Cucsa.252700 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGAGCTCCTTGTTGTGAAAAAGTGGGGCTGAAAAGGGGAAGATGGACAGCTGAAGAAGATGAGATCTTGACCAATTATATTCAAGCTAATGGTGAAGGCTCATGGAGATCCTTACCAAAGAATGCAGGTTCCATTTCAATTCATTTTCATTGCTTTTTCTTTCTCATAGCTTGATCAGTACAATGACTAATTGTTTGAGTTTTGTAGAATGAAATTACAAACTTCGTTTTGATTTAGATTCTCTTGTATGGGTGTGTGTTTTTGTCAACATTTTGTGCTTTTTTtGTTGGTTTTGATTCAGCTGTATATGCTTACAGACTCTGTTTTGCTTTTGGACGACTCTGAAAAATCATTTTTAAAAGTTCGTCTTTGTTTTTAAGTTTTCAACTCGAAATTTAAATGCTTATATAGTGAAAAAAAATCACAAGTATAAATTTTACTATTGAACATATGGTTCTGATATATTTATGGTTTATATGATGTAAAAGGATTGTTGAGATGTGGGAAGAGTTGTAGATTGAGATGGATTAACTATCTGAGGACAGATTTGAAGAGAGGGAACATCACAACTGAGGAAGAACAGATGATTGTAAAGCTACATAATGTTTTTGGCAACAGGTACGAACACAACTGATTTTTCAATTGATAATTAAATACATTTTCATGTTATTGGCAACAACACGACTTACTCACTTTAGTTTTTCATACCTTATGATCACTTAATGATTATTAGCTTAATTAATTTACTATGATAATCAATTTTTTACTTCTTATATTTTGATAATTTATTTTTCACTCGAAAAACTGATGGAGACATTTTTTGACAAAGCAAATATAAATTAACCGTTTACTTCTCGATATTTCACGTATTACTTAGTTGTTAGCTTGTGTTTTTTTtCTTTTtCGTTTTTCATCTTTAAATTTTTtAATTATACTGTTTTTAGCATTTGATAGTGCATGATGTTTAAAAGGTGTGTATTTAACAAATTAAATCCTTTAATAAGTGCATGAATGAACTCATTTTGTTTTTTTTttACTTATTTaTAAAaTTAAACGTATATATAAGCATGTGTTTGATGTTGACACGCTACGTAGTGAGTCTCCGAATTTTGAAAaGTTAAGATTTATATTTTAATATAAaTAAATTAATGTCAAGTATGCATAACTCAAaTGAaTACAAAAAAAAAAaaaaaTaTTATCATCTCCAAGTCAAAGGTTGTCGTTGGATCTCTCTACACCCGGCCATGCATATCGCATATTGAAAAAAAaCTAAGTGACTTCTTTTTAATTTTAAAAGATACTTTTGTAACTTTCGTTACGAAAATGAGTAATAGATCCATTAAGACATGATATGATAATGGACTAAAAGATCTATAATTAAAATCTTCCCTTTGCCAATACATGAACATAATTCAACGTCTAATAAAATGAACTAATTATATTATGGATTTGAGTTTTGAGGTATGATTTTGTATAGTAAAAAAGAGAAACTATTTTTATTTtGATGTATAGAGAAAGTAATAAATTTGATCCAAATTAACAATCAATCCCATGTGATCATAATATATATTTTCCATATTTGGTTTAAATTTAAGAAATGTGTAGAAGGATGGGGTGTCCCCCAGTCCCTCAGTCCCTCAGTCCCACCTTAAATTTAAAGCTAATTAACATTTGGTGGTGTGGTGTAGCATTTGTTCTTAGCACGGACCACAATTGAACACACAATTATTCAAAAACCCTAAATACAAAGAGAGCAAACGACAAAAGCCATTACATTTTTAACAGTTTCTTTTTTCCCATTTTCATTCAATCTTGTCTCCCAATGCAAATAAATATGCCCAACCAAAAATAAAATTTCGTGGACCCTTAGACTGTACACATCATGTCTATTTACTTCCAATTCTAATGTATTAATTTTTCCTTCATTTTCATCCATATATGTATAATATTAATTGAGACGTTGTTGAATGAACACGATGATAATGTTTGGTTCGTTGAGTAGTTAATTAGGGTTTTAAACTATATATGTGTGTGTGACAACTATTTTGGATTTGACGGTGTTTTAGGTGGTCTTTGATAGCGGGACATTTACCTGGCCGGACAGACAACGAAATAAAGAACTATTGGAACTCTCATCTAAGTCGAAGAATCTACACAATGACACGACTTTCTGCTAAGTCGTCTTCACCCATAACTGGCATCCTTGACATTACTCCTGCATCGAAGCGAAAGCGAAACATTAGCAAAAGTGCCCAACAACAAGCTGCTACTGTCAAAATGAAAACAACTGAGAAAGAAAAAGTAGAAAAAGGGTTGAGCTCGGAAGAGGATGATAAAGAAGATGAAGATGGATTGGGAAATAGTAGAGTAGTATTGAATGATGGAGGTGAAGAGGACTTGGGACCATATGATTGGCTAGATGGTGAAATAATGAGACTGAATAATGAAATTATTGAATGGGGAATGGGGGAGTCAAGAGGCAATAATAACAATGGATGCAATGAGAAAGTGAGATGTACTGAAGATCATAATCATAATTATGGTTCTAATTGTTCTTCTTCAGTGAATTCAGCTTTGGAAATGGATCAATGGTTGAATTGGGATTGGGATCATCAAGATAATGGATCAATGGAAGGATGTAGTTTGGATCAATGGGAACTTGAGGAAATTTCATCTTGG ATGGTGAGAGCTCCTTGTTGTGAAAAAGTGGGGCTGAAAAGGGGAAGATGGACAGCTGAAGAAGATGAGATCTTGACCAATTATATTCAAGCTAATGGTGAAGGCTCATGGAGATCCTTACCAAAGAATGCAGGATTGTTGAGATGTGGGAAGAGTTGTAGATTGAGATGGATTAACTATCTGAGGACAGATTTGAAGAGAGGGAACATCACAACTGAGGAAGAACAGATGATTGTAAAGCTACATAATGTTTTTGGCAACAGGTGGTCTTTGATAGCGGGACATTTACCTGGCCGGACAGACAACGAAATAAAGAACTATTGGAACTCTCATCTAAGTCGAAGAATCTACACAATGACACGACTTTCTGCTAAGTCGTCTTCACCCATAACTGGCATCCTTGACATTACTCCTGCATCGAAGCGAAAGCGAAACATTAGCAAAAGTGCCCAACAACAAGCTGCTACTGTCAAAATGAAAACAACTGAGAAAGAAAAAGTAGAAAAAGGGTTGAGCTCGGAAGAGGATGATAAAGAAGATGAAGATGGATTGGGAAATAGTAGAGTAGTATTGAATGATGGAGGTGAAGAGGACTTGGGACCATATGATTGGCTAGATGGTGAAATAATGAGACTGAATAATGAAATTATTGAATGGGGAATGGGGGAGTCAAGAGGCAATAATAACAATGGATGCAATGAGAAAGTGAGATGTACTGAAGATCATAATCATAATTATGGTTCTAATTGTTCTTCTTCAGTGAATTCAGCTTTGGAAATGGATCAATGGTTGAATTGGGATTGGGATCATCAAGATAATGGATCAATGGAAGGATGTAGTTTGGATCAATGGGAACTTGAGGAAATTTCATCTTGG ATGGTGAGAGCTCCTTGTTGTGAAAAAGTGGGGCTGAAAAGGGGAAGATGGACAGCTGAAGAAGATGAGATCTTGACCAATTATATTCAAGCTAATGGTGAAGGCTCATGGAGATCCTTACCAAAGAATGCAGGATTGTTGAGATGTGGGAAGAGTTGTAGATTGAGATGGATTAACTATCTGAGGACAGATTTGAAGAGAGGGAACATCACAACTGAGGAAGAACAGATGATTGTAAAGCTACATAATGTTTTTGGCAACAGGTGGTCTTTGATAGCGGGACATTTACCTGGCCGGACAGACAACGAAATAAAGAACTATTGGAACTCTCATCTAAGTCGAAGAATCTACACAATGACACGACTTTCTGCTAAGTCGTCTTCACCCATAACTGGCATCCTTGACATTACTCCTGCATCGAAGCGAAAGCGAAACATTAGCAAAAGTGCCCAACAACAAGCTGCTACTGTCAAAATGAAAACAACTGAGAAAGAAAAAGTAGAAAAAGGGTTGAGCTCGGAAGAGGATGATAAAGAAGATGAAGATGGATTGGGAAATAGTAGAGTAGTATTGAATGATGGAGGTGAAGAGGACTTGGGACCATATGATTGGCTAGATGGTGAAATAATGAGACTGAATAATGAAATTATTGAATGGGGAATGGGGGAGTCAAGAGGCAATAATAACAATGGATGCAATGAGAAAGTGAGATGTACTGAAGATCATAATCATAATTATGGTTCTAATTGTTCTTCTTCAGTGAATTCAGCTTTGGAAATGGATCAATGGTTGAATTGGGATTGGGATCATCAAGATAATGGATCAATGGAAGGATGTAGTTTGGATCAATGGGAACTTGAGGAAATTTCATCTTGG MVRAPCCEKVGLKRGRWTAEEDEILTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITTEEEQMIVKLHNVFGNRWSLIAGHLPGRTDNEIKNYWNSHLSRRIYTMTRLSAKSSSPITGILDITPASKRKRNISKSAQQQAATVKMKTTEKEKVEKGLSSEEDDKEDEDGLGNSRVVLNDGGEEDLGPYDWLDGEIMRLNNEIIEWGMGESRGNNNNGCNEKVRCTEDHNHNYGSNCSSSVNSALEMDQWLNWDWDHQDNGSMEGCSLDQWELEEISSW
BLAST of Cucsa.252700 vs. Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 5.7e-62 Identity = 124/242 (51.24%), Postives = 162/242 (66.94%), Query Frame = 1
BLAST of Cucsa.252700 vs. Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.8e-55 Identity = 98/121 (80.99%), Postives = 107/121 (88.43%), Query Frame = 1
BLAST of Cucsa.252700 vs. Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.7e-48 Identity = 96/200 (48.00%), Postives = 130/200 (65.00%), Query Frame = 1
BLAST of Cucsa.252700 vs. Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 3.6e-48 Identity = 94/178 (52.81%), Postives = 115/178 (64.61%), Query Frame = 1
BLAST of Cucsa.252700 vs. Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.4e-47 Identity = 95/188 (50.53%), Postives = 123/188 (65.43%), Query Frame = 1
BLAST of Cucsa.252700 vs. TrEMBL
Match: A0A0A0LAP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165680 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 2.0e-98 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Cucsa.252700 vs. TrEMBL
Match: V4KY70_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10004518mg PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.6e-66 Identity = 149/279 (53.41%), Postives = 179/279 (64.16%), Query Frame = 1
BLAST of Cucsa.252700 vs. TrEMBL
