Cucsa.257280 (gene) Cucumber (Gy14) v1

NameCucsa.257280
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPentatricopeptide repeat-containing protein, putative
Locationscaffold02229 : 4633326 .. 4636283 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTGTTCTCCCCAGAAACCCCTCGGCGGAGCGAAGACGACGATGCTTCTCCAAACTTCTGTTCACCACCGTACCGTCTCTCTCCCCTCACCAATTTCTTATTCTCGTAAATTTCTGCCTCTAATCCAATCTCAGCCCTTTTTCCATAATGTGAATTATCGGCGGCTTCCTCTTTCTGTAACTTGCTCTATCTCCCAAGTCCATAGCTATGGAACTGTGGACTTCGAGCGGAGGCCTATGTTTAAATGGAACGCTATTTATAGAAGGATATCGCTGATGGAGAATCCCGAGTTGGGCTCTGCGAGTGTGCTGAACCAGTGGGAGAATGAGGGCAAGAACATTACGAAATGGGAGCTTTCTCGGGTCGTTAAGGAGTTAAGAAAGTACAAGCGGTTTGAGAGGGCTTTGGAGGTAACAAAGATGATAAATGTTTGGGTGTTTATATTGGTGTTTATGAATTGTGGTATTGATTTCTTCAGTCTTTAGTTGAGTTAATGAAAAAAATGATGTCGATTTTTATGTAGGATTAACTGATGTTCAGCTAAATCGATGAGGTTATAGGTTTGACTTCGAAATGGTTAAAATCACTTTTTTTTTCTTACATTTAAAATCAAATTCGATGGAATGATAACCGCTTTTAGAAGTGTATAATAAACTATCGAATTAACTTTGAATGATTATAGGCATATTTGTTACTGATTTTGAATGTGAAAAAGCAATTCTAACTGTTTAAAAATCACTCTCAAACATGTCTTTAAATAGATATTGTGGCAAGTATGAAAATCATTCTTGGTTGAATCTGTTTTTCACTTCGTAATTTGGATTGGCTTGTAAAGCTAAAGTTTCTTCTTCTTCATCACAAGAAATTTCAACTTTGTGTGGGCAAACACAAACTGTGCCAATGCTTTAGCGTTTTTTTATTCTGAGAAAATGATGCATTTCATTGAAGAATGTTATATACCATCTTTTGAACTTTTCCTTCTTTTTGGGTCTCCTATATTCCTAATACCTTGTGATTGAGGAATTATAGGTCATCATCATTGAGCTGATCTCAATGCCTAATTTATTCTTACACATATTTGTAATGTATCTTCTTATATACATGTGTGTATGTGTGTATGATGTGGTTTTGATCATCTGATCTGGTTATATGATACTTTTCTAAACATCGAAGGGATCACGTGTAAAAATACTGAATTTGGCAATTTGTTGCATGTGTTACATAGATGATATATATGTATAGATTGTTAAAGCTGTTTCAATTCTAAAATTTCATTTTTTTTCTGAAGATATATGATTGGATGAGCAATAGGGAAGAGAGGTTTAGATTAACAACGAGTGATGCTGCCATTCAATTGGATCTTATATCGAAAGTCCGTGGCATTAAAAGTGCTGAAGAATACTTCCTCAGGCTGCCGAATCATTTGAAAGACAGGAGGATATATGGGGCTCTTCTGAACGCGTATGCAAAAGGAAGACAGAGAGAAAAAGCAGAAAATTTACTTGAAAAAATGAGAACCAAAGGCTTCACGACTCACCCGCTTCCGTTCAATGTAATGATGACTCTCTACATGAACGTTAAAGAGTATGAGAAAGTTGAGTCGTTAGTGTCAGAAATGACAGAAAATAGCATTCAGCTTGACATATATTCCTACAACATATGGCTATCATCTTGTGGGTTACAAGGATCTACTGAGAAGATGGAAGAAGTATACGAACAGATGAAACAAGACAGGACCATCAATGCCAATTGGACTACATTCAGCACAATGGCAACAATGTACATTAAGATGGGACTGATGGAAAAAGCTGAAGAATGCTTGAGAAGGGTTGAAAGTAGGATTGTAGGCCGTGATCGAATACCGTATCATTATCTGATAAGTCTGTATGGTAGTGTTGGTAATAAAGAAGAAATGTATCGGGTGTGGAACATTTACAAGAACGTTTTCCCCACAATTCCAAATCTGGGATACCATGCAATAATTTCTGCTCTAATCAGGGTTGGTGATGTTGAAGGTGCTGAAAAAATTTACGAGGAATGGCTAACTGTTAAATCAACCTACGACCCACGAATCGCTAATCTTTTCATAGGATGGTATGTTAAGGAAGGCAACACGAGCAAAGCTGAAAGCTTCTTCGATCACATGGTTGAAGTTGGGGGAAAGCCAAATTCAAGTACATGGGAGATTCTTGTTGACAGACATACTAAAGAGGGTCGGGTTTCTGATGCTTTAGCTAGTTGGAAAGAAGCCTTTTCTGCCGAGGGTTCTAAGAGTTGGAGGCCAAAGCCCTATAATGTGTTGGCTTACTTCGACCTCTGTGAGAAAGAAGGAGACATCGCCAGCAAGGAGGTTCTAGTTGGATTACTGAGGCAGCCCAAATATCTTCAAGACAAAACATATGCATCACTCATTGGTTTGTTAGATGAGACAATCGATAACAATGAAGTCTCAGAGAAAGGTAGTAATATAAACGATGAAATCGATAAAACCGAGTACGAGTCTGATGATTCTGAGATGTTTCTCAAGCTGTGACAGAATCAATGATATTGTCATCTATGGTTTCTCAGATTCGTAATTAGAATTTTGGCAAAGAATGCTCGTCAGTGGTTGTTCACTCTTCAATAGTAAAGGGTGAAAACAATTTGGAATCTTTCTTTGGGGTTTAGGAGTTGGGTAATAAAGTAGAAAGTTATACTCAACAGAGGTATGTTTATTTATTTACACTTTCAGCTCTCTCTGTCTCTTCTCCATCATTAGATCTTTCCATGAATTTTGAATGTAATTTCCGTAGGTAGAAGAAGTCTGGGATATATACTAAATAGGGTAGAAATTTTGTTGCAATTCCAATTTCCTAATGTTAGTTGTTCTAAAAGAATTCAACAAAATTTCAATTTTTAATTTGTAATCGAGTAATCTATGTAGCTGTGTAGAATGAGAGCATTGAAAGGGGAGGATA

mRNA sequence

TTCTGTTCTCCCCAGAAACCCCTCGGCGGAGCGAAGACGACGATGCTTCTCCAAACTTCTGTTCACCACCGTACCGTCTCTCTCCCCTCACCAATTTCTTATTCTCGTAAATTTCTGCCTCTAATCCAATCTCAGCCCTTTTTCCATAATGTGAATTATCGGCGGCTTCCTCTTTCTGTAACTTGCTCTATCTCCCAAGTCCATAGCTATGGAACTGTGGACTTCGAGCGGAGGCCTATGTTTAAATGGAACGCTATTTATAGAAGGATATCGCTGATGGAGAATCCCGAGTTGGGCTCTGCGAGTGTGCTGAACCAGTGGGAGAATGAGGGCAAGAACATTACGAAATGGGAGCTTTCTCGGGTCGTTAAGGAGTTAAGAAAGTACAAGCGGTTTGAGAGGGCTTTGGAGATATATGATTGGATGAGCAATAGGGAAGAGAGGTTTAGATTAACAACGAGTGATGCTGCCATTCAATTGGATCTTATATCGAAAGTCCGTGGCATTAAAAGTGCTGAAGAATACTTCCTCAGGCTGCCGAATCATTTGAAAGACAGGAGGATATATGGGGCTCTTCTGAACGCGTATGCAAAAGGAAGACAGAGAGAAAAAGCAGAAAATTTACTTGAAAAAATGAGAACCAAAGGCTTCACGACTCACCCGCTTCCGTTCAATGTAATGATGACTCTCTACATGAACGTTAAAGAGTATGAGAAAGTTGAGTCGTTAGTGTCAGAAATGACAGAAAATAGCATTCAGCTTGACATATATTCCTACAACATATGGCTATCATCTTGTGGGTTACAAGGATCTACTGAGAAGATGGAAGAAGTATACGAACAGATGAAACAAGACAGGACCATCAATGCCAATTGGACTACATTCAGCACAATGGCAACAATGTACATTAAGATGGGACTGATGGAAAAAGCTGAAGAATGCTTGAGAAGGGTTGAAAGTAGGATTGTAGGCCGTGATCGAATACCGTATCATTATCTGATAAGTCTGTATGGTAGTGTTGGTAATAAAGAAGAAATGTATCGGGTGTGGAACATTTACAAGAACGTTTTCCCCACAATTCCAAATCTGGGATACCATGCAATAATTTCTGCTCTAATCAGGGTTGGTGATGTTGAAGGTGCTGAAAAAATTTACGAGGAATGGCTAACTGTTAAATCAACCTACGACCCACGAATCGCTAATCTTTTCATAGGATGGTATGTTAAGGAAGGCAACACGAGCAAAGCTGAAAGCTTCTTCGATCACATGGTTGAAGTTGGGGGAAAGCCAAATTCAAGTACATGGGAGATTCTTGTTGACAGACATACTAAAGAGGGTCGGGTTTCTGATGCTTTAGCTAGTTGGAAAGAAGCCTTTTCTGCCGAGGGTTCTAAGAGTTGGAGGCCAAAGCCCTATAATGTGTTGGCTTACTTCGACCTCTGTGAGAAAGAAGGAGACATCGCCAGCAAGGAGGTTCTAGTTGGATTACTGAGGCAGCCCAAATATCTTCAAGACAAAACATATGCATCACTCATTGGTTTGTTAGATGAGACAATCGATAACAATGAAGTCTCAGAGAAAGGTAGTAATATAAACGATGAAATCGATAAAACCGAGTACGAGTCTGATGATTCTGAGATGTTTCTCAAGCTGTGACAGAATCAATGATATTGTCATCTATGGTTTCTCAGATTCGTAATTAGAATTTTGGCAAAGAATGCTCGTCAGTGGTTGTTCACTCTTCAATAGTAAAGGGTGAAAACAATTTGGAATCTTTCTTTGGGGTTTAGGAGTTGGGTAATAAAGTAGAAAGTTATACTCAACAGAGGTATGTTTATTTATTTACACTTTCAGCTCTCTCTGTCTCTTCTCCATCATTAGATCTTTCCATGAATTTTGAATGTAATTTCCGTAGGTAGAAGAAGTCTGGGATATATACTAAATAGGGTAGAAATTTTGTTGCAATTCCAATTTCCTAATGTTAGTTGTTCTAAAAGAATTCAACAAAATTTCAATTTTTAATTTGTAATCGAGTAATCTATGTAGCTGTGTAGAATGAGAGCATTGAAAGGGGAGGATA

Coding sequence (CDS)

ATGCTTCTCCAAACTTCTGTTCACCACCGTACCGTCTCTCTCCCCTCACCAATTTCTTATTCTCGTAAATTTCTGCCTCTAATCCAATCTCAGCCCTTTTTCCATAATGTGAATTATCGGCGGCTTCCTCTTTCTGTAACTTGCTCTATCTCCCAAGTCCATAGCTATGGAACTGTGGACTTCGAGCGGAGGCCTATGTTTAAATGGAACGCTATTTATAGAAGGATATCGCTGATGGAGAATCCCGAGTTGGGCTCTGCGAGTGTGCTGAACCAGTGGGAGAATGAGGGCAAGAACATTACGAAATGGGAGCTTTCTCGGGTCGTTAAGGAGTTAAGAAAGTACAAGCGGTTTGAGAGGGCTTTGGAGATATATGATTGGATGAGCAATAGGGAAGAGAGGTTTAGATTAACAACGAGTGATGCTGCCATTCAATTGGATCTTATATCGAAAGTCCGTGGCATTAAAAGTGCTGAAGAATACTTCCTCAGGCTGCCGAATCATTTGAAAGACAGGAGGATATATGGGGCTCTTCTGAACGCGTATGCAAAAGGAAGACAGAGAGAAAAAGCAGAAAATTTACTTGAAAAAATGAGAACCAAAGGCTTCACGACTCACCCGCTTCCGTTCAATGTAATGATGACTCTCTACATGAACGTTAAAGAGTATGAGAAAGTTGAGTCGTTAGTGTCAGAAATGACAGAAAATAGCATTCAGCTTGACATATATTCCTACAACATATGGCTATCATCTTGTGGGTTACAAGGATCTACTGAGAAGATGGAAGAAGTATACGAACAGATGAAACAAGACAGGACCATCAATGCCAATTGGACTACATTCAGCACAATGGCAACAATGTACATTAAGATGGGACTGATGGAAAAAGCTGAAGAATGCTTGAGAAGGGTTGAAAGTAGGATTGTAGGCCGTGATCGAATACCGTATCATTATCTGATAAGTCTGTATGGTAGTGTTGGTAATAAAGAAGAAATGTATCGGGTGTGGAACATTTACAAGAACGTTTTCCCCACAATTCCAAATCTGGGATACCATGCAATAATTTCTGCTCTAATCAGGGTTGGTGATGTTGAAGGTGCTGAAAAAATTTACGAGGAATGGCTAACTGTTAAATCAACCTACGACCCACGAATCGCTAATCTTTTCATAGGATGGTATGTTAAGGAAGGCAACACGAGCAAAGCTGAAAGCTTCTTCGATCACATGGTTGAAGTTGGGGGAAAGCCAAATTCAAGTACATGGGAGATTCTTGTTGACAGACATACTAAAGAGGGTCGGGTTTCTGATGCTTTAGCTAGTTGGAAAGAAGCCTTTTCTGCCGAGGGTTCTAAGAGTTGGAGGCCAAAGCCCTATAATGTGTTGGCTTACTTCGACCTCTGTGAGAAAGAAGGAGACATCGCCAGCAAGGAGGTTCTAGTTGGATTACTGAGGCAGCCCAAATATCTTCAAGACAAAACATATGCATCACTCATTGGTTTGTTAGATGAGACAATCGATAACAATGAAGTCTCAGAGAAAGGTAGTAATATAAACGATGAAATCGATAAAACCGAGTACGAGTCTGATGATTCTGAGATGTTTCTCAAGCTGTGA

Protein sequence

MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVDFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL*
BLAST of Cucsa.257280 vs. Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 661.8 bits (1706), Expect = 6.6e-189
Identity = 321/511 (62.82%), Postives = 401/511 (78.47%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60
           MLLQ +V +R V L S  SYSR    L    P        +   ++ CSISQV+ YGTVD
Sbjct: 1   MLLQAAVQNRNVPLASSASYSRL---LRCRSPVVSVAALSKKTAAIVCSISQVYGYGTVD 60

Query: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120
           +ERRP+ +WNAIY++ISLME PELG+ASVLNQWE  G+ +TKWEL RVVKELRKYKR  +
Sbjct: 61  YERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQ 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180
           ALE+YDWM+NR ERFRL+ SDAAIQLDLI KVRGI  AEE+FL+LP + KDRR+YG+LLN
Sbjct: 121 ALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLN 180

Query: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240
           AY + + REKAE LL  MR KG+  HPLPFNVMMTLYMN++EY+KV+++V EM +  I+L
Sbjct: 181 AYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300
           DIYSYNIWLSSCG  GS EKME VY+QMK D +I  NWTTFSTMATMYIKMG  EKAE+ 
Sbjct: 241 DIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360
           LR+VE+RI GR+RIPYHYL+SLYGS+GNK+E+YRVW++YK+V P+IPNLGYHA++S+L+R
Sbjct: 301 LRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVR 360

Query: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420
           +GD+EGAEK+YEEWL VKS+YDPRI NL +  YVK      AE  FDHMVE+GGKP+SST
Sbjct: 361 MGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 420

Query: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480
           WEIL   HT++  +S+AL   + AFSAEGS +WRPK   +  +F LCE+E D+ SKE ++
Sbjct: 421 WEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVL 480

Query: 481 GLLRQPKYLQDKTYASLIGL-LDETIDNNEV 511
            LLRQ   L+DK+Y +LI +  + T++N+E+
Sbjct: 481 ELLRQSGDLEDKSYLALIDVDENRTVNNSEI 508

BLAST of Cucsa.257280 vs. Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.9e-72
Identity = 149/416 (35.82%), Postives = 226/416 (54.33%), Query Frame = 1

Query: 72  IYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSNR 131
           +Y R+      E+     LNQ+    K++ KWE+   +K+LR    +  AL++ + M  R
Sbjct: 25  LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEER 84

Query: 132 EERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKA 191
                 T SD AI LDL++K R I + E YF+ LP   K    YG+LLN Y K    EKA
Sbjct: 85  G--MNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKA 144

Query: 192 ENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSS 251
           E LL KM+    T   + +N +MTLY    E EKV +++ E+   ++  D Y+YN+W+ +
Sbjct: 145 EGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRA 204

Query: 252 CGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIVGR 311
                    +E V E+M +D  +  +WTT+S MA++Y+  GL +KAE+ L+ +E +   R
Sbjct: 205 LAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQR 264

Query: 312 DRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKIY 371
           D   Y +LI+LYG +G   E+YR+W   +   P   N+ Y  +I  L+++ D+ GAE ++
Sbjct: 265 DFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLF 324

Query: 372 EEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHTKE 431
           +EW    STYD RI N+ IG Y +EG   KA    +     GGK N+ TWEI +D + K 
Sbjct: 325 KEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKS 384

Query: 432 GRVSDALASWKEAFS---AEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLR 485
           G ++ AL    +A S    +G K W P P  V A     E++ D+   E L+ +L+
Sbjct: 385 GDMARALECMSKAVSIGKGDGGK-WLPSPETVRALMSYFEQKKDVNGAENLLEILK 437

BLAST of Cucsa.257280 vs. Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-70
Identity = 148/422 (35.07%), Postives = 237/422 (56.16%), Query Frame = 1

Query: 65  PMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEI 124
           P+  ++ + RR++   +P      VL+ W ++G  +   EL  ++K LRK+ RF  AL+I
Sbjct: 33  PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92

Query: 125 YDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAK 184
            DWMS       ++  D AI+LDLI+KV G+  AE++F  +P   ++  +YGALLN YA 
Sbjct: 93  SDWMSEHRVH-EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152

Query: 185 GRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYS 244
            +   KAE + ++M+  GF    LP+NVM+ LY+   +Y  VE L+ EM + +++ DI++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 212

Query: 245 YNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRV 304
            N  L +  +    E ME+   + + D+ ++ +W T++  A  YIK GL EKA E LR+ 
Sbjct: 213 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 272

Query: 305 ESRIVGRDR-IPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGD 364
           E  +  + R   Y  L+S YG+ G KEE+YR+W++YK +     N GY ++ISAL+++ D
Sbjct: 273 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 332

Query: 365 VEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEI 424
           +E  EKI EEW    S +D RI +L I  Y K+G   KAE   + +V+     ++STWE 
Sbjct: 333 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 392

Query: 425 LVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLL 484
           L   +   G++  A+  WK A        WRP    +++  D  E + D+     ++ LL
Sbjct: 393 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 451

Query: 485 RQ 486
            +
Sbjct: 453 SE 451

BLAST of Cucsa.257280 vs. Swiss-Prot
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.5e-68
Identity = 147/425 (34.59%), Postives = 228/425 (53.65%), Query Frame = 1

Query: 74  RRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSNREE 133
           + I     P     S+L +  + G  ++  EL  + K L +  R++ AL++ +WM N+++
Sbjct: 42  KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKD 101

Query: 134 RFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRI----YGALLNAYAKGRQRE 193
               +  D A++LDLI K  G+K  EEYF +L +     R+    Y  LL AY K +  +
Sbjct: 102 -IEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVK 161

Query: 194 KAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWL 253
           +AE L+EK+   GF   P PFN MM LY    +YEKV  +VS M  N I  ++ SYN+W+
Sbjct: 162 EAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWM 221

Query: 254 SSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIV 313
           ++C        +E VY++M  D+++   W++  T+A +YIK G  EKA   L   E  + 
Sbjct: 222 NACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLN 281

Query: 314 GRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEK 373
             +R+ Y +LI+LY S+GNKE + R+W + K+V   I  + Y  ++S+L++ GD+E AE+
Sbjct: 282 RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAER 341

Query: 374 IYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHT 433
           ++ EW      YD R++N+ +G YV+ G   KAES    ++E GG PN  TWEIL++   
Sbjct: 342 VFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWV 401

Query: 434 KEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV------GLL 489
           K   +  A+ +  + F       WRP    V+A  +  EKE  I      V      GL 
Sbjct: 402 KCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLA 461

BLAST of Cucsa.257280 vs. Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-67
Identity = 138/409 (33.74%), Postives = 241/409 (58.92%), Query Frame = 1

Query: 90  LNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSNREERFRLTTSDAAIQLDLI 149
           + +W+ EG ++ K+EL+R+V+ELRK KR++ ALEI +WM  +E+  +L   D A+ LDLI
Sbjct: 81  IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQED-IKLQAGDYAVHLDLI 140

