Carg14873 (gene) Silver-seed gourd

NameCarg14873
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPorin QuiX like
LocationCucurbita_argyrosperma_scaffold_079 : 414474 .. 417333 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATAACAGTACCTGGTGGGAATGATCCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATTTCTTACGAGGAACCAGAAACAACTCTCTCTTCCAAGCGATCATCTGGAAAGCTCAGTAGCGAAAACCTCAATCTGGTCAACGGGATAGACCACAATCTGGTGGAAGGGAAAGAATATGATGTAGAGAAATATAGATCTGAGCTGATAGCTATTTCCTTTCTTGAGTCACCACCTGAAATTGGAAGTGGAACCGTGACCGAACTCAAGGGTTAGTGCCTGGACGTCCGTTATCATAAATGTATACGTTCTTATGTAAAAATGGTACTAATCTAAGTTCATGGATGTGTTGTTATGACTGTAGAGCAATGCTGTCCATGTTCGTTGTTTTTGTAACATAAACCCTCTGCACGGGTTGTCTGTCTGTACTATCTTGTGGAAACTTATTGCTGTGTGAACCCAATGAATGAACTTGGTACTCAGCATTTTTCTTATACATTTATGTCATTATATTGTAATATCATACAGTGGTGCCTTAAATATTGTATATAGCTTATACATTGTATGTTAATAGTTTCAAACTAATTATTGTTTCAGGTAGTTTATAGTTAAGATAATTGAGTTTAGTACTTGAGGAGAGTCGTTTGATATCTATGCTAACTATTCGGCCGGCTTGGTTAGTTTAGTTGCATAACATTGTTATATGCTTGTTATACTGCTCATTGTTTCTGAGTGGTTCGTTTTCTGTCAAAAACCTGATTCCAAACTATTCTCCTGACTGAAGTTTGTAAATCCAGCCAAAATTTAGCAAATGGTTGCACAATTTTCTTGGAATGCTGAAAGAATTGAAAAATGATCTTTAGTTTGGTAGCCTTTCAACATCAGATTCACAAGAAATAGAGTGAGTTAAGGACACATGAGTTCCATTTTTGGTGAATTAGTTAATAAGCTTGCTGCTTGTGTTTTTTACTCCATCTCCTTTTCATTTCAATTGTTTCTTTTCTCTATCCTGCCTTAGCTGAGTTGATCAAACTCCAGGCCCGACAGAAGAGCACCGTAAGGGAGTTTTGTGCATTTAGTTTAGGAAATGAGATTAAAGTGCATTAGAACAAGCGGCGTAATTTAAAATTATTAGTTCAAGGTTCATACCTCCTTTTATTGTCCTTTAGTAATTTTTTAAAGGTCTGGTTTTTGTAGTCTTGTTGAGTCAGGTTGCTGCTAGAATATTGATTCTTTGCTTTTATTGAGTCTTGGCTGTGACGTCAACAACAATGCATGCAACTTAGACTAGAGTACCTGCTTAATTTCAAATCTGCTGTTCTTCTGAATTAGTCATTGTATGTATGAGTTTTTCCATGCAAAACCTGCACACAATTTCAATGGACATCTAAAGATCATTCCCCTGTTTGATTAACTGCAATCAAATTATGCATTCCTTTCCTCCCAATTTTCTTGGTCGCTGTTGTGTGCTTGTCTATATGTGCTGTAAGACTCTAGTTTCTGCATTTACATGGTAGGTCTTTTGAAGTTCAAGGGGGGTGATTGTGTTTAGAAATTTTGTTCATATTTTTTGTTGTCATTCATTGCCAGTGCCGTTAATAGTTCATTGCATAGCTTCTGCACATTTGTCCAAGCTAGAATAATATAGCTTCTGCACGTCGCTTATTGCCATCTCTTACGTGGAACCAGTAACAATTTTCTCTTCAAAGCAATCATCTGGAAAGCTTGGTAGCGAAAACCTCAATCTGGTCAATGAGATAGACCACAATCTGGTGAAAGGGAAAGAATACAATGATGATAAATATAGATCTGAGCTGACAGCTATTTCCTTCCTCGAGTCACCACCTGAAATTGGAAGTGGAACAGTGGCCGAACACAAGGGTTAGTGACTGGACGTCGATTGTATACGTTCTTATGTAAAAATGATACTAATCTAAGTTCATGAACGTGTTGTTACGTCTGTAGAGCAATGCTGTTTGTAACAATAAAAAACAAACCTCTGCACGGGTTGTATGTCTATACTATCTTGTGGAAACTTATTGCTGTGTGAACCCAATGAATGAACTAGGTACACAGCATTTTTCTTTTACATTTGTGTCATTTTATTCTAATGTCATACAGTGGTGCCTTAAATATTGTATATAGGTTATACATTGTATGTTCATAGTTTCGAACTAATTATTGTTTCAAGTAGTTTGTAGGTGAGACGTTTGAGTTTAGTATTTGATGAGAGTCGTTTGGTATCTATGCTAACTATTCGGCTGGTTTGGTTAGTTTAGTTGCATAAGATTGTAATGTGCTTGTTAGACCTCGGTCATTGTTTCTGAGTGGTTTGTTTTTTATTGTTAGTGTCGAAAACCTGATTCCAAGCTGTTCTCCTAACTAAAGTTTTGTAAATCCAGATTCCAAAATTTAGCAAATGGTTGTACAAAGTTCCTGGAATGCTGAAAGAATTGAAAAATGATCTTTAGCTATGAATGAGACAGGTCAAAGATGATGGAGAACGATGGAAACAACCGGAATCATCGGTAGCCTTTCCACATCAGATTCACAAGAATAGGGTGAGTGAAGGGCATATGAGTTTCATTTTGGGTGAGTCGGTTATAAATATGAATACTAACGTATGCACGTGAATCAGGTCAGGAGGCAGTGGGCGTCATTGATGAAAACAAAGAAACGGGTTTAAAGCATGCTGAAAGGCCAATCAAAGTGTTTGGAGAACAAATTCAGTTAAGTATTCTGAGGCTGTAAATTTTGTTGGGATTTGGACCAAACAGACACTTGGCTTTCATGATTTTTGCAAATGGGGCTCTGAATAATTTGTGGGGGTTGCAAAGGCTAAAATGCGGTGAAGAAC

