Cucsa.257170 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTTCAGACACTATTACGCGTTACCCGCTTTCTCTAGGTATTTCCTCTCACCCCTTTTCAGTTTTTCTCTCCTTTTTGTTCTTTTCATCCATTATTTTtCTTTTTtCTTTTGTTTATTTTTTtGTTTAATTTGCTAATGATCTTTGGTTTTGATTTTGTTTTTtGAACGTCTTTGTTTTAACCTCTTTTTTTCTCTCTTTTATCGCCATAGGACTTGGGATTCGTACTTATTTAAATTTTGACTTCCTTCTTAGATAAAGGGATTGATAGATCATCCTGAtCTTTTTTTTTtttAAATTTTGGCATCTATTCAATCGGTAGGTTCTTTGGATGTAGGAAGATGGGAAATCATGGAAGGTGGTGTCTTTAGATTGTTCAAGATATGGGGTTAGATCTAATTAAAAGTTAGTGTTTAATTGGAATTAGGTGGCGGTAGTTTTATAGAGTTCTTGAATTAATTCTTCTGGTGTATTGTGTTCTCTTGATATTGGACAATCATTCTGTTGGAAACTGGAATCATCATACCTTCGCTCTGTCGTAATTAATCTGGGAATTTAGCTGCGGTGGTATGATTTTTCTTGATATATGCTTAAAATAGCAAGTGTATTTATTTCACCATATGGTTAATATATGTGCCTAAATGTTTGGGGAACATCAGCTTTTTCCGACGACAACAAGAAACCTTTGAATTTGGCTGATTCTAGTGTCTCTTCCTGCTTGGGGGGCGTATTTTTATATGCTGTTCCACTGTAGAGATGGGGTATATTTTTAATGTAGCGGACTCTACAAACTATTAGTGGATATAACATAATCTATTTAAACCTGTGACTAAAACACCAATCAATTTCATTATTTTAATGCAGGGTCGTTATGGTTGTCTGACTAGATTATGTAAGTTTCAGATTGTTTTTGACATGGCTTGGAAAAATACAGAGAATCATACGTGTAGGTCTCGAGGGATATGTATTGTCACGATAAGGTTTAGAAACTATATTTGGATTAAGGTTTTTTAGTCTTATTTTATCATGTTATCATGACAAAAATAGGCATGCCATTATTTTCTTCTTGGTTAGATGGGAATAAATGGAGTATTGAGTTAGTTAATAAGCTGGTTGGTTGTGTTTTTCTCTCACTCTGTTATTCGTTGCAGTTGTTTCTTTTATCTATTCTGCCTTATGCTTCCTCTACATTATAGTCCCTAAAAGAGTTCGAGATGATCAAAGTTCATGTTCCATATAAGTGATCCAGGGATTTTTCTGCATTCAATTTAGGAAATGAGATTAGAGTGCACAATCTTACTTGAACAGGATTTGTTCTATAGATTGGACATCTATGTCCTTAAGTTCTAAGGAAATTAGATTAGAGTGTATTAGAACATTCAGCTTAGTTTAAACTTTCTATGGTCAAGGTTCATACCTCCTTTTATTGTCCTTCAGTAACTTTTTTGATCGGTTTGGTTTTTGTACTCTGGTTGAGTCAGGTTGCTGTTAGAATAATGATTCTTCACTTTTATCAAGTCTTGGCTGAGATGTAAACAATGATGAGTGCAACATAGGATAGAGTACCTTCCTAGTTTAATGGGTATTCTACTTAAATCGGCTGTTCTTAATTAACTATTATATTATGCTTAAGTTTTTCCATGCAAAATCTGCACTAAATTTGAATGGATATCTAAACATCATTCACTTGTTTTGTTAACTGCAATCAAATTATGCATTCCTTTCCTCCCATTTTATTGGCCTTGTGTGCCTGTCTATATGTGGTGCAAAAGACTCTACATGGTAGGTCCTTCGAAGTTTATATTCTATGAAAAGGGGTGTGATTGTGTTTTGGAAACTTTGTTCAAACAATTTGTTGTCGTACGATACATTTCTAGTGCTGTAAATATTTCATTACATTCTGCACTTTTGTCTTGAATAACATAGTGAGCTACGTGCAGAAAATATAAAGGAGTGTCATTTTATGGATACAACAGTACCTGGAAGAAATGCTCCTGAGGAAGTGACTCGTGAGTCGCTTATCTCCATTTCTTACGAGGAACCAGAAACGGTTCTCTCTTCAAACCAACCATCTGAAAAGATTAGTAGGGAAAACATCAATCTGGCCAACGGGATAAACCACAATCAGATGGAAGGGAAAGAATACGATGGAGATGAGAAATTCAGATCTGAGCTGATTGCAATTTCCTTCCTTGAGTCGCTACCTGAAACTGGAAGTGTACCTGTGGCCGAACTCAAGGGTTAGTAGTGCCTGGATGTCAGTTATAATAGTATACCTTATGTAAAATTGATACGAAACTAAGTTCATGTACGCGTTGTTTGGACTGTAGAGCAATGTGGTCCGTGTTCCTTTGTTTTTGTAACATAAACTCTTTGCACGGGTTGTTTGTTTGTCTGTACTAATCTTGTGGAAACTCATCGTTGTATGAGCCCAATGAATGAACTTGCGAACCCCTTGGTATACTCAGCATTCTCTTCCTTTTACATTTGTGTCGCTCTTAATGTAATAGTAATAACCATACCGTAGTGCCTTAGATATTGTATATAGGTTATACACTGGATGTTCATAGTTTTCAACTAATTATTTGTTTCAAGTA GATTTCAGACACTATTACGCGTTACCCGCTTTCTCTAGAAAATATAAAGGAGTGTCATTTTATGGATACAACAGTACCTGGAAGAAATGCTCCTGAGGAAGTGACTCGTGAGTCGCTTATCTCCATTTCTTACGAGGAACCAGAAACGGTTCTCTCTTCAAACCAACCATCTGAAAAGATTAGTAGGGAAAACATCAATCTGGCCAACGGGATAAACCACAATCAGATGGAAGGGAAAGAATACGATGGAGATGAGAAATTCAGATCTGAGCTGATTGCAATTTCCTTCCTTGAGTCGCTACCTGAAACTGGAAGTGTACCTGTGGCCGAACTCAAGGGTTAGTAGTGCCTGGATGTCAGTTATAATAGTATACCTTATGTAAAATTGATACGAAACTAAGTTCATGTACGCGTTGTTTGGACTGTAGAGCAATGTGGTCCGTGTTCCTTTGTTTTTGTAACATAAACTCTTTGCACGGGTTGTTTGTTTGTCTGTACTAATCTTGTGGAAACTCATCGTTGTATGAGCCCAATGAATGAACTTGCGAACCCCTTGGTATACTCAGCATTCTCTTCCTTTTACATTTGTGTCGCTCTTAATGTAATAGTAATAACCATACCGTAGTGCCTTAGATATTGTATATAGGTTATACACTGGATGTTCATAGTTTTCAACTAATTATTTGTTTCAAGTA ATGGATACAACAGTACCTGGAAGAAATGCTCCTGAGGAAGTGACTCGTGAGTCGCTTATCTCCATTTCTTACGAGGAACCAGAAACGGTTCTCTCTTCAAACCAACCATCTGAAAAGATTAGTAGGGAAAACATCAATCTGGCCAACGGGATAAACCACAATCAGATGGAAGGGAAAGAATACGATGGAGATGAGAAATTCAGATCTGAGCTGATTGCAATTTCCTTCCTTGAGTCGCTACCTGAAACTGGAAGTGTACCTGTGGCCGAACTCAAGGGTTAG MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKEYDGDEKFRSELIAISFLESLPETGSVPVAELKG*
BLAST of Cucsa.257170 vs. TrEMBL
Match: A0A0A0L967_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127140 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 4.6e-44 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.257170 vs. TrEMBL
Match: W9RTT6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023870 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 5.4e-13 Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 1
BLAST of Cucsa.257170 vs. TrEMBL
Match: M5X2Y3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013994mg PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.3e-11 Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 1
BLAST of Cucsa.257170 vs. TrEMBL
Match: A0A067K9F9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14696 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.2e-06 Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 1
BLAST of Cucsa.257170 vs. TrEMBL
Match: A0A0B0NEP9_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_17136 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.8e-06 Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 1
BLAST of Cucsa.257170 vs. NCBI nr
Match: gi|700201518|gb|KGN56651.1| (hypothetical protein Csa_3G127140 [Cucumis sativus]) HSP 1 Score: 184.9 bits (468), Expect = 6.6e-44 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.257170 vs. NCBI nr
Match: gi|659075609|ref|XP_008438235.1| (PREDICTED: uncharacterized protein LOC103483404 [Cucumis melo]) HSP 1 Score: 166.0 bits (419), Expect = 3.1e-38 Identity = 82/89 (92.13%), Postives = 86/89 (96.63%), Query Frame = 1
BLAST of Cucsa.257170 vs. NCBI nr
Match: gi|703103440|ref|XP_010097729.1| (hypothetical protein L484_023870 [Morus notabilis]) HSP 1 Score: 81.6 bits (200), Expect = 7.8e-13 Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 1
BLAST of Cucsa.257170 vs. NCBI nr
Match: gi|596012192|ref|XP_007218652.1| (hypothetical protein PRUPE_ppa013994mg [Prunus persica]) HSP 1 Score: 76.3 bits (186), Expect = 3.3e-11 Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 1
BLAST of Cucsa.257170 vs. NCBI nr
Match: gi|720061797|ref|XP_010275287.1| (PREDICTED: uncharacterized protein LOC104610397 [Nelumbo nucifera]) HSP 1 Score: 68.2 bits (165), Expect = 8.9e-09 Identity = 41/89 (46.07%), Postives = 59/89 (66.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |