CmaCh06G011610 (gene) Cucurbita maxima (Rimu)

NameCmaCh06G011610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCma_Chr06 : 7818873 .. 7821394 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAACAGACAAGGGCAAATAAGTAAATTCCCAAAACCTTATCGAGAAACTGAAAAGCACAGAGCTTGCGCGCATTCGCACGCACTCTCTTCAACCCTAACAGAGACGGCGGTGGAGACGACGACGACGACGACGACGACGAGGATGCTTCTCCAAACTTCCGTTCACCACTACAATGTCTCTCTCTCCTCTTCGACTTCTTATTCGCATAAATTGCCGCCTGTAATTCAATCTCAGGCTTTTTTCCGGAATGTAAATTATCGGAGGCTTCCACTCTCTATAACCTGCTCAATTTCCCAAACTCATAGCTATGGAACTGTGGATTTCGAGCGAAGGCCTATGGTGAAATGGAACGCAATTTACAGAAGGATATCGCTGATGGAAAATCCCGAGTTAGGCTCTGCGAGTGTACTGAACCAGTGGGAGAACGAGGGCAAAAAGATTACGAAATGGGAGATTTTTCGAGTCATTAAGGAGTTGAGAAAGTACAGGCGCTATGAAAGGGCTTTGGAGGTAAAGTAGATAATGATTTTAGGTAGTTTTTGGATGCATATACTGGAGTTTATGAATTGGTTCAATTTGGTTGCGAATTGCGATGTTCGATTCATCTTTTATTGGAGAAAAAAGAGGTAGAAATTATCATCGATTCAAATAGGTTTCTGCTAACTCTAGTTTAGCTACTTGGATTGCATTTTTATGTTTAATTTGCTTCTTTAGCAACCATGGAAGCTATTGAAGCTTTAATCTTCGGATTTTGGACTGGATTACTTATTTCTTATGTGAAATTCAATTGTCGTAAGAGTTGTTTGTGCAAATCTTAAGTGTACAAGCTTTGATGATCATCTAGTTCTTGGTTGAAATCCTCACTCTTGCATGAACTAATACTGATTCGCTTCTTACTAAATCGAAATATACAAGAAATCAAGCTTTTCTGTTTGTTAATTGGGAGGCATTGATATATTTCATCGAAGAATATTGAATTATCATCTTTTGGATATTTCCCTCTTCCATTTCAGGTCTCCTATCTTCCTAATTCATTGCTTATGATGGAGAAATTTTACGTTTTCATCATTTAGCTGAACTCAATGCTGGTTTATGCATGTTCTTCATTTTTCTGTTCATACATATGATGTGGGTCTGATAATTTGAATACGGTTCATTAAGATGATGAACGATCGTTCTTAAGTTTGCAATTTGTTACGGTTCGGTGATCGTGTCGGTATGTAGATTCTTGAAGTTGTTTCGATTCTAAAATTTGATGTTTTTGTTTGTAGATATATGATTGGATGAGCAATAGAGGAGAGACATTTAAATTAACAGCTAGTGATGCTGCTATACAATTGGATCTTATTTCAAAAGTCTATGGAATTGCGAGTGCTGAAGATTACTTCGTAAGGTTGCCTAAAAATTTGAAGGATAGAAGGACATATGGAGCTCTTCTGAATGCCTATGTGAAAGCAAGACAGAGAGAAAAGGCAGAAACTCTACTTGCAAAAATGAGAACTAAAGGTTATGCGATTCACACGCTTTCGTTCAATGTAATGATGACTCTCTACGTGAACTTCAAAGAGTACGAGAAAGTCGAGTCGTTAGTGTCGGAAATGATAGAAAAGGGCATTCGCCTAGACATTTACTCGTATAATATATGGATATCATCTCGTGGATTACAAGGATCGATTGAGAAAATGGAAGAAGTGTATGAGCGGATGAAGCAAGACAGGACCATCAATGCCAATTGGACTACATTCAGTACCATGGCCACAATGTATATTAAGACGGGACTGATCGAAAAGGCTGAAGAATGCTTGAGGAGGGTCGAAAGTAGAATTGTTGGTCGGGATCGAATACCGTTTCATTATCTGATGAGTTTGTATGGTAGTGTTGGTAACAAAGAAGAAACTTATCGAGTGTGGAAGGTTTACAAAACTATTTTCCCGACCATTCCGAATTTGGGATTCCATGCTATAATCTCTGCTCTAATCAGGGCAGGGGACATTGAAGGTGCCGAAAAAATTTATGAGGAGTGGCTATCCGTTAAGACAGCGTACGACCCTAGAATTGCCAATCTTTTCATGGGGTGGTATGTTAAGGAAGGCATGTCGAGCAAAGCTGAGAGCTTCTTTAATCACATGGTTGAAGCTGGGGGAAAGCCAAATTCGAGTTCATGGGAGATCCTCGCCGATGGGCTTTCGAAAGAGGGTCGAGTTTCTGACGCTTTAGCTAGTTGGAAAGAAGCGTTTTCTGCCGAGGGTTCGAGGACTTGGAGGCCAAAGCACTTTAAGGTGTTGGCTTTCTTCAACCTCTGTGAGAAAGAAGGCGACATCGCCAGCAAGGAGGTTCTTGTTGGATTGTTAAGGCAGTCGAAATGTCTTCAAGACAAAGCATACGTATCACTCATTGGTTTGTCGGACGAGACAATCGACAACGATGTAGTTTCGGGGGAAGGTAGCAATATCGACGACGAAAGTGACAAAACCGTGTATGAGTCTGATGATTCTGAGATGCTTCTCGAGATGTGA

mRNA sequence

ATGAGAAACAGACAAGGGCAAATAAGTAAATTCCCAAAACCTTATCGAGAAACTGAAAAGCACAGAGCTTGCGCGCATTCGCACGCACTCTCTTCAACCCTAACAGAGACGGCGGTGGAGACGACGACGACGACGACGACGACGAGGATGCTTCTCCAAACTTCCGTTCACCACTACAATGTCTCTCTCTCCTCTTCGACTTCTTATTCGCATAAATTGCCGCCTGTAATTCAATCTCAGGCTTTTTTCCGGAATGTAAATTATCGGAGGCTTCCACTCTCTATAACCTGCTCAATTTCCCAAACTCATAGCTATGGAACTGTGGATTTCGAGCGAAGGCCTATGGTGAAATGGAACGCAATTTACAGAAGGATATCGCTGATGGAAAATCCCGAGTTAGGCTCTGCGAGTGTACTGAACCAGTGGGAGAACGAGGGCAAAAAGATTACGAAATGGGAGATTTTTCGAGTCATTAAGGAGTTGAGAAAGTACAGGCGCTATGAAAGGGCTTTGGAGATATATGATTGGATGAGCAATAGAGGAGAGACATTTAAATTAACAGCTAGTGATGCTGCTATACAATTGGATCTTATTTCAAAAGTCTATGGAATTGCGAGTGCTGAAGATTACTTCGTAAGGTTGCCTAAAAATTTGAAGGATAGAAGGACATATGGAGCTCTTCTGAATGCCTATGTGAAAGCAAGACAGAGAGAAAAGGCAGAAACTCTACTTGCAAAAATGAGAACTAAAGGTTATGCGATTCACACGCTTTCGTTCAATGTAATGATGACTCTCTACGTGAACTTCAAAGAGTACGAGAAAGTCGAGTCGTTAGTGTCGGAAATGATAGAAAAGGGCATTCGCCTAGACATTTACTCGTATAATATATGGATATCATCTCGTGGATTACAAGGATCGATTGAGAAAATGGAAGAAGTGTATGAGCGGATGAAGCAAGACAGGACCATCAATGCCAATTGGACTACATTCAGTACCATGGCCACAATGTATATTAAGACGGGACTGATCGAAAAGGCTGAAGAATGCTTGAGGAGGGTCGAAAGTAGAATTGTTGGTCGGGATCGAATACCGTTTCATTATCTGATGAGTTTGTATGGTAGTGTTGGTAACAAAGAAGAAACTTATCGAGTGTGGAAGGTTTACAAAACTATTTTCCCGACCATTCCGAATTTGGGATTCCATGCTATAATCTCTGCTCTAATCAGGGCAGGGGACATTGAAGGTGCCGAAAAAATTTATGAGGAGTGGCTATCCGTTAAGACAGCGTACGACCCTAGAATTGCCAATCTTTTCATGGGGTGGTATGTTAAGGAAGGCATGTCGAGCAAAGCTGAGAGCTTCTTTAATCACATGGTTGAAGCTGGGGGAAAGCCAAATTCGAGTTCATGGGAGATCCTCGCCGATGGGCTTTCGAAAGAGGGTCGAGTTTCTGACGCTTTAGCTAGTTGGAAAGAAGCGTTTTCTGCCGAGGGTTCGAGGACTTGGAGGCCAAAGCACTTTAAGGTGTTGGCTTTCTTCAACCTCTGTGAGAAAGAAGGCGACATCGCCAGCAAGGAGGTTCTTGTTGGATTGTTAAGGCAGTCGAAATGTCTTCAAGACAAAGCATACGTATCACTCATTGGTTTGTCGGACGAGACAATCGACAACGATGTAGTTTCGGGGGAAGGTAGCAATATCGACGACGAAAGTGACAAAACCGTGTATGAGTCTGATGATTCTGAGATGCTTCTCGAGATGTGA