mRNA sequence

ATGGATATAACAGTACCTGGTGGGAATGATCCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATTTCTTACGAGGAACCAGAAACAACTCTCTCTTCCAAGCGATCATCTGGAAAGCTCAGTAGCGAAAACCTCAATCTGGTCAACGGGATAGACCACAATCTGGTGGAAGGGAAAGAATATGATGTAGAGAAATATAGATCTGAGCTGATAGCTATTTCCTTTCTTGAGTCACCACCTGAAATTGGAAGTGGAACCGTGACCGAACTCAAGGTAACAATTTTCTCTTCAAAGCAATCATCTGGAAAGCTTGGTAGCGAAAACCTCAATCTGGTCAATGAGATAGACCACAATCTGGTGAAAGGGAAAGAATACAATGATGATAAATATAGATCTGAGCTGACAGCTATTTCCTTCCTCGAGTCACCACCTGAAATTGGAAGTGGAACAGTGGCCGAACACAAGGGTCAGGAGGCAGTGGGCGTCATTGATGAAAACAAAGAAACGGGTTTAAAGCATGCTGAAAGGCCAATCAAAGTGTTTGGAGAACAAATTCAGTTAAGTATTCTGAGGCTGTAAATTTTGTTGGGATTTGGACCAAACAGACACTTGGCTTTCATGATTTTTGCAAATGGGGCTCTGAATAATTTGTGGGGGTTGCAAAGGCTAAAATGCGGTGAAGAAC

Coding sequence (CDS)

ATGGATATAACAGTACCTGGTGGGAATGATCCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATTTCTTACGAGGAACCAGAAACAACTCTCTCTTCCAAGCGATCATCTGGAAAGCTCAGTAGCGAAAACCTCAATCTGGTCAACGGGATAGACCACAATCTGGTGGAAGGGAAAGAATATGATGTAGAGAAATATAGATCTGAGCTGATAGCTATTTCCTTTCTTGAGTCACCACCTGAAATTGGAAGTGGAACCGTGACCGAACTCAAGGTAACAATTTTCTCTTCAAAGCAATCATCTGGAAAGCTTGGTAGCGAAAACCTCAATCTGGTCAATGAGATAGACCACAATCTGGTGAAAGGGAAAGAATACAATGATGATAAATATAGATCTGAGCTGACAGCTATTTCCTTCCTCGAGTCACCACCTGAAATTGGAAGTGGAACAGTGGCCGAACACAAGGGTCAGGAGGCAGTGGGCGTCATTGATGAAAACAAAGAAACGGGTTTAAAGCATGCTGAAAGGCCAATCAAAGTGTTTGGAGAACAAATTCAGTTAAGTATTCTGAGGCTGTAA

Protein sequence

MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQSSGKLGSENLNLVNEIDHNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKGQEAVGVIDENKETGLKHAERPIKVFGEQIQLSILRL
BLAST of Carg14873 vs. NCBI nr
Match: KGN56651.1 (hypothetical protein Csa_3G127140 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 3.2e-25
Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 0

Query: 1  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60
          MD TVPG N PEEVTRESLI+ISYEEPET LSS + S K+S EN+NL NGI+HN +EGKE
Sbjct: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60

Query: 61 YD-VEKYRSELIAISFLESPPEIGSGTVTELK 92
          YD  EK+RSELIAISFLES PE GS  V ELK
Sbjct: 61 YDGDEKFRSELIAISFLESLPETGSVPVAELK 92

BLAST of Carg14873 vs. NCBI nr
Match: XP_022974968.1 (uncharacterized protein LOC111473815 [Cucurbita maxima])

HSP 1 Score: 115.9 bits (289), Expect = 1.5e-22
Identity = 68/92 (73.91%), Postives = 73/92 (79.35%), Query Frame = 0

Query: 1   MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60
           MDITVPG N  EEVTRESLIAISY EPE+ LSSKR SGKL+S+NL        NLVEGKE
Sbjct: 25  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNL--------NLVEGKE 84

Query: 61  YDV-EKYRSELIAISFLESPPEIGSGTVTELK 92
           +D  EKYRSELIAISFLESPPEIGS  V +LK
Sbjct: 85  FDADEKYRSELIAISFLESPPEIGSVPVGKLK 108

BLAST of Carg14873 vs. NCBI nr
Match: XP_022963288.1 (uncharacterized protein LOC111463263 [Cucurbita moschata])

HSP 1 Score: 114.8 bits (286), Expect = 3.3e-22
Identity = 67/92 (72.83%), Postives = 73/92 (79.35%), Query Frame = 0

Query: 1   MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60
           MDITVPG N  EEVTRESLIAISY EPE+ LSSKR SGKL+S+NL        NLVEGKE
Sbjct: 25  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNL--------NLVEGKE 84

Query: 61  YDV-EKYRSELIAISFLESPPEIGSGTVTELK 92
           +D  EKYRSELI+ISFLESPPEIGS  V +LK
Sbjct: 85  FDADEKYRSELISISFLESPPEIGSVPVGKLK 108

BLAST of Carg14873 vs. NCBI nr
Match: EXB70684.1 (hypothetical protein L484_023870 [Morus notabilis])

HSP 1 Score: 68.9 bits (167), Expect = 2.1e-08
Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 0

Query: 1  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60
          MD T P    PEEVTRESLI+ISY  PE  L+SK SS KL+ E  NLV GID    +G+ 
Sbjct: 1  MDKTAPEKEVPEEVTRESLISISYSLPENVLTSKPSSDKLNGE--NLVGGID---CDGE- 60

Query: 61 YDVEKYRSELIAISFLESP 80
             +K+RSELI+IS+ +SP
Sbjct: 61 ---DKFRSELISISYTQSP 70

BLAST of Carg14873 vs. NCBI nr
Match: KDP28925.1 (hypothetical protein JCGZ_14696 [Jatropha curcas])

HSP 1 Score: 60.5 bits (145), Expect = 7.4e-06
Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0

Query: 1   MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60
           MD   PG + PEE+TRESLIAISY  P+ TL+S     KLSSENL        ++VE   
Sbjct: 1   MDKITPGKDVPEELTRESLIAISYSVPDNTLAS-----KLSSENLE-----TKDIVEADC 60

Query: 61  YDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQSSGKLGS 107
              +K RSELI+IS  +SP +        L VT+   K+ +  +GS
Sbjct: 61  DGADKCRSELISISNSQSPDD------KRLPVTVGEVKRLAWTVGS 90

BLAST of Carg14873 vs. TrEMBL
Match: tr|A0A0A0L967|A0A0A0L967_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127140 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.1e-25
Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 0

Query: 1  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60
          MD TVPG N PEEVTRESLI+ISYEEPET LSS + S K+S EN+NL NGI+HN +EGKE
Sbjct: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60

Query: 61 YD-VEKYRSELIAISFLESPPEIGSGTVTELK 92
          YD  EK+RSELIAISFLES PE GS  V ELK
Sbjct: 61 YDGDEKFRSELIAISFLESLPETGSVPVAELK 92

BLAST of Carg14873 vs. TrEMBL
Match: tr|W9RTT6|W9RTT6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023870 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-08
Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 0

Query: 1  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60
          MD T P    PEEVTRESLI+ISY  PE  L+SK SS KL+ E  NLV GID    +G+ 
Sbjct: 1  MDKTAPEKEVPEEVTRESLISISYSLPENVLTSKPSSDKLNGE--NLVGGID---CDGE- 60

Query: 61 YDVEKYRSELIAISFLESP 80
             +K+RSELI+IS+ +SP
Sbjct: 61 ---DKFRSELISISYTQSP 70

BLAST of Carg14873 vs. TrEMBL
Match: tr|A0A2N9IZZ1|A0A2N9IZZ1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57625 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 43/79 (54.43%), Postives = 48/79 (60.76%), Query Frame = 0

Query: 1   MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENL-NLVNGIDHNLVEGK 60
           MD TVPG   PEEVTRESLIAISY  P+   +SK SS K    N  NLV  ID N     
Sbjct: 29  MDKTVPGKEAPEEVTRESLIAISYPVPDKVPTSKLSSEKSEKLNSENLVEAIDSN----- 88

Query: 61  EYDVEKYRSELIAISFLES 79
               EK RSELI+IS+ +S
Sbjct: 89  --GEEKCRSELISISYTQS 100

BLAST of Carg14873 vs. TrEMBL
Match: tr|A0A2P2J5H6|A0A2P2J5H6_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.7e-06
Identity = 41/79 (51.90%), Postives = 49/79 (62.03%), Query Frame = 0

Query: 1  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60
          MD T  G   PEEVTRESLIA+SY  PE  ++SK     +  E  NLV GID     G+ 
Sbjct: 1  MDKTETGKKAPEEVTRESLIALSYSLPEKVVASKLFGENVDRE--NLVGGID-----GEG 60

Query: 61 YDVEKYRSELIAISFLESP 80
            V+ YRSELI+IS L+SP
Sbjct: 61 DGVDTYRSELISISSLQSP 72

BLAST of Carg14873 vs. TrEMBL
Match: tr|A0A067K9F9|A0A067K9F9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14696 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.9e-06
Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0

Query: 1   MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60
           MD   PG + PEE+TRESLIAISY  P+ TL+S     KLSSENL        ++VE   
Sbjct: 1   MDKITPGKDVPEELTRESLIAISYSVPDNTLAS-----KLSSENLE-----TKDIVEADC 60

Query: 61  YDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQSSGKLGS 107
              +K RSELI+IS  +SP +        L VT+   K+ +  +GS
Sbjct: 61  DGADKCRSELISISNSQSPDD------KRLPVTVGEVKRLAWTVGS 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN56651.13.2e-2573.91hypothetical protein Csa_3G127140 [Cucumis sativus][more]
XP_022974968.11.5e-2273.91uncharacterized protein LOC111473815 [Cucurbita maxima][more]
XP_022963288.13.3e-2272.83uncharacterized protein LOC111463263 [Cucurbita moschata][more]
EXB70684.12.1e-0855.70hypothetical protein L484_023870 [Morus notabilis][more]
KDP28925.17.4e-0643.40hypothetical protein JCGZ_14696 [Jatropha curcas][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L967|A0A0A0L967_CUCSA2.1e-2573.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127140 PE=4 SV=1[more]
tr|W9RTT6|W9RTT6_9ROSA1.4e-0855.70Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023870 PE=4 SV=1[more]
tr|A0A2N9IZZ1|A0A2N9IZZ1_FAGSY1.3e-0654.43Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57625 PE=4 SV=1[more]
tr|A0A2P2J5H6|A0A2P2J5H6_RHIMU1.7e-0651.90Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
tr|A0A067K9F9|A0A067K9F9_JATCU4.9e-0643.40Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14696 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14873-RACarg14873-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35282:SF5SUBFAMILY NOT NAMEDcoord: 6..79
NoneNo IPR availablePANTHERPTHR35282FAMILY NOT NAMEDcoord: 6..79

The following gene(s) are paralogous to this gene:

None