Cucsa.281030 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.281030
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	G-patch domain containing protein, expressed
Location	scaffold02633 : 957377 .. 960792 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAACTTACTACCTCAATGGAAAGTCGCCATTTTTGCAAGGTGTCATCCGTTCTTCAGAATCAAGAAaCAAAAAAAAGTTAAAAaCTCCACACGCTAGGGCTTAGGCGAAAGTGCGAAAGTTCTACAAATTTCGAATTGGGTTCGGTCTTTGTAAACAAAATAGTCGTCTAAGAATTATCTTAAGATTACCCACAAGTCCTTTTTCAGGTACATTTCTTCTATCAGCTTGGCGCCATCAGTTTTTATATCTAAATGAATTTGTTGAAGAGGAATAAGAGTTAATTCGTATGTGGTAGGTTGTTTAAACTAGTTAATCTATTCCTAATTTTGTATTCGAGATGTCATACTCCAGTTGAAGGGTTTGTTTGTTTGTTTTTGCAGTTTGGTTTTATCTTGTAGTTTATAAATTTGTGCTGCATTTGATTTTGGAGTATCCTTATCCTAGTTATTTGAAGGGTATAGAAGTGGTTAAGTTTGGCAATGTATGAATAGACTCGTATGGAGCTATTCAATTACCAGGTAGATATAACAAATTTGTGATTAGGAATATTTGTATTTCTCCGATCGAAACAGTGCATTATGTCGAGGAAGATATTCTAATCAGACGCATAATCAAATGTTGAAAGATCATGCGGTGTCAACTTCTCTTATTTTATAGGTCCTGTTCATTTTAGAGTATAGCATTACATGTGGGTGTGGGGAGTGGTTTTGTTTAAGAGGGAGGAAATTGCTTAATCTGCTCTATGTAGAAGGTTAAAATTGCAGTACTTACTTATGCTCGTGGTAGAATTGGATGAAATTGAAAGTTTAGGGTGTTAATATAACTTGAGAAGTTTAGTTATAAATTTGTTTTTTTtGCCCCCCCcAAAAAAaCGAATAAAACTAACTCATTCCCAGTAACGTTGTATACATTTATGTCTCCTTGTTGTACTCTGGGAAGCTGATGTCTTGGTTCATGGTGCCCCAGGAGGAAGAATGGATTTGGAGTCGGGCCCAGGGGGTTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCGGGTTCTCTCTCTTTCACCCACTGTCATTTGTATCCTCCTGTTTTCTATGTTTATTCTATCTATCTATGTTATACCTTGAAGTCTTTGAGTTTTATTTTATATACTGATTTTTCTTCTTTTTTGGTTGTTGTCTTCTTAAAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGGACGGGCCTTGGAGTTTCTGAGCAGGTTATTTACTTATACTTTTCATGCTGTATCAGTTACTCTAAATAAGATTAGTTATTTCTCAATAATTTAAAAATGAGTAGTTGGTTAATGAAACAGGAAATTTCGGTCATTTGATATCCTGTAACGACATAGTCTATACAAACAAAAATTTACAGTGGAACCGTGATCATTATCAGAGTTAGTAATGAGGATTGAGGATTCTATACAGGGATAGAAGGGAAGGAAGAAGAGAGTGGATTAAAGCTATTGTTAAGTCTTAAGAGGCCTGTTAAAGACAGGGCAGTCTTTTGTTGGGTAGTTGTAGATTCCAATTGGGGCCCCTTACTGTATCCATCTGCTTGGAATGGAATAATTACCTGCTCGGGATGGTCAAGGTGGGAAATCCCTGATTTAACTGGGATATGGTGGACCGTGGAAAATTTTACATGGGGAAGACCAGTCTGTTTGTGAAATTCTCAAAGCTGGCAGTTCCTTTATAGGAAAAAGTGCGCATAAATCTATATGTTAATATTTTGTAATATCTGCAATCTATACTATACATGCATATGTACATGGTCATAAAATAATTAAACTCAAAAAGCTGCCGGTTAACTTTCATGGCAGAAAAATTTGATCCCTATGTGGGAATTCCATGAACCTCCTCCATTCTCAAAATGGAATTTAGGGTGGGGATGAAATATAAATTTTTCTGGAGAGTTTGTAGGGGAGAGCATTTTCCACTAGCTTGGGTGTAGTGTTTAGATTCCTACTAACTCTTAGTTGGCTTGTCTTATGCTAGAGCAGGGAAGAAGCAGTAGGTTATCGCTGGCTTTGTTTCCTTTCCACCTTAGAACTTTCAAAGAATTCATTTAGCATTTTTTCTTTGGTTTTGAGGGAGGTCTTTTTGGTAACCCTTCCTTGGGGAAGAGCTAAATGCAATTAGGGTAATCTCATGGGAATCATTATCACTTGAAAGAATGTATGAACATTCTTAGAGAGTTGCATTAAGTGGATGTGATAAAGGAGAATGGTGTCTTTGTCTCATCCTCTACTGTTTTCTGTTTTTGCCTCTCTAAAGCCAAGTTGAGAGATGTTTTGCCACTTCTTAGATTTATTATTTGTTGTCCCTCATTTTTTATCATCCTAACCACGGATTTTTTGTTTTATTGTTGTTTTTATAAAAGGGAAAGTGCATGGTGGTTCGTTTTTtCCTCTTATGGTGCATGTAACTAGGTCATTGCAGTGCAGTGCTCTCTTGTTTGCTGTTATCCTTCGATGTTTACACTTGGAAACTTACTATAATTGAACTCTCATACAAGCAGGGTAGACTGGAACCCGTACAGGCGTCTGTGAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGTGAAGAAGAAAATTAAAGAAACTACAGATAATGCAACCTCAGATAGAAAAAaTAACCAGGTAAAACTTTTGTACATGAAGTTCTCTGCATCCTTAATCGCTATCATCATTCTGGAAACTACAGGAGCTTAGAAAAATTCTTTTGAATTAGAATAAATTTCAAAATGAGCATAATTACGAAAAGAAAGTTATGTAGGAAACACTAAGAAGAAGAAGAGTAAGTGCACTTAGCCATCTCAACAATTCTATATTTTGACATGATTGCCTTCAAAATTTTCATATATGACTTTTTTCGGTTATGTGTTAACTAATTGGATTATGTTCAAGTTCGAAAAAACACATTTATTTTGAATAAAACGGGTTTGAACTCAAGTGGATAGAGTTGTTGCACATTTAGAAGTTCACTCCACGACAATTATGTTTTATTTTTATTTATTTTTTAGTTCAACAATAGTGATGGTAGGTAGATTCAAACTTTTAACTCTTTTAGTCAATGGCATGTGCTTCACTTGTTTAGTTAGGCTCAGGTTAACTCGAAAAAATAAGCGGAGTTAATAATAAGTATGTTGTTGATCTCCAGGAACGTCCTCCTCCAAAGAAAGCGAAGGGGCTAACGAAAAGGATGAGGAAGATGCAAGAGGAAGAGAGGCTATTTCAGGAGAAGGAATTTGAACAAGCATTTTTTAGGGAATTTTGGCCAGAAAaTGTTTGATACATTAACTCTACATATCATCATTGTTAAGTAAATTCAGATTCTTTGTCAAAAGCCTTTGCAGTCACCAAGTAGAGTTTGTAAATATGATTACA

mRNA sequence

GAGAGAACTTACTACCTCAATGGAAAGTCGCCATTTTTGCAAGGTGTCATCCGTTCTTCAGAATCAAGAAACAAAAAAAAGTTAAAAACTCCACACGCTAGGGCTTAGGCGAAAGTGCGAAAGTTCTACAAATTTCGAATTGGGTTCGGTCTTTGTAAACAAAATAGTCGTCTAAGAATTATCTTAAGATTACCCACAAGTCCTTTTTCAGGAGGAAGAATGGATTTGGAGTCGGGCCCAGGGGGTTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCGGCTTTTGAAGAAGCATGGTTGGAGGGAAGGGACGGGCCTTGGAGTTTCTGAGCAGGGTAGACTGGAACCCGTACAGGCGTCTGTGAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGTGAAGAAGAAAATTAAAGAAACTACAGATAATGCAACCTCAGATAGAAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGCGAAGGGGCTAACGAAAAGGATGAGGAAGATGCAAGAGGAAGAGAGGCTATTTCAGGAGAAGGAATTTGAACAAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGATACATTAACTCTACATATCATCATTGTTAAGTAAATTCAGATTCTTTGTCAAAAGCCTTTGCAGTCACCAAGTAGAGTTTGTAAATATGATTACA

