Cucsa.273350 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.273350
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Transmembrane protein, putative
Location	scaffold02511 : 465933 .. 467124 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAGAAAGAGAACAGCAAACAAAATTAAACTTCACCCATTTAGATTTTTGAATCAAAAAAACTCTTTTTTGGGTTTTGGATTTGGCGGATGCACTCATCACCTTCTCCTGTGATTCATATTCACCTATGCATTTTCTTAGGGTGTCGGTGGTGGTGCTACATCCTTCGCCTCCCCCACCCCCACCCATACCACCATTTGTAGGGTTTTGTTTTTGATTCCATAGACGGCGACCGAGAAAATCGATGTTCTTCGTTGCTGCTACATTGTCATTTGTAGATCCTGCTACCTTCGATCTCACCACCCTCTCCTTCATTGCCCTAATCCTTCTCCTTTCTCTTCTCTCTCTCTCCTTCATCTTCCATCTCCGTCTCAAATCCCGAACCTCCCACCATCTTCAACGCTTCAATTCCCTCTGGACAGTCCGTTTCCTCCTTGTCTCATTCATCTCATTTTGGGCACTCAATGAACTCCTCCGCCTCTCCTTCTTTCTCCCCTCTCTCCCTTCCCTTCATCAATCAACTCTCTGCCAAATCCATTCTCTTCTCTCCCTCGGCCTCTTCCAGCCTTGTTTTCTCATCATCCTCCTCTTTCTCATCAATGCCTCTCCCAACAACAATAACAATAACGACAATACTACTACTTCTCACCAACATCATCATCCCCCTATTCCCTTTCTTCTTCTTCTTTCATTCTCTATTTTCCTTCTCCATCTTCTCATCGTCTTCTATTCCCCTTTCAACCATAAACTCCCTCCCTCCTTCAATCAGAGCTATCTCCTCATCAAACATGATTCTAACAACACTCCCGTTTTCTGCTCCTACCCTCTTCTGAGTTCCATTGCCTTTGCTGCCTTCGCCCTTGGCTACATGCTCTGTTTCTTTTTCTCCACATGGAAAGTCGCCTCCATGGTCATCAACAAGTCCCTCCGGATTCGCCTTTACGCCCTCGCTTTCACCGTCATGATTTCCTTGCCCTTACAGATTATATTCCTTGGCCTCTCTGCCCTATGGAGACCTGATCAACCTACTTACTCTCTCCTTTCTCTTCTTGTGTTTCTGAGTGCGTTTCTATGTGCCACTGCCGGGGAGGGCATCTTGGTCATCGTTCCCATCGCCGATTCCTTGGCTGCCGGAGATTCTTCCTTCGAGGATTCTGGTCACCCTTTGAAGACCGCTGGCGACGGCTCTTGA