Coding sequence (CDS)

ATGAGAAACAGACAAGGGCAAATAAGTAAATTCCCAAAACCTTATCGAGAAACTGAAAAGCACAGAGCTTGCGCGCATTCGCACGCACTCTCTTCAACCCTAACAGAGACGGCGGTGGAGACGACGACGACGACGACGACGACGAGGATGCTTCTCCAAACTTCCGTTCACCACTACAATGTCTCTCTCTCCTCTTCGACTTCTTATTCGCATAAATTGCCGCCTGTAATTCAATCTCAGGCTTTTTTCCGGAATGTAAATTATCGGAGGCTTCCACTCTCTATAACCTGCTCAATTTCCCAAACTCATAGCTATGGAACTGTGGATTTCGAGCGAAGGCCTATGGTGAAATGGAACGCAATTTACAGAAGGATATCGCTGATGGAAAATCCCGAGTTAGGCTCTGCGAGTGTACTGAACCAGTGGGAGAACGAGGGCAAAAAGATTACGAAATGGGAGATTTTTCGAGTCATTAAGGAGTTGAGAAAGTACAGGCGCTATGAAAGGGCTTTGGAGATATATGATTGGATGAGCAATAGAGGAGAGACATTTAAATTAACAGCTAGTGATGCTGCTATACAATTGGATCTTATTTCAAAAGTCTATGGAATTGCGAGTGCTGAAGATTACTTCGTAAGGTTGCCTAAAAATTTGAAGGATAGAAGGACATATGGAGCTCTTCTGAATGCCTATGTGAAAGCAAGACAGAGAGAAAAGGCAGAAACTCTACTTGCAAAAATGAGAACTAAAGGTTATGCGATTCACACGCTTTCGTTCAATGTAATGATGACTCTCTACGTGAACTTCAAAGAGTACGAGAAAGTCGAGTCGTTAGTGTCGGAAATGATAGAAAAGGGCATTCGCCTAGACATTTACTCGTATAATATATGGATATCATCTCGTGGATTACAAGGATCGATTGAGAAAATGGAAGAAGTGTATGAGCGGATGAAGCAAGACAGGACCATCAATGCCAATTGGACTACATTCAGTACCATGGCCACAATGTATATTAAGACGGGACTGATCGAAAAGGCTGAAGAATGCTTGAGGAGGGTCGAAAGTAGAATTGTTGGTCGGGATCGAATACCGTTTCATTATCTGATGAGTTTGTATGGTAGTGTTGGTAACAAAGAAGAAACTTATCGAGTGTGGAAGGTTTACAAAACTATTTTCCCGACCATTCCGAATTTGGGATTCCATGCTATAATCTCTGCTCTAATCAGGGCAGGGGACATTGAAGGTGCCGAAAAAATTTATGAGGAGTGGCTATCCGTTAAGACAGCGTACGACCCTAGAATTGCCAATCTTTTCATGGGGTGGTATGTTAAGGAAGGCATGTCGAGCAAAGCTGAGAGCTTCTTTAATCACATGGTTGAAGCTGGGGGAAAGCCAAATTCGAGTTCATGGGAGATCCTCGCCGATGGGCTTTCGAAAGAGGGTCGAGTTTCTGACGCTTTAGCTAGTTGGAAAGAAGCGTTTTCTGCCGAGGGTTCGAGGACTTGGAGGCCAAAGCACTTTAAGGTGTTGGCTTTCTTCAACCTCTGTGAGAAAGAAGGCGACATCGCCAGCAAGGAGGTTCTTGTTGGATTGTTAAGGCAGTCGAAATGTCTTCAAGACAAAGCATACGTATCACTCATTGGTTTGTCGGACGAGACAATCGACAACGATGTAGTTTCGGGGGAAGGTAGCAATATCGACGACGAAAGTGACAAAACCGTGTATGAGTCTGATGATTCTGAGATGCTTCTCGAGATGTGA

Protein sequence

MRNRQGQISKFPKPYRETEKHRACAHSHALSSTLTETAVETTTTTTTTRMLLQTSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTVDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYERALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLNAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRLDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEECLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIRAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSSWEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLVGLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLLEM
BLAST of CmaCh06G011610 vs. Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 645.2 bits (1663), Expect = 6.9e-184
Identity = 317/514 (61.67%), Postives = 403/514 (78.40%), Query Frame = 1

Query: 50  MLLQTSVHHYNVSLSSSTSYSHKL---PPVIQSQAFFRNVNYRRLPLSITCSISQTHSYG 109
           MLLQ +V + NV L+SS SYS  L    PV+   A  +         +I CSISQ + YG
Sbjct: 1   MLLQAAVQNRNVPLASSASYSRLLRCRSPVVSVAALSKKT------AAIVCSISQVYGYG 60

Query: 110 TVDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRR 169
           TVD+ERRP+V+WNAIY++ISLME PELG+ASVLNQWE  G+K+TKWE+ RV+KELRKY+R
Sbjct: 61  TVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKR 120

Query: 170 YERALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGA 229
             +ALE+YDWM+NRGE F+L+ASDAAIQLDLI KV GI  AE++F++LP+N KDRR YG+
Sbjct: 121 ANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGS 180

Query: 230 LLNAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKG 289
           LLNAYV+A+ REKAE LL  MR KGYA+H L FNVMMTLY+N +EY+KV+++V EM +K 
Sbjct: 181 LLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKD 240

Query: 290 IRLDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKA 349
           IRLDIYSYNIW+SS G  GS+EKME VY++MK D +I  NWTTFSTMATMYIK G  EKA
Sbjct: 241 IRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKA 300

Query: 350 EECLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISA 409
           E+ LR+VE+RI GR+RIP+HYL+SLYGS+GNK+E YRVW VYK++ P+IPNLG+HA++S+
Sbjct: 301 EDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSS 360

Query: 410 LIRAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPN 469
           L+R GDIEGAEK+YEEWL VK++YDPRI NL M  YVK      AE  F+HMVE GGKP+
Sbjct: 361 LVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPS 420

Query: 470 SSSWEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKE 529
           SS+WEILA G +++  +S+AL   + AFSAEGS  WRPK   +  FF LCE+E D+ SKE
Sbjct: 421 SSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKE 480

Query: 530 VLVGLLRQSKCLQDKAYVSLIGLSD-ETIDNDVV 560
            ++ LLRQS  L+DK+Y++LI + +  T++N  +
Sbjct: 481 AVLELLRQSGDLEDKSYLALIDVDENRTVNNSEI 508

BLAST of CmaCh06G011610 vs. Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.6e-69
Identity = 149/440 (33.86%), Postives = 235/440 (53.41%), Query Frame = 1

Query: 99  ISQTHSYGTVDFERRPMVKW--NAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFR 158
           ++  H   + D  +R   K+    +Y R+      E+     LNQ+    K + KWE+  
Sbjct: 1   MAMRHLSRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGD 60

Query: 159 VIKELRKYRRYERALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPK 218
            IK+LR    Y  AL++ + M  RG     T SD AI LDL++K   I + E+YFV LP+
Sbjct: 61  TIKKLRNRGLYYPALKLSEVMEERG--MNKTVSDQAIHLDLVAKAREITAGENYFVDLPE 120

Query: 219 NLKDRRTYGALLNAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVE 278
             K   TYG+LLN Y K    EKAE LL KM+       ++S+N +MTLY    E EKV 
Sbjct: 121 TSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVP 180

Query: 279 SLVSEMIEKGIRLDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATM 338
           +++ E+  + +  D Y+YN+W+ +      I  +E V E M +D  +  +WTT+S MA++
Sbjct: 181 AMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASI 240

Query: 339 YIKTGLIEKAEECLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIP 398
           Y+  GL +KAE+ L+ +E +   RD   + +L++LYG +G   E YR+W+  +   P   
Sbjct: 241 YVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTS 300

Query: 399 NLGFHAIISALIRAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFN 458
           N+ +  +I  L++  D+ GAE +++EW +  + YD RI N+ +G Y +EG+  KA     
Sbjct: 301 NVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKE 360

Query: 459 HMVEAGGKPNSSSWEILADGLSKEGRVSDALASWKEAFS---AEGSRTWRPKHFKVLAFF 518
                GGK N+ +WEI  D   K G ++ AL    +A S    +G + W P    V A  
Sbjct: 361 KAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGK-WLPSPETVRALM 420

Query: 519 NLCEKEGDIASKEVLVGLLR 534
           +  E++ D+   E L+ +L+
Sbjct: 421 SYFEQKKDVNGAENLLEILK 437

BLAST of CmaCh06G011610 vs. Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-68
Identity = 145/422 (34.36%), Postives = 234/422 (55.45%), Query Frame = 1

Query: 114 PMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYERALEI 173
           P+  ++ + RR++   +P      VL+ W ++G  +   E+  +IK LRK+ R+  AL+I
Sbjct: 33  PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92

Query: 174 YDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLNAYVK 233
            DWMS      +++  D AI+LDLI+KV G+  AE +F  +P   ++   YGALLN Y  
Sbjct: 93  SDWMSEH-RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152

Query: 234 ARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRLDIYS 293
            +   KAE +  +M+  G+    L +NVM+ LYV   +Y  VE L+ EM ++ ++ DI++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 212

Query: 294 YNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEECLRRV 353
            N  + +  +   +E ME+   R + D+ ++ +W T++  A  YIK GL EKA E LR+ 
Sbjct: 213 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 272

Query: 354 ESRIVGRDR-IPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIRAGD 413
           E  +  + R   +  LMS YG+ G KEE YR+W +YK +     N G+ ++ISAL++  D
Sbjct: 273 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 332

Query: 414 IEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSSWEI 473
           IE  EKI EEW +  + +D RI +L +  Y K+GM  KAE   N +V+     ++S+WE 
Sbjct: 333 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 392

Query: 474 LADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLVGLL 533
           LA G    G++  A+  WK A        WRP    +++  +  E + D+     ++ LL
Sbjct: 393 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 451

Query: 534 RQ 535
            +
Sbjct: 453 SE 451

BLAST of CmaCh06G011610 vs. Swiss-Prot
Match: PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana GN=At1g02370 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.6e-63
Identity = 147/430 (34.19%), Postives = 228/430 (53.02%), Query Frame = 1

Query: 121 IYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYERALEIYDWMSNR 180
           +Y+++S++       A  LNQ+  EG  + K ++FR  K LRK+RR + A EI+DWM  R
Sbjct: 73  LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR 132

Query: 181 GETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRR-TYGALLNAYVKARQREK 240
             TF +  SD AI LDLI K  G+ +AE+YF  L  + K+ + TYGAL+N Y    + EK
Sbjct: 133 KMTFSV--SDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEK 192

Query: 241 AETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRLDIYSYNIWIS 300
           A+     M    +  ++L FN MM++Y+   + EKV  LV  M ++GI     +Y+IW+ 
Sbjct: 193 AKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQ 252

Query: 301 SRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEECLRRVESRIVG 360
           S G    ++ +E++ + M +D      W TFS +A +Y K GL EKA+  L+ +E ++  
Sbjct: 253 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNP 312

Query: 361 RDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIRAGDIEGAEKI 420
            +R   H+LMSLY  +    E YRVW+  K   P + NL +  ++ A+ + GD++G +KI
Sbjct: 313 NNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKI 372

Query: 421 YEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSSWEILADGLSK 480
           + EW S   AYD R+AN+ +  Y+K  M  +AE   +  ++    P S + ++L   L +
Sbjct: 373 FTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLE 432

Query: 481 EGRVSDALASWKEAF--SAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLVGLLRQSKC 540
             +   A+   + A   SAE    W      V  FF   EK  D+   E    +L   K 
Sbjct: 433 NDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKP 492

Query: 541 LQDKAYVSLI 548
           L  +    LI
Sbjct: 493 LDSETMTFLI 500

BLAST of CmaCh06G011610 vs. Swiss-Prot
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.6e-63
Identity = 134/433 (30.95%), Postives = 230/433 (53.12%), Query Frame = 1

Query: 116 VKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYERALEIYD 175
           VK   +Y +IS + +P+      L  W   GKK++  E+ R++ +LR+ +R+  ALE+  
Sbjct: 22  VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSK 81

Query: 176 WMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLNAYVKAR 235
           WM+  G     + ++ A+ LDLI +VYG  +AE+YF  L +  K+ +TYGALLN YV+ +
Sbjct: 82  WMNETGVCV-FSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQ 141

Query: 236 QREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRLDIYSYN 295
             EK+     KM+  G+   +L++N +M LY N  ++EKV  ++ EM E+ +  D YSY 
Sbjct: 142 NVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYR 201

Query: 296 IWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEECLRRVES 355
           I I++ G    +E++      M++ + I  +W T++  A  YI  G  ++A E L+  E+
Sbjct: 202 ICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSEN 261

Query: 356 RIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIRAGDIEG 415
           R+  +D   +++L++LY  +G K E  R+W + K +     N  +  ++ +L++   +  
Sbjct: 262 RLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVE 321

Query: 416 AEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSSWEILAD 475
           AE++  EW S    YD R+ N  +  Y+ + M  KAE+    +   G      SWE++A 
Sbjct: 322 AEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVAT 381

Query: 476 GLSKEGRVSDALASWKEAFSAE-GSRTWRPKHFKVLAFFNLCEKEGDIASKEVLVGLLRQ 535
             +++G + +A    K A   E GSR WRP    V +  +    EG +   E  V  LR 
Sbjct: 382 AYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRN 441

Query: 536 SKCLQDKAYVSLI 548
              +  + Y +L+
Sbjct: 442 CIGVNKQMYHALV 453

BLAST of CmaCh06G011610 vs. TrEMBL
Match: A0A0A0L6I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127020 PE=4 SV=1)

HSP 1 Score: 886.7 bits (2290), Expect = 1.5e-254
Identity = 440/537 (81.94%), Postives = 479/537 (89.20%), Query Frame = 1

Query: 50  MLLQTSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTVD 109
           MLLQTSVHH  VSL S  SYS K  P+IQSQ FF NVNYRRLPLS+TCSISQ HSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60

Query: 110 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYER 169
           FERRPM KWNAIYRRISLMENPELGSASVLNQWENEGK ITKWE+ RV+KELRKY+R+ER
Sbjct: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120

Query: 170 ALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLN 229
           ALEIYDWMSNR E F+LT SDAAIQLDLISKV GI SAE+YF+RLP +LKDRR YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180

Query: 230 AYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRL 289
           AY K RQREKAE LL KMRTKG+  H L FNVMMTLY+N KEYEKVESLVSEM E  I+L
Sbjct: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240

