Cucsa.249070 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAACTCATTTTTTTCTTTTtCTTTTTTtAATATGTTCTTGGTGTGGTGTACTAGACAAGGTGGGGGAAAACGATGGGGGTTTTGCTGTTTGTTTCTCGGGGAATTGACTGGGAAAATTACAAGGGTTTGGTTGGTGAGAGATTCGTGGCTTAGCTACATGGGCTGTCTACTTCTTTTTCTTTCATTATTTTAAAATATTATGATTCGCTTTGTAATTCTGATGTTGATGTTTTATTTCTTTCTATCTATTTATCTTTCGTTTTATTTCTAAATTATGGAGTACAATGGCTTCTTCTAATTTTtGGTCGGTGTAATTTTGAAAACGTCTATTTCAATCAATCTACTTTTTAAGAGTATGTATTGTTTTAAATGAAAGTTATAGTACCAAGTGAAGGACTTGAGAATATATATTAATTTCACACTAATTAACACAAATTCCAAATTAATAATTGTGCCATTTGATTTTTTTtAGTCCAAGTTTTTACGATGTTTATATGTACTTTAATTTGACAGCAAAGCCATTGATGGGTAAGCAAGGAAGAATTATATTAGTTCAATTGAGTTGCATATTAACTATATATTTTTTAAGGTTAATGTTTGATTATTTGGTTTTATGCTTGAGATTATTATTATAATTTAATTTATACATGATTCATCTTACAATTTGACTATTTTCTCCTTTATTATAAAATTAAGCAAAAAAAaaTATTAATATCATAAGGTGCATAATTTCACCGACTACAAATTTAAGTATCCTCTCGAGTAGAGGAAAATTGGAAATAATTGGGTTTATATATATATATATAAATGTTATTATGAACGAAATAATAAAGAAATATAAATGTTTGTTGTAATAGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGTAAGTCTTCAAAAAGTTCGTGTGCATCCACTCCATCAAGTGGGACCCTAACGAGCGACTATCACACATCGTCCGTTGATCTGTCCCCAAAAAGCCTGGAGAAGCACTGTCGTCCGATCAACCACGTCGTCAAAGTCGCTGAACTCAAAGGAAGCCTCGTTGAGAGAATGGATAATCTCGAGGATAGAGTCCTCAAGGTAGAAAAAATAATTAATTATTAGAATATTGTTGATAGATTTATGCATTAATTCATTCATATTGCTATGCTGTTAATACTCTCTTCTGACATGGAGTGGAACTTTTTGAAACAGCTTTGTATACAAGTAGAGGGAGATTTAGAAAGGGAGAAGGATATGATAATGGTCGAGAAGAAGGAGAGGAAACCCAAGAGAAGCTTTAAACAACTTGTTCAACGGTGCATGACTGGGCAGGGAACAAGACGCGACTCGTGGTCTTGATCTTGACCATGTTTGTTTATTCGTTTTtCTTGTTTGTAGGACTTAATTTTCTTTTTAGTACGTAATTTCTTGAGTTG ATGGTTAACTCATTTTTTTCTTTTTCTTTTTTTAATATGTTCTTGGTGTGGTGTACTAGACAAGGTGGGGGAAAACGATGGGGGTTTTGCTGTTTGTTTCTCGGGGAATTGACTGGGAAAATTACAAGGGTTTGGTTGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGTAAGTCTTCAAAAAGTTCGTGTGCATCCACTCCATCAAGTGGGACCCTAACGAGCGACTATCACACATCGTCCGTTGATCTGTCCCCAAAAAGCCTGGAGAAGCACTGTCGTCCGATCAACCACGTCGTCAAAGTCGCTGAACTCAAAGGAAGCCTCGTTGAGAGAATGGATAATCTCGAGGATAGAGTCCTCAAGCTTTGTATACAAGTAGAGGGAGATTTAGAAAGGGAGAAGGATATGATAATGGTCGAGAAGAAGGAGAGGAAACCCAAGAGAAGCTTTAAACAACTTGTTCAACGGTGCATGACTGGGCAGGGAACAAGACGCGACTCGTGGTCTTGATCTTGACCATGTTTGTTTATTCGTTTTTCTTGTTTGTAGGACTTAATTTTCTTTTTAGTACGTAATTTCTTGAGTTG ATGGTTAACTCATTTTTTTCTTTTtCTTTTTTtAATATGTTCTTGGTGTGGTGTACTAGACAAGGTGGGGGAAAACGATGGGGGTTTTGCTGTTTGTTTCTCGGGGAATTGACTGGGAAAATTACAAGGGTTTGGTTGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGTAAGTCTTCAAAAAGTTCGTGTGCATCCACTCCATCAAGTGGGACCCTAACGAGCGACTATCACACATCGTCCGTTGATCTGTCCCCAAAAAGCCTGGAGAAGCACTGTCGTCCGATCAACCACGTCGTCAAAGTCGCTGAACTCAAAGGAAGCCTCGTTGAGAGAATGGATAATCTCGAGGATAGAGTCCTCAAGCTTTGTATACAAGTAGAGGGAGATTTAGAAAGGGAGAAGGATATGATAATGGTCGAGAAGAAGGAGAGGAAACCCAAGAGAAGCTTTAAACAACTTGTTCAACGGTGCATGACTGGGCAGGGAACAAGACGCGACTCGTGGTCTTGA MVNSFFSFSFFNMFLVWCTRQGGGKRWGFCCLFLGELTGKITRVWLLRRLEEIRGCGKSSKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPINHVVKVAELKGSLVERMDNLEDRVLKLCIQVEGDLEREKDMIMVEKKERKPKRSFKQLVQRCMTGQGTRRDSWS*
