Carg26492 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTTCTTCCCAAAATGCAAAACCCATCTTTCTTCTAAAGCAAAGAATCTTGAAAAGCAAAGGCAAATTTCTTCTTCATTTATATTGCCTCTCTCCCACTTCCGGTCACCGGAAACCGGCTGCCCTCTGTTCCAAGGTTTGGTTTCTCTGATCTGTAAATAGATCTCATTTCTGGGATGTTTGTGATGTTTAGCTCTTGATTCAGCCATTGTTTTTCATGAATGTGTCTAAAAATTTGAGTCCTTATTGTACAGATTGAGACTACATGAAGTATATATCAGAGAAGGGATGGAATTGTATGATACCTCTCCATTTGAGGGGCGAATCGAGCTCTCACTTTTGCATCTTTTCGAAAAGGGCATCGAGATATGGTCCAGGGAACACTCCAGTTTATCTGAATGTGTATGACTTGACGACTGTGAATGGTTGTGTTTACTGGGCAGGGGTTGGCATATATCATTCTGGGATTCAAGGTTTGTTGGGTTGTTCTTGAATCGTGTGTTGTTTCGATGAATGATTGTTGTTGTTGTTGTTGTTGTTGTTCCTGATTGTGTGTGTGTTTTTTATGTGCTTTTACAGTTCATGGTGTGGAATATGCGTTTGGAGCTCATGAGTATCCGACGAGTGGTGTGTTTGAGGTTGAGCCTCGATGTTGTCCGGGGTTTAAGTTTAGGAAGTCAATTTTGATGGGTACCACTTGCTTGGATCCTGTTCAATTTCGAGAGTTCATGGAGCGTAATTCTGCCAATTACAATGGCGATATGTACCATTTGATTGTTAAGAACTGCAACCATTTTTGTGAGGATATTTGCTACAAGCTCACTGGGAAACACATACCCAAATGGGTGAATCGGCTTGCCAGAATAGGTAACTCAACATAGCTTTCACTTCTCTCCTCTTTCGCTTTTCCTAGGCTTCCCTTCAAGGTTTTAAAACGCGTCTACTACGAAAAAGTGATCTCCGTGTCTTCTAGTAAAAGGAGGTCTCCATGTCTACTAGGGAGAGGTTTACATACTTGTAAGGAATGTTTCGTTCTAGGGAGAGGTTTACATACTTATAAGGAATGTTTCGTTTTAGGGAGAGGTTATGCTTCGTTCTAGGAGGGAAAGGTTTGGTTTCCACACCCTTATAAGAAAATATAGAATCTCACAATCCACCCCCCTTGAGAGCACAAAGTCCTCGCTGACACACTATTCGGTGTCCACCCCTTGAGAGCACAAAGTCCTCGCTGACACACTACTCGGTGTCCGACTCTGATACCATTTGTAACCGTCCAAGGGTAGATATTGTCTTCTTTGAGCTTTTCCTTTTGGGCTTCTTTCAAGGTTTTAAAATGCCCCTAATAGGGAGAGGTTTCCATGCCCTTGACGTAAAGAATGCTTTGTTCCCCTCAAATGTACACAAACAATATGCAGAAAATTCATTTTTTTTTTAATTTTGAACTGATATGCTGCGTCTATAGCCTTTCATTCTTGAGAATCACTGTTTACGTTCTATGTTGCAGGATATCTATGTAACTGCATGCTCCCCAAGGCTCTCAAGACTTCAACTGTTCCACACGACTCAAATTTCCAAGGATATGACAACGAAAAGAAACGATTACGAACGACTTTTGGTTGTTTCACGTCGATTTCAATGCATCAACGGGAAGTTTCAATGTATTCATTGTTTCTTCACTCTCACTATAAAGGCTGTCTGCCACCATGGGAGCTCAAAGGGACGAGAAGTGGTTCGATGAAGGAACGCTGACAACAAACACTCCGCTTGCTTCTTTGCTGCCATTTTTTCGATCAAGGCGAGAGATTTCGCCTTGTTTTGGCAGAGAAGATTTGCAGCTGCAATATTTGGTTCCCTTAAGTTTTAGAGTATTCATTGTGAATGTGGTAGCACCACAGCAGTTCATAGTAATTCAAACAGACTGCACAATTATTTTTTCTTGTATATT TGCTTCTTCCCAAAATGCAAAACCCATCTTTCTTCTAAAGCAAAGAATCTTGAAAAGCAAAGGCAAATTTCTTCTTCATTTATATTGCCTCTCTCCCACTTCCGGTCACCGGAAACCGGCTGCCCTCTGTTCCAAGATTGAGACTACATGAAGTATATATCAGAGAAGGGATGGAATTGTATGATACCTCTCCATTTGAGGGGCGAATCGAGCTCTCACTTTTGCATCTTTTCGAAAAGGGCATCGAGATATGGTCCAGGGAACACTCCAGTTTATCTGAATGTGTATGACTTGACGACTGTGAATGGTTGTGTTTACTGGGCAGGGGTTGGCATATATCATTCTGGGATTCAAGTTCATGGTGTGGAATATGCGTTTGGAGCTCATGAGTATCCGACGAGTGGTGTGTTTGAGGTTGAGCCTCGATGTTGTCCGGGGTTTAAGTTTAGGAAGTCAATTTTGATGGGTACCACTTGCTTGGATCCTGTTCAATTTCGAGAGTTCATGGAGCGTAATTCTGCCAATTACAATGGCGATATGTACCATTTGATTGTTAAGAACTGCAACCATTTTTGTGAGGATATTTGCTACAAGCTCACTGGGAAACACATACCCAAATGGGTGAATCGGCTTGCCAGAATAGGATATCTATGTAACTGCATGCTCCCCAAGGCTCTCAAGACTTCAACTGTTCCACACGACTCAAATTTCCAAGGATATGACAACGAAAAGAAACGATTACGAACGACTTTTGGTTGTTTCACGTCGATTTCAATGCATCAACGGGAAGTTTCAATGTATTCATTGTTTCTTCACTCTCACTATAAAGGCTGTCTGCCACCATGGGAGCTCAAAGGGACGAGAAGTGGTTCGATGAAGGAACGCTGACAACAAACACTCCGCTTGCTTCTTTGCTGCCATTTTTTCGATCAAGGCGAGAGATTTCGCCTTGTTTTGGCAGAGAAGATTTGCAGCTGCAATATTTGGTTCCCTTAAGTTTTAGAGTATTCATTGTGAATGTGGTAGCACCACAGCAGTTCATAGTAATTCAAACAGACTGCACAATTATTTTTTCTTGTATATT