Query: 290 DIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEEC 349
           DIYSYNIW+SS GLQGS EKMEEVYE+MKQDRTINANWTTFSTMATMYIK GL+EKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300

Query: 350 LRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIR 409
           LRRVESRIVGRDRIP+HYL+SLYGSVGNKEE YRVW +YK +FPTIPNLG+HAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 410 AGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSS 469
            GD+EGAEKIYEEWL+VK+ YDPRIANLF+GWYVKEG +SKAESFF+HMVE GGKPNSS+
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420

Query: 470 WEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLV 529
           WEIL D  +KEGRVSDALASWKEAFSAEGS++WRPK + VLA+F+LCEKEGDIASKEVLV
Sbjct: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 530 GLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLLEM 587
           GLLRQ K LQDK Y SLIGL DETIDN+ VS +GSNI+DE DKT YESDDSEM L++
Sbjct: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 537

BLAST of CmaCh06G011610 vs. TrEMBL
Match: A0A061DUM9_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_005749 PE=4 SV=1)

HSP 1 Score: 746.1 bits (1925), Expect = 3.2e-212
Identity = 365/534 (68.35%), Postives = 448/534 (83.90%), Query Frame = 1

Query: 50  MLLQ-TSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTV 109
           MLLQ +S+ ++ VSLSS++SYS +LP  +      +  +Y++LP  +TCSISQ HSYGTV
Sbjct: 1   MLLQPSSLLNHRVSLSSTSSYSRQLPCQVPQLILSQTQSYQKLP--VTCSISQIHSYGTV 60

Query: 110 DFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYE 169
           D+ERRPM+KWNAIY++ISLMENPELGSASVLN+WE  G+K+TKWE+ RV+KELRKY+RY+
Sbjct: 61  DYERRPMIKWNAIYKKISLMENPELGSASVLNEWEKGGRKLTKWELCRVVKELRKYKRYK 120

Query: 170 RALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALL 229
           +ALE+YDWM+NRGE F+L+ASDAAIQLDLI+KV G++SAED+FV+LP  +KD+R YGALL
Sbjct: 121 QALEVYDWMNNRGERFRLSASDAAIQLDLIAKVRGVSSAEDFFVQLPDTMKDKRIYGALL 180

Query: 230 NAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIR 289
           NAYV+A+ R+KAETL+  MR KGYA+H L FNVMMTLY+N KEY+KVES+VSEM+EK IR
Sbjct: 181 NAYVRAKMRDKAETLIDNMRGKGYAMHPLPFNVMMTLYMNLKEYDKVESMVSEMMEKNIR 240

Query: 290 LDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEE 349
           LDIYSYNIW+SS G QGS+EKMEEVYE+MKQD++IN NWTTFSTMATMYIK GL EKAEE
Sbjct: 241 LDIYSYNIWLSSCGSQGSVEKMEEVYEQMKQDQSINPNWTTFSTMATMYIKMGLTEKAEE 300

Query: 350 CLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALI 409
           CLR VESRI GRDRIP+HYL+SLYG VGN+EE YRVWKVYK+IFP+IPNLGFHA+IS+L+
Sbjct: 301 CLRNVESRITGRDRIPYHYLISLYGGVGNREEVYRVWKVYKSIFPSIPNLGFHAVISSLV 360

Query: 410 RAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSS 469
           RAGDI+GAE+IYEEWL+VKT+YDPRIANL MGWYVKEG   KAES F+H+ E GGKPNSS
Sbjct: 361 RAGDIQGAERIYEEWLTVKTSYDPRIANLLMGWYVKEGNLDKAESLFSHIAEVGGKPNSS 420

Query: 470 SWEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVL 529
           SWEILA+G   E R+ DAL+  K+AF+ EGSR WRPK   V AFFNLCE++ D+AS+EV 
Sbjct: 421 SWEILAEGHILEKRIPDALSCLKDAFATEGSRGWRPKPTSVSAFFNLCEEKVDMASREVF 480

Query: 530 VGLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEM 583
           VGLLRQS CL+++AY SLIGLS+E +    +  + +     S     + D SE+
Sbjct: 481 VGLLRQSGCLKNEAYASLIGLSEEALSESELPRDKNRKSSYSSSDENQDDGSEV 532

BLAST of CmaCh06G011610 vs. TrEMBL
Match: A0A0B0NQQ4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_17735 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 2.0e-206
Identity = 360/536 (67.16%), Postives = 449/536 (83.77%), Query Frame = 1

Query: 50  MLLQ-TSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTV 109
           MLLQ +S+ ++ VS+SS+ SYS +LP  I      R  ++++LP  ITCSISQ HSYGTV
Sbjct: 1   MLLQPSSLLNHRVSISSADSYSRQLPCRIPKFILSRTPSFQKLP--ITCSISQVHSYGTV 60

Query: 110 DFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYE 169
           DFERRPMVKWNA+Y++ISLMENPELGSASVLN+WE  G+K+TKWE+ RV+KELRKY+R++
Sbjct: 61  DFERRPMVKWNALYKKISLMENPELGSASVLNEWEKGGRKLTKWELCRVVKELRKYKRFK 120

Query: 170 RALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALL 229
           +ALE+Y+WM+NRGE F+ +ASDAAIQLDLISKV G++SAED+F++LP  LKD+R YGALL
Sbjct: 121 QALEVYEWMNNRGERFRFSASDAAIQLDLISKVRGVSSAEDFFLQLPDTLKDKRIYGALL 180

Query: 230 NAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIR 289
           NAYV+AR +EKAE+L+  MR KGYA+H L FNVMMTLY+N KEY+KVES++SEM+EK +R
Sbjct: 181 NAYVRARMQEKAESLIDNMRNKGYALHPLPFNVMMTLYMNLKEYDKVESMISEMMEKNVR 240

Query: 290 LDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEE 349
           LDIYSYNIW+SS G QG +E+ME+VYE+MK+DR+IN NWTTFSTMATMYIK GL EKAEE
Sbjct: 241 LDIYSYNIWLSSCGSQGYVERMEQVYEQMKEDRSINPNWTTFSTMATMYIKMGLSEKAEE 300

Query: 350 CLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALI 409
           CLR VESRI GRDRIP+HYL++LYG+VGNKEE YR+WKVYK+IFP+IPNLG+HA+IS+L+
Sbjct: 301 CLRNVESRITGRDRIPYHYLITLYGTVGNKEEVYRIWKVYKSIFPSIPNLGYHAMISSLV 360

Query: 410 RAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSS 469
           RA DIEGAEKIYEEWLSVKT+YDPRIANL MG YVKEG   KA+SFFNH+ + GGKPNSS
Sbjct: 361 RASDIEGAEKIYEEWLSVKTSYDPRIANLLMGLYVKEGNLDKAQSFFNHIADVGGKPNSS 420

Query: 470 SWEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVL 529
           SWEILA+G  +E R+ +AL+  KEAF+ EGSR+WRPK   V AFFNLC+++ D  ++EV+
Sbjct: 421 SWEILAEGNIQEERIDEALSCLKEAFATEGSRSWRPKPTNVSAFFNLCDEKEDTETREVV 480

Query: 530 VGLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLL 585
           VGLLRQS  L+++AY S IGLSD  +++  V    S+ D+  D      DDSE+LL
Sbjct: 481 VGLLRQSGYLKNEAYASQIGLSDGAVES--VLPTYSSGDENQD------DDSEVLL 526

BLAST of CmaCh06G011610 vs. TrEMBL
Match: M5XM86_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003822mg PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 7.6e-206
Identity = 351/539 (65.12%), Postives = 449/539 (83.30%), Query Frame = 1

Query: 50  MLLQTSVHHY--NVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGT 109
           M LQTSVHH+  N+ LSSS SYS  LP  I +     ++N++RLP SI+CSISQ H+YGT
Sbjct: 1   MPLQTSVHHHHHNLPLSSSLSYSTLLPCKIPTLPLPSSINFQRLP-SISCSISQVHNYGT 60

Query: 110 VDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRY 169
           VD+ERRPMVKWNAIYR+ISL ++PE+ SA VLNQWE EG+K+TKWE+ RV+KELRKY+RY
Sbjct: 61  VDYERRPMVKWNAIYRKISLTDDPEVRSADVLNQWEKEGRKLTKWELCRVVKELRKYKRY 120

Query: 170 ERALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGAL 229
           +RALE+YDWMSNRGE F+++ SDAAIQLDL++KV G+ASAE+YF+ LP  LKDRR YGAL
Sbjct: 121 DRALEVYDWMSNRGERFRISTSDAAIQLDLVAKVRGVASAENYFLSLPDTLKDRRIYGAL 180

Query: 230 LNAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGI 289
           LNAYV+ R +EKAE+LL KMR+KG+A+ +L FNVMMTLY+N KEY+KV+S++SEM+EK I
Sbjct: 181 LNAYVRTRMKEKAESLLDKMRSKGHALQSLPFNVMMTLYMNLKEYDKVDSIISEMMEKNI 240

Query: 290 RLDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAE 349
           +LDIYSYNIW+SSRG QGS E+ME+V+E+MK DRT+N NWTTFSTMATMYIK G +EKAE
Sbjct: 241 QLDIYSYNIWLSSRGSQGSEERMEQVFEQMKLDRTVNPNWTTFSTMATMYIKMGQLEKAE 300

Query: 350 ECLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISAL 409
            CL++VESRI GRDRIP+HYL+SLYG+VGNKEE YRVW +YK+ FP+IPNLG+HAI+S+L
Sbjct: 301 ACLKKVESRITGRDRIPYHYLLSLYGNVGNKEELYRVWNIYKSSFPSIPNLGYHAIMSSL 360

Query: 410 IRAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNS 469
           +R GD+EGAEKIYEEWL+VK+ YDPRIAN+F+ +Y+K+G   KA+SF++HMV+ GGKPNS
Sbjct: 361 LRVGDVEGAEKIYEEWLTVKSTYDPRIANVFIAYYIKDGDFEKAQSFYDHMVDVGGKPNS 420

Query: 470 SSWEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEV 529
           ++WE LA+G  +E R+S+AL+ WKEAFSAEGS++WRPK   V AF  LCE+E +  SKE 
Sbjct: 421 TTWETLAEGHIEEQRISEALSCWKEAFSAEGSKSWRPKPVNVSAFLELCEQEANSVSKEF 480

Query: 530 LVGLLRQSKCLQDKAYVSLIGLSDETIDNDVVS--GEGSNIDDESDKTVYESDDSEMLL 585
            +GLL+QS  L++K+Y SLIGL+DE + +D +S   + +NI  + D      D SE+LL
Sbjct: 481 FMGLLKQSGQLKNKSYASLIGLADEDVSDDDLSLKKDRTNITKDDDDEKEAGDGSELLL 538

BLAST of CmaCh06G011610 vs. TrEMBL
Match: A0A0D2MUP8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G069400 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 5.0e-205
Identity = 358/536 (66.79%), Postives = 447/536 (83.40%), Query Frame = 1

Query: 50  MLLQ-TSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTV 109
           MLLQ +S+ ++  S+SS+ SYS +LP  I      R  ++++LP  + CSISQ HSYGTV
Sbjct: 1   MLLQPSSLLNHRFSISSADSYSRQLPCRIPKFILSRTPSFQKLP--VMCSISQVHSYGTV 60

Query: 110 DFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYE 169
           DFERRPMVKWNA+Y++ISLMENPELGSASVLN+WE  G+K+TKWE+ RV+KELRKY+R++
Sbjct: 61  DFERRPMVKWNALYKKISLMENPELGSASVLNEWEKGGRKLTKWELCRVVKELRKYKRFK 120

Query: 170 RALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALL 229
           +ALE+Y+WM+NRGE F+ +ASDAAIQLDLISKV G++SAED+F++L   LKD+R YGALL
Sbjct: 121 QALEVYEWMNNRGERFRFSASDAAIQLDLISKVRGVSSAEDFFLQLSDTLKDKRIYGALL 180

Query: 230 NAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIR 289
           NAYV+AR +EKAE+L+  MR KGYA+H L FNVMMTLY+N KEY+KVES++SEM+EK IR
Sbjct: 181 NAYVRARMQEKAESLIDNMRNKGYALHPLPFNVMMTLYMNLKEYDKVESMISEMMEKNIR 240

Query: 290 LDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEE 349
           LDIYSYNIW+SS G QGS+E+ME+VYE+MK+DR+IN NWTTFSTMATMYIK GL EKAEE
Sbjct: 241 LDIYSYNIWLSSCGSQGSVERMEQVYEQMKEDRSINPNWTTFSTMATMYIKMGLSEKAEE 300

Query: 350 CLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALI 409
           CLR VESRI GRDRIP+HYL++LYG+VGNKEE YR+WKVYK+IFP+IPNLG+HA+IS+L+
Sbjct: 301 CLRNVESRITGRDRIPYHYLITLYGTVGNKEEVYRIWKVYKSIFPSIPNLGYHAMISSLV 360

Query: 410 RAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSS 469
           RA DIEGAEKIYEEWLSVKT+YDPRIANL MG YVKEG   KA+SFFNH+ + GGKPNSS
Sbjct: 361 RASDIEGAEKIYEEWLSVKTSYDPRIANLLMGLYVKEGNLGKAQSFFNHIADVGGKPNSS 420

Query: 470 SWEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVL 529
           SWEILA+G  +E R+ +AL+  KEAF+ EGSR+WRPK   V AFFNLC+++ D  S+EV+
Sbjct: 421 SWEILAEGNIQEERIDEALSCLKEAFATEGSRSWRPKPTNVSAFFNLCDEKEDTESREVV 480

Query: 530 VGLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLL 585
           VGLL+QS  L+++AY S IGLSD  +++  V    S+ D+  D      DDSE+LL
Sbjct: 481 VGLLQQSGYLKNEAYASQIGLSDSAVES--VLPTYSSGDENQD------DDSEVLL 526

BLAST of CmaCh06G011610 vs. TAIR10
Match: AT1G02150.1 (AT1G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 645.2 bits (1663), Expect = 3.9e-185
Identity = 317/514 (61.67%), Postives = 403/514 (78.40%), Query Frame = 1

Query: 50  MLLQTSVHHYNVSLSSSTSYSHKL---PPVIQSQAFFRNVNYRRLPLSITCSISQTHSYG 109
           MLLQ +V + NV L+SS SYS  L    PV+   A  +         +I CSISQ + YG
Sbjct: 1   MLLQAAVQNRNVPLASSASYSRLLRCRSPVVSVAALSKKT------AAIVCSISQVYGYG 60

Query: 110 TVDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRR 169
           TVD+ERRP+V+WNAIY++ISLME PELG+ASVLNQWE  G+K+TKWE+ RV+KELRKY+R
Sbjct: 61  TVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKR 120

Query: 170 YERALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGA 229
             +ALE+YDWM+NRGE F+L+ASDAAIQLDLI KV GI  AE++F++LP+N KDRR YG+
Sbjct: 121 ANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGS 180

Query: 230 LLNAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKG 289
           LLNAYV+A+ REKAE LL  MR KGYA+H L FNVMMTLY+N +EY+KV+++V EM +K 
Sbjct: 181 LLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKD 240

Query: 290 IRLDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKA 349
           IRLDIYSYNIW+SS G  GS+EKME VY++MK D +I  NWTTFSTMATMYIK G  EKA
Sbjct: 241 IRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKA 300

Query: 350 EECLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISA 409
           E+ LR+VE+RI GR+RIP+HYL+SLYGS+GNK+E YRVW VYK++ P+IPNLG+HA++S+
Sbjct: 301 EDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSS 360

Query: 410 LIRAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPN 469
           L+R GDIEGAEK+YEEWL VK++YDPRI NL M  YVK      AE  F+HMVE GGKP+
Sbjct: 361 LVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPS 420

Query: 470 SSSWEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKE 529
           SS+WEILA G +++  +S+AL   + AFSAEGS  WRPK   +  FF LCE+E D+ SKE
Sbjct: 421 SSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKE 480

Query: 530 VLVGLLRQSKCLQDKAYVSLIGLSD-ETIDNDVV 560
            ++ LLRQS  L+DK+Y++LI + +  T++N  +
Sbjct: 481 AVLELLRQSGDLEDKSYLALIDVDENRTVNNSEI 508

BLAST of CmaCh06G011610 vs. TAIR10
Match: AT1G60770.1 (AT1G60770.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 262.7 bits (670), Expect = 5.4e-70
Identity = 149/440 (33.86%), Postives = 235/440 (53.41%), Query Frame = 1

Query: 99  ISQTHSYGTVDFERRPMVKW--NAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFR 158
           ++  H   + D  +R   K+    +Y R+      E+     LNQ+    K + KWE+  
Sbjct: 1   MAMRHLSRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGD 60

Query: 159 VIKELRKYRRYERALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPK 218
            IK+LR    Y  AL++ + M  RG     T SD AI LDL++K   I + E+YFV LP+
Sbjct: 61  TIKKLRNRGLYYPALKLSEVMEERG--MNKTVSDQAIHLDLVAKAREITAGENYFVDLPE 120

Query: 219 NLKDRRTYGALLNAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVE 278
             K   TYG+LLN Y K    EKAE LL KM+       ++S+N +MTLY    E EKV 
Sbjct: 121 TSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVP 180

Query: 279 SLVSEMIEKGIRLDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATM 338
           +++ E+  + +  D Y+YN+W+ +      I  +E V E M +D  +  +WTT+S MA++
Sbjct: 181 AMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASI 240

Query: 339 YIKTGLIEKAEECLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIP 398
           Y+  GL +KAE+ L+ +E +   RD   + +L++LYG +G   E YR+W+  +   P   
Sbjct: 241 YVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTS 300

Query: 399 NLGFHAIISALIRAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFN 458
           N+ +  +I  L++  D+ GAE +++EW +  + YD RI N+ +G Y +EG+  KA     
Sbjct: 301 NVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKE 360

Query: 459 HMVEAGGKPNSSSWEILADGLSKEGRVSDALASWKEAFS---AEGSRTWRPKHFKVLAFF 518
                GGK N+ +WEI  D   K G ++ AL    +A S    +G + W P    V A  
Sbjct: 361 KAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGK-WLPSPETVRALM 420

Query: 519 NLCEKEGDIASKEVLVGLLR 534
           +  E++ D+   E L+ +L+
Sbjct: 421 SYFEQKKDVNGAENLLEILK 437

BLAST of CmaCh06G011610 vs. TAIR10
Match: AT2G20710.1 (AT2G20710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-69
Identity = 145/422 (34.36%), Postives = 234/422 (55.45%), Query Frame = 1

Query: 114 PMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYERALEI 173
           P+  ++ + RR++   +P      VL+ W ++G  +   E+  +IK LRK+ R+  AL+I
Sbjct: 33  PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92

Query: 174 YDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLNAYVK 233
            DWMS      +++  D AI+LDLI+KV G+  AE +F  +P   ++   YGALLN Y  
Sbjct: 93  SDWMSEH-RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152

Query: 234 ARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRLDIYS 293
            +   KAE +  +M+  G+    L +NVM+ LYV   +Y  VE L+ EM ++ ++ DI++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 212

Query: 294 YNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEECLRRV 353
            N  + +  +   +E ME+   R + D+ ++ +W T++  A  YIK GL EKA E LR+ 
Sbjct: 213 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 272

Query: 354 ESRIVGRDR-IPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIRAGD 413
           E  +  + R   +  LMS YG+ G KEE YR+W +YK +     N G+ ++ISAL++  D
Sbjct: 273 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 332

Query: 414 IEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSSWEI 473
           IE  EKI EEW +  + +D RI +L +  Y K+GM  KAE   N +V+     ++S+WE 
Sbjct: 333 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 392

Query: 474 LADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLVGLL 533
           LA G    G++  A+  WK A        WRP    +++  +  E + D+     ++ LL
Sbjct: 393 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 451

Query: 534 RQ 535
            +
Sbjct: 453 SE 451

BLAST of CmaCh06G011610 vs. TAIR10
Match: AT1G02370.1 (AT1G02370.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 245.4 bits (625), Expect = 9.0e-65
Identity = 147/430 (34.19%), Postives = 228/430 (53.02%), Query Frame = 1

Query: 121 IYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYERALEIYDWMSNR 180
           +Y+++S++       A  LNQ+  EG  + K ++FR  K LRK+RR + A EI+DWM  R
Sbjct: 73  LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR 132

Query: 181 GETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRR-TYGALLNAYVKARQREK 240
             TF +  SD AI LDLI K  G+ +AE+YF  L  + K+ + TYGAL+N Y    + EK
Sbjct: 133 KMTFSV--SDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEK 192

Query: 241 AETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRLDIYSYNIWIS 300
           A+     M    +  ++L FN MM++Y+   + EKV  LV  M ++GI     +Y+IW+ 
Sbjct: 193 AKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQ 252

Query: 301 SRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEECLRRVESRIVG 360
           S G    ++ +E++ + M +D      W TFS +A +Y K GL EKA+  L+ +E ++  
Sbjct: 253 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNP 312

Query: 361 RDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIRAGDIEGAEKI 420
            +R   H+LMSLY  +    E YRVW+  K   P + NL +  ++ A+ + GD++G +KI
Sbjct: 313 NNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKI 372

Query: 421 YEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSSWEILADGLSK 480
           + EW S   AYD R+AN+ +  Y+K  M  +AE   +  ++    P S + ++L   L +
Sbjct: 373 FTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLE 432

Query: 481 EGRVSDALASWKEAF--SAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLVGLLRQSKC 540
             +   A+   + A   SAE    W      V  FF   EK  D+   E    +L   K 
Sbjct: 433 NDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKP 492

Query: 541 LQDKAYVSLI 548
           L  +    LI
Sbjct: 493 LDSETMTFLI 500

BLAST of CmaCh06G011610 vs. TAIR10
Match: AT4G21705.1 (AT4G21705.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 243.8 bits (621), Expect = 2.6e-64
Identity = 134/433 (30.95%), Postives = 230/433 (53.12%), Query Frame = 1

Query: 116 VKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYERALEIYD 175
           VK   +Y +IS + +P+      L  W   GKK++  E+ R++ +LR+ +R+  ALE+  
Sbjct: 22  VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSK 81

Query: 176 WMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLNAYVKAR 235
           WM+  G     + ++ A+ LDLI +VYG  +AE+YF  L +  K+ +TYGALLN YV+ +
Sbjct: 82  WMNETGVCV-FSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQ 141

Query: 236 QREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRLDIYSYN 295
             EK+     KM+  G+   +L++N +M LY N  ++EKV  ++ EM E+ +  D YSY 
Sbjct: 142 NVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYR 201

Query: 296 IWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEECLRRVES 355
           I I++ G    +E++      M++ + I  +W T++  A  YI  G  ++A E L+  E+
Sbjct: 202 ICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSEN 261

Query: 356 RIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIRAGDIEG 415
           R+  +D   +++L++LY  +G K E  R+W + K +     N  +  ++ +L++   +  
Sbjct: 262 RLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVE 321

Query: 416 AEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSSWEILAD 475
           AE++  EW S    YD R+ N  +  Y+ + M  KAE+    +   G      SWE++A 
Sbjct: 322 AEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVAT 381

Query: 476 GLSKEGRVSDALASWKEAFSAE-GSRTWRPKHFKVLAFFNLCEKEGDIASKEVLVGLLRQ 535
             +++G + +A    K A   E GSR WRP    V +  +    EG +   E  V  LR 
Sbjct: 382 AYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRN 441

Query: 536 SKCLQDKAYVSLI 548
              +  + Y +L+
Sbjct: 442 CIGVNKQMYHALV 453

BLAST of CmaCh06G011610 vs. NCBI nr
Match: gi|659075585|ref|XP_008438222.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis melo])

HSP 1 Score: 892.5 bits (2305), Expect = 4.0e-256
Identity = 443/537 (82.50%), Postives = 482/537 (89.76%), Query Frame = 1

Query: 50  MLLQTSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTVD 109
           MLLQTSVHH  VSL SS SYS K  P IQSQ FF NVNYRRL LS+TCSISQ HSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 110 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYER 169
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGK +TKWE+ RV+KELRKY+R+ER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 170 ALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLN 229
           ALEIYDWMSNR E F+LT SDAAIQLDLISKV GI SAEDYF+RLP NLKDRR YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 230 AYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRL 289
           AY KARQREKAE LLAKMRTKGYA H L FNVMMTLY+N KEYEKV+SLVSEM EK I+L
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 290 DIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEEC 349
           DIYSYNIW+SS GLQGS +KMEEVYE+MKQD+TINANWTTFSTMATMYIK GLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 350 LRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIR 409
           LR+VESRIVGRDRIP+HYL+SLYGSVGNKEE YRVW +YK +FPTIPNLG+HAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 410 AGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSS 469
            GD+EGAEKIYEEWL+VK  YDPRIANLF+GWYVKE   SKAE FF+HMVE GGKPNSS+
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 470 WEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLV 529
           WEILADG +KEGRVSDALASWKEAFS+EGS++WRPK + VLA+F+LCEKEGDIASKEVLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 530 GLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLLEM 587
           G LRQ K LQDK+Y SLIGL DETIDND VS +GS+I+DE DKT YESDDSEMLL++
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

BLAST of CmaCh06G011610 vs. NCBI nr
Match: gi|449432307|ref|XP_004133941.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis sativus])

HSP 1 Score: 886.7 bits (2290), Expect = 2.2e-254
Identity = 440/537 (81.94%), Postives = 479/537 (89.20%), Query Frame = 1

Query: 50  MLLQTSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTVD 109
           MLLQTSVHH  VSL S  SYS K  P+IQSQ FF NVNYRRLPLS+TCSISQ HSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60

Query: 110 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYER 169
           FERRPM KWNAIYRRISLMENPELGSASVLNQWENEGK ITKWE+ RV+KELRKY+R+ER
Sbjct: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120

Query: 170 ALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLN 229
           ALEIYDWMSNR E F+LT SDAAIQLDLISKV GI SAE+YF+RLP +LKDRR YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180

Query: 230 AYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRL 289
           AY K RQREKAE LL KMRTKG+  H L FNVMMTLY+N KEYEKVESLVSEM E  I+L
Sbjct: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240

Query: 290 DIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEEC 349
           DIYSYNIW+SS GLQGS EKMEEVYE+MKQDRTINANWTTFSTMATMYIK GL+EKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300

Query: 350 LRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIR 409
           LRRVESRIVGRDRIP+HYL+SLYGSVGNKEE YRVW +YK +FPTIPNLG+HAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 410 AGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSS 469
            GD+EGAEKIYEEWL+VK+ YDPRIANLF+GWYVKEG +SKAESFF+HMVE GGKPNSS+
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420

Query: 470 WEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLV 529
           WEIL D  +KEGRVSDALASWKEAFSAEGS++WRPK + VLA+F+LCEKEGDIASKEVLV
Sbjct: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 530 GLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLLEM 587
           GLLRQ K LQDK Y SLIGL DETIDN+ VS +GSNI+DE DKT YESDDSEM L++
Sbjct: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 537

BLAST of CmaCh06G011610 vs. NCBI nr
Match: gi|590724054|ref|XP_007052357.1| (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 746.1 bits (1925), Expect = 4.6e-212
Identity = 365/534 (68.35%), Postives = 448/534 (83.90%), Query Frame = 1

Query: 50  MLLQ-TSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTV 109
           MLLQ +S+ ++ VSLSS++SYS +LP  +      +  +Y++LP  +TCSISQ HSYGTV
Sbjct: 1   MLLQPSSLLNHRVSLSSTSSYSRQLPCQVPQLILSQTQSYQKLP--VTCSISQIHSYGTV 60

Query: 110 DFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYE 169
           D+ERRPM+KWNAIY++ISLMENPELGSASVLN+WE  G+K+TKWE+ RV+KELRKY+RY+
Sbjct: 61  DYERRPMIKWNAIYKKISLMENPELGSASVLNEWEKGGRKLTKWELCRVVKELRKYKRYK 120

Query: 170 RALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALL 229
           +ALE+YDWM+NRGE F+L+ASDAAIQLDLI+KV G++SAED+FV+LP  +KD+R YGALL
Sbjct: 121 QALEVYDWMNNRGERFRLSASDAAIQLDLIAKVRGVSSAEDFFVQLPDTMKDKRIYGALL 180

Query: 230 NAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIR 289
           NAYV+A+ R+KAETL+  MR KGYA+H L FNVMMTLY+N KEY+KVES+VSEM+EK IR
Sbjct: 181 NAYVRAKMRDKAETLIDNMRGKGYAMHPLPFNVMMTLYMNLKEYDKVESMVSEMMEKNIR 240

Query: 290 LDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEE 349
           LDIYSYNIW+SS G QGS+EKMEEVYE+MKQD++IN NWTTFSTMATMYIK GL EKAEE
Sbjct: 241 LDIYSYNIWLSSCGSQGSVEKMEEVYEQMKQDQSINPNWTTFSTMATMYIKMGLTEKAEE 300

Query: 350 CLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALI 409
           CLR VESRI GRDRIP+HYL+SLYG VGN+EE YRVWKVYK+IFP+IPNLGFHA+IS+L+
Sbjct: 301 CLRNVESRITGRDRIPYHYLISLYGGVGNREEVYRVWKVYKSIFPSIPNLGFHAVISSLV 360

Query: 410 RAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSS 469
           RAGDI+GAE+IYEEWL+VKT+YDPRIANL MGWYVKEG   KAES F+H+ E GGKPNSS
Sbjct: 361 RAGDIQGAERIYEEWLTVKTSYDPRIANLLMGWYVKEGNLDKAESLFSHIAEVGGKPNSS 420

Query: 470 SWEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVL 529
           SWEILA+G   E R+ DAL+  K+AF+ EGSR WRPK   V AFFNLCE++ D+AS+EV 
Sbjct: 421 SWEILAEGHILEKRIPDALSCLKDAFATEGSRGWRPKPTSVSAFFNLCEEKVDMASREVF 480

Query: 530 VGLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEM 583
           VGLLRQS CL+++AY SLIGLS+E +    +  + +     S     + D SE+
Sbjct: 481 VGLLRQSGCLKNEAYASLIGLSEEALSESELPRDKNRKSSYSSSDENQDDGSEV 532

BLAST of CmaCh06G011610 vs. NCBI nr
Match: gi|1009138398|ref|XP_015886567.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Ziziphus jujuba])

HSP 1 Score: 732.6 bits (1890), Expect = 5.3e-208
Identity = 357/539 (66.23%), Postives = 448/539 (83.12%), Query Frame = 1

Query: 50  MLLQTSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCS-ISQTHSYGTV 109
           MLLQ+S+HH+ V+LSSS S S  L   + +    +++NY RL  SITCS ISQ H+YGTV
Sbjct: 1   MLLQSSMHHHKVALSSSLSSSPPLAWKVPTFTLHQSINYNRL--SITCSSISQVHNYGTV 60

Query: 110 DFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYE 169
           D+ERRP++KWN IY+RISLMENPELGSA+VLNQWE EG+K+TKWE+ RV+KELRKY+RYE
Sbjct: 61  DYERRPLIKWNIIYKRISLMENPELGSATVLNQWEKEGRKLTKWELCRVVKELRKYKRYE 120

Query: 170 RALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALL 229
           RALE+Y+WM+NRGE F+L+ SDAAIQLDLI+KV G++SAE YF++LP +LKDRR YGALL
Sbjct: 121 RALEVYEWMNNRGERFRLSTSDAAIQLDLIAKVRGVSSAEGYFMKLPDSLKDRRIYGALL 180

Query: 230 NAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIR 289
           NAYV+A+ +EKAE+LL +MR+KG+A+H+L +NVMMTLY+N KEYEKV+ LVSEM+EK I+
Sbjct: 181 NAYVRAKMKEKAESLLDRMRSKGHALHSLPYNVMMTLYMNLKEYEKVDLLVSEMMEKNIK 240

Query: 290 LDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEE 349
           LDIYSYNIW+SSRG QGS EKMEEV+++MK DRTIN NWTTFST+ATMYIK   IEKAEE
Sbjct: 241 LDIYSYNIWLSSRGSQGSAEKMEEVFQQMKLDRTINPNWTTFSTLATMYIKMEQIEKAEE 300

Query: 350 CLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALI 409
           CL++VESRI GRDRIP+HYL+SLYGSVGNKEE YR+W VYK +FP IPNLG+HAII +L+
Sbjct: 301 CLKKVESRITGRDRIPYHYLLSLYGSVGNKEEIYRIWNVYKAVFPNIPNLGYHAIICSLL 360

Query: 410 RAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSS 469
           R GDIEGAEKIY+EWLSV+++YDPRIANLF+  YVKEG   KA+ FF+HM+E GGKPNSS
Sbjct: 361 RIGDIEGAEKIYDEWLSVRSSYDPRIANLFITCYVKEGNLEKAKGFFDHMIEVGGKPNSS 420

Query: 470 SWEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVL 529
           +WE LA+G + E    +AL+ WKEAF+ EGS++WRPK   V  F +LCE+E D+ASKEVL
Sbjct: 421 TWETLAEGHTAEKNTFEALSCWKEAFAEEGSKSWRPKPINVTLFLDLCEQEADLASKEVL 480

Query: 530 VGLLRQSKCLQDKAYVSLIGLSDETIDND---VVSGEGSNIDDESDKTVYESDDSEMLL 585
           VGLLRQ+  ++DK+Y SL+GLSDE  ++D    ++ E  N DD+ +    + D S ML+
Sbjct: 481 VGLLRQAGYIKDKSYASLVGLSDEANNDDNGNRMTSERGNPDDDEEDNENDEDGSGMLI 537

BLAST of CmaCh06G011610 vs. NCBI nr
Match: gi|645253007|ref|XP_008232381.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Prunus mume])

HSP 1 Score: 729.6 bits (1882), Expect = 4.5e-207
Identity = 353/539 (65.49%), Postives = 452/539 (83.86%), Query Frame = 1

Query: 50  MLLQTSVHH--YNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGT 109
           M LQTSVHH  +N+ LSSS SYS  LP  I +     ++N++RLP SI+CSISQ H+YGT
Sbjct: 1   MPLQTSVHHRHHNLPLSSSLSYSTILPCKIPTLPLPSSINFQRLP-SISCSISQVHNYGT 60

Query: 110 VDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRY 169
           VD+ERRPMVKWNAIYR+ISL ++PE+ SA VLNQWE EG+K+TKWE+ RV+KELRKY+RY
Sbjct: 61  VDYERRPMVKWNAIYRKISLTDDPEVRSADVLNQWEKEGRKLTKWELCRVVKELRKYKRY 120

Query: 170 ERALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGAL 229
           +RALE+YDWMSNRGE F+++ SDAAIQLDL++KV G+ASAE+YF+ LP  LKDRR YGAL
Sbjct: 121 DRALEVYDWMSNRGERFRISTSDAAIQLDLVAKVRGVASAENYFLSLPDTLKDRRIYGAL 180

Query: 230 LNAYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGI 289
           LNAYV+ R +EKAE+LL KMR+KG+A+ +L FNVMMTLY+N KEY+KV+S++SEM+EK I
Sbjct: 181 LNAYVRTRMKEKAESLLDKMRSKGHALQSLPFNVMMTLYMNLKEYDKVDSIISEMMEKNI 240

Query: 290 RLDIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAE 349
           +LDIYSYNIW+SSRG QGS E+ME+V+E+MK DRT+N NWTTFSTMATMYIK G +EKAE
Sbjct: 241 QLDIYSYNIWLSSRGSQGSEERMEQVFEQMKLDRTVNPNWTTFSTMATMYIKMGQLEKAE 300

Query: 350 ECLRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISAL 409
            CL++VESRI GRDRIP+HYL+SLYG+VGNKEE YRVW +YK+ FP+IPNLG+HAI+S+L
Sbjct: 301 ACLKKVESRITGRDRIPYHYLLSLYGNVGNKEELYRVWNIYKSSFPSIPNLGYHAIMSSL 360

Query: 410 IRAGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNS 469
           +R GD+EGAEKIYEEWL+VK+ YDPRIAN+F+ +Y+K+G   KA+SF++HMV+ GGKPNS
Sbjct: 361 LRVGDVEGAEKIYEEWLTVKSTYDPRIANVFIAYYIKDGDFEKAQSFYDHMVDVGGKPNS 420

Query: 470 SSWEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEV 529
           S+WE LA+G ++E R+S+AL+ WKEAFSAEGS++WRPK   V AF  LCE+E +  SKEV
Sbjct: 421 STWETLAEGHTEEQRISEALSCWKEAFSAEGSKSWRPKPVNVSAFLELCEQEANSVSKEV 480

Query: 530 LVGLLRQSKCLQDKAYVSLIGLSDETIDNDVVS--GEGSNIDDESDKTVYESDDSEMLL 585
            +GLL+QS  L++K+Y SLIGL+DE + +D +S   + +NI ++ D      D SE+LL
Sbjct: 481 FMGLLKQSGQLKNKSYASLIGLADEDVSDDDLSLKKDRTNITNDDDDEKEAGDGSELLL 538

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR3_ARATH6.9e-18461.67Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN... [more]
PPR86_ARATH9.6e-6933.86Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN... [more]
PP166_ARATH2.1e-6834.36Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
PPR4_ARATH1.6e-6334.19Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidop... [more]
PP334_ARATH4.6e-6330.95Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0L6I4_CUCSA1.5e-25481.94Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127020 PE=4 SV=1[more]
A0A061DUM9_THECC3.2e-21268.35Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma c... [more]
A0A0B0NQQ4_GOSAR2.0e-20667.16Uncharacterized protein OS=Gossypium arboreum GN=F383_17735 PE=4 SV=1[more]
M5XM86_PRUPE7.6e-20665.12Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003822mg PE=4 SV=1[more]
A0A0D2MUP8_GOSRA5.0e-20566.79Uncharacterized protein OS=Gossypium raimondii GN=B456_004G069400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G02150.13.9e-18561.67 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G60770.15.4e-7033.86 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G20710.11.2e-6934.36 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G02370.19.0e-6534.19 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G21705.12.6e-6430.95 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659075585|ref|XP_008438222.1|4.0e-25682.50PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis melo][more]
gi|449432307|ref|XP_004133941.1|2.2e-25481.94PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis sativu... [more]
gi|590724054|ref|XP_007052357.1|4.6e-21268.35Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 [Theobroma cac... [more]
gi|1009138398|ref|XP_015886567.1|5.3e-20866.23PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Ziziphus jujub... [more]
gi|645253007|ref|XP_008232381.1|4.5e-20765.49PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009451 RNA modification
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003729 mRNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G011610.1CmaCh06G011610.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 401..424
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 436..479
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 277..337
score: 1.3E-5coord: 223..268
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 436..466
score: 4.9E-5coord: 223..252
score: 1.9E-5coord: 292..320
score: 1.3E-4coord: 258..290
score: 5.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 466..501
score: 7.311coord: 326..356
score: 7.388coord: 255..289
score: 9.175coord: 431..465
score: 9.142coord: 220..254
score: 10.348coord: 396..426
score: 6.401coord: 290..320
score: 8.068coord: 150..184
score: 5
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 392..496
score: 3.6E-10coord: 280..356
score: 3.6E-10coord: 219..240
score: 3.6
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 208..425
score: 8.0
NoneNo IPR availableunknownCoilCoilcoord: 300..320
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 47..580
score: 1.5E
NoneNo IPR availablePANTHERPTHR24015:SF27SUBFAMILY NOT NAMEDcoord: 47..580
score: 1.5E

The following gene(s) are paralogous to this gene:

None