTCGGAAGGCACACTGTACCTCAAGTGTTTATAGATGGAAAACACATAGGTGGATCAGATGGTAATTGGCTCTTCCTTGGCAACTTATTGTTTGTAATATATTCTTCTCCAAAGTACTTTCTAACTCATTGAGACCTTGATTTTCAGATACCGTTGAAGCATATGAGAGCGGAGAATTGGGTAAACTCCTGGGTATTGAGGAATAGGATAAAGTGATTCATCTCTTCAATTCTAAGCAGATATCTTTGCACATACAGATTGTATTTTTGCTTGAATCAACTGCTTATTAATTATATGGGATAAATTGACCACTACATGATATTATTTTGTCTTCAAAATAGTTGTCCGTTGTTGGTCTGTTGGGTGCGGATTAACAAATCTACATCCTTTTAGGAATTATTGAATATAATTTTAAAGTATTTTTGCAGTTTCTTCGCATATAAACTATTATCTACGTTGTGACAACATCTACTTGTAATTTCTCACTGTAGTTAAAGCTCCAATCCAACTTTAGGGTCAAACCATCCTGTACTGTTGGGTCAAACTCACATTTATTAAGGAGCAGAAATGGGACTCTGTTTGGTTGATAGCAGCTTAATTCTTATTAACCTTCTTCTGCTAAGCTTTACTTTTCCTTTTCAACTTCTGAGTTTTATGGTTTATATGCTATGATTAAACTATTGATTTCATAGAGTCATCCATTGTTTTATATACATTTTGACAAAACACCCGATTATGACC CGGCCCGGAAATTTCATTGTATCAATGGCAGCCACGGTGGTGACGATGAGGATGAGGATGATACCGACGGTACGCGCCATGGCTTCATCTTCGCCTGAATCACTCTTCGTCAAGAAAACCATCGCCTCCCACCAGACCGTCATCTTCTCCAAATCCTATTGCCCGTATTGTGAAACGGCAAAAACTGTTTTCAAGGATTTGAACAAAGTTCCTCATGTTGTTGAGTTGGATCAAAGGGATGATGGGAGTGCCATTCAAGATGCTTTAAGTGCACTTGTCGGAAGGCACACTGTACCTCAAGTGTTTATAGATGGAAAACACATAGGTGGATCAGATGATACCGTTGAAGCATATGAGAGCGGAGAATTGGGTAAACTCCTGGGTATTGAGGAATAGGATAAAGTGATTCATCTCTTCAATTCTAAGCAGATATCTTTGCACATACAGATTGTATTTTTGCTTGAATCAACTGCTTATTAATTATATGGGATAAATTGACCACTACATGATATTATTTTGTCTTCAAAATAGTTGTCCGTTGTTGGTCTGTTGGGTGCGGATTAACAAATCTACATCCTTTTAGGAATTATTGAATATAATTTTAAAGTATTTTTGCAGTTTCTTCGCATATAAACTATTATCTACGTTGTGACAACATCTACTTGTAATTTCTCACTGTAGTTAAAGCTCCAATCCAACTTTAGGGTCAAACCATCCTGTACTGTTGGGTCAAACTCACATTTATTAAGGAGCAGAAATGGGACTCTGTTTGGTTGATAGCAGCTTAATTCTTATTAACCTTCTTCTGCTAAGCTTTACTTTTCCTTTTCAACTTCTGAGTTTTATGGTTTATATGCTATGATTAAACTATTGATTTCATAGAGTCATCCATTGTTTTATATACATTTTGACAAAACACCCGATTATGACC ATGGCAGCCACGGTGGTGACGATGAGGATGAGGATGATACCGACGGTACGCGCCATGGCTTCATCTTCGCCTGAATCACTCTTCGTCAAGAAAACCATCGCCTCCCACCAGACCGTCATCTTCTCCAAATCCTATTGCCCGTATTGTGAAACGGCAAAAACTGTTTTCAAGGATTTGAACAAAGTTCCTCATGTTGTTGAGTTGGATCAAAGGGATGATGGGAGTGCCATTCAAGATGCTTTAAGTGCACTTGTCGGAAGGCACACTGTACCTCAAGTGTTTATAGATGGAAAACACATAGGTGGATCAGATGATACCGTTGAAGCATATGAGAGCGGAGAATTGGGTAAACTCCTGGGTATTGAGGAATAG MAATVVTMRMRMIPTVRAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKTVFKDLNKVPHVVELDQRDDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGIEE*
BLAST of Cucsa.281980 vs. Swiss-Prot
Match: GRXC4_ARATH (Glutaredoxin-C4 OS=Arabidopsis thaliana GN=GRXC4 PE=2 SV=2) HSP 1 Score: 158.7 bits (400), Expect = 4.2e-38 Identity = 74/102 (72.55%), Postives = 93/102 (91.18%), Query Frame = 1
BLAST of Cucsa.281980 vs. Swiss-Prot
Match: GRXC8_ORYSJ (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica GN=GRXC8 PE=2 SV=2) HSP 1 Score: 144.8 bits (364), Expect = 6.2e-34 Identity = 71/107 (66.36%), Postives = 85/107 (79.44%), Query Frame = 1
BLAST of Cucsa.281980 vs. Swiss-Prot
Match: GRXS6_ORYSJ (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica GN=GRXS6 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 5.6e-27 Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 1
BLAST of Cucsa.281980 vs. Swiss-Prot
Match: GRXC3_ARATH (Glutaredoxin-C3 OS=Arabidopsis thaliana GN=GRXC3 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.4e-25 Identity = 58/94 (61.70%), Postives = 68/94 (72.34%), Query Frame = 1
BLAST of Cucsa.281980 vs. Swiss-Prot
Match: GRS10_ORYSJ (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica GN=GRXS10 PE=2 SV=2) HSP 1 Score: 94.4 bits (233), Expect = 9.6e-19 Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 1
BLAST of Cucsa.281980 vs. TrEMBL
Match: A0A0A0LUU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G427530 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 6.4e-62 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of Cucsa.281980 vs. TrEMBL
Match: A0A0A0LXH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G427520 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.4e-40 Identity = 96/135 (71.11%), Postives = 104/135 (77.04%), Query Frame = 1
BLAST of Cucsa.281980 vs. TrEMBL
Match: A9PBC3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s13330g PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 5.3e-40 Identity = 85/119 (71.43%), Postives = 98/119 (82.35%), Query Frame = 1
BLAST of Cucsa.281980 vs. TrEMBL
Match: Q8S3L1_9ROSI (Glutaredoxin OS=Populus tremula x Populus tremuloides PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 5.3e-40 Identity = 85/119 (71.43%), Postives = 98/119 (82.35%), Query Frame = 1
BLAST of Cucsa.281980 vs. TrEMBL
Match: A0A067LHK5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24047 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 3.4e-39 Identity = 82/102 (80.39%), Postives = 90/102 (88.24%), Query Frame = 1
BLAST of Cucsa.281980 vs. TAIR10
Match: AT5G20500.1 (AT5G20500.1 Glutaredoxin family protein) HSP 1 Score: 158.7 bits (400), Expect = 2.3e-39 Identity = 74/102 (72.55%), Postives = 93/102 (91.18%), Query Frame = 1
BLAST of Cucsa.281980 vs. TAIR10
Match: AT1G77370.1 (AT1G77370.1 Glutaredoxin family protein) HSP 1 Score: 116.3 bits (290), Expect = 1.3e-26 Identity = 58/94 (61.70%), Postives = 68/94 (72.34%), Query Frame = 1
BLAST of Cucsa.281980 vs. TAIR10
Match: AT4G28730.1 (AT4G28730.1 Glutaredoxin family protein) HSP 1 Score: 90.5 bits (223), Expect = 7.8e-19 Identity = 53/118 (44.92%), Postives = 69/118 (58.47%), Query Frame = 1
BLAST of Cucsa.281980 vs. TAIR10
Match: AT5G63030.1 (AT5G63030.1 Thioredoxin superfamily protein) HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16 Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 1
BLAST of Cucsa.281980 vs. TAIR10
Match: AT2G20270.2 (AT2G20270.2 Thioredoxin superfamily protein) HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 1
BLAST of Cucsa.281980 vs. NCBI nr
Match: gi|449457217|ref|XP_004146345.1| (PREDICTED: glutaredoxin-C4-like [Cucumis sativus]) HSP 1 Score: 244.6 bits (623), Expect = 9.2e-62 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of Cucsa.281980 vs. NCBI nr
Match: gi|659107142|ref|XP_008453541.1| (PREDICTED: glutaredoxin-C4-like [Cucumis melo]) HSP 1 Score: 238.8 bits (608), Expect = 5.0e-60 Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 1
BLAST of Cucsa.281980 vs. NCBI nr
Match: gi|659107140|ref|XP_008453540.1| (PREDICTED: glutaredoxin-C4-like [Cucumis melo]) HSP 1 Score: 176.8 bits (447), Expect = 2.4e-41 Identity = 98/135 (72.59%), Postives = 103/135 (76.30%), Query Frame = 1
BLAST of Cucsa.281980 vs. NCBI nr
Match: gi|449457215|ref|XP_004146344.1| (PREDICTED: glutaredoxin-C4-like [Cucumis sativus]) HSP 1 Score: 173.7 bits (439), Expect = 2.0e-40 Identity = 96/135 (71.11%), Postives = 104/135 (77.04%), Query Frame = 1
BLAST of Cucsa.281980 vs. NCBI nr
Match: gi|224144252|ref|XP_002325236.1| (hypothetical protein POPTR_0018s13330g [Populus trichocarpa]) HSP 1 Score: 171.8 bits (434), Expect = 7.6e-40 Identity = 85/119 (71.43%), Postives = 98/119 (82.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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