mRNA sequence

GGGAGAAAGAGAACAGCAAACAAAATTAAACTTCACCCATTTAGATTTTTGAATCAAAAAAACTCTTTTTTGGGTTTTGGATTTGGCGGATGCACTCATCACCTTCTCCTGTGATTCATATTCACCTATGCATTTTCTTAGGGTGTCGGTGGTGGTGCTACATCCTTCGCCTCCCCCACCCCCACCCATACCACCATTTGTAGGGTTTTGTTTTTGATTCCATAGACGGCGACCGAGAAAATCGATGTTCTTCGTTGCTGCTACATTGTCATTTGTAGATCCTGCTACCTTCGATCTCACCAccctctccttcattgccctaatccttctcctttctcttctctctctctccttcatcttccatctccgtctcAAATCCCGAACCTCCCACCATCTTCAACGCTTCAATTCCCTCTGGACAGTCCGTTTCCTCCTTGTCTCATTCATCTCATTTTGGGCACTCAATGAACTCCTCCGCCTCTCCTTCTTTCTCCCCTCTCTCCCTTCCCTTCATCAATCAACTCTCTGCCAAATCCATTCTCTTCTCTCCCTCGGCCTCTTCCAGCCTTGTTTTCTCATCATCCTCCTCTTTCTCATCAATGCCTCTCCCAACAACAATAACAATAACGACAATACTACTACTTCTCACCAACATCATCATCCCCCTAttccctttcttcttcttctttcattctctattttccttctccatcttctcatcgtcttctattcccctttcAACCATAAACTCCCTCCCTCCTTCAATCAGAGCTATCTCCTCATCAAACATGATTCTAACAACACTCCCGTTTTCTGCTCCTACCCTCTTCTGAGTTCCATTGCCTTTGCTGCCTTCGCCCTTGGCTACATGCTCTGTTTCTTTTTCTCCACATGGAAAGTCGCCTCCATGGTCATCAACAAGTCCCTCCGGATTCGCCTTTACGCCCTCGCTTTCACCGTCATGATTTCCTTGCCCTTACAGATTATATTCCTTGGCCTCTCTGCCCTATGGAGACCTGATCAACCTACTTACTCTCTCCTTTCTCTTCTTGTGTTTCTGAGTGCGTTTCTATGTGCCACTGCCGGGGAGGGCATCTTGGTCATCGTTCCCATCGCCGATTCCTTGGCTGCCGGAGATTCTTCCTTCGAGGATTCTGGTCACCCTTTGAAGACCGCTGGCGACGGCTCTTGA

Coding sequence (CDS)

ATGTTCTTCGTTGCTGCTACATTGTCATTTGTAGATCCTGCTACCTTCGATCTCACCACCCTCTCCTTCATTGCCCTAATCCTTCTCCTTTCTCTTCTCTCTCTCTCCTTCATCTTCCATCTCCGTCTCAAATCCCGAACCTCCCACCATCTTCAACGCTTCAATTCCCTCTGGACAGTCCGTTTCCTCCTTGTCTCATTCATCTCATTTTGGGCACTCAATGAACTCCTCCGCCTCTCCTTCTTTCTCCCCTCTCTCCCTTCCCTTCATCAATCAACTCTCTGCCAAATCCATTCTCTTCTCTCCCTCGGCCTCTTCCAGCCTTGTTTTCTCATCATCCTCCTCTTTCTCATCAATGCCTCTCCCAACAACAATAACAATAACGACAATACTACTACTTCTCACCAACATCATCATCCCCCTATTCCCTTTCTTCTTCTTCTTTCATTCTCTATTTTCCTTCTCCATCTTCTCATCGTCTTCTATTCCCCTTTCAACCATAAACTCCCTCCCTCCTTCAATCAGAGCTATCTCCTCATCAAACATGATTCTAACAACACTCCCGTTTTCTGCTCCTACCCTCTTCTGAGTTCCATTGCCTTTGCTGCCTTCGCCCTTGGCTACATGCTCTGTTTCTTTTTCTCCACATGGAAAGTCGCCTCCATGGTCATCAACAAGTCCCTCCGGATTCGCCTTTACGCCCTCGCTTTCACCGTCATGATTTCCTTGCCCTTACAGATTATATTCCTTGGCCTCTCTGCCCTATGGAGACCTGATCAACCTACTTACTCTCTCCTTTCTCTTCTTGTGTTTCTGAGTGCGTTTCTATGTGCCACTGCCGGGGAGGGCATCTTGGTCATCGTTCCCATCGCCGATTCCTTGGCTGCCGGAGATTCTTCCTTCGAGGATTCTGGTCACCCTTTGAAGACCGCTGGCGACGGCTCTTGA

Protein sequence

MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFLPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINASPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPSFNQSYLLIKHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVMISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAGDSSFEDSGHPLKTAGDGS*

Homology

[Close]

BLAST of Cucsa.273350 vs. TrEMBL
Match: A0A0A0KXN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089790 PE=4 SV=1)

HSP 1 Score: 626.3 bits (1614), Expect = 2.0e-176
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1


Query: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV 60
           MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV
Sbjct: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV 60

Query: 61  RFLLVSFISFWALNELLRLSFFLPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINA 120
           RFLLVSFISFWALNELLRLSFFLPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINA
Sbjct: 61  RFLLVSFISFWALNELLRLSFFLPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINA 120

Query: 121 SPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPSFNQSYLLI 180
           SPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPSFNQSYLLI
Sbjct: 121 SPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPSFNQSYLLI 180

Query: 181 KHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVM 240
           KHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVM
Sbjct: 181 KHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVM 240

Query: 241 ISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAGDSS 300
           ISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAGDSS
Sbjct: 241 ISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAGDSS 300

Query: 301 FEDSGHPLKTAGDGS 316
           FEDSGHPLKTAGDGS
Sbjct: 301 FEDSGHPLKTAGDGS 315

[Close]

BLAST of Cucsa.273350 vs. TrEMBL
Match: G7J878_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_3g092200 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.6e-69
Identity = 140/299 (46.82%), Postives = 195/299 (65.22%), Query Frame = 1


Query: 7   TLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVS 66
           TLS +  + FDLTT++ I+ +++LS+LSL FIFHLRLKS++  +LQ FNSLWTVRFLLV 
Sbjct: 6   TLSPILTSAFDLTTVTLISSLIVLSVLSLCFIFHLRLKSKSLTYLQGFNSLWTVRFLLVL 65

Query: 67  FISFWALNELLRLSFFL--------PSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLI 126
           FI FW + EL RL FF         PSL    Q+ LC+IH + SLG F+P FL+ LLFL+
Sbjct: 66  FIFFWCIIELFRLPFFRRKYLYPLSPSLDITQQANLCKIHIVFSLGFFEPAFLLTLLFLL 125

Query: 127 NASPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPSFNQSYL 186
           NAS      ND            + F+      + +L  L+V+++P  H++P    Q+++
Sbjct: 126 NASIRKKTPNDGWA---------VTFVFSTCLPLGILQGLLVYFNPLEHRVPALLRQTFV 185

Query: 187 LIKHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFT 246
           +++ D+    V C+YP L+S+ FAAF+  Y     FS WKV S+VINK LRIR+YAL   
Sbjct: 186 ILEDDT----VLCAYPFLNSVVFAAFSAAYCAWLLFSCWKVLSLVINKGLRIRIYALGSV 245

Query: 247 VMISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAG 298
           V+++LPLQ++ L  + LW P+   Y ++SL+VF  AF CA AGEGILVI P++D+LAAG
Sbjct: 246 VLVALPLQVVSLAFTVLWSPEDDIYGVVSLVVFFCAFFCAVAGEGILVIKPVSDALAAG 291

[Close]

BLAST of Cucsa.273350 vs. TrEMBL
Match: V7AW84_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G049800g PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.7e-69
Identity = 143/296 (48.31%), Postives = 190/296 (64.19%), Query Frame = 1


Query: 14  ATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWAL 73
           + FDL T++FI+ +++LS+LS+SFIFHLR KS++  HLQ FNSLWTVRFLLV FI  W++
Sbjct: 12  SVFDLVTVTFISGLIILSVLSISFIFHLRFKSKSITHLQNFNSLWTVRFLLVLFIFLWSI 71

Query: 74  NELLRLSFF--------LPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINASPNNN 133
            ELLRL FF        LPS     Q++LC++H +LSLG F+P FL+ LLFL+NAS    
Sbjct: 72  TELLRLPFFRRKYLYPFLPSFTISQQASLCKVHVVLSLGFFEPAFLVTLLFLLNASIKKK 131

Query: 134 NNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPS----FNQSYLLIK 193
             ND            I F+LL    I +L  L++F+SP  +++P      FN  Y    
Sbjct: 132 TPNDAWA---------ITFVLLTCLPIAILQALLIFFSPLENRVPVETSVIFNDGY---- 191

