CmaCh16G000230 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G000230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transmembrane protein, putative
Location	Cma_Chr16 : 118702 .. 119637 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTCATTGCTCCTCTCTCTTTCTTGGATCCTGCGACCTTCGATCTCACCACCATCTCCTTCATCGCCCTTATCCTCCTCCTCTCTCTCCTCTCCCTCACCTTCATCTTCCACCTCCATCTCAAGTCCCGCACCTCCCACCATCTCCAGCGTTTCAATTCTCTCTGGACCGTCCGTTTCCTCCTCGTCGCCTTCATTGCATCATGGGCCCTCAACGAGCTCCTCCGCCTCTCCTTCTTCCGCCGCCGCTATCTCTACCCCTTCCTCCCCTCCCTAACCTCCCTCCACCAATCCACCCTCTGCCAACTCCATGCTCTCTTCTCCCTCGGCCTTTTCCAGCCCTGTTTTCTCATTACCCTTCTCTACCTCATCAATGCGTCCGCCAAGAACAGGACCCCTCACGACTACGGAGCTATTGCCTTCCTTCTCCTCGTCTCCATGCCCATTTTCTTCCTCCACCTTTTCATCGTCTTTTACACCCCCTTCAAGGACGAACTGCCCCCCGCCTTCAATCAGAGCTATCTCATTATACAGGACGGTTTTGACAATGCGACCGTCTTGTGCGCCTACCCACTCTTGAGTTCCATTGCCTTCTCTGGCTTCGGGATCGGCTACATGCTCTGTTTCTTGTTCTCTTGCTGGAAAGTCGCCTCCATGGTCATCAACAAGTCGCTCAGGATTCGAGTTTACGCCTTCGCTTTCACCATCATCATTTCCTTGCCCTTGCAGATTATATTTCTTGGCCTCTCGGGCCTCTGGAGGCCAGACGAGCCGGCTTACTCGGTGGTTGCGTTGGTTGTGTTTTTTTGTACGTTTCTATGCGCCGCCGCGGGGGAGGTCATTCTGGTCATTGTACCAATCGCCGATTCCTTGGCCGCCGGCGGGGTCTCTCGGTGGACCGGAGAGCCCTTGAAGATGTTGGGAGACGGTTGA

mRNA sequence

ATGTTCTTCATTGCTCCTCTCTCTTTCTTGGATCCTGCGACCTTCGATCTCACCACCATCTCCTTCATCGCCCTTATCCTCCTCCTCTCTCTCCTCTCCCTCACCTTCATCTTCCACCTCCATCTCAAGTCCCGCACCTCCCACCATCTCCAGCGTTTCAATTCTCTCTGGACCGTCCGTTTCCTCCTCGTCGCCTTCATTGCATCATGGGCCCTCAACGAGCTCCTCCGCCTCTCCTTCTTCCGCCGCCGCTATCTCTACCCCTTCCTCCCCTCCCTAACCTCCCTCCACCAATCCACCCTCTGCCAACTCCATGCTCTCTTCTCCCTCGGCCTTTTCCAGCCCTGTTTTCTCATTACCCTTCTCTACCTCATCAATGCGTCCGCCAAGAACAGGACCCCTCACGACTACGGAGCTATTGCCTTCCTTCTCCTCGTCTCCATGCCCATTTTCTTCCTCCACCTTTTCATCGTCTTTTACACCCCCTTCAAGGACGAACTGCCCCCCGCCTTCAATCAGAGCTATCTCATTATACAGGACGGTTTTGACAATGCGACCGTCTTGTGCGCCTACCCACTCTTGAGTTCCATTGCCTTCTCTGGCTTCGGGATCGGCTACATGCTCTGTTTCTTGTTCTCTTGCTGGAAAGTCGCCTCCATGGTCATCAACAAGTCGCTCAGGATTCGAGTTTACGCCTTCGCTTTCACCATCATCATTTCCTTGCCCTTGCAGATTATATTTCTTGGCCTCTCGGGCCTCTGGAGGCCAGACGAGCCGGCTTACTCGGTGGTTGCGTTGGTTGTGTTTTTTTGTACGTTTCTATGCGCCGCCGCGGGGGAGGTCATTCTGGTCATTGTACCAATCGCCGATTCCTTGGCCGCCGGCGGGGTCTCTCGGTGGACCGGAGAGCCCTTGAAGATGTTGGGAGACGGTTGA

Coding sequence (CDS)

ATGTTCTTCATTGCTCCTCTCTCTTTCTTGGATCCTGCGACCTTCGATCTCACCACCATCTCCTTCATCGCCCTTATCCTCCTCCTCTCTCTCCTCTCCCTCACCTTCATCTTCCACCTCCATCTCAAGTCCCGCACCTCCCACCATCTCCAGCGTTTCAATTCTCTCTGGACCGTCCGTTTCCTCCTCGTCGCCTTCATTGCATCATGGGCCCTCAACGAGCTCCTCCGCCTCTCCTTCTTCCGCCGCCGCTATCTCTACCCCTTCCTCCCCTCCCTAACCTCCCTCCACCAATCCACCCTCTGCCAACTCCATGCTCTCTTCTCCCTCGGCCTTTTCCAGCCCTGTTTTCTCATTACCCTTCTCTACCTCATCAATGCGTCCGCCAAGAACAGGACCCCTCACGACTACGGAGCTATTGCCTTCCTTCTCCTCGTCTCCATGCCCATTTTCTTCCTCCACCTTTTCATCGTCTTTTACACCCCCTTCAAGGACGAACTGCCCCCCGCCTTCAATCAGAGCTATCTCATTATACAGGACGGTTTTGACAATGCGACCGTCTTGTGCGCCTACCCACTCTTGAGTTCCATTGCCTTCTCTGGCTTCGGGATCGGCTACATGCTCTGTTTCTTGTTCTCTTGCTGGAAAGTCGCCTCCATGGTCATCAACAAGTCGCTCAGGATTCGAGTTTACGCCTTCGCTTTCACCATCATCATTTCCTTGCCCTTGCAGATTATATTTCTTGGCCTCTCGGGCCTCTGGAGGCCAGACGAGCCGGCTTACTCGGTGGTTGCGTTGGTTGTGTTTTTTTGTACGTTTCTATGCGCCGCCGCGGGGGAGGTCATTCTGGTCATTGTACCAATCGCCGATTCCTTGGCCGCCGGCGGGGTCTCTCGGTGGACCGGAGAGCCCTTGAAGATGTTGGGAGACGGTTGA

Protein sequence

MFFIAPLSFLDPATFDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTVRFLLVAFIASWALNELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLITLLYLINASAKNRTPHDYGAIAFLLLVSMPIFFLHLFIVFYTPFKDELPPAFNQSYLIIQDGFDNATVLCAYPLLSSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRVYAFAFTIIISLPLQIIFLGLSGLWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIADSLAAGGVSRWTGEPLKMLGDG

Homology

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BLAST of CmaCh16G000230 vs. TrEMBL
Match: A0A0A0KXN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089790 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.7e-111
Identity = 228/322 (70.81%), Postives = 257/322 (79.81%), Query Frame = 1


Query: 1   MFFIAP-LSFLDPATFDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTV 60
           MFF+A  LSF+DPATFDLTT+SFIALILLLSLLSL+FIFHL LKSRTSHHLQRFNSLWTV
Sbjct: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV 60

Query: 61  RFLLVAFIASWALNELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLI 120
           RFLLV+FI+ WALNELLRLSFF        LPSL SLHQSTLCQ+H+L SLGLFQPCFLI
Sbjct: 61  RFLLVSFISFWALNELLRLSFF--------LPSLPSLHQSTLCQIHSLLSLGLFQPCFLI 120

Query: 121 TLLYLINASAKNRT---------PHDYGAIAFLLLVSMPIFFLHLFIVFYTPFKDELPPA 180
            LL+LINAS  N            H +  I FLLL+S  IF LHL IVFY+PF  +LPP+
Sbjct: 121 ILLFLINASPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPS 180

Query: 181 FNQSYLIIQDGFDNATVLCAYPLLSSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRV 240
           FNQSYL+I+   +N  V C+YPLLSSIAF+ F +GYMLCF FS WKVASMVINKSLRIR+
Sbjct: 181 FNQSYLLIKHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRL 240

Query: 241 YAFAFTIIISLPLQIIFLGLSGLWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIAD 300
           YA AFT++ISLPLQIIFLGLS LWRPD+P YS+++L+VF   FLCA AGE ILVIVPIAD
Sbjct: 241 YALAFTVMISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIAD 300

Query: 301 SLAAGGVS-RWTGEPLKMLGDG 312
           SLAAG  S   +G PLK  GDG
Sbjct: 301 SLAAGDSSFEDSGHPLKTAGDG 314

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BLAST of CmaCh16G000230 vs. TrEMBL
Match: V7AW84_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G049800g PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.1e-77
Identity = 150/284 (52.82%), Postives = 207/284 (72.89%), Query Frame = 1


Query: 13  ATFDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTVRFLLVAFIASWAL 72
           + FDL T++FI+ +++LS+LS++FIFHL  KS++  HLQ FNSLWTVRFLLV FI  W++
Sbjct: 12  SVFDLVTVTFISGLIILSVLSISFIFHLRFKSKSITHLQNFNSLWTVRFLLVLFIFLWSI 71

Query: 73  NELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLITLLYLINASAKNR 132
            ELLRL FFRR+YLYPFLPS T   Q++LC++H + SLG F+P FL+TLL+L+NAS K +
Sbjct: 72  TELLRLPFFRRKYLYPFLPSFTISQQASLCKVHVVLSLGFFEPAFLVTLLFLLNASIKKK 131

Query: 133 TPHDYGAIAFLLLVSMPIFFLHLFIVFYTPFKDELPPAFNQSYLIIQDGFDNATVLCAYP 192
           TP+D  AI F+LL  +PI  L   ++F++P ++ +P    ++ +I  DG+   TVLCAYP
Sbjct: 132 TPNDAWAITFVLLTCLPIAILQALLIFFSPLENRVPV---ETSVIFNDGYGFQTVLCAYP 191

Query: 193 LLSSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRVYAFAFTIIISLPLQIIFLGLSG 252
            LSS+ F+ FG+ Y    LFSCW+V S+VINK LR+R+Y  A  ++++LP+QI+ LG S 
Sbjct: 192 FLSSVVFAAFGVTYCTWLLFSCWRVLSLVINKGLRVRIYVLASIMLVALPMQIVSLGFSV 251

Query: 253 LWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIADSLAAGG 297
           LW P +  Y V++LV F   F CA  GE ILVI PI+D+L AGG
Sbjct: 252 LWSPHQEVYGVISLVGFLGAFCCATTGEGILVIKPISDALDAGG 292

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BLAST of CmaCh16G000230 vs. TrEMBL
Match: M5X3G9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020457mg PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.4e-76
Identity = 157/299 (52.51%), Postives = 206/299 (68.90%), Query Frame = 1


Query: 1   MFFIAPLSFLDPATFDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTVR 60
           MFFI  + FLD A  DL T+ FI+ +++LSLLSL FIFHL  KSRT+ HLQ FNSLWTVR
Sbjct: 1   MFFIPRIPFLDSA-LDLATLLFISALIILSLLSLCFIFHLCFKSRTALHLQHFNSLWTVR 60

Query: 61  FLLVAFIASWALNELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLIT 120
           FLLV F+  W+LNELLR+   RR YLYPF  +L    +   C++H   SLG F+P FL+T
Sbjct: 61  FLLVLFVIFWSLNELLRIPTLRRTYLYPFFSTLAPFEEPHFCKIHVALSLGFFEPAFLVT 120

Query: 121 LLYLINASAKNRTPHDYGAIAFLLLVSMPIFFLHLFIVFYTPFKD---ELPPAFNQSYLI 180
           LL+L++ S + +TP+ + AIAF+L   +P+  + +  +F+ PF+     +P  F +SY++
Sbjct: 121 LLFLVDVSIEKKTPNAFWAIAFVLATCLPMALVQVIFLFFNPFQKLRLPVPDFFVRSYVV 180

Query: 181 IQDGFDNATVLCAYPLLSSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRVYAFAFTI 240
            +     + V CAYPLL++I F  FG  Y L FLFSCWKV S+VINK LR R+Y  A T+
Sbjct: 181 SKSELGISMVSCAYPLLNTIMFGSFGAAYSLWFLFSCWKVLSLVINKGLRTRIYTLAATV 240

Query: 241 IISLPLQIIFLGLSGLWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIADSLAAGG 297
           ++ LPLQIIF+GLS  W+PD PA++ V+ V F  T  CAA GE ILVI PI DSLAAGG
Sbjct: 241 LVPLPLQIIFMGLSNFWKPDHPAFAAVSFVAFLATLTCAAVGEGILVIKPIGDSLAAGG 298

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BLAST of CmaCh16G000230 vs. TrEMBL
Match: G7J878_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_3g092200 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 8.8e-76
Identity = 151/296 (51.01%), Postives = 209/296 (70.61%), Query Frame = 1


Query: 1   MFFIAPLSFLDPATFDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTVR 60
           M F+  LS +  + FDLTT++ I+ +++LS+LSL FIFHL LKS++  +LQ FNSLWTVR
Sbjct: 1   MLFMNTLSPILTSAFDLTTVTLISSLIVLSVLSLCFIFHLRLKSKSLTYLQGFNSLWTVR 60

Query: 61  FLLVAFIASWALNELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLIT 120
           FLLV FI  W + EL RL FFRR+YLYP  PSL    Q+ LC++H +FSLG F+P FL+T
Sbjct: 61  FLLVLFIFFWCIIELFRLPFFRRKYLYPLSPSLDITQQANLCKIHIVFSLGFFEPAFLLT 120

Query: 121 LLYLINASAKNRTPHDYGAIAFLLLVSMPIFFLHLFIVFYTPFKDELPPAFNQSYLIIQD 180
           LL+L+NAS + +TP+D  A+ F+    +P+  L   +V++ P +  +P    Q+++I++D
Sbjct: 121 LLFLLNASIRKKTPNDGWAVTFVFSTCLPLGILQGLLVYFNPLEHRVPALLRQTFVILED 180

Query: 181 GFDNATVLCAYPLLSSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRVYAFAFTIIIS 240
                TVLCAYP L+S+ F+ F   Y    LFSCWKV S+VINK LRIR+YA    ++++
Sbjct: 181 D----TVLCAYPFLNSVVFAAFSAAYCAWLLFSCWKVLSLVINKGLRIRIYALGSVVLVA 240

Query: 241 LPLQIIFLGLSGLWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIADSLAAGG 297
           LPLQ++ L  + LW P++  Y VV+LVVFFC F CA AGE ILVI P++D+LAAGG
Sbjct: 241 LPLQVVSLAFTVLWSPEDDIYGVVSLVVFFCAFFCAVAGEGILVIKPVSDALAAGG 292

[Close]

BLAST of CmaCh16G000230 vs. TrEMBL
Match: A0A0S3RDY2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G164600 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.7e-75
Identity = 149/282 (52.84%), Postives = 206/282 (73.05%), Query Frame = 1


Query: 15  FDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTVRFLLVAFIASWALNE 74
           FDL T++FI+ +++LS+LS++FIFHL LKS++  HLQ FNSLWTVRFLLV FI  W++ E
Sbjct: 14  FDLVTVTFISGLIILSVLSISFIFHLRLKSKSLTHLQNFNSLWTVRFLLVLFIFLWSITE 73

Query: 75  LLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLITLLYLINASAKNRTP 134
           LLRL FFRR+Y+Y FLP+ T   Q+ LC++H + SLG F+P FL+TLL+L+NAS K +TP
Sbjct: 74  LLRLPFFRRKYIYTFLPTFTISQQANLCKVHIVLSLGFFEPAFLVTLLFLLNASIKKKTP 133

Query: 135 HDYGAIAFLLLVSMPIFFLHLFIVFYTPFKDELPPAFNQSYLIIQDGFDNATVLCAYPLL 194
           +D  AI F+LL+ +PI  L   ++ ++P ++ +P    ++ +I  DG+   TVLC +P L
Sbjct: 134 NDAWAITFVLLICLPIATLQALLISFSPLENRVPV---ETSVIFNDGYGFDTVLCTHPFL 193

Query: 195 SSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRVYAFAFTIIISLPLQIIFLGLSGLW 254
           +S+AF+ FGI Y   FLFSCW+V S+VINK LR+R+Y  A  I++++PLQII LG S LW
Sbjct: 194 TSVAFAVFGITYCTWFLFSCWRVLSLVINKGLRVRIYVLASIILVAVPLQIISLGFSVLW 253

Query: 255 RPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIADSLAAGG 297
            P +  Y +V+LV F   F CA  GE ILVI PI+D+L AGG
Sbjct: 254 SPHQEVYGIVSLVAFLSAFCCATIGEGILVIKPISDALDAGG 292

[Close]

BLAST of CmaCh16G000230 vs. TAIR10
Match: AT1G57680.1 (AT1G57680.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 108.6 bits (270), Expect = 7.0e-24
Identity = 92/309 (29.77%), Postives = 150/309 (48.54%), Query Frame = 1


Query: 6   PLSFLDPATFDLTTISFIALILLLSLLSL--TFIFHLHLKSRTSHHLQRFNSLWTVRFLL 65
           PL+ L P  F + TI  +AL++LL LL +  +F F  H++ +    L  F+  W +R   
Sbjct: 2   PLTKLVPDAFGVVTICLVALLVLLGLLCIAYSFYFQSHVRKQGYIQLGYFSGPWIIRITF 61

Query: 66  VAFIASWALNELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLITLLY 125
           + F   WA+ E+ RLS  RR      L  L    Q  +C+ + + +LG  +PC  +TL++
Sbjct: 62  ILFAIWWAVGEIFRLSLLRRH--RRLLSGLDLRWQENVCKWYIVSNLGFAEPCLFLTLMF 121

Query: 126 LINASAKNRTPHDYG-----AIAFLLLVSMPIFFLHLFIVFYTPFKD-------ELPPAF 185
           L+ A  K  +    G        +++L  +P+  L L +V      +       +LP  F
Sbjct: 122 LLRAPLKMESGALSGKWNRDTAGYIILYCLPMLALQLAVVLSESRLNGGSGSYVKLPHDF 181

Query: 186 NQSYLIIQDGFDNATVLCAYPLLSSIAFSGFGIGYMLCFLFSCW---KVASMVINKSLRI 245
            ++Y  +    D    LC YPLLS+I    F    +  +LF  W   ++  +VINK L+ 
Sbjct: 182 TRTYSRVIIDHDE-VALCTYPLLSTILLGVFA-AVLTAYLF--WLGRQILKLVINKRLQK 241

Query: 246 RVYAFAFTIIISLPLQIIFLGLSGLWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPI 298
           RVY   F++   LPL+I+ L LS L   D+  +  ++ + F   F        +LV  P+
Sbjct: 242 RVYTLIFSVSSFLPLRIVMLCLSVLTAADKIIFEALSFLAFLSLFCFCVVSICLLVYFPV 301

[Close]

BLAST of CmaCh16G000230 vs. NCBI nr
Match: gi|700198451|gb|KGN53609.1| (hypothetical protein Csa_4G089790 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 2.4e-111
Identity = 228/322 (70.81%), Postives = 257/322 (79.81%), Query Frame = 1


Query: 1   MFFIAP-LSFLDPATFDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTV 60
           MFF+A  LSF+DPATFDLTT+SFIALILLLSLLSL+FIFHL LKSRTSHHLQRFNSLWTV
Sbjct: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTV 60

Query: 61  RFLLVAFIASWALNELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLI 120
           RFLLV+FI+ WALNELLRLSFF        LPSL SLHQSTLCQ+H+L SLGLFQPCFLI
Sbjct: 61  RFLLVSFISFWALNELLRLSFF--------LPSLPSLHQSTLCQIHSLLSLGLFQPCFLI 120

Query: 121 TLLYLINASAKNRT---------PHDYGAIAFLLLVSMPIFFLHLFIVFYTPFKDELPPA 180
            LL+LINAS  N            H +  I FLLL+S  IF LHL IVFY+PF  +LPP+
Sbjct: 121 ILLFLINASPNNNNNNDNTTTSHQHHHPPIPFLLLLSFSIFLLHLLIVFYSPFNHKLPPS 180

Query: 181 FNQSYLIIQDGFDNATVLCAYPLLSSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRV 240
           FNQSYL+I+   +N  V C+YPLLSSIAF+ F +GYMLCF FS WKVASMVINKSLRIR+
Sbjct: 181 FNQSYLLIKHDSNNTPVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRL 240

Query: 241 YAFAFTIIISLPLQIIFLGLSGLWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIAD 300
           YA AFT++ISLPLQIIFLGLS LWRPD+P YS+++L+VF   FLCA AGE ILVIVPIAD
Sbjct: 241 YALAFTVMISLPLQIIFLGLSALWRPDQPTYSLLSLLVFLSAFLCATAGEGILVIVPIAD 300

Query: 301 SLAAGGVS-RWTGEPLKMLGDG 312
           SLAAG  S   +G PLK  GDG
Sbjct: 301 SLAAGDSSFEDSGHPLKTAGDG 314

[Close]

BLAST of CmaCh16G000230 vs. NCBI nr
Match: gi|659101582|ref|XP_008451684.1| (PREDICTED: uncharacterized protein LOC103492910 [Cucumis melo])

HSP 1 Score: 400.6 bits (1028), Expect = 2.5e-108
Identity = 225/321 (70.09%), Postives = 254/321 (79.13%), Query Frame = 1


Query: 1   MFFIAP-LSFLDPATFDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTV 60
           MFF+A  LSF+DPATFDLTT+SFIALILLLSLLS++FIFHLHLKSRTSHHLQRFNSLWTV
Sbjct: 1   MFFVAATLSFVDPATFDLTTLSFIALILLLSLLSISFIFHLHLKSRTSHHLQRFNSLWTV 60

Query: 61  RFLLVAFIASWALNELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLI 120
           RFLLV+FI+ WALNE LRLSFF        LPS  SLHQSTLCQ+HAL SLGLFQPCFLI
Sbjct: 61  RFLLVSFISFWALNEFLRLSFF--------LPSHHSLHQSTLCQIHALLSLGLFQPCFLI 120

Query: 121 TLLYLINASAKNR-------TPHDYGA-IAFLLLVSMPIFFLHLFIVFYTPFKDELPPAF 180
            LL+LINAS  N        T H Y   I  LLL+S+ IF LHL IVFY+PF  +LPP+F
Sbjct: 121 ILLFLINASPNNNNNNNNNTTSHQYHPPIPLLLLLSISIFLLHLLIVFYSPFNHKLPPSF 180

Query: 181 NQSYLIIQDGFDNATVLCAYPLLSSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRVY 240
           NQSYL+I+   +N  V C+YPLLSSIAF+ F +GYMLCF FS WKVASMVINKSLRIR++
Sbjct: 181 NQSYLLIKHDSNNTIVFCSYPLLSSIAFAAFALGYMLCFFFSTWKVASMVINKSLRIRLH 240

Query: 241 AFAFTIIISLPLQIIFLGLSGLWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIADS 300
           A AFT++ISL LQIIFLGLS LWRPD P YS+++L+VF   FLCA AGE ILVIVPIADS
Sbjct: 241 ALAFTVMISLALQIIFLGLSALWRPDHPTYSLLSLLVFLSAFLCATAGEGILVIVPIADS 300

Query: 301 LAAG-GVSRWTGEPLKMLGDG 312
           LAAG      +G PLK  GDG
Sbjct: 301 LAAGDSCFEDSGHPLKTAGDG 313

[Close]

BLAST of CmaCh16G000230 vs. NCBI nr
Match: gi|593268630|ref|XP_007136492.1| (hypothetical protein PHAVU_009G049800g [Phaseolus vulgaris])

HSP 1 Score: 295.8 bits (756), Expect = 8.7e-77
Identity = 150/284 (52.82%), Postives = 207/284 (72.89%), Query Frame = 1


Query: 13  ATFDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTVRFLLVAFIASWAL 72
           + FDL T++FI+ +++LS+LS++FIFHL  KS++  HLQ FNSLWTVRFLLV FI  W++
Sbjct: 12  SVFDLVTVTFISGLIILSVLSISFIFHLRFKSKSITHLQNFNSLWTVRFLLVLFIFLWSI 71

Query: 73  NELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLITLLYLINASAKNR 132
            ELLRL FFRR+YLYPFLPS T   Q++LC++H + SLG F+P FL+TLL+L+NAS K +
Sbjct: 72  TELLRLPFFRRKYLYPFLPSFTISQQASLCKVHVVLSLGFFEPAFLVTLLFLLNASIKKK 131

Query: 133 TPHDYGAIAFLLLVSMPIFFLHLFIVFYTPFKDELPPAFNQSYLIIQDGFDNATVLCAYP 192
           TP+D  AI F+LL  +PI  L   ++F++P ++ +P    ++ +I  DG+   TVLCAYP
Sbjct: 132 TPNDAWAITFVLLTCLPIAILQALLIFFSPLENRVPV---ETSVIFNDGYGFQTVLCAYP 191

Query: 193 LLSSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRVYAFAFTIIISLPLQIIFLGLSG 252
            LSS+ F+ FG+ Y    LFSCW+V S+VINK LR+R+Y  A  ++++LP+QI+ LG S 
Sbjct: 192 FLSSVVFAAFGVTYCTWLLFSCWRVLSLVINKGLRVRIYVLASIMLVALPMQIVSLGFSV 251

Query: 253 LWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIADSLAAGG 297
           LW P +  Y V++LV F   F CA  GE ILVI PI+D+L AGG
Sbjct: 252 LWSPHQEVYGVISLVGFLGAFCCATTGEGILVIKPISDALDAGG 292

[Close]

BLAST of CmaCh16G000230 vs. NCBI nr
Match: gi|596029231|ref|XP_007219403.1| (hypothetical protein PRUPE_ppa020457mg, partial [Prunus persica])

HSP 1 Score: 294.7 bits (753), Expect = 1.9e-76
Identity = 157/299 (52.51%), Postives = 206/299 (68.90%), Query Frame = 1


Query: 1   MFFIAPLSFLDPATFDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTVR 60
           MFFI  + FLD A  DL T+ FI+ +++LSLLSL FIFHL  KSRT+ HLQ FNSLWTVR
Sbjct: 1   MFFIPRIPFLDSA-LDLATLLFISALIILSLLSLCFIFHLCFKSRTALHLQHFNSLWTVR 60

Query: 61  FLLVAFIASWALNELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLIT 120
           FLLV F+  W+LNELLR+   RR YLYPF  +L    +   C++H   SLG F+P FL+T
Sbjct: 61  FLLVLFVIFWSLNELLRIPTLRRTYLYPFFSTLAPFEEPHFCKIHVALSLGFFEPAFLVT 120

Query: 121 LLYLINASAKNRTPHDYGAIAFLLLVSMPIFFLHLFIVFYTPFKD---ELPPAFNQSYLI 180
           LL+L++ S + +TP+ + AIAF+L   +P+  + +  +F+ PF+     +P  F +SY++
Sbjct: 121 LLFLVDVSIEKKTPNAFWAIAFVLATCLPMALVQVIFLFFNPFQKLRLPVPDFFVRSYVV 180

Query: 181 IQDGFDNATVLCAYPLLSSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRVYAFAFTI 240
            +     + V CAYPLL++I F  FG  Y L FLFSCWKV S+VINK LR R+Y  A T+
Sbjct: 181 SKSELGISMVSCAYPLLNTIMFGSFGAAYSLWFLFSCWKVLSLVINKGLRTRIYTLAATV 240

Query: 241 IISLPLQIIFLGLSGLWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIADSLAAGG 297
           ++ LPLQIIF+GLS  W+PD PA++ V+ V F  T  CAA GE ILVI PI DSLAAGG
Sbjct: 241 LVPLPLQIIFMGLSNFWKPDHPAFAAVSFVAFLATLTCAAVGEGILVIKPIGDSLAAGG 298

[Close]

BLAST of CmaCh16G000230 vs. NCBI nr
Match: gi|502137338|ref|XP_004503051.1| (PREDICTED: uncharacterized protein LOC101497098 [Cicer arietinum])

HSP 1 Score: 293.5 bits (750), Expect = 4.3e-76
Identity = 154/302 (50.99%), Postives = 212/302 (70.20%), Query Frame = 1


Query: 1   MFFIAPLSFLDPATFDLTTISFIALILLLSLLSLTFIFHLHLKSRTSHHLQRFNSLWTVR 60
           M F+    FL+ A FDLTT++FI+ +++LS+LSL FIFHL  KS+   +LQ FNSLWTVR
Sbjct: 1   MLFMTVSPFLNSA-FDLTTVTFISSLIILSVLSLCFIFHLRFKSKALPYLQGFNSLWTVR 60

Query: 61  FLLVAFIASWALNELLRLSFFRRRYLYPFLPSLTSLHQSTLCQLHALFSLGLFQPCFLIT 120
           FLLV FI  W++ ELLRL FFRR+YLYPF PSL    Q+ LC++H + SLG F+P FL+T
Sbjct: 61  FLLVLFIFLWSIVELLRLPFFRRKYLYPFFPSLDIYQQANLCKIHVVLSLGFFEPAFLVT 120

Query: 121 LLYLINASAKNRTPHDYGAIAFLLLVSMPIFFLHLFIVFYTPFKDELPPAFNQSYLIIQD 180
           LL+L+NAS + +TP+D  AI F+ L  +P+  LH  IV++ P ++ +P    Q+ ++++D
Sbjct: 121 LLFLLNASIRKKTPNDGWAITFVFLTCLPLVVLHGLIVYFNPLENRIPGLLRQTSVVLED 180

Query: 181 GFDNATVLCAYPLLSSIAFSGFGIGYMLCFLFSCWKVASMVINKSLRIRVYAFAFTIIIS 240
                TVLCAYP L+S+ F+ FG  Y   FLFSCW+V S+VINK LR+R+Y     ++++
Sbjct: 181 D----TVLCAYPFLNSVVFAAFGAAYCAWFLFSCWRVLSLVINKGLRLRIYGLGSVVLVA 240

Query: 241 LPLQIIFLGLSGLWRPDEPAYSVVALVVFFCTFLCAAAGEVILVIVPIADSLAAGG-VSR 300
           LPLQ++ L  + LW P++  Y VV+L+VF   F CA  GE ILVI PI+D+L AGG   R
Sbjct: 241 LPLQVVSLAFTVLWNPEDDFYGVVSLLVFLGAFCCAVTGEGILVIKPISDALDAGGSCCR 297

Query: 301 WT 302
           WT
Sbjct: 301 WT 297

The following BLAST results are available for this feature:

BLAST of CmaCh16G000230 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh16G000230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXN9_CUCSA	1.7e-111	70.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089790 PE=4 SV=1	[more]
V7AW84_PHAVU	6.1e-77	52.82	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G049800g PE=4 SV=1	[more]
M5X3G9_PRUPE	1.4e-76	52.51	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020457mg PE=4 S...	[more]
G7J878_MEDTR	8.8e-76	51.01	Transmembrane protein, putative OS=Medicago truncatula GN=MTR_3g092200 PE=4 SV=1	[more]
A0A0S3RDY2_PHAAN	5.7e-75	52.84	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G164600 PE=...	[more]

BLAST of CmaCh16G000230 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G57680.1	7.0e-24	29.77	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of CmaCh16G000230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700198451\|gb\|KGN53609.1\|	2.4e-111	70.81	hypothetical protein Csa_4G089790 [Cucumis sativus]	[more]
gi\|659101582\|ref\|XP_008451684.1\|	2.5e-108	70.09	PREDICTED: uncharacterized protein LOC103492910 [Cucumis melo]	[more]
gi\|593268630\|ref\|XP_007136492.1\|	8.7e-77	52.82	hypothetical protein PHAVU_009G049800g [Phaseolus vulgaris]	[more]
gi\|596029231\|ref\|XP_007219403.1\|	1.9e-76	52.51	hypothetical protein PRUPE_ppa020457mg, partial [Prunus persica]	[more]
gi\|502137338\|ref\|XP_004503051.1\|	4.3e-76	50.99	PREDICTED: uncharacterized protein LOC101497098 [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019685	DUF2534

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G000230.1	CmaCh16G000230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019685	Protein of unknown function DUF2534	PFAM	PF10749	DUF2534	coord: 194..249 score: 9.
None	No IPR available	PANTHER	PTHR34116	FAMILY NOT NAMED	coord: 1..296 score: 6.9E
None	No IPR available	PANTHER	PTHR34116:SF1	SUBFAMILY NOT NAMED	coord: 1..296 score: 6.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G000230	Cucsa.273350	Cucumber (Gy14) v1	cgycmaB0760
CmaCh16G000230	Csa4G089790	Cucumber (Chinese Long) v2	cmacuB339
CmaCh16G000230	CSPI04G08270	Wild cucumber (PI 183967)	cmacpiB344
CmaCh16G000230	Lsi07G003130	Bottle gourd (USVL1VR-Ls)	cmalsiB330
CmaCh16G000230	Cp4.1LG14g07020	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G000230	CsaV3_4G008490	Cucumber (Chinese Long) v3	cmacucB0395
CmaCh16G000230	CsGy4G008150	Cucumber (Gy14) v2	cgybcmaB501

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G000230	Silver-seed gourd	carcmaB0752
CmaCh16G000230	Silver-seed gourd	carcmaB1366
CmaCh16G000230	Cucumber (Chinese Long) v3	cmacucB0402
CmaCh16G000230	Cucurbita maxima (Rimu)	cmacmaB338
CmaCh16G000230	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G000230	Cucurbita moschata (Rifu)	cmacmoB327
CmaCh16G000230	Cucurbita pepo (Zucchini)	cmacpeB339