Cucsa.242730 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.242730
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Seed maturation protein LEA 4
Location	scaffold02047 : 2404682 .. 2405415 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATCGGGAAGAAACGCGGCGGAGGCGATGAAGGAATCGGCTGCCAACGTGGGAGCCTCTGCCAAAGCTGGCATGGAAAAAaCCAAAGCCACCGCTCAAGAAAAGGTTTTGAGTTTTTTTtCTTGAAGAAAAAaCTTTTTtCTTTTATTTATTAACTTGCAAGTTGCACACGTGTTTGGTCGATTTGGTCGGTTTCTTTATTTATTAATTTTTTtATTGACATTTCTTTTTATTTATTTAAACTTCTAATATTTTtGGGAACTCTAGTATTTAGGGAGAACTAGAGAGGTGAAGTTATCAAAGTTGaGATTAAAAAAAaTCAATGAATTAATTAATTGAATAAGGAAGTAATAATTGTAATCTTTTTGAGGACATTGACGAGAAAGGAAGGGTGGCCGGTGTTGTACAAAGGCTTTTTTTtAATAAAAACACGTGGCACGTGGTAAAATAAATATAATAATATAGAATGAATAATCACGTAAATAAATTTAAATAGAAAAGAATTGTAATGTGAATTACATTTCCACGCGTGCAAATGCCAGGTGGACAAAATGCGGGCCCACGATCCATTTGAGAAAGACATGGCGAGAGAAAGGAAAGACGAGAGGATTCAGGAGGCTGAGCTGGACAAGCAGCAGGCACGTGTAGAACACGCAGCAGAGAGACAGACCGGTACAGGACCCGGGACCCGTACCGGTTTGGGAACCGGTACCCACACCTACGACCCGACC

mRNA sequence

ATGCAATCGGGAAGAAACGCGGCGGAGGCGATGAAGGAATCGGCTGCCAACGTGGGAGCCTCTGCCAAAGCTGGCATGGAAAAAACCAAAGCCACCGCTCAAGAAAAGGTGGACAAAATGCGGGCCCACGATCCATTTGAGAAAGACATGGCGAGAGAAAGGAAAGACGAGAGGATTCAGGAGGCTGAGCTGGACAAGCAGCAGGCACGTGTAGAACACGCAGCAGAGAGACAGACCGGTACAGGACCCGGGACCCGTACCGGTTTGGGAACCGGTACCCACACCTACGACCCGACC

Coding sequence (CDS)

ATGCAATCGGGAAGAAACGCGGCGGAGGCGATGAAGGAATCGGCTGCCAACGTGGGAGCCTCTGCCAAAGCTGGCATGGAAAAAaCCAAAGCCACCGCTCAAGAAAAGGTGGACAAAATGCGGGCCCACGATCCATTTGAGAAAGACATGGCGAGAGAAAGGAAAGACGAGAGGATTCAGGAGGCTGAGCTGGACAAGCAGCAGGCACGTGTAGAACACGCAGCAGAGAGACAGACCGGTACAGGACCCGGGACCCGTACCGGTTTGGGAACCGGTACCCACACCTACGACCCGACC

Protein sequence

MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT

Homology

[Close]

BLAST of Cucsa.242730 vs. Swiss-Prot
Match: LEA11_HELAN (11 kDa late embryogenesis abundant protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-26
Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSG+NAA + KE+AANV ASAKAGMEKTKA+ QEK +KM AHDP +K+MARE+K+ER  
Sbjct: 1   MQSGKNAAASAKETAANVAASAKAGMEKTKASLQEKGEKMTAHDPMQKEMAREKKEERKH 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 100
           EAE +KQ A+  +AA++QT       TG+GTGTH+Y  T
Sbjct: 61  EAEYEKQAAKEHNAAQKQT-------TGIGTGTHSYTTT 92

[Close]

BLAST of Cucsa.242730 vs. Swiss-Prot
Match: PM1_SOYBN (18 kDa seed maturation protein OS=Glycine max GN=GMPM1 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.1e-23
Identity = 54/105 (51.43%), Postives = 73/105 (69.52%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQ G+ A E++KE+A N+GASAKAGMEKTKAT QEK ++M A DP +K++A ++K+ ++ 
Sbjct: 1   MQGGKKAGESIKETATNIGASAKAGMEKTKATVQEKAERMTARDPVQKELATQKKEAKMN 60

Query: 61  EAELDKQQARVEHAAERQTGTGPG------TRTGLGTGTHTYDPT 100
           +AELDKQ AR  + A +Q+ T  G        TG GTGT TY  T
Sbjct: 61  QAELDKQAARQHNTAAKQSATTAGHMGHGHHTTGTGTGTATYSTT 105

[Close]

BLAST of Cucsa.242730 vs. Swiss-Prot
Match: LE25_SOLLC (Protein LE25 OS=Solanum lycopersicum GN=LE25 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-15
Identity = 47/98 (47.96%), Postives = 65/98 (66.33%), Query Frame = 1


Query: 1  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
          MQ+G++AA           ++AKAGMEKTKA  QEK ++M   DP +K+MA E+K++R+ 
Sbjct: 1  MQTGKDAA-----------SAAKAGMEKTKANVQEKAERMTTRDPLKKEMATEKKEDRVA 60

Query: 61 EAELDKQQARVEHAAERQ--TGTGPGTRTGLG-TGTHT 96
           AE+ K+ A+ +HAAE+Q    TG GT TG G TG HT
Sbjct: 61 AAEMGKRDAKAQHAAEKQGAATTGTGT-TGYGATGNHT 86

[Close]

BLAST of Cucsa.242730 vs. Swiss-Prot
Match: LEA13_GOSHI (Late embryogenesis abundant protein D-113 OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 6.7e-15
Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 1


Query: 9   EAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQ 68
           ++MK++A    ASAKAGMEK KA+ QEKVD+M+  DP EK+MARERK+ER ++AEL KQ+
Sbjct: 2   QSMKDAA----ASAKAGMEKAKASMQEKVDQMKTRDPNEKEMARERKEERQEDAELRKQE 61

Query: 69  ARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 100
           AR  +A     G G    TG  T  +    T
Sbjct: 62  ARHHNATAGHVGGGGIGGTGYTTAGYNIGDT 88

[Close]

BLAST of Cucsa.242730 vs. TrEMBL
Match: A0A0A0LBV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G808370 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.5e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ
Sbjct: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 100
           EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT
Sbjct: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 99

[Close]

BLAST of Cucsa.242730 vs. TrEMBL
Match: A0A103XPZ6_CYNCS (Late embryogenesis abundant protein, LEA-25/LEA-D113 OS=Cynara cardunculus var. scolymus GN=Ccrd_003231 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.2e-24
Identity = 63/99 (63.64%), Postives = 76/99 (76.77%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQ+G+NAA ++KESAAN+ ASAKAGMEKTKAT QEK +KM AHDP +K+MARE+KDER  
Sbjct: 1   MQTGKNAAASVKESAANMAASAKAGMEKTKATMQEKGEKMTAHDPMQKEMAREKKDERKH 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 100
           EAE +KQ AR ++AA+RQ     GT     TGTHTY  T
Sbjct: 61  EAEYEKQAAREQNAAQRQAA---GT-----TGTHTYSTT 91

[Close]

BLAST of Cucsa.242730 vs. TrEMBL
Match: A0A059A421_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_K01836 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.2e-24
Identity = 67/109 (61.47%), Postives = 77/109 (70.64%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQ  +NAA + KE+AANVGASAKAGMEKTKA AQEK++KM AHDP EK MA E+K ERI 
Sbjct: 6   MQPMKNAAASAKEAAANVGASAKAGMEKTKAVAQEKMEKMTAHDPVEKQMATEKKHERID 65

Query: 61  EAELDKQQARVEHAAERQ----------TGTGPGTRTGLGTGTHTYDPT 100
           +AEL+KQ AR E+AA +Q          T TGPGT T  GT T TY  T
Sbjct: 66  QAELNKQMAREENAASKQSTAATGHLANTTTGPGTTTTTGT-TATYSTT 113

[Close]

BLAST of Cucsa.242730 vs. TrEMBL
Match: M5VR95_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012476mg PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-23
Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSG+N   ++KE+AANV ASAK+GM+KTKAT QEKV+KM AHDP EKDMA ++++ER+ 
Sbjct: 1   MQSGKNVKGSVKETAANVAASAKSGMDKTKATVQEKVEKMTAHDPVEKDMATQKREERMV 60

Query: 61  EAELDKQQARVEHAAERQTGT--GPGTRTGLGTGTHTYDPT 100
           EAEL+K  A+  +A  R   +  GP   T  GTGTHTY PT
Sbjct: 61  EAELNKCAAKAHNATARHEASVGGPTGYTTSGTGTHTYSPT 101

[Close]

BLAST of Cucsa.242730 vs. TrEMBL
Match: A0A103YMX2_CYNCS (Late embryogenesis abundant protein, LEA-25/LEA-D113 (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_009534 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-22
Identity = 58/99 (58.59%), Postives = 75/99 (75.76%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQS +NAA ++KESAAN+ ASAKAGM+KTKAT QEK ++M AHDP +K+MA E+K+ R  
Sbjct: 1   MQSAKNAAASVKESAANMAASAKAGMDKTKATMQEKGERMTAHDPMQKEMATEKKEARKN 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 100
           +AE +KQ AR ++A +RQ  T   T TG GTGTH+Y  T
Sbjct: 61  QAEYEKQVARDQNAVQRQ-ATEATTGTGTGTGTHSYSTT 98

[Close]

BLAST of Cucsa.242730 vs. TAIR10
Match: AT5G06760.1 (AT5G06760.1 Late Embryogenesis Abundant 4-5)

HSP 1 Score: 91.7 bits (226), Expect = 2.8e-19
Identity = 42/87 (48.28%), Postives = 64/87 (73.56%), Query Frame = 1


Query: 9  EAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQ 68
          ++MKE+A+N+ ASAK+GM+KTKAT +EK +KM+  DP +K MA + K+++I +AE+ K++
Sbjct: 2  QSMKETASNIAASAKSGMDKTKATLEEKAEKMKTRDPVQKQMATQVKEDKINQAEMQKRE 61

Query: 69 ARVEHAAERQTGTGPGTRTGLGTGTHT 96
           R +H A  +   G GT  GLGT TH+
Sbjct: 62 TR-QHNAAMKEAAGAGTGLGLGTATHS 87

[Close]

BLAST of Cucsa.242730 vs. NCBI nr
Match: gi|700204175|gb|KGN59308.1| (hypothetical protein Csa_3G808370 [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 3.5e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ
Sbjct: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 100
           EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT
Sbjct: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 99

[Close]

BLAST of Cucsa.242730 vs. NCBI nr
Match: gi|1170744|sp|P46515.1|LEA11_HELAN (RecName: Full=11 kDa late embryogenesis abundant protein; AltName: Full=DS11 [Helianthus annuus])

HSP 1 Score: 119.8 bits (299), Expect = 2.7e-24
Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSG+NAA + KE+AANV ASAKAGMEKTKA+ QEK +KM AHDP +K+MARE+K+ER  
Sbjct: 1   MQSGKNAAASAKETAANVAASAKAGMEKTKASLQEKGEKMTAHDPMQKEMAREKKEERKH 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 100
           EAE +KQ A+  +AA++QT       TG+GTGTH+Y  T
Sbjct: 61  EAEYEKQAAKEHNAAQKQT-------TGIGTGTHSYTTT 92

[Close]

BLAST of Cucsa.242730 vs. NCBI nr
Match: gi|694402243|ref|XP_009376127.1| (PREDICTED: 18 kDa seed maturation protein-like [Pyrus x bretschneideri])

HSP 1 Score: 118.2 bits (295), Expect = 7.9e-24
Identity = 59/101 (58.42%), Postives = 77/101 (76.24%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSG+NA E++KE+AAN+ ASA +GMEKTK T QEKV+KM++ DP EKDMA  +K+ERI 
Sbjct: 1   MQSGKNAMESIKEAAANIAASANSGMEKTKPTVQEKVEKMKSSDPIEKDMAAGKKEERIV 60

Query: 61  EAELDKQQARVEHAAERQTGTGPG--TRTGLGTGTHTYDPT 100
           +AE++K+ A  ++AA R+ G G    T TG GTGTHTY  T
Sbjct: 61  DAEINKRNAMEQNAAARRDGAGATGYTATGAGTGTHTYSTT 101

[Close]

BLAST of Cucsa.242730 vs. NCBI nr
Match: gi|976907336|gb|KVH94708.1| (Late embryogenesis abundant protein, LEA-25/LEA-D113 [Cynara cardunculus var. scolymus])

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-23
Identity = 63/99 (63.64%), Postives = 76/99 (76.77%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQ+G+NAA ++KESAAN+ ASAKAGMEKTKAT QEK +KM AHDP +K+MARE+KDER  
Sbjct: 1   MQTGKNAAASVKESAANMAASAKAGMEKTKATMQEKGEKMTAHDPMQKEMAREKKDERKH 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 100
           EAE +KQ AR ++AA+RQ     GT     TGTHTY  T
Sbjct: 61  EAEYEKQAAREQNAAQRQAA---GT-----TGTHTYSTT 91

[Close]

BLAST of Cucsa.242730 vs. NCBI nr
Match: gi|629081655|gb|KCW48100.1| (hypothetical protein EUGRSUZ_K01836, partial [Eucalyptus grandis])

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-23
Identity = 67/109 (61.47%), Postives = 77/109 (70.64%), Query Frame = 1


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQ  +NAA + KE+AANVGASAKAGMEKTKA AQEK++KM AHDP EK MA E+K ERI 
Sbjct: 6   MQPMKNAAASAKEAAANVGASAKAGMEKTKAVAQEKMEKMTAHDPVEKQMATEKKHERID 65

Query: 61  EAELDKQQARVEHAAERQ----------TGTGPGTRTGLGTGTHTYDPT 100
           +AEL+KQ AR E+AA +Q          T TGPGT T  GT T TY  T
Sbjct: 66  QAELNKQMAREENAASKQSTAATGHLANTTTGPGTTTTTGT-TATYSTT 113

The following BLAST results are available for this feature:

BLAST of Cucsa.242730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LEA11_HELAN	1.7e-26	61.62	11 kDa late embryogenesis abundant protein OS=Helianthus annuus PE=2 SV=1	[more]
PM1_SOYBN	5.1e-23	51.43	18 kDa seed maturation protein OS=Glycine max GN=GMPM1 PE=2 SV=1	[more]
LE25_SOLLC	1.8e-15	47.96	Protein LE25 OS=Solanum lycopersicum GN=LE25 PE=2 SV=1	[more]
LEA13_GOSHI	6.7e-15	50.55	Late embryogenesis abundant protein D-113 OS=Gossypium hirsutum PE=2 SV=2	[more]

BLAST of Cucsa.242730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBV1_CUCSA	2.5e-48	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G808370 PE=4 SV=1	[more]
A0A103XPZ6_CYNCS	7.2e-24	63.64	Late embryogenesis abundant protein, LEA-25/LEA-D113 OS=Cynara cardunculus var. ...	[more]
A0A059A421_EUCGR	7.2e-24	61.47	Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_K01836 PE=4 ...	[more]
M5VR95_PRUPE	2.1e-23	58.42	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012476mg PE=4 SV=1	[more]
A0A103YMX2_CYNCS	1.8e-22	58.59	Late embryogenesis abundant protein, LEA-25/LEA-D113 (Fragment) OS=Cynara cardun...	[more]

BLAST of Cucsa.242730 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06760.1	2.8e-19	48.28	Late Embryogenesis Abundant 4-5	[more]

BLAST of Cucsa.242730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700204175\|gb\|KGN59308.1\|	3.5e-48	100.00	hypothetical protein Csa_3G808370 [Cucumis sativus]	[more]
gi\|1170744\|sp\|P46515.1\|LEA11_HELAN	2.7e-24	61.62	RecName: Full=11 kDa late embryogenesis abundant protein; AltName: Full=DS11 [He...	[more]
gi\|694402243\|ref\|XP_009376127.1\|	7.9e-24	58.42	PREDICTED: 18 kDa seed maturation protein-like [Pyrus x bretschneideri]	[more]
gi\|976907336\|gb\|KVH94708.1\|	1.0e-23	63.64	Late embryogenesis abundant protein, LEA-25/LEA-D113 [Cynara cardunculus var. sc...	[more]
gi\|629081655\|gb\|KCW48100.1\|	1.0e-23	61.47	hypothetical protein EUGRSUZ_K01836, partial [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005513	LEA_1

Vocabulary: **Biological Process**
Term	Definition
GO:0009790	embryo development

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009790	embryo development
biological_process	GO:0009409	response to cold
biological_process	GO:0006970	response to osmotic stress
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0048316	seed development
biological_process	GO:0009793	embryo development ending in seed dormancy
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.242730.1	Cucsa.242730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005513	Late embryogenesis abundant protein, LEA-25/LEA-D113	PRODOM	PD005538		coord: 10..78 score: 1.0
IPR005513	Late embryogenesis abundant protein, LEA-25/LEA-D113	PFAM	PF03760	LEA_1	coord: 9..78 score: 8.9
None	No IPR available	unknown	Coil	Coil	coord: 52..79 scor
None	No IPR available	PANTHER	PTHR33493	FAMILY NOT NAMED	coord: 2..99 score: 1.1
None	No IPR available	PANTHER	PTHR33493:SF2	LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5	coord: 2..99 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.242730	Cla017538	Watermelon (97103) v1	cgywmB456
Cucsa.242730	Csa3G808370	Cucumber (Chinese Long) v2	cgycuB344
Cucsa.242730	MELO3C009631	Melon (DHL92) v3.5.1	cgymeB412
Cucsa.242730	ClCG10G017480	Watermelon (Charleston Gray)	cgywcgB426
Cucsa.242730	CSPI03G36530	Wild cucumber (PI 183967)	cgycpiB360
Cucsa.242730	CmaCh06G000950	Cucurbita maxima (Rimu)	cgycmaB0682
Cucsa.242730	CmoCh06G000880	Cucurbita moschata (Rifu)	cgycmoB0682
Cucsa.242730	Lsi03G017300	Bottle gourd (USVL1VR-Ls)	cgylsiB402
Cucsa.242730	Cp4.1LG08g13920	Cucurbita pepo (Zucchini)	cgycpeB0651
Cucsa.242730	MELO3C009631.2	Melon (DHL92) v3.6.1	cgymedB408
Cucsa.242730	CsaV3_3G038880	Cucumber (Chinese Long) v3	cgycucB363
Cucsa.242730	Cla97C10G200330	Watermelon (97103) v2	cgywmbB425
Cucsa.242730	Bhi11G002192	Wax gourd	cgywgoB482
Cucsa.242730	Carg01227	Silver-seed gourd	carcgyB0195

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.242730	Silver-seed gourd	carcgyB0294
Cucsa.242730	Cucumber (Chinese Long) v3	cgycucB364
Cucsa.242730	Cucumber (Gy14) v1	cgycgyB011
Cucsa.242730	Cucumber (Gy14) v1	cgycgyB094
Cucsa.242730	Cucurbita maxima (Rimu)	cgycmaB0674
Cucsa.242730	Cucurbita moschata (Rifu)	cgycmoB0675
Cucsa.242730	Wild cucumber (PI 183967)	cgycpiB361
Cucsa.242730	Wild cucumber (PI 183967)	cgycpiB365
Cucsa.242730	Cucumber (Chinese Long) v2	cgycuB345
Cucsa.242730	Cucumber (Chinese Long) v2	cgycuB349
Cucsa.242730	Melon (DHL92) v3.5.1	cgymeB411
Cucsa.242730	Melon (DHL92) v3.5.1	cgymeB413
Cucsa.242730	Watermelon (Charleston Gray)	cgywcgB430
Cucsa.242730	Watermelon (97103) v1	cgywmB460
Cucsa.242730	Cucurbita pepo (Zucchini)	cgycpeB0644