Query: 150 SKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKAENLLEKMRTKGFTTHPLP 209
           SK+RG+ SAE++F  +P+ ++      +LL++Y + +  +KAE L EKM   GF    LP
Sbjct: 141 SKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 200

Query: 210 FNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMK 269
           +N M+++Y++  ++EKV  L+ E+   +   DI +YN+WL++       E  E+VY + K
Sbjct: 201 YNHMLSMYISRGQFEKVPVLIKELKIRTSP-DIVTYNLWLTAFASGNDVEGAEKVYLKAK 260

Query: 270 QDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNK 329
           +++ +N +W T+S +  +Y K   +EKA   L+ +E  +  ++R+ Y  LISL+ ++G+K
Sbjct: 261 EEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDK 320

Query: 330 EEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLF 389
           + +   W   K+ F  + +  Y ++ISA++++G+ E A+ +Y+EW +V  T D RI NL 
Sbjct: 321 DGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLI 380

Query: 390 IGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHTKEGRVSDALASWKEAFSAEG 449
           +  Y+        E F++ +VE G  P+ STWEIL   + K   +   L  + +A   + 
Sbjct: 381 LAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI--DS 440

Query: 450 SKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLRQPKYLQDKTYASLI 499
            K W      V       E++G++   E L+ LL++  Y+  + Y SL+
Sbjct: 441 VKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484

BLAST of Cucsa.257280 vs. TrEMBL
Match: A0A0A0L6I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127020 PE=4 SV=1)

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60
           MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60

Query: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120
           FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER
Sbjct: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180

Query: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240
           AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL
Sbjct: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300
           DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360
           LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420
           VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420

Query: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480
           WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV
Sbjct: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 538
           GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL
Sbjct: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 537

BLAST of Cucsa.257280 vs. TrEMBL
Match: M5XM86_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003822mg PE=4 SV=1)

HSP 1 Score: 759.2 bits (1959), Expect = 3.4e-216
Identity = 368/539 (68.27%), Postives = 452/539 (83.86%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLP--SPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGT 60
           M LQTSVHH   +LP  S +SYS      I + P   ++N++RLP S++CSISQVH+YGT
Sbjct: 1   MPLQTSVHHHHHNLPLSSSLSYSTLLPCKIPTLPLPSSINFQRLP-SISCSISQVHNYGT 60

Query: 61  VDFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRF 120
           VD+ERRPM KWNAIYR+ISL ++PE+ SA VLNQWE EG+ +TKWEL RVVKELRKYKR+
Sbjct: 61  VDYERRPMVKWNAIYRKISLTDDPEVRSADVLNQWEKEGRKLTKWELCRVVKELRKYKRY 120

Query: 121 ERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGAL 180
           +RALE+YDWMSNR ERFR++TSDAAIQLDL++KVRG+ SAE YFL LP+ LKDRRIYGAL
Sbjct: 121 DRALEVYDWMSNRGERFRISTSDAAIQLDLVAKVRGVASAENYFLSLPDTLKDRRIYGAL 180

Query: 181 LNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSI 240
           LNAY + R +EKAE+LL+KMR+KG     LPFNVMMTLYMN+KEY+KV+S++SEM E +I
Sbjct: 181 LNAYVRTRMKEKAESLLDKMRSKGHALQSLPFNVMMTLYMNLKEYDKVDSIISEMMEKNI 240

Query: 241 QLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAE 300
           QLDIYSYNIWLSS G QGS E+ME+V+EQMK DRT+N NWTTFSTMATMYIKMG +EKAE
Sbjct: 241 QLDIYSYNIWLSSRGSQGSEERMEQVFEQMKLDRTVNPNWTTFSTMATMYIKMGQLEKAE 300

Query: 301 ECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISAL 360
            CL++VESRI GRDRIPYHYL+SLYG+VGNKEE+YRVWNIYK+ FP+IPNLGYHAI+S+L
Sbjct: 301 ACLKKVESRITGRDRIPYHYLLSLYGNVGNKEELYRVWNIYKSSFPSIPNLGYHAIMSSL 360

Query: 361 IRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNS 420
           +RVGDVEGAEKIYEEWLTVKSTYDPRIAN+FI +Y+K+G+  KA+SF+DHMV+VGGKPNS
Sbjct: 361 LRVGDVEGAEKIYEEWLTVKSTYDPRIANVFIAYYIKDGDFEKAQSFYDHMVDVGGKPNS 420

Query: 421 STWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEV 480
           +TWE L + H +E R+S+AL+ WKEAFSAEGSKSWRPKP NV A+ +LCE+E +  SKE 
Sbjct: 421 TTWETLAEGHIEEQRISEALSCWKEAFSAEGSKSWRPKPVNVSAFLELCEQEANSVSKEF 480

Query: 481 LVGLLRQPKYLQDKTYASLIGLLDETIDNNEVSEK--GSNINDEIDKTEYESDDSEMFL 536
            +GLL+Q   L++K+YASLIGL DE + ++++S K   +NI  + D  +   D SE+ L
Sbjct: 481 FMGLLKQSGQLKNKSYASLIGLADEDVSDDDLSLKKDRTNITKDDDDEKEAGDGSELLL 538

BLAST of Cucsa.257280 vs. TrEMBL
Match: U5FUI5_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0014s04920g PE=4 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 5.4e-214
Identity = 359/535 (67.10%), Postives = 433/535 (80.93%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60
           MLLQ ++HH  VSL S ISYS               VNY++LP+ + CSISQVH+YGTVD
Sbjct: 1   MLLQPALHHHKVSLSSSISYSHSVPWKSPKSTLHQTVNYKKLPV-IICSISQVHNYGTVD 60

Query: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120
           +ERRPM KWN IYRRISLMENPELGS SVLN+WENEGK +TKWEL RVVKELRKYKR+++
Sbjct: 61  YERRPMIKWNGIYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQ 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180
           ALE+YDWM NR+ERFRL+ SDAAIQLDLI+KVRG+ +AE++FL LPN  KDRR+YGALLN
Sbjct: 121 ALEVYDWMKNRQERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLN 180

Query: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240
           AY + R REKAE L ++MR KG+ TH LPFNV MTLYMN+KEY+KV+ ++SEM E +I+L
Sbjct: 181 AYVQNRMREKAETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300
           DIYSYNIWLSSCG QGS +KME+VYEQMK DR+IN NWTTFSTMATMYIKMG  EKAE+C
Sbjct: 241 DIYSYNIWLSSCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360
           LRRVESRI GRDRIPYHYL+SLYG+VGNKEE+YRVWNIYK++FP+IPNLGYHAIIS+L+R
Sbjct: 301 LRRVESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVR 360

Query: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420
           + D+EGAEKI+EEWL++K++YDPRIANLFI  YV +GN  +A+SFFDHM+E GGKPNS+T
Sbjct: 361 LDDIEGAEKIFEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNSNT 420

Query: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480
           WEIL   H  E R S+AL+  KEAF   GSKSW+P P NV ++F LCE+E D+A+KE L 
Sbjct: 421 WEILAQGHISERRTSEALSCLKEAFVTPGSKSWKPNPANVTSFFKLCEEEADMANKEALE 480

Query: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFL 536
           G LRQ  +L+DK YASL+G+    +  +E+S K     D+ID  E + DD    L
Sbjct: 481 GFLRQSGHLKDKAYASLLGM---PVTGDELSTKEDRTGDQIDNEEDDEDDGAEML 531

BLAST of Cucsa.257280 vs. TrEMBL
Match: B9SKK8_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0658300 PE=4 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 5.4e-214
Identity = 366/531 (68.93%), Postives = 442/531 (83.24%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFF---HNVNYRRLPLSVTCSISQVHSYG 60
           MLLQ S++H+  SL S ISYSR   PL    P +     VNYR+LP  +TCSIS+VHSYG
Sbjct: 2   MLLQPSLNHQQASLSSTISYSR---PLPWKNPHYTLHQTVNYRKLP--ITCSISKVHSYG 61

Query: 61  TVDFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKR 120
           TVD+ERRPM KWN++YRRISLME PELG+A+VLN+ E +GK +TKWEL RVVKELRKYKR
Sbjct: 62  TVDYERRPMIKWNSVYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKR 121

Query: 121 FERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGA 180
            ++ALE+YDWM+NREERFRL+ SDAAIQLDL++KVRG+ SAE+YF+RL +++KDRR+YGA
Sbjct: 122 HKQALEVYDWMNNREERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGA 181

Query: 181 LLNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENS 240
           LLN+Y K R REKAE+L+EKMR K +TTH LPFNVMMTLYMN+KEY+KV+ ++SEM   +
Sbjct: 182 LLNSYVKARMREKAESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKN 241

Query: 241 IQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKA 300
           I+LDIYSYNIWLSS G QGS E+MEEVYEQMK D TIN NWTTFSTMATMYIKMG +EKA
Sbjct: 242 IRLDIYSYNIWLSSRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKA 301

Query: 301 EECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISA 360
           E+CLRRVESRI GRDRIPYHYL+SLYG+VGNKEE+YRVWNIYK++F TIPNLGYHAIIS+
Sbjct: 302 EDCLRRVESRITGRDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISS 361

Query: 361 LIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPN 420
           L+R+ D+EGAEKIYEEWL VKS+YDPRI NL +GWYV+ GN  KAESFFDHM+EVGGKPN
Sbjct: 362 LVRMDDIEGAEKIYEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPN 421

Query: 421 SSTWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKE 480
           SSTWEIL D HT+E R+S+AL+ +KEAF A+GSKSW+PKP  + ++F LCE+E D+AS  
Sbjct: 422 SSTWEILADGHTREKRISEALSCFKEAFLAQGSKSWKPKPVIISSFFKLCEEEADMASTG 481

Query: 481 VLVGLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYES 529
           VL  LL Q  YL+DKTYASLIG    ++ +NE+S +     D  +  E E+
Sbjct: 482 VLEDLLAQSGYLEDKTYASLIG---SSVPSNELSTEKDRTGDRNEVEENET 524

BLAST of Cucsa.257280 vs. TrEMBL
Match: B9GP78_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0002s14020g PE=4 SV=2)

HSP 1 Score: 750.4 bits (1936), Expect = 1.6e-213
Identity = 363/539 (67.35%), Postives = 442/539 (82.00%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFF---HNVNYRRLPLSVTCSISQVHSYG 60
           MLLQ S+HH  VSL S ISYS    PL    P F     VNY++LP+ +TCSISQ+H+YG
Sbjct: 1   MLLQPSLHHHKVSLSSTISYSH---PLPWKNPNFTLHQTVNYKKLPV-ITCSISQIHNYG 60

Query: 61  TVDFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKR 120
           TVD+ERRPM KWNAIYRRISLMENPELGS SVLNQWEN+GK +TKWEL RVVKELRKYKR
Sbjct: 61  TVDYERRPMMKWNAIYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKR 120

Query: 121 FERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGA 180
           +++ALE+YDWM+NR+ERF L+ SDAAIQLDLI+KVRG+ SAE++FLRLPN  KDRRIYGA
Sbjct: 121 YQQALEVYDWMNNRQERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGA 180

Query: 181 LLNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENS 240
           LLNAY + R REKAE+L+++MR K + TH LP+NVMMTLYMN+ EY+KV+ ++SEM E +
Sbjct: 181 LLNAYVRNRMREKAESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKN 240

Query: 241 IQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKA 300
           I+LDIYSYNIWLSSCGLQGS +KME+V+EQMK D +IN NWTTFSTMATMYIKMG  EKA
Sbjct: 241 IKLDIYSYNIWLSSCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKA 300

Query: 301 EECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISA 360
           E+CLRRVESRI GRDRIPYHYL+SLYG+VGNKEE+YRVWNIYK++FP+IPNLGYHA+IS+
Sbjct: 301 EDCLRRVESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISS 360

Query: 361 LIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPN 420
           L+R+ D+EGAEKIYEEWL++K++YDPRIANLF+  +V +GN  KAESFFDHM+E GGKPN
Sbjct: 361 LVRMDDIEGAEKIYEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPN 420

Query: 421 SSTWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKE 480
           S +WEIL   H  E R S+AL+  KEAF+  GSKSW+P P NV ++F LCE+E D+ASKE
Sbjct: 421 SHSWEILAQGHISERRTSEALSCLKEAFATPGSKSWKPNPANVSSFFKLCEEEVDMASKE 480

Query: 481 VLVGLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDD-SEMFL 536
            L   LRQ  +L+DK YA L+G+    +  +E+S K     D+ID  E + D+ SEM +
Sbjct: 481 ALASFLRQSGHLKDKAYALLLGM---PVTGDELSTKEERTEDQIDNEENDGDNGSEMLV 532

BLAST of Cucsa.257280 vs. TAIR10
Match: AT1G02150.1 (AT1G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 661.8 bits (1706), Expect = 3.7e-190
Identity = 321/511 (62.82%), Postives = 401/511 (78.47%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60
           MLLQ +V +R V L S  SYSR    L    P        +   ++ CSISQV+ YGTVD
Sbjct: 1   MLLQAAVQNRNVPLASSASYSRL---LRCRSPVVSVAALSKKTAAIVCSISQVYGYGTVD 60

Query: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120
           +ERRP+ +WNAIY++ISLME PELG+ASVLNQWE  G+ +TKWEL RVVKELRKYKR  +
Sbjct: 61  YERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQ 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180
           ALE+YDWM+NR ERFRL+ SDAAIQLDLI KVRGI  AEE+FL+LP + KDRR+YG+LLN
Sbjct: 121 ALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLN 180

Query: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240
           AY + + REKAE LL  MR KG+  HPLPFNVMMTLYMN++EY+KV+++V EM +  I+L
Sbjct: 181 AYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300
           DIYSYNIWLSSCG  GS EKME VY+QMK D +I  NWTTFSTMATMYIKMG  EKAE+ 
Sbjct: 241 DIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360
           LR+VE+RI GR+RIPYHYL+SLYGS+GNK+E+YRVW++YK+V P+IPNLGYHA++S+L+R
Sbjct: 301 LRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVR 360

Query: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420
           +GD+EGAEK+YEEWL VKS+YDPRI NL +  YVK      AE  FDHMVE+GGKP+SST
Sbjct: 361 MGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 420

Query: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480
           WEIL   HT++  +S+AL   + AFSAEGS +WRPK   +  +F LCE+E D+ SKE ++
Sbjct: 421 WEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVL 480

Query: 481 GLLRQPKYLQDKTYASLIGL-LDETIDNNEV 511
            LLRQ   L+DK+Y +LI +  + T++N+E+
Sbjct: 481 ELLRQSGDLEDKSYLALIDVDENRTVNNSEI 508

BLAST of Cucsa.257280 vs. TAIR10
Match: AT1G60770.1 (AT1G60770.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 274.2 bits (700), Expect = 1.7e-73
Identity = 149/416 (35.82%), Postives = 226/416 (54.33%), Query Frame = 1

Query: 72  IYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSNR 131
           +Y R+      E+     LNQ+    K++ KWE+   +K+LR    +  AL++ + M  R
Sbjct: 25  LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEER 84

Query: 132 EERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKA 191
                 T SD AI LDL++K R I + E YF+ LP   K    YG+LLN Y K    EKA
Sbjct: 85  G--MNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKA 144

Query: 192 ENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSS 251
           E LL KM+    T   + +N +MTLY    E EKV +++ E+   ++  D Y+YN+W+ +
Sbjct: 145 EGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRA 204

Query: 252 CGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIVGR 311
                    +E V E+M +D  +  +WTT+S MA++Y+  GL +KAE+ L+ +E +   R
Sbjct: 205 LAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQR 264

Query: 312 DRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKIY 371
           D   Y +LI+LYG +G   E+YR+W   +   P   N+ Y  +I  L+++ D+ GAE ++
Sbjct: 265 DFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLF 324

Query: 372 EEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHTKE 431
           +EW    STYD RI N+ IG Y +EG   KA    +     GGK N+ TWEI +D + K 
Sbjct: 325 KEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKS 384

Query: 432 GRVSDALASWKEAFS---AEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLR 485
           G ++ AL    +A S    +G K W P P  V A     E++ D+   E L+ +L+
Sbjct: 385 GDMARALECMSKAVSIGKGDGGK-WLPSPETVRALMSYFEQKKDVNGAENLLEILK 437

BLAST of Cucsa.257280 vs. TAIR10
Match: AT2G20710.1 (AT2G20710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 268.9 bits (686), Expect = 7.0e-72
Identity = 148/422 (35.07%), Postives = 237/422 (56.16%), Query Frame = 1

Query: 65  PMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEI 124
           P+  ++ + RR++   +P      VL+ W ++G  +   EL  ++K LRK+ RF  AL+I
Sbjct: 33  PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92

Query: 125 YDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAK 184
            DWMS       ++  D AI+LDLI+KV G+  AE++F  +P   ++  +YGALLN YA 
Sbjct: 93  SDWMSEHRVH-EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152

Query: 185 GRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYS 244
            +   KAE + ++M+  GF    LP+NVM+ LY+   +Y  VE L+ EM + +++ DI++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 212

Query: 245 YNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRV 304
            N  L +  +    E ME+   + + D+ ++ +W T++  A  YIK GL EKA E LR+ 
Sbjct: 213 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 272

Query: 305 ESRIVGRDR-IPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGD 364
           E  +  + R   Y  L+S YG+ G KEE+YR+W++YK +     N GY ++ISAL+++ D
Sbjct: 273 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 332

Query: 365 VEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEI 424
           +E  EKI EEW    S +D RI +L I  Y K+G   KAE   + +V+     ++STWE 
Sbjct: 333 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 392

Query: 425 LVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLL 484
           L   +   G++  A+  WK A        WRP    +++  D  E + D+     ++ LL
Sbjct: 393 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 451

Query: 485 RQ 486
            +
Sbjct: 453 SE 451

BLAST of Cucsa.257280 vs. TAIR10
Match: AT5G27460.1 (AT5G27460.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 259.6 bits (662), Expect = 4.2e-69
Identity = 147/425 (34.59%), Postives = 228/425 (53.65%), Query Frame = 1

Query: 74  RRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSNREE 133
           + I     P     S+L +  + G  ++  EL  + K L +  R++ AL++ +WM N+++
Sbjct: 42  KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKD 101

Query: 134 RFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRI----YGALLNAYAKGRQRE 193
               +  D A++LDLI K  G+K  EEYF +L +     R+    Y  LL AY K +  +
Sbjct: 102 -IEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVK 161

Query: 194 KAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWL 253
           +AE L+EK+   GF   P PFN MM LY    +YEKV  +VS M  N I  ++ SYN+W+
Sbjct: 162 EAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWM 221

Query: 254 SSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIV 313
           ++C        +E VY++M  D+++   W++  T+A +YIK G  EKA   L   E  + 
Sbjct: 222 NACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLN 281

Query: 314 GRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEK 373
             +R+ Y +LI+LY S+GNKE + R+W + K+V   I  + Y  ++S+L++ GD+E AE+
Sbjct: 282 RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAER 341

Query: 374 IYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHT 433
           ++ EW      YD R++N+ +G YV+ G   KAES    ++E GG PN  TWEIL++   
Sbjct: 342 VFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWV 401

Query: 434 KEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV------GLL 489
           K   +  A+ +  + F       WRP    V+A  +  EKE  I      V      GL 
Sbjct: 402 KCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLA 461

BLAST of Cucsa.257280 vs. TAIR10
Match: AT4G02820.1 (AT4G02820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-68
Identity = 138/409 (33.74%), Postives = 241/409 (58.92%), Query Frame = 1

Query: 90  LNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSNREERFRLTTSDAAIQLDLI 149
           + +W+ EG ++ K+EL+R+V+ELRK KR++ ALEI +WM  +E+  +L   D A+ LDLI
Sbjct: 81  IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQED-IKLQAGDYAVHLDLI 140

Query: 150 SKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKAENLLEKMRTKGFTTHPLP 209
           SK+RG+ SAE++F  +P+ ++      +LL++Y + +  +KAE L EKM   GF    LP
Sbjct: 141 SKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 200

Query: 210 FNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMK 269
           +N M+++Y++  ++EKV  L+ E+   +   DI +YN+WL++       E  E+VY + K
Sbjct: 201 YNHMLSMYISRGQFEKVPVLIKELKIRTSP-DIVTYNLWLTAFASGNDVEGAEKVYLKAK 260

Query: 270 QDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNK 329
           +++ +N +W T+S +  +Y K   +EKA   L+ +E  +  ++R+ Y  LISL+ ++G+K
Sbjct: 261 EEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDK 320

Query: 330 EEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLF 389
           + +   W   K+ F  + +  Y ++ISA++++G+ E A+ +Y+EW +V  T D RI NL 
Sbjct: 321 DGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLI 380

Query: 390 IGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHTKEGRVSDALASWKEAFSAEG 449
           +  Y+        E F++ +VE G  P+ STWEIL   + K   +   L  + +A   + 
Sbjct: 381 LAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI--DS 440

Query: 450 SKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLRQPKYLQDKTYASLI 499
            K W      V       E++G++   E L+ LL++  Y+  + Y SL+
Sbjct: 441 VKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484

BLAST of Cucsa.257280 vs. NCBI nr
Match: gi|449432307|ref|XP_004133941.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis sativus])

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60
           MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60

Query: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120
           FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER
Sbjct: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180

Query: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240
           AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL
Sbjct: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300
           DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360
           LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420
           VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420

Query: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480
           WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV
Sbjct: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 538
           GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL
Sbjct: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 537

BLAST of Cucsa.257280 vs. NCBI nr
Match: gi|659075585|ref|XP_008438222.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis melo])

HSP 1 Score: 1028.5 bits (2658), Expect = 4.3e-297
Identity = 506/537 (94.23%), Postives = 522/537 (97.21%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60
           MLLQTSVHHRTVSLPS +SYSRKFLP IQSQPFFHNVNYRRL LSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120
           FERRPM KWNAIYRRISLMENPELGSASVLNQWENEGKN+TKWELSRVVKELRKYKRFER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAE+YFLRLP++LKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240
           AYAK RQREKAENLL KMRTKG+ THPLPFNVMMTLYMNVKEYEKV+SLVSEMTE SIQL
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300
           DIYSYNIWLSSCGLQGST+KMEEVYEQMKQD+TINANWTTFSTMATMYIKMGL+EKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360
           LR+VESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420
           VGDVEGAEKIYEEWLTVK+TYDPRIANLFIGWYVKE N SKAE FFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480
           WEIL D HTKEGRVSDALASWKEAFS+EGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 538
           G LRQPKYLQDK+YASLIGLLDETIDN+EVSEKGS+INDEIDKTEYESDDSEM LKL
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

BLAST of Cucsa.257280 vs. NCBI nr
Match: gi|645253007|ref|XP_008232381.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Prunus mume])

HSP 1 Score: 766.9 bits (1979), Expect = 2.3e-218
Identity = 372/539 (69.02%), Postives = 456/539 (84.60%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLP--SPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGT 60
           M LQTSVHHR  +LP  S +SYS      I + P   ++N++RLP S++CSISQVH+YGT
Sbjct: 1   MPLQTSVHHRHHNLPLSSSLSYSTILPCKIPTLPLPSSINFQRLP-SISCSISQVHNYGT 60

Query: 61  VDFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRF 120
           VD+ERRPM KWNAIYR+ISL ++PE+ SA VLNQWE EG+ +TKWEL RVVKELRKYKR+
Sbjct: 61  VDYERRPMVKWNAIYRKISLTDDPEVRSADVLNQWEKEGRKLTKWELCRVVKELRKYKRY 120

Query: 121 ERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGAL 180
           +RALE+YDWMSNR ERFR++TSDAAIQLDL++KVRG+ SAE YFL LP+ LKDRRIYGAL
Sbjct: 121 DRALEVYDWMSNRGERFRISTSDAAIQLDLVAKVRGVASAENYFLSLPDTLKDRRIYGAL 180

Query: 181 LNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSI 240
           LNAY + R +EKAE+LL+KMR+KG     LPFNVMMTLYMN+KEY+KV+S++SEM E +I
Sbjct: 181 LNAYVRTRMKEKAESLLDKMRSKGHALQSLPFNVMMTLYMNLKEYDKVDSIISEMMEKNI 240

Query: 241 QLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAE 300
           QLDIYSYNIWLSS G QGS E+ME+V+EQMK DRT+N NWTTFSTMATMYIKMG +EKAE
Sbjct: 241 QLDIYSYNIWLSSRGSQGSEERMEQVFEQMKLDRTVNPNWTTFSTMATMYIKMGQLEKAE 300

Query: 301 ECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISAL 360
            CL++VESRI GRDRIPYHYL+SLYG+VGNKEE+YRVWNIYK+ FP+IPNLGYHAI+S+L
Sbjct: 301 ACLKKVESRITGRDRIPYHYLLSLYGNVGNKEELYRVWNIYKSSFPSIPNLGYHAIMSSL 360

Query: 361 IRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNS 420
           +RVGDVEGAEKIYEEWLTVKSTYDPRIAN+FI +Y+K+G+  KA+SF+DHMV+VGGKPNS
Sbjct: 361 LRVGDVEGAEKIYEEWLTVKSTYDPRIANVFIAYYIKDGDFEKAQSFYDHMVDVGGKPNS 420

Query: 421 STWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEV 480
           STWE L + HT+E R+S+AL+ WKEAFSAEGSKSWRPKP NV A+ +LCE+E +  SKEV
Sbjct: 421 STWETLAEGHTEEQRISEALSCWKEAFSAEGSKSWRPKPVNVSAFLELCEQEANSVSKEV 480

Query: 481 LVGLLRQPKYLQDKTYASLIGLLDETIDNNEVSEK--GSNINDEIDKTEYESDDSEMFL 536
            +GLL+Q   L++K+YASLIGL DE + ++++S K   +NI ++ D  +   D SE+ L
Sbjct: 481 FMGLLKQSGQLKNKSYASLIGLADEDVSDDDLSLKKDRTNITNDDDDEKEAGDGSELLL 538

BLAST of Cucsa.257280 vs. NCBI nr
Match: gi|1009138398|ref|XP_015886567.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Ziziphus jujuba])

HSP 1 Score: 761.9 bits (1966), Expect = 7.4e-217
Identity = 372/540 (68.89%), Postives = 447/540 (82.78%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCS-ISQVHSYGTV 60
           MLLQ+S+HH  V+L S +S S      + +     ++NY RL  S+TCS ISQVH+YGTV
Sbjct: 1   MLLQSSMHHHKVALSSSLSSSPPLAWKVPTFTLHQSINYNRL--SITCSSISQVHNYGTV 60

Query: 61  DFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFE 120
           D+ERRP+ KWN IY+RISLMENPELGSA+VLNQWE EG+ +TKWEL RVVKELRKYKR+E
Sbjct: 61  DYERRPLIKWNIIYKRISLMENPELGSATVLNQWEKEGRKLTKWELCRVVKELRKYKRYE 120

Query: 121 RALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALL 180
           RALE+Y+WM+NR ERFRL+TSDAAIQLDLI+KVRG+ SAE YF++LP+ LKDRRIYGALL
Sbjct: 121 RALEVYEWMNNRGERFRLSTSDAAIQLDLIAKVRGVSSAEGYFMKLPDSLKDRRIYGALL 180

Query: 181 NAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQ 240
           NAY + + +EKAE+LL++MR+KG   H LP+NVMMTLYMN+KEYEKV+ LVSEM E +I+
Sbjct: 181 NAYVRAKMKEKAESLLDRMRSKGHALHSLPYNVMMTLYMNLKEYEKVDLLVSEMMEKNIK 240

Query: 241 LDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEE 300
           LDIYSYNIWLSS G QGS EKMEEV++QMK DRTIN NWTTFST+ATMYIKM  +EKAEE
Sbjct: 241 LDIYSYNIWLSSRGSQGSAEKMEEVFQQMKLDRTINPNWTTFSTLATMYIKMEQIEKAEE 300

Query: 301 CLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALI 360
           CL++VESRI GRDRIPYHYL+SLYGSVGNKEE+YR+WN+YK VFP IPNLGYHAII +L+
Sbjct: 301 CLKKVESRITGRDRIPYHYLLSLYGSVGNKEEIYRIWNVYKAVFPNIPNLGYHAIICSLL 360

Query: 361 RVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSS 420
           R+GD+EGAEKIY+EWL+V+S+YDPRIANLFI  YVKEGN  KA+ FFDHM+EVGGKPNSS
Sbjct: 361 RIGDIEGAEKIYDEWLSVRSSYDPRIANLFITCYVKEGNLEKAKGFFDHMIEVGGKPNSS 420

Query: 421 TWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVL 480
           TWE L + HT E    +AL+ WKEAF+ EGSKSWRPKP NV  + DLCE+E D+ASKEVL
Sbjct: 421 TWETLAEGHTAEKNTFEALSCWKEAFAEEGSKSWRPKPINVTLFLDLCEQEADLASKEVL 480

Query: 481 VGLLRQPKYLQDKTYASLIGLLDETID----NNEVSEKGSNINDEIDKTEYESDDSEMFL 536
           VGLLRQ  Y++DK+YASL+GL DE  +    N   SE+G+  +DE D  E + D S M +
Sbjct: 481 VGLLRQAGYIKDKSYASLVGLSDEANNDDNGNRMTSERGNPDDDEED-NENDEDGSGMLI 537

BLAST of Cucsa.257280 vs. NCBI nr
Match: gi|596021102|ref|XP_007218971.1| (hypothetical protein PRUPE_ppa003822mg [Prunus persica])

HSP 1 Score: 759.2 bits (1959), Expect = 4.8e-216
Identity = 368/539 (68.27%), Postives = 452/539 (83.86%), Query Frame = 1

Query: 1   MLLQTSVHHRTVSLP--SPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGT 60
           M LQTSVHH   +LP  S +SYS      I + P   ++N++RLP S++CSISQVH+YGT
Sbjct: 1   MPLQTSVHHHHHNLPLSSSLSYSTLLPCKIPTLPLPSSINFQRLP-SISCSISQVHNYGT 60

Query: 61  VDFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRF 120
           VD+ERRPM KWNAIYR+ISL ++PE+ SA VLNQWE EG+ +TKWEL RVVKELRKYKR+
Sbjct: 61  VDYERRPMVKWNAIYRKISLTDDPEVRSADVLNQWEKEGRKLTKWELCRVVKELRKYKRY 120

Query: 121 ERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGAL 180
           +RALE+YDWMSNR ERFR++TSDAAIQLDL++KVRG+ SAE YFL LP+ LKDRRIYGAL
Sbjct: 121 DRALEVYDWMSNRGERFRISTSDAAIQLDLVAKVRGVASAENYFLSLPDTLKDRRIYGAL 180

Query: 181 LNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSI 240
           LNAY + R +EKAE+LL+KMR+KG     LPFNVMMTLYMN+KEY+KV+S++SEM E +I
Sbjct: 181 LNAYVRTRMKEKAESLLDKMRSKGHALQSLPFNVMMTLYMNLKEYDKVDSIISEMMEKNI 240

Query: 241 QLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAE 300
           QLDIYSYNIWLSS G QGS E+ME+V+EQMK DRT+N NWTTFSTMATMYIKMG +EKAE
Sbjct: 241 QLDIYSYNIWLSSRGSQGSEERMEQVFEQMKLDRTVNPNWTTFSTMATMYIKMGQLEKAE 300

Query: 301 ECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISAL 360
            CL++VESRI GRDRIPYHYL+SLYG+VGNKEE+YRVWNIYK+ FP+IPNLGYHAI+S+L
Sbjct: 301 ACLKKVESRITGRDRIPYHYLLSLYGNVGNKEELYRVWNIYKSSFPSIPNLGYHAIMSSL 360

Query: 361 IRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNS 420
           +RVGDVEGAEKIYEEWLTVKSTYDPRIAN+FI +Y+K+G+  KA+SF+DHMV+VGGKPNS
Sbjct: 361 LRVGDVEGAEKIYEEWLTVKSTYDPRIANVFIAYYIKDGDFEKAQSFYDHMVDVGGKPNS 420

Query: 421 STWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEV 480
           +TWE L + H +E R+S+AL+ WKEAFSAEGSKSWRPKP NV A+ +LCE+E +  SKE 
Sbjct: 421 TTWETLAEGHIEEQRISEALSCWKEAFSAEGSKSWRPKPVNVSAFLELCEQEANSVSKEF 480

Query: 481 LVGLLRQPKYLQDKTYASLIGLLDETIDNNEVSEK--GSNINDEIDKTEYESDDSEMFL 536
            +GLL+Q   L++K+YASLIGL DE + ++++S K   +NI  + D  +   D SE+ L
Sbjct: 481 FMGLLKQSGQLKNKSYASLIGLADEDVSDDDLSLKKDRTNITKDDDDEKEAGDGSELLL 538

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR3_ARATH6.6e-18962.82Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN... [more]
PPR86_ARATH2.9e-7235.82Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN... [more]
PP166_ARATH1.2e-7035.07Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
PP400_ARATH7.5e-6834.59Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN... [more]
PP302_ARATH2.2e-6733.74Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0L6I4_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127020 PE=4 SV=1[more]
M5XM86_PRUPE3.4e-21668.27Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003822mg PE=4 SV=1[more]
U5FUI5_POPTR5.4e-21467.10Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
B9SKK8_RICCO5.4e-21468.93Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
B9GP78_POPTR1.6e-21367.35Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
Match NameE-valueIdentityDescription
AT1G02150.13.7e-19062.82 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G60770.11.7e-7335.82 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G20710.17.0e-7235.07 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G27460.14.2e-6934.59 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G02820.11.2e-6833.74 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449432307|ref|XP_004133941.1|0.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis sativu... [more]
gi|659075585|ref|XP_008438222.1|4.3e-29794.23PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis melo][more]
gi|645253007|ref|XP_008232381.1|2.3e-21869.02PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Prunus mume][more]
gi|1009138398|ref|XP_015886567.1|7.4e-21768.89PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Ziziphus jujub... [more]
gi|596021102|ref|XP_007218971.1|4.8e-21668.27hypothetical protein PRUPE_ppa003822mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.257280.1Cucsa.257280.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 387..413
score: 0.006coord: 174..203
score: 3.0E-4coord: 351..374
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 228..288
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 174..203
score: 7.7E-5coord: 210..241
score: 0.0019coord: 243..271
score: 3.8E-6coord: 387..417
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 277..307
score: 7.443coord: 312..342
score: 5.503coord: 347..377
score: 6.347coord: 206..240
score: 7.574coord: 171..205
score: 10.413coord: 417..452
score: 7.158coord: 241..271
score: 8.824coord: 101..135
score: 5.514coord: 382..416
score: 9
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 343..447
score: 4.0E-12coord: 170..307
score: 4.0
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 79..428
score: 2.0
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..531
score: 1.7E
NoneNo IPR availablePANTHERPTHR24015:SF27SUBFAMILY NOT NAMEDcoord: 1..531
score: 1.7E

The following gene(s) are paralogous to this gene:

None