Query: 194 HDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVMI 253
                  V C+YP LSS+ FAAF + Y     FS W+V S+VINK LR+R+Y LA  +++
Sbjct: 192 ---GFQTVLCAYPFLSSVVFAAFGVTYCTWLLFSCWRVLSLVINKGLRVRIYVLASIMLV 251

Query: 254 SLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAG 298
           +LP+QI+ LG S LW P Q  Y ++SL+ FL AF CAT GEGILVI PI+D+L AG
Sbjct: 252 ALPMQIVSLGFSVLWSPHQEVYGVISLVGFLGAFCCATTGEGILVIKPISDALDAG 291

[Close]

BLAST of Cucsa.273350 vs. TrEMBL
Match: A0A0L9UDM1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g084500 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.1e-69
Identity = 143/294 (48.64%), Postives = 190/294 (64.63%), Query Frame = 1


Query: 16  FDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNE 75
           FDL T++FI+ +++LS+LS+SFIFHLRLKS++  HLQ FNSLWTVRFLLV FI  W++ E
Sbjct: 14  FDLVTVTFISGLIILSVLSISFIFHLRLKSKSLTHLQNFNSLWTVRFLLVLFIFLWSITE 73

Query: 76  LLRLSFF--------LPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINASPNNNNN 135
           LLRL FF        LP+     Q+ LC++H +LSLG F+P FL+ LLFL+NAS      
Sbjct: 74  LLRLPFFRRKYIYTFLPTFTISQQANLCKVHIVLSLGFFEPAFLVTLLFLLNASIKKKTP 133

Query: 136 NDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPS----FNQSYLLIKHD 195
           ND            I F+LL+   I  L  L++ +SP  +++P      FN  Y      
Sbjct: 134 NDAWA---------ITFVLLICLPIATLQALLISFSPLENRVPVETSVIFNDGY------ 193

Query: 196 SNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVMISL 255
                V C++P L+S+AFA F + Y   F FS W+V S+VINK LR+R+Y LA  +++++
Sbjct: 194 -GFDTVLCTHPFLTSVAFAVFGITYCTWFLFSCWRVLSLVINKGLRVRIYVLASIILVAV 253

Query: 256 PLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAG 298
           PLQII LG S LW P Q  Y ++SL+ FLSAF CAT GEGILVI PI+D+L AG
Sbjct: 254 PLQIISLGFSVLWSPHQEVYGIVSLVAFLSAFCCATIGEGILVIKPISDALDAG 291

[Close]

BLAST of Cucsa.273350 vs. TrEMBL
Match: A0A0S3RDY2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G164600 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.1e-69
Identity = 143/294 (48.64%), Postives = 190/294 (64.63%), Query Frame = 1


Query: 16  FDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNE 75
           FDL T++FI+ +++LS+LS+SFIFHLRLKS++  HLQ FNSLWTVRFLLV FI  W++ E
Sbjct: 14  FDLVTVTFISGLIILSVLSISFIFHLRLKSKSLTHLQNFNSLWTVRFLLVLFIFLWSITE 73

Query: 76  LLRLSFF--------LPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINASPNNNNN 135
           LLRL FF        LP+     Q+ LC++H +LSLG F+P FL+ LLFL+NAS      
Sbjct: 74  LLRLPFFRRKYIYTFLPTFTISQQANLCKVHIVLSLGFFEPAFLVTLLFLLNASIKKKTP 133

Query: 136 NDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPS----FNQSYLLIKHD 195
           ND            I F+LL+   I  L  L++ +SP  +++P      FN  Y      
Sbjct: 134 NDAWA---------ITFVLLICLPIATLQALLISFSPLENRVPVETSVIFNDGY------ 193

Query: 196 SNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVMISL 255
                V C++P L+S+AFA F + Y   F FS W+V S+VINK LR+R+Y LA  +++++
Sbjct: 194 -GFDTVLCTHPFLTSVAFAVFGITYCTWFLFSCWRVLSLVINKGLRVRIYVLASIILVAV 253

Query: 256 PLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAG 298
           PLQII LG S LW P Q  Y ++SL+ FLSAF CAT GEGILVI PI+D+L AG
Sbjct: 254 PLQIISLGFSVLWSPHQEVYGIVSLVAFLSAFCCATIGEGILVIKPISDALDAG 291

[Close]

BLAST of Cucsa.273350 vs. TAIR10
Match: AT1G57680.1 (AT1G57680.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 132.5 bits (332), Expect = 4.6e-31
Identity = 91/300 (30.33%), Postives = 147/300 (49.00%), Query Frame = 1


Query: 13  PATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQR--FNSLWTVRFLLVSFISF 72
           P  F + T+  +AL++LL LL +++ F+ +   R   ++Q   F+  W +R   + F  +
Sbjct: 8   PDAFGVVTICLVALLVLLGLLCIAYSFYFQSHVRKQGYIQLGYFSGPWIIRITFILFAIW 67

Query: 73  WALNELLRLSFF------LPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINASPNN 132
           WA+ E+ RLS        L  L    Q  +C+ + + +LG  +PC  + L+FL+ A    
Sbjct: 68  WAVGEIFRLSLLRRHRRLLSGLDLRWQENVCKWYIVSNLGFAEPCLFLTLMFLLRAPLKM 127

Query: 133 NNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFY-SPFNH------KLPPSFNQSY 192
            +       S + +     +++L    +  L L +V   S  N       KLP  F ++Y
Sbjct: 128 ESG----ALSGKWNRDTAGYIILYCLPMLALQLAVVLSESRLNGGSGSYVKLPHDFTRTY 187

Query: 193 --LLIKHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYAL 252
             ++I HD       C+YPLLS+I    FA       F+   ++  +VINK L+ R+Y L
Sbjct: 188 SRVIIDHDE---VALCTYPLLSTILLGVFAAVLTAYLFWLGRQILKLVINKRLQKRVYTL 247

Query: 253 AFTVMISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLA 296
            F+V   LPL+I+ L LS L   D+  +  LS L FLS F        +LV  P++DS+A
Sbjct: 248 IFSVSSFLPLRIVMLCLSVLTAADKIIFEALSFLAFLSLFCFCVVSICLLVYFPVSDSMA 300

[Close]

BLAST of Cucsa.273350 vs. NCBI nr
Match: gi|700198451|gb|KGN53609.1| (hypothetical protein Csa_4G089790 [Cucumis sativus])

HSP 1 Score: 626.3 bits (1614), Expect = 2.9e-176
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1


Query: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV 60
           MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV
Sbjct: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV 60

Query: 61  RFLLVSFISFWALNELLRLSFFLPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINA 120
           RFLLVSFISFWALNELLRLSFFLPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINA
Sbjct: 61  RFLLVSFISFWALNELLRLSFFLPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINA 120

Query: 121 SPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPSFNQSYLLI 180
           SPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPSFNQSYLLI
Sbjct: 121 SPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPSFNQSYLLI 180

Query: 181 KHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVM 240
           KHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVM
Sbjct: 181 KHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVM 240

Query: 241 ISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAGDSS 300
           ISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAGDSS
Sbjct: 241 ISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAGDSS 300

Query: 301 FEDSGHPLKTAGDGS 316
           FEDSGHPLKTAGDGS
Sbjct: 301 FEDSGHPLKTAGDGS 315

[Close]

BLAST of Cucsa.273350 vs. NCBI nr
Match: gi|659101582|ref|XP_008451684.1| (PREDICTED: uncharacterized protein LOC103492910 [Cucumis melo])

HSP 1 Score: 583.6 bits (1503), Expect = 2.1e-163
Identity = 298/315 (94.60%), Postives = 303/315 (96.19%), Query Frame = 1


Query: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV 60
           MFFVAATLSFVDPATFDLTTLSFIALILLLSLLS+SFIFHL LKSRTSHHLQRFNSLWTV
Sbjct: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSISFIFHLHLKSRTSHHLQRFNSLWTV 60