Coding sequence (CDS)

ATGGATTTGGAGTCGGGCCCAGGGGGTTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCGGCTTTTGAAGAAGCATGGTTGGAGGGAAGGGACGGGCCTTGGAGTTTCTGAGCAGGGTAGACTGGAACCCGTACAGGCGTCTGTGAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGTGAAGAAGAAAATTAAAGAAACTACAGATAATGCAACCTCAGATAGAAAAAaTAACCAGGAACGTCCTCCTCCAAAGAAAGCGAAGGGGCTAACGAAAAGGATGAGGAAGATGCAAGAGGAAGAGAGGCTATTTCAGGAGAAGGAATTTGAACAAGCATTTTTTAGGGAATTTTGGCCAGAAAaTGTTTGA

Protein sequence

MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREFWPENV*

Homology

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BLAST of Cucsa.281030 vs. Swiss-Prot
Match: GPT11_DANRE (G patch domain-containing protein 11 OS=Danio rerio GN=gpatch11 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-07
Identity = 33/96 (34.38%), Postives = 56/96 (58.33%), Query Frame = 1


Query: 14  AAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTD 73
           ++I S N GF LL+K G++ G GLG    GR+EPV  ++K ++ G+G ++VKK+ K   +
Sbjct: 66  SSIGSQNKGFALLQKMGYKAGQGLGKEGAGRVEPVPLNIKTDRGGIGMEEVKKR-KADEE 125

Query: 74  NATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQ 110
                RK + ++   KK+    +  ++ + EER  Q
Sbjct: 126 LQNYRRKVHMKQHLEKKSIEDFRVRKRTEREERQTQ 160

[Close]

BLAST of Cucsa.281030 vs. Swiss-Prot
Match: GPAN1_CAEEL (G patch domain and ankyrin repeat-containing protein 1 homolog OS=Caenorhabditis elegans GN=ZK1320.7 PE=3 SV=3)

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-07
Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 1


Query: 5   SGPGGSV-SAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK 64
           + PG +  S   I  SNIG+RL+   GW E  GLG +  G+  P++  +K N+ GLGA+K
Sbjct: 249 NAPGAAPQSGIQIGPSNIGYRLMCASGWTEEQGLGRNSDGQRFPIRTILKRNRAGLGAEK 308

Query: 65  VKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRK 101
           + KK+        +  KN +    P   K + K+  K
Sbjct: 309 LVKKVTHFGPFDRNAVKNLKVAKVPTTKKDIIKQKLK 345

[Close]

BLAST of Cucsa.281030 vs. Swiss-Prot
Match: SQS1_YARLI (Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SQS1 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-07
Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 1


Query: 13  AAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA 62
           A AID SNIG  LL+K GW  G GLG   +G  EP+ A VK +KRG+GA
Sbjct: 764 APAIDDSNIGRLLLQKMGWTTGEGLGAQSRGISEPIIAKVKISKRGIGA 812

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BLAST of Cucsa.281030 vs. Swiss-Prot
Match: GPTC8_HUMAN (G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 8.6e-07
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 1


Query: 16 IDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 61
          I+S NIG RLL+KHGW+ G GLG S QGR +P+   VK +  G+G
Sbjct: 38 IESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82

[Close]

BLAST of Cucsa.281030 vs. Swiss-Prot
Match: GPTC8_MOUSE (G patch domain-containing protein 8 OS=Mus musculus GN=Gpatch8 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.6e-07
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 1


Query: 16 IDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 61
          I+S NIG RLL+KHGW+ G GLG S QGR +P+   VK +  G+G
Sbjct: 38 IESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82

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BLAST of Cucsa.281030 vs. TrEMBL
Match: A0A0A0KPR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579590 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.7e-65
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1


Query: 1   MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60
           MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 61  ADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFRE 120
           ADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFRE
Sbjct: 61  ADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFRE 120

Query: 121 FWPENV 127
           FWPENV
Sbjct: 121 FWPENV 126

[Close]

BLAST of Cucsa.281030 vs. TrEMBL
Match: W9RLL6_9ROSA (Protein SQS1 OS=Morus notabilis GN=L484_023067 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.1e-40
Identity = 89/122 (72.95%), Postives = 101/122 (82.79%), Query Frame = 1


Query: 8   GGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKK 67
           G S SAAAIDSSNIGFRLLKKHGW+EGTGLG+SEQGRLEPV+A +KNNKRGLGADKVKKK
Sbjct: 31  GSSGSAAAIDSSNIGFRLLKKHGWKEGTGLGISEQGRLEPVEAHLKNNKRGLGADKVKKK 90

Query: 68  IKETTDNATS---DRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREFWPE 127
             +  D  T+   D K+ QE  P KK+K L+K+MRKMQE ER  QEKEFE+AFFREFWP+
Sbjct: 91  ALKPLDTKTTTIPDGKSEQE-VPLKKSKPLSKKMRKMQELERQVQEKEFERAFFREFWPD 150

[Close]

BLAST of Cucsa.281030 vs. TrEMBL
Match: I1LFB7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G288900 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.6e-38
Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 1


Query: 13  AAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKK-IKET 72
           A AI+SSNIGF+LLKKHGW+EGTGLGVSEQGRLEPV+  VKNNKRGLGADK KKK +K  
Sbjct: 8   ATAINSSNIGFQLLKKHGWKEGTGLGVSEQGRLEPVETHVKNNKRGLGADKAKKKVVKAK 67

Query: 73  TDNATSDRKNN-QERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREFWPENV 127
            D + S + NN Q+  P KK+K L+KRMRKMQE E+  +EKEFE+AFFREFWPENV
Sbjct: 68  PDQSDSSKGNNQQDHLPQKKSKTLSKRMRKMQEFEKKMREKEFERAFFREFWPENV 123

[Close]

BLAST of Cucsa.281030 vs. TrEMBL
Match: A0A0B2RSF5_GLYSO (G patch domain-containing protein 8 OS=Glycine soja GN=glysoja_013556 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.6e-38
Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 1


Query: 13  AAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKK-IKET 72
           A AI+SSNIGF+LLKKHGW+EGTGLGVSEQGRLEPV+  VKNNKRGLGADK KKK +K  
Sbjct: 8   ATAINSSNIGFQLLKKHGWKEGTGLGVSEQGRLEPVETHVKNNKRGLGADKAKKKVVKAK 67

Query: 73  TDNATSDRKNN-QERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREFWPENV 127
            D + S + NN Q+  P KK+K L+KRMRKMQE E+  +EKEFE+AFFREFWPENV
Sbjct: 68  PDQSDSSKGNNQQDHLPQKKSKTLSKRMRKMQEFEKKMREKEFERAFFREFWPENV 123

[Close]

BLAST of Cucsa.281030 vs. TrEMBL
Match: A0A0B0N7E6_GOSAR (G patch domain-containing 8 OS=Gossypium arboreum GN=F383_14496 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-37
Identity = 81/115 (70.43%), Postives = 96/115 (83.48%), Query Frame = 1


Query: 12  SAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKET 71
           S+ AIDSSNIGF+LLKKHGW+EGTGLGVSEQGRLEPVQA VKNNK+GLGA+K K+K  + 
Sbjct: 7   SSTAIDSSNIGFQLLKKHGWKEGTGLGVSEQGRLEPVQAYVKNNKKGLGAEK-KRKNPKP 66

Query: 72  TDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREFWPENV 127
           +D   S  KN++E+   KK K L+KRMRKMQE E+  QEKEFE+AFFREFWP+NV
Sbjct: 67  SDPPDSKPKNDEEQKTTKKTKALSKRMRKMQEREKQMQEKEFERAFFREFWPDNV 120

[Close]

BLAST of Cucsa.281030 vs. TAIR10
Match: AT5G08535.1 (AT5G08535.1 D111/G-patch domain-containing protein)

HSP 1 Score: 131.7 bits (330), Expect = 3.1e-31
Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 1