ATGAAGTATATATCAGAGAAGGGATGGAATTGTATGATACCTCTCCATTTGAGGGGCGAATCGAGCTCTCACTTTTGCATCTTTTCGAAAAGGGCATCGAGATATGGTCCAGGGAACACTCCAGTTTATCTGAATGTGTATGACTTGACGACTGTGAATGGTTGTGTTTACTGGGCAGGGGTTGGCATATATCATTCTGGGATTCAAGTTCATGGTGTGGAATATGCGTTTGGAGCTCATGAGTATCCGACGAGTGGTGTGTTTGAGGTTGAGCCTCGATGTTGTCCGGGGTTTAAGTTTAGGAAGTCAATTTTGATGGGTACCACTTGCTTGGATCCTGTTCAATTTCGAGAGTTCATGGAGCGTAATTCTGCCAATTACAATGGCGATATGTACCATTTGATTGTTAAGAACTGCAACCATTTTTGTGAGGATATTTGCTACAAGCTCACTGGGAAACACATACCCAAATGGGTGAATCGGCTTGCCAGAATAGGATATCTATGTAACTGCATGCTCCCCAAGGCTCTCAAGACTTCAACTGTTCCACACGACTCAAATTTCCAAGGATATGACAACGAAAAGAAACGATTACGAACGACTTTTGGTTGTTTCACGTCGATTTCAATGCATCAACGGGAAGTTTCAATGTATTCATTGTTTCTTCACTCTCACTATAAAGGCTGTCTGCCACCATGGGAGCTCAAAGGGACGAGAAGTGGTTCGATGAAGGAACGCTGA MKYISEKGWNCMIPLHLRGESSSHFCIFSKRASRYGPGNTPVYLNVYDLTTVNGCVYWAGVGIYHSGIQVHGVEYAFGAHEYPTSGVFEVEPRCCPGFKFRKSILMGTTCLDPVQFREFMERNSANYNGDMYHLIVKNCNHFCEDICYKLTGKHIPKWVNRLARIGYLCNCMLPKALKTSTVPHDSNFQGYDNEKKRLRTTFGCFTSISMHQREVSMYSLFLHSHYKGCLPPWELKGTRSGSMKER
BLAST of Carg26492 vs. NCBI nr
Match: XP_022931622.1 (deSI-like protein At4g17486 [Cucurbita moschata] >XP_023530128.1 deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 537.3 bits (1383), Expect = 2.6e-149 Identity = 244/246 (99.19%), Postives = 244/246 (99.19%), Query Frame = 0
BLAST of Carg26492 vs. NCBI nr
Match: XP_022989456.1 (deSI-like protein At4g17486 [Cucurbita maxima]) HSP 1 Score: 531.6 bits (1368), Expect = 1.5e-147 Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0
BLAST of Carg26492 vs. NCBI nr
Match: XP_004148301.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus] >KGN44319.1 hypothetical protein Csa_7G253740 [Cucumis sativus]) HSP 1 Score: 490.0 bits (1260), Expect = 4.8e-135 Identity = 220/246 (89.43%), Postives = 236/246 (95.93%), Query Frame = 0
BLAST of Carg26492 vs. NCBI nr
Match: XP_016900355.1 (PREDICTED: deSI-like protein At4g17486 isoform X1 [Cucumis melo]) HSP 1 Score: 484.6 bits (1246), Expect = 2.0e-133 Identity = 217/247 (87.85%), Postives = 236/247 (95.55%), Query Frame = 0
BLAST of Carg26492 vs. NCBI nr
Match: XP_016900356.1 (PREDICTED: deSI-like protein At4g17486 isoform X2 [Cucumis melo] >XP_016900357.1 PREDICTED: deSI-like protein At4g17486 isoform X2 [Cucumis melo] >XP_016900358.1 PREDICTED: deSI-like protein At4g17486 isoform X2 [Cucumis melo]) HSP 1 Score: 484.6 bits (1246), Expect = 2.0e-133 Identity = 217/247 (87.85%), Postives = 236/247 (95.55%), Query Frame = 0
BLAST of Carg26492 vs. TAIR10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 346.7 bits (888), Expect = 1.2e-95 Identity = 156/251 (62.15%), Postives = 202/251 (80.48%), Query Frame = 0
BLAST of Carg26492 vs. TAIR10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 223.4 bits (568), Expect = 1.5e-58 Identity = 104/198 (52.53%), Postives = 131/198 (66.16%), Query Frame = 0
BLAST of Carg26492 vs. TAIR10
Match: AT4G17486.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 219.2 bits (557), Expect = 2.9e-57 Identity = 95/162 (58.64%), Postives = 121/162 (74.69%), Query Frame = 0
BLAST of Carg26492 vs. TAIR10
Match: AT5G47310.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 219.2 bits (557), Expect = 2.9e-57 Identity = 92/154 (59.74%), Postives = 119/154 (77.27%), Query Frame = 0
BLAST of Carg26492 vs. TAIR10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 218.0 bits (554), Expect = 6.4e-57 Identity = 91/151 (60.26%), Postives = 116/151 (76.82%), Query Frame = 0
BLAST of Carg26492 vs. Swiss-Prot
Match: sp|Q93VG8|PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 5.2e-56 Identity = 95/162 (58.64%), Postives = 121/162 (74.69%), Query Frame = 0
BLAST of Carg26492 vs. Swiss-Prot
Match: sp|Q5PQ09|DESI2_XENLA (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28 Identity = 67/164 (40.85%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of Carg26492 vs. Swiss-Prot
Match: sp|Q6DC39|DESI2_DANRE (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 7.9e-28 Identity = 64/164 (39.02%), Postives = 91/164 (55.49%), Query Frame = 0
BLAST of Carg26492 vs. Swiss-Prot
Match: sp|A3QRX8|DESI2_PIG (Deubiquitinase DESI2 OS=Sus scrofa OX=9823 GN=DESI2 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26 Identity = 64/164 (39.02%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of Carg26492 vs. Swiss-Prot
Match: sp|Q9BSY9|DESI2_HUMAN (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.5e-26 Identity = 61/155 (39.35%), Postives = 91/155 (58.71%), Query Frame = 0
BLAST of Carg26492 vs. TrEMBL
Match: tr|A0A0A0K5V2|A0A0A0K5V2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G253740 PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 3.2e-135 Identity = 220/246 (89.43%), Postives = 236/246 (95.93%), Query Frame = 0
BLAST of Carg26492 vs. TrEMBL
Match: tr|A0A1S4DWL5|A0A1S4DWL5_CUCME (deSI-like protein At4g17486 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489609 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 1.3e-133 Identity = 217/247 (87.85%), Postives = 236/247 (95.55%), Query Frame = 0
BLAST of Carg26492 vs. TrEMBL
Match: tr|A0A1S4DXA8|A0A1S4DXA8_CUCME (deSI-like protein At4g17486 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489609 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 1.3e-133 Identity = 217/247 (87.85%), Postives = 236/247 (95.55%), Query Frame = 0
BLAST of Carg26492 vs. TrEMBL
Match: tr|A0A2N9ECL3|A0A2N9ECL3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS367 PE=4 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 1.3e-112 Identity = 184/247 (74.49%), Postives = 217/247 (87.85%), Query Frame = 0
BLAST of Carg26492 vs. TrEMBL
Match: tr|A0A2N9GGM2|A0A2N9GGM2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26323 PE=4 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 1.3e-112 Identity = 184/247 (74.49%), Postives = 217/247 (87.85%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |