Cucsa.257170 (gene) Cucumber (Gy14) v1

NameCucsa.257170
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold02229 : 4561800 .. 4564396 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTTCAGACACTATTACGCGTTACCCGCTTTCTCTAGGTATTTCCTCTCACCCCTTTTCAGTTTTTCTCTCCTTTTTGTTCTTTTCATCCATTATTTTtCTTTTTtCTTTTGTTTATTTTTTtGTTTAATTTGCTAATGATCTTTGGTTTTGATTTTGTTTTTtGAACGTCTTTGTTTTAACCTCTTTTTTTCTCTCTTTTATCGCCATAGGACTTGGGATTCGTACTTATTTAAATTTTGACTTCCTTCTTAGATAAAGGGATTGATAGATCATCCTGAtCTTTTTTTTTtttAAATTTTGGCATCTATTCAATCGGTAGGTTCTTTGGATGTAGGAAGATGGGAAATCATGGAAGGTGGTGTCTTTAGATTGTTCAAGATATGGGGTTAGATCTAATTAAAAGTTAGTGTTTAATTGGAATTAGGTGGCGGTAGTTTTATAGAGTTCTTGAATTAATTCTTCTGGTGTATTGTGTTCTCTTGATATTGGACAATCATTCTGTTGGAAACTGGAATCATCATACCTTCGCTCTGTCGTAATTAATCTGGGAATTTAGCTGCGGTGGTATGATTTTTCTTGATATATGCTTAAAATAGCAAGTGTATTTATTTCACCATATGGTTAATATATGTGCCTAAATGTTTGGGGAACATCAGCTTTTTCCGACGACAACAAGAAACCTTTGAATTTGGCTGATTCTAGTGTCTCTTCCTGCTTGGGGGGCGTATTTTTATATGCTGTTCCACTGTAGAGATGGGGTATATTTTTAATGTAGCGGACTCTACAAACTATTAGTGGATATAACATAATCTATTTAAACCTGTGACTAAAACACCAATCAATTTCATTATTTTAATGCAGGGTCGTTATGGTTGTCTGACTAGATTATGTAAGTTTCAGATTGTTTTTGACATGGCTTGGAAAAATACAGAGAATCATACGTGTAGGTCTCGAGGGATATGTATTGTCACGATAAGGTTTAGAAACTATATTTGGATTAAGGTTTTTTAGTCTTATTTTATCATGTTATCATGACAAAAATAGGCATGCCATTATTTTCTTCTTGGTTAGATGGGAATAAATGGAGTATTGAGTTAGTTAATAAGCTGGTTGGTTGTGTTTTTCTCTCACTCTGTTATTCGTTGCAGTTGTTTCTTTTATCTATTCTGCCTTATGCTTCCTCTACATTATAGTCCCTAAAAGAGTTCGAGATGATCAAAGTTCATGTTCCATATAAGTGATCCAGGGATTTTTCTGCATTCAATTTAGGAAATGAGATTAGAGTGCACAATCTTACTTGAACAGGATTTGTTCTATAGATTGGACATCTATGTCCTTAAGTTCTAAGGAAATTAGATTAGAGTGTATTAGAACATTCAGCTTAGTTTAAACTTTCTATGGTCAAGGTTCATACCTCCTTTTATTGTCCTTCAGTAACTTTTTTGATCGGTTTGGTTTTTGTACTCTGGTTGAGTCAGGTTGCTGTTAGAATAATGATTCTTCACTTTTATCAAGTCTTGGCTGAGATGTAAACAATGATGAGTGCAACATAGGATAGAGTACCTTCCTAGTTTAATGGGTATTCTACTTAAATCGGCTGTTCTTAATTAACTATTATATTATGCTTAAGTTTTTCCATGCAAAATCTGCACTAAATTTGAATGGATATCTAAACATCATTCACTTGTTTTGTTAACTGCAATCAAATTATGCATTCCTTTCCTCCCATTTTATTGGCCTTGTGTGCCTGTCTATATGTGGTGCAAAAGACTCTACATGGTAGGTCCTTCGAAGTTTATATTCTATGAAAAGGGGTGTGATTGTGTTTTGGAAACTTTGTTCAAACAATTTGTTGTCGTACGATACATTTCTAGTGCTGTAAATATTTCATTACATTCTGCACTTTTGTCTTGAATAACATAGTGAGCTACGTGCAGAAAATATAAAGGAGTGTCATTTTATGGATACAACAGTACCTGGAAGAAATGCTCCTGAGGAAGTGACTCGTGAGTCGCTTATCTCCATTTCTTACGAGGAACCAGAAACGGTTCTCTCTTCAAACCAACCATCTGAAAAGATTAGTAGGGAAAACATCAATCTGGCCAACGGGATAAACCACAATCAGATGGAAGGGAAAGAATACGATGGAGATGAGAAATTCAGATCTGAGCTGATTGCAATTTCCTTCCTTGAGTCGCTACCTGAAACTGGAAGTGTACCTGTGGCCGAACTCAAGGGTTAGTAGTGCCTGGATGTCAGTTATAATAGTATACCTTATGTAAAATTGATACGAAACTAAGTTCATGTACGCGTTGTTTGGACTGTAGAGCAATGTGGTCCGTGTTCCTTTGTTTTTGTAACATAAACTCTTTGCACGGGTTGTTTGTTTGTCTGTACTAATCTTGTGGAAACTCATCGTTGTATGAGCCCAATGAATGAACTTGCGAACCCCTTGGTATACTCAGCATTCTCTTCCTTTTACATTTGTGTCGCTCTTAATGTAATAGTAATAACCATACCGTAGTGCCTTAGATATTGTATATAGGTTATACACTGGATGTTCATAGTTTTCAACTAATTATTTGTTTCAAGTA

mRNA sequence

GATTTCAGACACTATTACGCGTTACCCGCTTTCTCTAGAAAATATAAAGGAGTGTCATTTTATGGATACAACAGTACCTGGAAGAAATGCTCCTGAGGAAGTGACTCGTGAGTCGCTTATCTCCATTTCTTACGAGGAACCAGAAACGGTTCTCTCTTCAAACCAACCATCTGAAAAGATTAGTAGGGAAAACATCAATCTGGCCAACGGGATAAACCACAATCAGATGGAAGGGAAAGAATACGATGGAGATGAGAAATTCAGATCTGAGCTGATTGCAATTTCCTTCCTTGAGTCGCTACCTGAAACTGGAAGTGTACCTGTGGCCGAACTCAAGGGTTAGTAGTGCCTGGATGTCAGTTATAATAGTATACCTTATGTAAAATTGATACGAAACTAAGTTCATGTACGCGTTGTTTGGACTGTAGAGCAATGTGGTCCGTGTTCCTTTGTTTTTGTAACATAAACTCTTTGCACGGGTTGTTTGTTTGTCTGTACTAATCTTGTGGAAACTCATCGTTGTATGAGCCCAATGAATGAACTTGCGAACCCCTTGGTATACTCAGCATTCTCTTCCTTTTACATTTGTGTCGCTCTTAATGTAATAGTAATAACCATACCGTAGTGCCTTAGATATTGTATATAGGTTATACACTGGATGTTCATAGTTTTCAACTAATTATTTGTTTCAAGTA

Coding sequence (CDS)

ATGGATACAACAGTACCTGGAAGAAATGCTCCTGAGGAAGTGACTCGTGAGTCGCTTATCTCCATTTCTTACGAGGAACCAGAAACGGTTCTCTCTTCAAACCAACCATCTGAAAAGATTAGTAGGGAAAACATCAATCTGGCCAACGGGATAAACCACAATCAGATGGAAGGGAAAGAATACGATGGAGATGAGAAATTCAGATCTGAGCTGATTGCAATTTCCTTCCTTGAGTCGCTACCTGAAACTGGAAGTGTACCTGTGGCCGAACTCAAGGGTTAG

Protein sequence

MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKEYDGDEKFRSELIAISFLESLPETGSVPVAELKG*
BLAST of Cucsa.257170 vs. TrEMBL
Match: A0A0A0L967_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127140 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.6e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1

Query: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60
          MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE
Sbjct: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60