Match: G7JMQ7_MEDTR (Myb transcription factor OS=Medicago truncatula GN=MTR_4g121460 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 3.5e-66 Identity = 153/324 (47.22%), Postives = 195/324 (60.19%), Query Frame = 1
BLAST of Cucsa.252700 vs. TrEMBL
Match: D7MNR3_ARALL (AtMYB111 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_917913 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.5e-64 Identity = 127/216 (58.80%), Postives = 152/216 (70.37%), Query Frame = 1
BLAST of Cucsa.252700 vs. TrEMBL
Match: A0A087G9N0_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G267200 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 3.2e-64 Identity = 134/246 (54.47%), Postives = 158/246 (64.23%), Query Frame = 1
BLAST of Cucsa.252700 vs. TAIR10
Match: AT5G49330.1 (AT5G49330.1 myb domain protein 111) HSP 1 Score: 249.2 bits (635), Expect = 3.1e-66 Identity = 129/227 (56.83%), Postives = 156/227 (68.72%), Query Frame = 1
BLAST of Cucsa.252700 vs. TAIR10
Match: AT2G47460.1 (AT2G47460.1 myb domain protein 12) HSP 1 Score: 239.2 bits (609), Expect = 3.2e-63 Identity = 124/242 (51.24%), Postives = 162/242 (66.94%), Query Frame = 1
BLAST of Cucsa.252700 vs. TAIR10
Match: AT3G62610.1 (AT3G62610.1 myb domain protein 11) HSP 1 Score: 211.8 bits (538), Expect = 5.5e-55 Identity = 117/217 (53.92%), Postives = 141/217 (64.98%), Query Frame = 1
BLAST of Cucsa.252700 vs. TAIR10
Match: AT1G35515.1 (AT1G35515.1 high response to osmotic stress 10) HSP 1 Score: 193.4 bits (490), Expect = 2.0e-49 Identity = 99/180 (55.00%), Postives = 125/180 (69.44%), Query Frame = 1
BLAST of Cucsa.252700 vs. TAIR10
Match: AT4G38620.1 (AT4G38620.1 myb domain protein 4) HSP 1 Score: 191.4 bits (485), Expect = 7.7e-49 Identity = 95/188 (50.53%), Postives = 123/188 (65.43%), Query Frame = 1
BLAST of Cucsa.252700 vs. NCBI nr
Match: gi|449433427|ref|XP_004134499.1| (PREDICTED: myb-related protein 308 [Cucumis sativus]) HSP 1 Score: 616.7 bits (1589), Expect = 2.1e-173 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1
BLAST of Cucsa.252700 vs. NCBI nr
Match: gi|659076904|ref|XP_008438925.1| (PREDICTED: LOW QUALITY PROTEIN: transcription factor MYB12 [Cucumis melo]) HSP 1 Score: 560.5 bits (1443), Expect = 1.8e-156 Identity = 269/293 (91.81%), Postives = 283/293 (96.59%), Query Frame = 1
BLAST of Cucsa.252700 vs. NCBI nr
Match: gi|700202018|gb|KGN57151.1| (hypothetical protein Csa_3G165680 [Cucumis sativus]) HSP 1 Score: 367.1 bits (941), Expect = 2.9e-98 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Cucsa.252700 vs. NCBI nr
Match: gi|1021476749|ref|XP_016172314.1| (PREDICTED: transcription factor MYB12 [Arachis ipaensis]) HSP 1 Score: 268.5 bits (685), Expect = 1.4e-68 Identity = 151/307 (49.19%), Postives = 198/307 (64.50%), Query Frame = 1
BLAST of Cucsa.252700 vs. NCBI nr
Match: gi|1012003584|ref|XP_015938283.1| (PREDICTED: transcription factor MYB12 [Arachis duranensis]) HSP 1 Score: 262.7 bits (670), Expect = 7.7e-67 Identity = 150/300 (50.00%), Postives = 194/300 (64.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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