BLAST of Cucsa.249070 vs. TrEMBL
Match: A0A0A0LCD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G695850 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 2.7e-63 Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 1
BLAST of Cucsa.249070 vs. TrEMBL
Match: A0A061DWD6_THECC (Cellulose synthase OS=Theobroma cacao GN=TCM_005879 PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.2e-30 Identity = 68/121 (56.20%), Postives = 93/121 (76.86%), Query Frame = 1
BLAST of Cucsa.249070 vs. TrEMBL
Match: B9T1P6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0493230 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 5.8e-29 Identity = 67/117 (57.26%), Postives = 88/117 (75.21%), Query Frame = 1
BLAST of Cucsa.249070 vs. TrEMBL
Match: D7T306_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g00910 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 8.3e-28 Identity = 74/119 (62.18%), Postives = 88/119 (73.95%), Query Frame = 1
BLAST of Cucsa.249070 vs. TrEMBL
Match: A0A0R0GRF8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G202600 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.4e-27 Identity = 66/118 (55.93%), Postives = 87/118 (73.73%), Query Frame = 1
BLAST of Cucsa.249070 vs. TAIR10
Match: AT1G07985.1 (AT1G07985.1 Expressed protein) HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16 Identity = 52/118 (44.07%), Postives = 78/118 (66.10%), Query Frame = 1
BLAST of Cucsa.249070 vs. NCBI nr
Match: gi|449466687|ref|XP_004151057.1| (PREDICTED: uncharacterized protein LOC101205386 [Cucumis sativus]) HSP 1 Score: 249.6 bits (636), Expect = 3.9e-63 Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 1
BLAST of Cucsa.249070 vs. NCBI nr
Match: gi|659123713|ref|XP_008461800.1| (PREDICTED: uncharacterized protein LOC103500315 [Cucumis melo]) HSP 1 Score: 228.8 bits (582), Expect = 7.2e-57 Identity = 111/126 (88.10%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of Cucsa.249070 vs. NCBI nr
Match: gi|1009129323|ref|XP_015881704.1| (PREDICTED: uncharacterized protein LOC107417610 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 141.0 bits (354), Expect = 2.0e-30 Identity = 75/121 (61.98%), Postives = 94/121 (77.69%), Query Frame = 1
BLAST of Cucsa.249070 vs. NCBI nr
Match: gi|590724636|ref|XP_007052525.1| (Cellulose synthase family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 139.0 bits (349), Expect = 7.5e-30 Identity = 68/121 (56.20%), Postives = 93/121 (76.86%), Query Frame = 1
BLAST of Cucsa.249070 vs. NCBI nr
Match: gi|255582779|ref|XP_002532165.1| (PREDICTED: uncharacterized protein LOC8271835 isoform X1 [Ricinus communis]) HSP 1 Score: 135.6 bits (340), Expect = 8.3e-29 Identity = 67/117 (57.26%), Postives = 88/117 (75.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |