Cucsa.240280 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAACCCCCAAATTCCCCAATATTCTTCTTTCATTTATTGACACCAACCTCTCTCCCTCTCTCTCTCTCTCCCCACTTCCGGTCACCGGAAACCGACTTCCCTCTTTTCCAAGGTTTGATTTCACTTCTCTGTAATAATAGGTTTCGTTTTTTGGTTGTTTGTTGTTTGACCATTCCTGGGATGTTTTTAGCTCAACCCACATACCATATGTGTTTTTTTTTTATTAAGAATTTCGTGGTTTAAATCAACCACTTGTCTTGTACTTCAAAAAAAAGATGTTTTGTTCTTATCTAGGCATTGTTGTCTATTTTAAGTTGCATTTGGATGCATCAGCTATGAGTATTGGGTTTTTTTTCCCCTTTTAATTGTTTATACTTTAGTCTTTGCTTGTCCAAATGAGAGAAAAAAAGGTATTCTGTTGTAGTTATGTATTGACAGTGTTGTAGTTCTAATTTTTTTCTTCAAAGAGAAAAAGGGGCCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAAAAAGGACTGTAGAGATTCTTACAATATGTTTGATTATTATCTAGTAAGTAGGTTGCCCGTTTAAATGCACGTTGTGGATATATGTGAACCAATGGTTCTCGAATTAGGAACTATTGGGCACCAATCACGCGTACCCCACCTCTATATATTAAAGATAAACGGCATCGTGCTACACACTCGAGTTTTTACTACTATTTTCGGGTGTGGCAGTCACATTGTAGCAATCTTTATTGAATAATCTTCCCATTTGATATCTTAATCTATCGAGTCTAGCATACAAGGTGCGTATGTGATCATTTTGCAGCATTATGATATGTTACTAAACACATTGTTAATGATCCCAATGAGATCAGTGTACTGTCAATGGCTTGAGTTTAGTTTGTATTCTTGAAAAACCATAGATCTCAATTTTTTTTTAAAACAATCTCATAAGCTTTAATGATGAGAAAGAAGGTGCCAAAGCTGAGTGATTACACTTTTAAATTATCTTAGAAATAGGGATGCAGATTGAAATCCTAATGATAAGTTTCATATTGCTCATGTTTGATCCTCAGGTTTCAACAATAAGTTATACAAAAGAATAATGGTTGCTGATCTCTTTTCGTTGTTTTCATCAACGTCCATAAATGTTTTGGTAATTGTTCTGCAGGTCGAAACTATGTGAATGTTCTCCTCATTTCGCCCCAAAACATGAAGTATATATCAGAGAAGGGATGGAACTCTATCATACCTCTCCATTTGAGAAGCGAATCGGGTTCTCACTTTTGCATCTTTTCAAGAGCAAAGGGATCAAGATATGGTCCGGGCAACACTCCAGTATATCTCAATGTGTATGACTTGACAACAGTAAATGGCTGCGTTTACTGGGCAGGTGTTGGCATATTTCATTCTGGGATTCAAGGTTTGTTGGCTTGTTTCTTGTAGCATGCATTGTTTTTGGGTGAGGATGATGCTAACTAAAATTTGCTACGAACAAATGGTAATTTCCGTCTGCATGCATTGTGGAGAATAGGCATCTTGAAGTTGCAATCTCTTTTTGTGCTCGTATCTGTTAAATTGAAAATAATCACCCATATAACATCGATAAGCTTGTCGAATAAATTCAAGGTATGGAAGAATGAAAAGGGTTTTGGAAACAGGACCATGGACACTAGAACAAAAGATTTATTTGCCATTTACATGTCTTATCTAAAAGGGGAAGGAAAATGCAATTGAGATACACAAAAATGGTTCTGCCTTTTTTTGCATTTTGATTTTGCAATGGCAGGGTGGTTACTCTTGTTTAGAAACTTTTATTTGGACTATTTCCTCCCAAGTAAAGCTTCTGGTCCGAAATGAAATATCCTTTGGAGAATGCACCACTAGAACTAGAGCTCTTTTGTTGTATATTTGGAACGAAAGAAATAGTAGAATTTTTAAAGATAATTTTGATTCTTTTTGGACTGTGGTTCAGCATCATCGTACACAACTACGTCAAACACTTTCGTAATTATAATCTTTCTATTTTTAACAAATGGAAGGTCCTTATTCACTTGTGTTTCTTCTGGGGGAAGGTCTCCCTGACCCTTGCGCTTAAGTTGTCTTCTTTTGTTCTCGTGGATATAATCATCTGTTCCTTATTTAAATAAAAGTGTCTTAAAACATTGTTTCAAAATGAAAAATTGAGTCCAAGATTACCGAGTTTATAGTAGGAAAACTACCTCTTTTGCGTTTTACTGACTCAAGCTGCCTTTACCTTCATTCAAGGAAGTATTTAGACAGGGTGATGCATTCTTTTAACTGAATATTTCATGACGATGATTGTTATTTCTAATTTCCATTTAATTCACTTACAGTTCATGGTGTGGAATATGCCTTCGGAGCCCATGACTATCCAACAAGTGGTGTCTTCGAGGTTGAACCTCGACGCTGCCCCGGGTTTAAGTTTAGAAAGTCGATTTTCATGGGTACAACTTGCTTGGATCCTATTCAATTTCGAGAGTTCATGGAGCGCAATTCTGCAAACTACAATGGTGACACGTATCACTTGATTGTAAAAAATTGCAACCATTTTTGTGAGGATATTTGCTATAAGTTAACCGGGAAACACATACCAAAATGGGTGAATCGGCTTGCAAGAATAGGTAACCCAATAGATGTATAAACATCAAGTTTTCTACTTTCTAAAGACTCCTAAACTGTATGTATAAGATTTATATTTTCTTCCAAGATAATATGTTGCATTCATAGGCTTTCATTCTCTTCTCATAGTTATCATCAATACGCCCCCAAATCACTCCCTACATTTTTGTTGTAGGATATTTATGTAATTGCATGCTCCCCAAGGCCCTCAAGACTTCGAGTGTTCCAAATGACTCAAATTTTCAAGGATACGAGAGTGAGAAGAAGCAATTACGAAGTAGTTTTGGCTGCTTCACGTCAATATCAATGCATCAACGAGAAGTTTCAATTTCTTCATTGTTTCTTCACTCGCATTATAAAGGTTGCCTGCCACCATGGGAGATGAAAGGGTCGAGAAGTCGGTCAATGAAGGAAGGGTGACAAACACTCATCTTTACTACTTTGCTGCCATTTTTAATCCAGGTGAGAGAATTCACTTCTGGCAGAAAAGAAGATTCTGTTGATTTATATGTTAAGTTTAGAGATATTCATTGTGCATGCGATAGCACCATAGCAGTTCATAGGAAGTCAAGCAGATTGCATAGTTATTTTTTTCTTGTATATTTAGCCTTTTATGGTTTTGTTATATAGTTTTTTTGGGGGGAAAGGATGAATCAATTTAGGTAGCTTAGTTTATATGCTTCCTCTGTTTTACGTTAGTTTCATTTCTACTTTTACCACAGTTCAATGTTGAAATTTGGGCATATAATGCTATATCAACAGACATTGTACCATTGAAAATACTTCTCGAGTATTATTTTAATAGAGTGGAATCATTGTTGAGAG GAAAACCCCCAAATTCCCCAATATTCTTCTTTCATTTATTGACACCAACctctctccctctctctctctctcCCCACTTCCGGTCACCGGAAACCGACTTCCCTCTTTTCCAAGGTCGAAACTATGTGAATGTTCTCCTCATTTCGCCCCAAAACATGAAGTATATATCAGAGAAGGGATGGAACTCTATCATACCTCTCCATTTGAGAAGCGAATCGGGTTCTCACTTTTGCATCTTTTCAAGAGCAAAGGGATCAAGATATGGTCCGGGCAACACTCCAGTATATCTCAATGTGTATGACTTGACAACAGTAAATGGCTGCGTTTACTGGGCAGGTGTTGGCATATTTCATTCTGGGATTCAAGTTCATGGTGTGGAATATGCCTTCGGAGCCCATGACTATCCAACAAGTGGTGTCTTCGAGGTTGAACCTCGACGCTGCCCCGGGTTTAAGTTTAGAAAGTCGATTTTCATGGGTACAACTTGCTTGGATCCTATTCAATTTCGAGAGTTCATGGAGCGCAATTCTGCAAACTACAATGGTGACACGTATCACTTGATTGTAAAAAATTGCAACCATTTTTGTGAGGATATTTGCTATAAGTTAACCGGGAAACACATACCAAAATGGGTGAATCGGCTTGCAAGAATAGGATATTTATGTAATTGCATGCTCCCCAAGGCCCTCAAGACTTCGAGTGTTCCAAATGACTCAAATTTTCAAGGATACGAGAGTGAGAAGAAGCAATTACGAAGTAGTTTTGGCTGCTTCACGTCAATATCAATGCATCAACGAGAAGTTTCAATTTCTTCATTGTTTCTTCACTCGCATTATAAAGGTTGCCTGCCACCATGGGAGATGAAAGGGTCGAGAAGTCGGTCAATGAAGGAAGGGTGACAAACACTCATCTTTACTACTTTGCTGCCATTTTTAATCCAGGTGAGAGAATTCACTTCTGGCAGAAAAGAAGATTCTGTTGATTTATATGTTAAGTTTAGAGATATTCATTGTGCATGCGATAGCACCATAGCAGTTCATAGGAAGTCAAGCAGATTGCATAGTTATTTTTTTCTTGTATATTTAGCCTTTTATGGTTTTGTTATATAGTTTTTTTGGGGGGAAAGGATGAATCAATTTAGGTAGCTTAGTTTATATGCTTCCTCTGTTTTACGTTAGTTTCATTTCTACTTTTACCACAGTTCAATGTTGAAATTTGGGCATATAATGCTATATCAACAGACATTGTACCATTGAAAATACTTCTCGAGTATTATTTTAATAGAGTGGAATCATTGTTGAGAG ATGAAGTATATATCAGAGAAGGGATGGAACTCTATCATACCTCTCCATTTGAGAAGCGAATCGGGTTCTCACTTTTGCATCTTTTCAAGAGCAAAGGGATCAAGATATGGTCCGGGCAACACTCCAGTATATCTCAATGTGTATGACTTGACAACAGTAAATGGCTGCGTTTACTGGGCAGGTGTTGGCATATTTCATTCTGGGATTCAAGTTCATGGTGTGGAATATGCCTTCGGAGCCCATGACTATCCAACAAGTGGTGTCTTCGAGGTTGAACCTCGACGCTGCCCCGGGTTTAAGTTTAGAAAGTCGATTTTCATGGGTACAACTTGCTTGGATCCTATTCAATTTCGAGAGTTCATGGAGCGCAATTCTGCAAACTACAATGGTGACACGTATCACTTGATTGTAAAAAATTGCAACCATTTTTGTGAGGATATTTGCTATAAGTTAACCGGGAAACACATACCAAAATGGGTGAATCGGCTTGCAAGAATAGGATATTTATGTAATTGCATGCTCCCCAAGGCCCTCAAGACTTCGAGTGTTCCAAATGACTCAAATTTTCAAGGATACGAGAGTGAGAAGAAGCAATTACGAAGTAGTTTTGGCTGCTTCACGTCAATATCAATGCATCAACGAGAAGTTTCAATTTCTTCATTGTTTCTTCACTCGCATTATAAAGGTTGCCTGCCACCATGGGAGATGAAAGGGTCGAGAAGTCGGTCAATGAAGGAAGGGTGA MKYISEKGWNSIIPLHLRSESGSHFCIFSRAKGSRYGPGNTPVYLNVYDLTTVNGCVYWAGVGIFHSGIQVHGVEYAFGAHDYPTSGVFEVEPRRCPGFKFRKSIFMGTTCLDPIQFREFMERNSANYNGDTYHLIVKNCNHFCEDICYKLTGKHIPKWVNRLARIGYLCNCMLPKALKTSSVPNDSNFQGYESEKKQLRSSFGCFTSISMHQREVSISSLFLHSHYKGCLPPWEMKGSRSRSMKEG*
BLAST of Cucsa.240280 vs. Swiss-Prot
Match: PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 4.4e-55 Identity = 90/143 (62.94%), Postives = 116/143 (81.12%), Query Frame = 1
BLAST of Cucsa.240280 vs. Swiss-Prot
Match: DESI2_XENLA (Desumoylating isopeptidase 2 OS=Xenopus laevis GN=desi2 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 6.0e-28 Identity = 68/167 (40.72%), Postives = 95/167 (56.89%), Query Frame = 1
BLAST of Cucsa.240280 vs. Swiss-Prot
Match: DESI2_DANRE (Desumoylating isopeptidase 2 OS=Danio rerio GN=desi2 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.9e-27 Identity = 65/169 (38.46%), Postives = 93/169 (55.03%), Query Frame = 1
BLAST of Cucsa.240280 vs. Swiss-Prot
Match: DESI2_PIG (Desumoylating isopeptidase 2 OS=Sus scrofa GN=DESI2 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.5e-26 Identity = 69/191 (36.13%), Postives = 102/191 (53.40%), Query Frame = 1
BLAST of Cucsa.240280 vs. Swiss-Prot
Match: DESI2_HUMAN (Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.3e-26 Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = 1
BLAST of Cucsa.240280 vs. TrEMBL
Match: A0A0A0K5V2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G253740 PE=4 SV=1) HSP 1 Score: 531.2 bits (1367), Expect = 6.9e-148 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
BLAST of Cucsa.240280 vs. TrEMBL
Match: W9R104_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026945 PE=4 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 9.3e-113 Identity = 185/247 (74.90%), Postives = 217/247 (87.85%), Query Frame = 1
BLAST of Cucsa.240280 vs. TrEMBL
Match: V4SHF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029154mg PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 2.1e-112 Identity = 185/246 (75.20%), Postives = 217/246 (88.21%), Query Frame = 1
BLAST of Cucsa.240280 vs. TrEMBL
Match: A0A067E8D8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025832mg PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 2.1e-112 Identity = 185/246 (75.20%), Postives = 217/246 (88.21%), Query Frame = 1
BLAST of Cucsa.240280 vs. TrEMBL
Match: D7TPY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02130 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 3.0e-111 Identity = 183/247 (74.09%), Postives = 214/247 (86.64%), Query Frame = 1
BLAST of Cucsa.240280 vs. TAIR10
Match: AT1G47740.1 (AT1G47740.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 350.9 bits (899), Expect = 6.4e-97 Identity = 159/245 (64.90%), Postives = 202/245 (82.45%), Query Frame = 1
BLAST of Cucsa.240280 vs. TAIR10
Match: AT5G25170.1 (AT5G25170.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 224.2 bits (570), Expect = 9.1e-59 Identity = 106/203 (52.22%), Postives = 135/203 (66.50%), Query Frame = 1
BLAST of Cucsa.240280 vs. TAIR10
Match: AT1G80690.1 (AT1G80690.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 216.5 bits (550), Expect = 1.9e-56 Identity = 99/189 (52.38%), Postives = 132/189 (69.84%), Query Frame = 1
BLAST of Cucsa.240280 vs. TAIR10
Match: AT4G17486.1 (AT4G17486.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 216.1 bits (549), Expect = 2.5e-56 Identity = 90/143 (62.94%), Postives = 116/143 (81.12%), Query Frame = 1
BLAST of Cucsa.240280 vs. TAIR10
Match: AT5G47310.1 (AT5G47310.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 214.2 bits (544), Expect = 9.4e-56 Identity = 91/143 (63.64%), Postives = 115/143 (80.42%), Query Frame = 1
BLAST of Cucsa.240280 vs. NCBI nr
Match: gi|449461140|ref|XP_004148301.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus]) HSP 1 Score: 531.2 bits (1367), Expect = 9.8e-148 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
BLAST of Cucsa.240280 vs. NCBI nr
Match: gi|659092419|ref|XP_008447052.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis melo]) HSP 1 Score: 516.9 bits (1330), Expect = 1.9e-143 Identity = 238/246 (96.75%), Postives = 245/246 (99.59%), Query Frame = 1
BLAST of Cucsa.240280 vs. NCBI nr
Match: gi|703097794|ref|XP_010096210.1| (hypothetical protein L484_026945 [Morus notabilis]) HSP 1 Score: 414.5 bits (1064), Expect = 1.3e-112 Identity = 185/247 (74.90%), Postives = 217/247 (87.85%), Query Frame = 1
BLAST of Cucsa.240280 vs. NCBI nr
Match: gi|567861114|ref|XP_006423211.1| (hypothetical protein CICLE_v10029154mg [Citrus clementina]) HSP 1 Score: 413.3 bits (1061), Expect = 3.0e-112 Identity = 185/246 (75.20%), Postives = 217/246 (88.21%), Query Frame = 1
BLAST of Cucsa.240280 vs. NCBI nr
Match: gi|297741423|emb|CBI32554.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 409.5 bits (1051), Expect = 4.3e-111 Identity = 183/247 (74.09%), Postives = 214/247 (86.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|