Query: 8   GGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKK 67
           G S S AAI+SSNIGF+LLKKHGW+EGTGLG++EQG L P+QA  K+NKRG+GA +  K+
Sbjct: 31  GSSSSLAAINSSNIGFQLLKKHGWKEGTGLGIAEQGILVPLQAEPKHNKRGVGAKQPAKR 90

Query: 68  KIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREFWPENV 127
           K+ +            ++    K++K L+K+MRKM E E+  QEKEFE+AFFREFWP+NV
Sbjct: 91  KVAQ---------PQAKDEEVSKQSKKLSKKMRKMMEHEKHLQEKEFERAFFREFWPDNV 141

[Close]

BLAST of Cucsa.281030 vs. TAIR10
Match: AT3G52350.1 (AT3G52350.1 D111/G-patch domain-containing protein)

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-27
Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = 1


Query: 13  AAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKIKET 72
           + AI SSNIGF+LLKKHGW+EGTGLG++EQG L P+QA  K+NK+GLGA+K  K+K  + 
Sbjct: 74  STAISSSNIGFQLLKKHGWKEGTGLGITEQGILVPLQAEPKHNKQGLGAEKPAKRKPAQP 133

Query: 73  TDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREFWPENV 127
            D A  +          KK+K L+K++ KM E E+   E EFE+AF REFWP+NV
Sbjct: 134 QDTAFEE--------VSKKSKKLSKKLVKMIEHEKRLAENEFERAFRREFWPDNV 180

[Close]

BLAST of Cucsa.281030 vs. TAIR10
Match: AT5G26610.1 (AT5G26610.1 D111/G-patch domain-containing protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.6e-09
Identity = 40/122 (32.79%), Postives = 63/122 (51.64%), Query Frame = 1


Query: 1   MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60
           +DLE     S+    I SSN+GFRLL+K GW+ G GLG  EQG  EP+++ +++ + GLG
Sbjct: 50  VDLEDVEQASLDVK-ISSSNVGFRLLQKMGWK-GKGLGKQEQGITEPIKSGIRDRRLGLG 109

Query: 61  ADKVKK--KIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFF 120
             +       +E       D +  +     KK + L +R +K+Q +      KE  + F+
Sbjct: 110 KQEEDDYFTAEENIQRKKLDIEIEETEEIAKKREVLAEREQKIQSD-----VKEIRKVFY 164

[Close]

BLAST of Cucsa.281030 vs. TAIR10
Match: AT3G54230.2 (AT3G54230.2 suppressor of abi3-5)

HSP 1 Score: 53.9 bits (128), Expect = 8.3e-08
Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 1


Query: 15  AIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK 66
           AID SN+G R+L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Sbjct: 926 AIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQGVDRRAGLGSQQKK 976

[Close]

BLAST of Cucsa.281030 vs. TAIR10
Match: AT3G57910.1 (AT3G57910.1 D111/G-patch domain-containing protein)

HSP 1 Score: 50.4 bits (119), Expect = 9.2e-07
Identity = 26/70 (37.14%), Postives = 42/70 (60.00%), Query Frame = 1


Query: 16  IDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG-ADKVKKKIKETTDN 75
           I  SNIGF+LLK+ G++ G+ LG    GR EPV   ++ ++ G+G  D  K+K K+    
Sbjct: 91  IGESNIGFKLLKQMGYKPGSALGKQGSGRAEPVTMDIRRSRAGVGREDPHKEKKKKEEIE 150

Query: 76  ATSDRKNNQE 85
           A ++++   E
Sbjct: 151 AENEKRKVDE 160

[Close]

BLAST of Cucsa.281030 vs. NCBI nr
Match: gi|449458728|ref|XP_004147099.1| (PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 2.4e-65
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1


Query: 1   MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60
           MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 61  ADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFRE 120
           ADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFRE
Sbjct: 61  ADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFRE 120

Query: 121 FWPENV 127
           FWPENV
Sbjct: 121 FWPENV 126

[Close]

BLAST of Cucsa.281030 vs. NCBI nr
Match: gi|659090235|ref|XP_008445906.1| (PREDICTED: G patch domain-containing protein 11 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 3.2e-62
Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 1


Query: 1   MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60
           MDLESGPGGSVSAAAIDSSNIGF+LLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 61  ADKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFRE 120
           ADKVKKKIKET DNA SDRKNNQERPPPKK KGL+KRMRKMQEEERLFQEKEFE+AFFRE
Sbjct: 61  ADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEEERLFQEKEFERAFFRE 120

Query: 121 FWPENV 127
           FWPENV
Sbjct: 121 FWPENV 126

[Close]

BLAST of Cucsa.281030 vs. NCBI nr
Match: gi|703126398|ref|XP_010103571.1| (Protein SQS1 [Morus notabilis])

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-39
Identity = 89/122 (72.95%), Postives = 101/122 (82.79%), Query Frame = 1


Query: 8   GGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKK 67
           G S SAAAIDSSNIGFRLLKKHGW+EGTGLG+SEQGRLEPV+A +KNNKRGLGADKVKKK
Sbjct: 31  GSSGSAAAIDSSNIGFRLLKKHGWKEGTGLGISEQGRLEPVEAHLKNNKRGLGADKVKKK 90

Query: 68  IKETTDNATS---DRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREFWPE 127
             +  D  T+   D K+ QE  P KK+K L+K+MRKMQE ER  QEKEFE+AFFREFWP+
Sbjct: 91  ALKPLDTKTTTIPDGKSEQE-VPLKKSKPLSKKMRKMQELERQVQEKEFERAFFREFWPD 150

[Close]

BLAST of Cucsa.281030 vs. NCBI nr
Match: gi|719963103|ref|XP_010248673.1| (PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog [Nelumbo nucifera])

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-39
Identity = 83/116 (71.55%), Postives = 100/116 (86.21%), Query Frame = 1


Query: 12  SAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKET 71
           SA AIDSSNIGF+LLKK GW+EGTGLGVSEQGRLEP+Q  VKNNKRGLGA+KVKKK+   
Sbjct: 8   SATAIDSSNIGFQLLKKCGWKEGTGLGVSEQGRLEPLQTHVKNNKRGLGAEKVKKKVLHI 67

Query: 72  TDNATSDRKN-NQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREFWPENV 127
           +D+ T+ RKN N++  P KK K ++KR+RKMQEEE+ +QEKEFE+AFFREFWP+NV
Sbjct: 68  SDDTTTARKNDNEQLQPRKKTKSVSKRVRKMQEEEKCWQEKEFERAFFREFWPDNV 123

[Close]

BLAST of Cucsa.281030 vs. NCBI nr
Match: gi|1009138677|ref|XP_015886712.1| (PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Ziziphus jujuba])

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38
Identity = 84/125 (67.20%), Postives = 103/125 (82.40%), Query Frame = 1


Query: 2   DLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA 61
           DLE   G S S+AAIDSSN+GF+LLKKHGW+EGTGLG+S+QGRLEPV+   KNNKRGLGA
Sbjct: 4   DLE---GFSGSSAAIDSSNVGFKLLKKHGWQEGTGLGISQQGRLEPVETYWKNNKRGLGA 63

Query: 62  DKVKKKIKETTDNATSDRKNNQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREF 121
           +KVKKK  +  +   S+ KN+QE+ P KK+K L+K+MRKMQE E+  QEKEFE+AFFREF
Sbjct: 64  EKVKKKAVKPPETTDSNEKNDQEQ-PSKKSKALSKKMRKMQEFEKKLQEKEFERAFFREF 123

Query: 122 WPENV 127
           WP+NV
Sbjct: 124 WPDNV 124

The following BLAST results are available for this feature:

BLAST of Cucsa.281030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GPT11_DANRE	2.3e-07	34.38	G patch domain-containing protein 11 OS=Danio rerio GN=gpatch11 PE=2 SV=1	[more]
GPAN1_CAEEL	3.9e-07	34.02	G patch domain and ankyrin repeat-containing protein 1 homolog OS=Caenorhabditis...	[more]
SQS1_YARLI	3.9e-07	57.14	Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SQS1 PE=3 SV=1	[more]
GPTC8_HUMAN	8.6e-07	55.56	G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2	[more]
GPTC8_MOUSE	8.6e-07	55.56	G patch domain-containing protein 8 OS=Mus musculus GN=Gpatch8 PE=1 SV=1	[more]

BLAST of Cucsa.281030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPR8_CUCSA	1.7e-65	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579590 PE=4 SV=1	[more]
W9RLL6_9ROSA	7.1e-40	72.95	Protein SQS1 OS=Morus notabilis GN=L484_023067 PE=4 SV=1	[more]
I1LFB7_SOYBN	8.6e-38	71.55	Uncharacterized protein OS=Glycine max GN=GLYMA_10G288900 PE=4 SV=1	[more]
A0A0B2RSF5_GLYSO	8.6e-38	71.55	G patch domain-containing protein 8 OS=Glycine soja GN=glysoja_013556 PE=4 SV=1	[more]
A0A0B0N7E6_GOSAR	1.1e-37	70.43	G patch domain-containing 8 OS=Gossypium arboreum GN=F383_14496 PE=4 SV=1	[more]

BLAST of Cucsa.281030 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08535.1	3.1e-31	55.83	D111/G-patch domain-containing protein	[more]
AT3G52350.1	2.7e-27	53.91	D111/G-patch domain-containing protein	[more]
AT5G26610.1	2.6e-09	32.79	D111/G-patch domain-containing protein	[more]
AT3G54230.2	8.3e-08	49.02	suppressor of abi3-5	[more]
AT3G57910.1	9.2e-07	37.14	D111/G-patch domain-containing protein	[more]

BLAST of Cucsa.281030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458728\|ref\|XP_004147099.1\|	2.4e-65	100.00	PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog [Cucum...	[more]
gi\|659090235\|ref\|XP_008445906.1\|	3.2e-62	95.24	PREDICTED: G patch domain-containing protein 11 [Cucumis melo]	[more]
gi\|703126398\|ref\|XP_010103571.1\|	1.0e-39	72.95	Protein SQS1 [Morus notabilis]	[more]
gi\|719963103\|ref\|XP_010248673.1\|	1.0e-39	71.55	PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog [Nelum...	[more]
gi\|1009138677\|ref\|XP_015886712.1\|	1.5e-38	67.20	PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isofor...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000467	G_patch_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.281030.1	Cucsa.281030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 19..61 score: 1.3
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 16..62 score: 7.8
IPR000467	G-patch domain	PROFILE	PS50174	G_PATCH	coord: 18..64 score: 17
None	No IPR available	unknown	Coil	Coil	coord: 91..111 scor
None	No IPR available	PANTHER	PTHR23106	FAMILY NOT NAMED	coord: 10..126 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.281030	Cla022879	Watermelon (97103) v1	cgywmB515
Cucsa.281030	Csa5G579590	Cucumber (Chinese Long) v2	cgycuB398
Cucsa.281030	MELO3C011766	Melon (DHL92) v3.5.1	cgymeB469
Cucsa.281030	ClCG11G012760	Watermelon (Charleston Gray)	cgywcgB483
Cucsa.281030	CSPI05G20380	Wild cucumber (PI 183967)	cgycpiB421
Cucsa.281030	CmaCh18G008190	Cucurbita maxima (Rimu)	cgycmaB0776
Cucsa.281030	CmoCh18G008210	Cucurbita moschata (Rifu)	cgycmoB0772
Cucsa.281030	Lsi04G007730	Bottle gourd (USVL1VR-Ls)	cgylsiB454
Cucsa.281030	Cp4.1LG09g04940	Cucurbita pepo (Zucchini)	cgycpeB0733
Cucsa.281030	MELO3C011766.2	Melon (DHL92) v3.6.1	cgymedB465
Cucsa.281030	CsaV3_5G029140	Cucumber (Chinese Long) v3	cgycucB428
Cucsa.281030	Cla97C11G218630	Watermelon (97103) v2	cgywmbB486
Cucsa.281030	Bhi07G000897	Wax gourd	cgywgoB567
Cucsa.281030	Carg14449	Silver-seed gourd	carcgyB0814

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.281030	Cucurbita maxima (Rimu)	cgycmaB0779
Cucsa.281030	Cucurbita moschata (Rifu)	cgycmoB0774
Cucsa.281030	Cucurbita pepo (Zucchini)	cgycpeB0736
Cucsa.281030	Silver-seed gourd	carcgyB0964
Cucsa.281030	Wax gourd	cgywgoB565