Query: 61 YDGDEKFRSELIAISFLESLPETGSVPVAELKG 94
          YDGDEKFRSELIAISFLESLPETGSVPVAELKG
Sbjct: 61 YDGDEKFRSELIAISFLESLPETGSVPVAELKG 93

BLAST of Cucsa.257170 vs. TrEMBL
Match: W9RTT6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023870 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 5.4e-13
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 1

Query: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60
          MD T P +  PEEVTRESLISISY  PE VL+S   S+K++ EN+          + G +
Sbjct: 1  MDKTAPEKEVPEEVTRESLISISYSLPENVLTSKPSSDKLNGENL----------VGGID 60

Query: 61 YDGDEKFRSELIAISFLESLPETGSVPVA 90
           DG++KFRSELI+IS+ +S P+ G +PVA
Sbjct: 61 CDGEDKFRSELISISYTQS-PDVGGLPVA 78

BLAST of Cucsa.257170 vs. TrEMBL
Match: M5X2Y3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013994mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.3e-11
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 1

Query: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60
          MD    G  APEEVTRESLI+ISY EPE +++SN  S K++   +N         ++   
Sbjct: 1  MDKARLGNGAPEEVTRESLIAISYPEPEKIITSNLSSGKLNGGKLNGGKLNGEALVKTIV 60

Query: 61 YDGDEKFRSELIAISFLESLPETGSVPV 89
           DG++KFRSELI+IS+ +S PE GS+PV
Sbjct: 61 SDGEDKFRSELISISYTQS-PEVGSLPV 87

BLAST of Cucsa.257170 vs. TrEMBL
Match: A0A067K9F9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14696 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.2e-06
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 1

Query: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60
          MD   PG++ PEE+TRESLI+ISY  P+  L+S   SE +  ++I  A           +
Sbjct: 1  MDKITPGKDVPEELTRESLIAISYSVPDNTLASKLSSENLETKDIVEA-----------D 60

Query: 61 YDGDEKFRSELIAISFLESLPETGSVPV 89
           DG +K RSELI+IS  +S P+   +PV
Sbjct: 61 CDGADKCRSELISISNSQS-PDDKRLPV 76

BLAST of Cucsa.257170 vs. TrEMBL
Match: A0A0B0NEP9_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_17136 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.8e-06
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 1

Query: 1  MDTTVPGRNAP-EEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGK 60
          MD   PG +   +EVTRESLI+ISY  P+ V++++    K+S +N N          E K
Sbjct: 1  MDNKKPGNDGTADEVTRESLIAISYSLPDKVVAAS----KLSSDNSN-----REKLFERK 60

Query: 61 EYDGDEKFRSELIAISFLESLPETGS 86
            DGDEK+RSELI+IS+ +S    GS
Sbjct: 61 GSDGDEKYRSELISISYSQSPEGKGS 77

BLAST of Cucsa.257170 vs. NCBI nr
Match: gi|700201518|gb|KGN56651.1| (hypothetical protein Csa_3G127140 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 6.6e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1

Query: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60
          MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE
Sbjct: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60

Query: 61 YDGDEKFRSELIAISFLESLPETGSVPVAELKG 94
          YDGDEKFRSELIAISFLESLPETGSVPVAELKG
Sbjct: 61 YDGDEKFRSELIAISFLESLPETGSVPVAELKG 93

BLAST of Cucsa.257170 vs. NCBI nr
Match: gi|659075609|ref|XP_008438235.1| (PREDICTED: uncharacterized protein LOC103483404 [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 3.1e-38
Identity = 82/89 (92.13%), Postives = 86/89 (96.63%), Query Frame = 1

Query: 1   MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60
           MD TVPGRNAPEEVTRESLISISYEEPET+LSS +PSEK+S ENINLANGINHNQ+EGKE
Sbjct: 51  MDITVPGRNAPEEVTRESLISISYEEPETILSSKRPSEKLSSENINLANGINHNQVEGKE 110

Query: 61  YDGDEKFRSELIAISFLESLPETGSVPVA 90
           YDGDEKFRSELIAISFLESLPETGSVPVA
Sbjct: 111 YDGDEKFRSELIAISFLESLPETGSVPVA 139

BLAST of Cucsa.257170 vs. NCBI nr
Match: gi|703103440|ref|XP_010097729.1| (hypothetical protein L484_023870 [Morus notabilis])

HSP 1 Score: 81.6 bits (200), Expect = 7.8e-13
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 1

Query: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60
          MD T P +  PEEVTRESLISISY  PE VL+S   S+K++ EN+          + G +
Sbjct: 1  MDKTAPEKEVPEEVTRESLISISYSLPENVLTSKPSSDKLNGENL----------VGGID 60

Query: 61 YDGDEKFRSELIAISFLESLPETGSVPVA 90
           DG++KFRSELI+IS+ +S P+ G +PVA
Sbjct: 61 CDGEDKFRSELISISYTQS-PDVGGLPVA 78

BLAST of Cucsa.257170 vs. NCBI nr
Match: gi|596012192|ref|XP_007218652.1| (hypothetical protein PRUPE_ppa013994mg [Prunus persica])

HSP 1 Score: 76.3 bits (186), Expect = 3.3e-11
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 1

Query: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60
          MD    G  APEEVTRESLI+ISY EPE +++SN  S K++   +N         ++   
Sbjct: 1  MDKARLGNGAPEEVTRESLIAISYPEPEKIITSNLSSGKLNGGKLNGGKLNGEALVKTIV 60

Query: 61 YDGDEKFRSELIAISFLESLPETGSVPV 89
           DG++KFRSELI+IS+ +S PE GS+PV
Sbjct: 61 SDGEDKFRSELISISYTQS-PEVGSLPV 87

BLAST of Cucsa.257170 vs. NCBI nr
Match: gi|720061797|ref|XP_010275287.1| (PREDICTED: uncharacterized protein LOC104610397 [Nelumbo nucifera])

HSP 1 Score: 68.2 bits (165), Expect = 8.9e-09
Identity = 41/89 (46.07%), Postives = 59/89 (66.29%), Query Frame = 1

Query: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60
          MDT VPG+   +E+ RESLI+IS   P+ VL S     ++  EN+N     N N +E +E
Sbjct: 1  MDTQVPGKEVSQELARESLIAISQSIPDKVLVS-----ELYSENLN-----NKNVVEVEE 60

Query: 61 YDGDEKFRSELIAISFLESLPETGSVPVA 90
           DG EK+RSELI+IS+++S P+  ++PVA
Sbjct: 61 SDGAEKYRSELISISYMQS-PDIKTLPVA 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L967_CUCSA4.6e-44100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127140 PE=4 SV=1[more]
W9RTT6_9ROSA5.4e-1350.56Uncharacterized protein OS=Morus notabilis GN=L484_023870 PE=4 SV=1[more]
M5X2Y3_PRUPE2.3e-1148.86Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013994mg PE=4 SV=1[more]
A0A067K9F9_JATCU2.2e-0642.05Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14696 PE=4 SV=1[more]
A0A0B0NEP9_GOSAR3.8e-0644.19Uncharacterized protein OS=Gossypium arboreum GN=F383_17136 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700201518|gb|KGN56651.1|6.6e-44100.00hypothetical protein Csa_3G127140 [Cucumis sativus][more]
gi|659075609|ref|XP_008438235.1|3.1e-3892.13PREDICTED: uncharacterized protein LOC103483404 [Cucumis melo][more]
gi|703103440|ref|XP_010097729.1|7.8e-1350.56hypothetical protein L484_023870 [Morus notabilis][more]
gi|596012192|ref|XP_007218652.1|3.3e-1148.86hypothetical protein PRUPE_ppa013994mg [Prunus persica][more]
gi|720061797|ref|XP_010275287.1|8.9e-0946.07PREDICTED: uncharacterized protein LOC104610397 [Nelumbo nucifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.257170.2Cucsa.257170.2mRNA
Cucsa.257170.1Cucsa.257170.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35282FAMILY NOT NAMEDcoord: 1..89
score: 8.4
NoneNo IPR availablePANTHERPTHR35282:SF2F5D14.24 PROTEINcoord: 1..89
score: 8.4

The following gene(s) are paralogous to this gene:

None