Query: 61  RFLLVSFISFWALNELLRLSFFLPSLPSLHQSTLCQIHSLLSLGLFQPCFLIILLFLINA 120
           RFLLVSFISFWALNE LRLSFFLPS  SLHQSTLCQIH+LLSLGLFQPCFLIILLFLINA
Sbjct: 61  RFLLVSFISFWALNEFLRLSFFLPSHHSLHQSTLCQIHALLSLGLFQPCFLIILLFLINA 120

Query: 121 SPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPSFNQSYLLI 180
           SPNNNNNN+N TTSHQ+H PPIP LLLLS SIFLLHLLIVFYSPFNHKLPPSFNQSYLLI
Sbjct: 121 SPNNNNNNNNNTTSHQYH-PPIPLLLLLSISIFLLHLLIVFYSPFNHKLPPSFNQSYLLI 180

Query: 181 KHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLYALAFTVM 240
           KHDSNNT VFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRL+ALAFTVM
Sbjct: 181 KHDSNNTIVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLHALAFTVM 240

Query: 241 ISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAGDSS 300
           ISL LQIIFLGLSALWRPD PTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAGDS 
Sbjct: 241 ISLALQIIFLGLSALWRPDHPTYSLLSLLVFLSAFLCATAGEGILVIVPIADSLAAGDSC 300

Query: 301 FEDSGHPLKTAGDGS 316
           FEDSGHPLKTAGDGS
Sbjct: 301 FEDSGHPLKTAGDGS 314

[Close]

BLAST of Cucsa.273350 vs. NCBI nr
Match: gi|694364635|ref|XP_009361349.1| (PREDICTED: uncharacterized protein LOC103951646 [Pyrus x bretschneideri])

HSP 1 Score: 279.6 bits (714), Expect = 6.6e-72
Identity = 156/324 (48.15%), Postives = 206/324 (63.58%), Query Frame = 1


Query: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV 60
           MFF+ +T  F+D A FD+ TL FI+ +++LSLLSLSFIFHL  KSRT+ HLQ FNSLWTV
Sbjct: 1   MFFIPST-PFLDSA-FDVATLLFISALIVLSLLSLSFIFHLCFKSRTALHLQHFNSLWTV 60

Query: 61  RFLLVSFISFWALNELLRLSF--------FLPSLPSLHQSTLCQIHSLLSLGLFQPCFLI 120
           RFLLV FI FW+LNELLR+          FL  L S  +   C+IH  LSLG F+P FL+
Sbjct: 61  RFLLVIFIIFWSLNELLRIPTLRRTYLYPFLSVLGSFEEPQFCKIHVALSLGFFEPAFLV 120

Query: 121 ILLFLINASPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKL--- 180
            LLFL++ S      N +           I F+L     + L+ +L +F+ PF HKL   
Sbjct: 121 TLLFLVDVSTEKKTPNVSWA---------IAFVLATCLPMLLVQVLFLFFHPF-HKLHLP 180

Query: 181 -PPSFNQSYLLIKHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSL 240
            P  F ++Y++ K +  +  V C+YPLL++I FAAF   + + F FS WKV S+VINK L
Sbjct: 181 LPEIFVRNYVVHKVEYGSRMVSCTYPLLNTIMFAAFGGAFSMWFLFSCWKVLSLVINKGL 240

Query: 241 RIRLYALAFTVMISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIV 300
           R+R+Y LA TV++ LPLQII +G++ LW+PD P ++ +S   FLS  +CA  G+GILVI 
Sbjct: 241 RLRIYTLAATVLVPLPLQIILMGMTVLWKPDHPAFTAVSFAAFLSTLICAAVGQGILVIK 300

Query: 301 PIADSLAAGDSSFEDSGHPLKTAG 313
           PI DSLAAG      +G P  T G
Sbjct: 301 PIVDSLAAGGDCCRWNGKPKTTEG 312

[Close]

BLAST of Cucsa.273350 vs. NCBI nr
Match: gi|657946063|ref|XP_008382860.1| (PREDICTED: uncharacterized protein LOC103445621 [Malus domestica])

HSP 1 Score: 278.1 bits (710), Expect = 1.9e-71
Identity = 154/310 (49.68%), Postives = 206/310 (66.45%), Query Frame = 1


Query: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV 60
           MFF+ +T  F D A FD+ TL FI+ +++LSLLS+SFIF+L LKSRT+ HL+ FNSLWTV
Sbjct: 1   MFFIPST-PFXDSA-FDVATLLFISALIVLSLLSISFIFNLCLKSRTALHLRHFNSLWTV 60

Query: 61  RFLLVSFISFWALNELLRLSF--------FLPSLPSLHQSTLCQIHSLLSLGLFQPCFLI 120
           RFLLV FI FW+LNELLR+          FL  L S  +   C+IH  LSLGLF+P FL+
Sbjct: 61  RFLLVIFIIFWSLNELLRIPTLRRTYLYPFLSVLASFEEPQFCKIHVALSLGLFEPAFLV 120

Query: 121 ILLFLINASPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKL--- 180
            LLFL++AS      N +           I F+L     + L+ +L +F+ PF HKL   
Sbjct: 121 TLLFLVDASIERKTPNVSWA---------IAFVLATCLPMLLVQVLFLFFHPF-HKLHLP 180

Query: 181 -PPSFNQSYLLIKHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSL 240
            P  F ++Y++ K +  ++ V C+YPLL++I FAAF   Y + F FS W+V S+VINK L
Sbjct: 181 LPEIFVRNYVVQKVEYGSSMVSCTYPLLNTIMFAAFGGAYSMWFLFSCWRVLSLVINKGL 240

Query: 241 RIRLYALAFTVMISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIV 299
           R+R+Y LA TV++ LPLQII +G++ LW+PD P ++ LS   FLS  +CA  G+GILVI 
Sbjct: 241 RLRIYTLAATVLVPLPLQIILMGMTVLWKPDHPAFTALSFAAFLSTLICAAVGQGILVIK 298

[Close]

BLAST of Cucsa.273350 vs. NCBI nr
Match: gi|694321910|ref|XP_009352098.1| (PREDICTED: uncharacterized protein LOC103943513 [Pyrus x bretschneideri])

HSP 1 Score: 278.1 bits (710), Expect = 1.9e-71
Identity = 154/309 (49.84%), Postives = 206/309 (66.67%), Query Frame = 1


Query: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV 60
           MFF+ +T  F+D A FD+ TL FI+ +++LSLLS+SFIF+L LKSRT+ HL+ FNSLWTV
Sbjct: 1   MFFIPST-PFLDSA-FDVATLLFISALIVLSLLSISFIFNLCLKSRTALHLRHFNSLWTV 60

Query: 61  RFLLVSFISFWALNELLRLSFF--------LPSLPSLHQSTLCQIHSLLSLGLFQPCFLI 120
           RFLLV FI FW+LNELLR+  F        L  L S  +   C+IH  LSLGLF+P FL+
Sbjct: 61  RFLLVIFIIFWSLNELLRIPTFRRTYLYPFLSVLASFEEPQFCKIHVALSLGLFEPAFLV 120

Query: 121 ILLFLINASPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKL--- 180
            LLFL++AS      N +           I F+L     + L+ +L +F+ PF HKL   
Sbjct: 121 TLLFLVDASIEKKTPNVSWA---------IAFVLATCLPMLLVQVLFLFFHPF-HKLHLP 180

Query: 181 -PPSFNQSYLLIKHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSL 240
            P  F ++Y++ K +  ++ V C+YPLL++I FAAF   Y + F FS W+V S+VINK L
Sbjct: 181 LPEIFVRNYVVQKVEYGSSMVSCTYPLLNTIMFAAFGGAYSMWFLFSCWRVLSLVINKGL 240

Query: 241 RIRLYALAFTVMISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIV 298
           R+R+Y LA TV++ LPLQII +G++ LW+PD P ++ LS   FLS  +CA  G+GILVI 
Sbjct: 241 RLRIYTLAATVLVPLPLQIILMGMTVLWKPDHPAFTALSFAAFLSTLICAAVGQGILVIK 297

The following BLAST results are available for this feature:

BLAST of Cucsa.273350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXN9_CUCSA	2.0e-176	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089790 PE=4 SV=1	[more]
G7J878_MEDTR	1.6e-69	46.82	Transmembrane protein, putative OS=Medicago truncatula GN=MTR_3g092200 PE=4 SV=1	[more]
V7AW84_PHAVU	4.7e-69	48.31	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G049800g PE=4 SV=1	[more]
A0A0L9UDM1_PHAAN	8.1e-69	48.64	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g084500 PE=4 SV=1	[more]
A0A0S3RDY2_PHAAN	8.1e-69	48.64	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G164600 PE=...	[more]

BLAST of Cucsa.273350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G57680.1	4.6e-31	30.33	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of Cucsa.273350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700198451\|gb\|KGN53609.1\|	2.9e-176	100.00	hypothetical protein Csa_4G089790 [Cucumis sativus]	[more]
gi\|659101582\|ref\|XP_008451684.1\|	2.1e-163	94.60	PREDICTED: uncharacterized protein LOC103492910 [Cucumis melo]	[more]
gi\|694364635\|ref\|XP_009361349.1\|	6.6e-72	48.15	PREDICTED: uncharacterized protein LOC103951646 [Pyrus x bretschneideri]	[more]
gi\|657946063\|ref\|XP_008382860.1\|	1.9e-71	49.68	PREDICTED: uncharacterized protein LOC103445621 [Malus domestica]	[more]
gi\|694321910\|ref\|XP_009352098.1\|	1.9e-71	49.84	PREDICTED: uncharacterized protein LOC103943513 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019685	DUF2534

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.273350.1	Cucsa.273350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019685	Protein of unknown function DUF2534	PFAM	PF10749	DUF2534	coord: 214..251 score: 2.
None	No IPR available	PANTHER	PTHR34116	FAMILY NOT NAMED	coord: 5..300 score: 2.2E
None	No IPR available	PANTHER	PTHR34116:SF1	SUBFAMILY NOT NAMED	coord: 5..300 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.273350	Cla002418	Watermelon (97103) v1	cgywmB503
Cucsa.273350	Csa4G089790	Cucumber (Chinese Long) v2	cgycuB389
Cucsa.273350	MELO3C016080	Melon (DHL92) v3.5.1	cgymeB455
Cucsa.273350	ClCG07G009840	Watermelon (Charleston Gray)	cgywcgB475
Cucsa.273350	CSPI04G08270	Wild cucumber (PI 183967)	cgycpiB411
Cucsa.273350	CmaCh16G000230	Cucurbita maxima (Rimu)	cgycmaB0760
Cucsa.273350	Lsi07G003130	Bottle gourd (USVL1VR-Ls)	cgylsiB444
Cucsa.273350	Cp4.1LG14g07020	Cucurbita pepo (Zucchini)	cgycpeB0715
Cucsa.273350	MELO3C016080.2	Melon (DHL92) v3.6.1	cgymedB451
Cucsa.273350	CsaV3_4G008490	Cucumber (Chinese Long) v3	cgycucB418
Cucsa.273350	Cla97C07G136580	Watermelon (97103) v2	cgywmbB478

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.273350	Cucurbita maxima (Rimu)	cgycmaB0765
Cucsa.273350	Cucurbita moschata (Rifu)	cgycmoB0751
Cucsa.273350	Cucurbita moschata (Rifu)	cgycmoB0756
Cucsa.273350	Cucurbita pepo (Zucchini)	cgycpeB0718
Cucsa.273350	Silver-seed gourd	carcgyB1108
Cucsa.273350	Wax gourd	cgywgoB553
Cucsa.273350	Wax gourd	cgywgoB554