Cucsa.240170 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.240170
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Cellular retinaldehyde-binding/triple function, C-terminal
Location	scaffold02047 : 104531 .. 105141 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGTTCTCAAAACCTGCAATGAGGAGTTTTCTGATCTCGATATTTTGCAGTTTGTTCGACTTGAGGGGTCCGACAAGACTGGAAACCGTGTTGTTGGAAAGTACTTCCCTTCTGTGGTTGTAAGTGGAGATTGAAGAGATATATCTTCTGTAAGTTCCAGAACGAATTGTCTGAGGGTTCATTTTGCATTGTGTGCTTTCATACTACTGACCAGAAGGATGATAATTGTTCAGGCCTTACCATCTTGAGGTGGATTTATGAAGAACTTCCATCTGATTACAAGGATAGACTTCAAGTTCTCTACTTTGTACATCCCGGTCTCCGTTGGAGGCTTGTTTTGGTGACTTTTGGCCATTTTTTCCTAAGTGGCAGATTGTTCTGGAAAATCAAGTATGTGAGCCGCCTTCAGTATCTTTCAGAAGATATATAAAAGGGAGAGGTTGAGATTCCTGACTACGTAAAAAGTCACAATGAAGTTCTTGAACACAGATCACTAACTGATTATGGCATTGAACCCGATTCCCTCAATGTCATGGAGGTACCTTATTGTGCAAACTCCTTTGGGAGATACGAGGAGAGATGGATGTCAAGGCAGTACATGGCATAG

mRNA sequence

ATGATTGTTCTCAAAACCTGCAATGAGGAGTTTTCTGATCTCGATATTTTGCAGTTTGTTCGACTTGAGGGGTCCGACAAGACTGGAAACCGTGTTGTTGGAAAATTGAAGAGATATATCTTCTGTAAGTTCCAGAACGAATTGTCTGAGGGTTCATTTTGCATTGTGTGCTTTCATACTACTGACCAGAAGGATGATAATTGTTCAGGCCTTACCATCTTGAGGTGGATTTATGAAGAACTTCCATCTGATTACAAGGATAGACTTCAAGTTCTCTACTTTGTACATCCCGGTCTCCGTTGGAGGCTTGTTTTGGTGACTTTTGGCCATTTTTTCCTAAGTGGCAGATTGTTCTGGAAAATCAAGTATGGAGAGGTTGAGATTCCTGACTACGTAAAAAGTCACAATGAAGTTCTTGAACACAGATCACTAACTGATTATGGCATTGAACCCGATTCCCTCAATGTCATGGAGGTACCTTATTGTGCAAACTCCTTTGGGAGATACGAGGAGAGATGGATGTCAAGGCAGTACATGGCATAG

Coding sequence (CDS)

ATGATTGTTCTCAAAACCTGCAATGAGGAGTTTTCTGATCTCGATATTTTGCAGTTTGTTCGACTTGAGGGGTCCGACAAGACTGGAAACCGTGTTGTTGGAAAATTGAAGAGATATATCTTCTGTAAGTTCCAGAACGAATTGTCTGAGGGTTCATTTTGCATTGTGTGCTTTCATACTACTGACCAGAAGGATGATAATTGTTCAGGCCTTACCATCTTGAGGTGGATTTATGAAGAACTTCCATCTGATTACAAGGATAGACTTCAAGTTCTCTACTTTGTACATCCCGGTCTCCGTTGGAGGCTTGTTTTGGTGACTTTTGGCCATTTTTTCCTAAGTGGCAGATTGTTCTGGAAAATCAAGTATGGAGAGGTTGAGATTCCTGACTACGTAAAAAGTCACAATGAAGTTCTTGAACACAGATCACTAACTGATTATGGCATTGAACCCGATTCCCTCAATGTCATGGAGGTACCTTATTGTGCAAACTCCTTTGGGAGATACGAGGAGAGATGGATGTCAAGGCAGTACATGGCATAG

Protein sequence

MIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGKLKRYIFCKFQNELSEGSFCIVCFHTTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWKIKYGEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVPYCANSFGRYEERWMSRQYMA*

Homology

[Close]

BLAST of Cucsa.240170 vs. TrEMBL
Match: A0A0A0LEY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822210 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 7.4e-75
Identity = 149/199 (74.87%), Postives = 158/199 (79.40%), Query Frame = 1


Query: 8   NEEFSDLDILQFVRLEGSDKTGNR---VVGK-----------LKRYIFCKFQNELSEGSF 67
           +E+FSDLD+LQFVRLEG+DKTGNR   VVGK           LKRYIF KFQNELSEG F
Sbjct: 48  DEDFSDLDLLQFVRLEGTDKTGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPF 107

Query: 68  CIVCFHTTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 127
           CIV FHTT QKDDNCSGLTILRWIYEELPSDYKDRLQ LYFVHPGLR RLVL TFG FFL
Sbjct: 108 CIVYFHTTAQKDDNCSGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFL 167

Query: 128 SGRLFWKIKY-------------GEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVP 180
           SG L+WKIKY             GEVEIPD+VKSH++VLEHR LTDYGIEPDSLNV EVP
Sbjct: 168 SGGLYWKIKYLSRLQYLSEDIKKGEVEIPDFVKSHDDVLEHRPLTDYGIEPDSLNVTEVP 227

[Close]

BLAST of Cucsa.240170 vs. TrEMBL
Match: A0A0A0K5T9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G252660 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.5e-70
Identity = 139/180 (77.22%), Postives = 142/180 (78.89%), Query Frame = 1


Query: 1   MIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGKLKRYIFCKFQNELSEGSFCIVCFHT 60
           MIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGK                      +  
Sbjct: 6   MIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGK----------------------YFP 65

Query: 61  TDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWK 120
           +  KDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWK
Sbjct: 66  SVVKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWK 125

Query: 121 IKYGEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVPYCANSFGRYEERWMSRQYMA 180
           I            +HNEVLEHRSLTDYGIEPDSLNVMEVPYCANSFGRYEERWMSRQYMA
Sbjct: 126 I------------NHNEVLEHRSLTDYGIEPDSLNVMEVPYCANSFGRYEERWMSRQYMA 151

[Close]

BLAST of Cucsa.240170 vs. TrEMBL
Match: D7TIK6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05700 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.4e-60
Identity = 121/200 (60.50%), Postives = 148/200 (74.00%), Query Frame = 1


Query: 8   NEEFSDLDILQFVRLEGSDKTGNRV---VGK-----------LKRYIFCKFQNELSEGSF 67
           +E+FSDLD+LQF+R++GSDK+GNR+   VGK           LK+Y+F K  +EL EG F
Sbjct: 48  DEDFSDLDLLQFIRIQGSDKSGNRILRIVGKYLPAPVVSGERLKKYVFHKIVSELPEGPF 107

Query: 68  CIVCFHTTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 127
           CIV  H+T QK+DN  GLTILRWIYEELPSD+KDRLQ +YFVHPGLR RL+  T G FFL
Sbjct: 108 CIVYMHSTVQKEDNSPGLTILRWIYEELPSDFKDRLQTVYFVHPGLRSRLLFATLGRFFL 167

Query: 128 SGRLFWKIKY-------------GEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVP 181
           SG L+WKIKY             GEVEIP++V+SH++VLEHR LTDYGIEPD L++ E+P
Sbjct: 168 SGGLYWKIKYVSRLQYLWEDVKKGEVEIPEFVQSHDDVLEHRPLTDYGIEPDPLHLTEMP 227

[Close]

BLAST of Cucsa.240170 vs. TrEMBL
Match: B9SZT0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1108000 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 7.4e-59
Identity = 117/198 (59.09%), Postives = 145/198 (73.23%), Query Frame = 1


Query: 8   NEEFSDLDILQFVRLEGSDKTGNR---VVGK-----------LKRYIFCKFQNELSEGSF 67
           +E+FSDLD+LQF RL+GSDK+GNR   V+GK           LK+YIF K  +EL EG F
Sbjct: 62  DEDFSDLDLLQFFRLQGSDKSGNRIFRVIGKYFPAQVISAERLKKYIFHKMCSELPEGPF 121

Query: 68  CIVCFHTTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 127
           CIV  H+T QK+DN  G+TILRWIYEELP+DYK+RLQV+YF+HPGLR RLV  T G FFL
Sbjct: 122 CIVYMHSTVQKEDNSPGITILRWIYEELPADYKNRLQVVYFIHPGLRSRLVFATLGRFFL 181

Query: 128 SGRLFWKIKY-------------GEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVP 179
           SG L+WKIKY             GEVEIP++V+SH+++LEHR LTDYGIEPD  ++ E+P
Sbjct: 182 SGGLYWKIKYVSRLQYLWEDIKKGEVEIPEFVQSHDDILEHRPLTDYGIEPDPFHLNEIP 241

[Close]

BLAST of Cucsa.240170 vs. TrEMBL
Match: M5W350_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010499mg PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.8e-58
Identity = 117/198 (59.09%), Postives = 144/198 (72.73%), Query Frame = 1


Query: 8   NEEFSDLDILQFVRLEGSDKTGNRV---VGK-----------LKRYIFCKFQNELSEGSF 67
           +E+FSDL++LQF R++G DK+GNR+   VGK           LKRYIF K  +EL EG +
Sbjct: 48  DEDFSDLELLQFFRVQGHDKSGNRIFRIVGKYFPAPVVSGDRLKRYIFHKLCSELPEGPY 107

Query: 68  CIVCFHTTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 127
           CIV  H+T QK+DN  G+TILRWIYE+LPS  KDRLQ++YF+HPGLR RLV  T G FFL
Sbjct: 108 CIVYMHSTVQKEDNSPGITILRWIYEDLPSYLKDRLQIVYFIHPGLRSRLVFATLGRFFL 167

Query: 128 SGRLFWKIKY-------------GEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVP 179
           +G L+WKIKY             GEVEIP++VK H++VLEHR LTDYGIEPD L+++EVP
Sbjct: 168 TGGLYWKIKYVSRLQYLWENIKKGEVEIPEFVKGHDDVLEHRPLTDYGIEPDPLHMIEVP 227

[Close]

BLAST of Cucsa.240170 vs. TAIR10
Match: AT3G10210.1 (AT3G10210.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 209.1 bits (531), Expect = 2.2e-54
Identity = 107/195 (54.87%), Postives = 131/195 (67.18%), Query Frame = 1


Query: 8   NEEFSDLDILQFVRLEGSDKTGNRV---VGK-----------LKRYIFCKFQNELSEGSF 67
           +E+FSDLD+LQF  L+G D++GNR+   VGK           LK+YI  K  N+  EG  
Sbjct: 43  DEDFSDLDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPL 102

Query: 68  CIVCFHTTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 127
           C+V  H+T QKDDN  G+TILRWIYE+LPSD KDRLQ++YF+HPGLR RLV+ T G   L
Sbjct: 103 CLVYMHSTVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLL 162

Query: 128 SGRLFWKIKY-------------GEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVP 176
           SG L+WKIKY             GEVEIPD+VK+H+ VLEHR LTDYGIEPD   + EV 
Sbjct: 163 SGGLYWKIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPDPFQLSEVQ 222

[Close]

BLAST of Cucsa.240170 vs. TAIR10
Match: AT4G35750.1 (AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22
Identity = 61/189 (32.28%), Postives = 97/189 (51.32%), Query Frame = 1


Query: 14  LDILQFVRLEGSDKTGN---RVVGK-----------LKRYIFCKFQNELSEGSFCIVCFH 73
           ++ L+  ++ G DK G    R++GK           LK+Y+  K    L    F ++  H
Sbjct: 14  IEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFAVLYVH 73

Query: 74  TTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFW 133
           T  Q+ +N  G++ LR IY+ +P + +D LQ +YF+HPGL+ RL L T G F  SG L+ 
Sbjct: 74  TGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRFLFSGGLYG 133

Query: 134 KIKY-------------GEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVPYCANSF 176
           K++Y              E+E+P++V  H++ LE+R + DYG E D   V       +S 
Sbjct: 134 KLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHARVFAGAAVDSSV 193

[Close]

BLAST of Cucsa.240170 vs. NCBI nr
Match: gi|778685269|ref|XP_004136651.2| (PREDICTED: uncharacterized protein LOC101222693 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-74
Identity = 149/199 (74.87%), Postives = 158/199 (79.40%), Query Frame = 1


Query: 8   NEEFSDLDILQFVRLEGSDKTGNR---VVGK-----------LKRYIFCKFQNELSEGSF 67
           +E+FSDLD+LQFVRLEG+DKTGNR   VVGK           LKRYIF KFQNELSEG F
Sbjct: 48  DEDFSDLDLLQFVRLEGTDKTGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPF 107

Query: 68  CIVCFHTTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 127
           CIV FHTT QKDDNCSGLTILRWIYEELPSDYKDRLQ LYFVHPGLR RLVL TFG FFL
Sbjct: 108 CIVYFHTTAQKDDNCSGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFL 167

Query: 128 SGRLFWKIKY-------------GEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVP 180
           SG L+WKIKY             GEVEIPD+VKSH++VLEHR LTDYGIEPDSLNV EVP
Sbjct: 168 SGGLYWKIKYLSRLQYLSEDIKKGEVEIPDFVKSHDDVLEHRPLTDYGIEPDSLNVTEVP 227

[Close]

BLAST of Cucsa.240170 vs. NCBI nr
Match: gi|659085182|ref|XP_008443288.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-74
Identity = 150/199 (75.38%), Postives = 156/199 (78.39%), Query Frame = 1


Query: 8   NEEFSDLDILQFVRLEGSDKTGNR---VVGK-----------LKRYIFCKFQNELSEGSF 67
           +E+FSDLD+LQFVRLEGSDK GNR   VVGK           LKRYIF KFQNELSEG F
Sbjct: 48  DEDFSDLDLLQFVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPF 107

Query: 68  CIVCFHTTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 127
           CIV FHTT QKDDNC GLTILRWIYEELPSDYKDRLQ LYFVHPGLR RLVL TFG FFL
Sbjct: 108 CIVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFL 167

Query: 128 SGRLFWKIKY-------------GEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVP 180
           SG L+WKIKY             GEVEIPD+VKSH+EVLEHR LTDYGIEPDSLNV EVP
Sbjct: 168 SGGLYWKIKYVSRLQYLSEDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVTEVP 227

[Close]

BLAST of Cucsa.240170 vs. NCBI nr
Match: gi|700189076|gb|KGN44309.1| (hypothetical protein Csa_7G252660 [Cucumis sativus])

HSP 1 Score: 271.9 bits (694), Expect = 7.8e-70
Identity = 139/180 (77.22%), Postives = 142/180 (78.89%), Query Frame = 1


Query: 1   MIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGKLKRYIFCKFQNELSEGSFCIVCFHT 60
           MIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGK                      +  
Sbjct: 6   MIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGK----------------------YFP 65

Query: 61  TDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWK 120
           +  KDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWK
Sbjct: 66  SVVKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWK 125

Query: 121 IKYGEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVPYCANSFGRYEERWMSRQYMA 180
           I            +HNEVLEHRSLTDYGIEPDSLNVMEVPYCANSFGRYEERWMSRQYMA
Sbjct: 126 I------------NHNEVLEHRSLTDYGIEPDSLNVMEVPYCANSFGRYEERWMSRQYMA 151

[Close]

BLAST of Cucsa.240170 vs. NCBI nr
Match: gi|225441313|ref|XP_002275793.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Vitis vinifera])

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-60
Identity = 121/200 (60.50%), Postives = 148/200 (74.00%), Query Frame = 1


Query: 8   NEEFSDLDILQFVRLEGSDKTGNRV---VGK-----------LKRYIFCKFQNELSEGSF 67
           +E+FSDLD+LQF+R++GSDK+GNR+   VGK           LK+Y+F K  +EL EG F
Sbjct: 48  DEDFSDLDLLQFIRIQGSDKSGNRILRIVGKYLPAPVVSGERLKKYVFHKIVSELPEGPF 107

Query: 68  CIVCFHTTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 127
           CIV  H+T QK+DN  GLTILRWIYEELPSD+KDRLQ +YFVHPGLR RL+  T G FFL
Sbjct: 108 CIVYMHSTVQKEDNSPGLTILRWIYEELPSDFKDRLQTVYFVHPGLRSRLLFATLGRFFL 167

Query: 128 SGRLFWKIKY-------------GEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVP 181
           SG L+WKIKY             GEVEIP++V+SH++VLEHR LTDYGIEPD L++ E+P
Sbjct: 168 SGGLYWKIKYVSRLQYLWEDVKKGEVEIPEFVQSHDDVLEHRPLTDYGIEPDPLHLTEMP 227

[Close]

BLAST of Cucsa.240170 vs. NCBI nr
Match: gi|255581381|ref|XP_002531499.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Ricinus communis])

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-58
Identity = 117/198 (59.09%), Postives = 145/198 (73.23%), Query Frame = 1


Query: 8   NEEFSDLDILQFVRLEGSDKTGNR---VVGK-----------LKRYIFCKFQNELSEGSF 67
           +E+FSDLD+LQF RL+GSDK+GNR   V+GK           LK+YIF K  +EL EG F
Sbjct: 62  DEDFSDLDLLQFFRLQGSDKSGNRIFRVIGKYFPAQVISAERLKKYIFHKMCSELPEGPF 121

Query: 68  CIVCFHTTDQKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 127
           CIV  H+T QK+DN  G+TILRWIYEELP+DYK+RLQV+YF+HPGLR RLV  T G FFL
Sbjct: 122 CIVYMHSTVQKEDNSPGITILRWIYEELPADYKNRLQVVYFIHPGLRSRLVFATLGRFFL 181

Query: 128 SGRLFWKIKY-------------GEVEIPDYVKSHNEVLEHRSLTDYGIEPDSLNVMEVP 179
           SG L+WKIKY             GEVEIP++V+SH+++LEHR LTDYGIEPD  ++ E+P
Sbjct: 182 SGGLYWKIKYVSRLQYLWEDIKKGEVEIPEFVQSHDDILEHRPLTDYGIEPDPFHLNEIP 241

The following BLAST results are available for this feature:

BLAST of Cucsa.240170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEY6_CUCSA	7.4e-75	74.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822210 PE=4 SV=1	[more]
A0A0A0K5T9_CUCSA	5.5e-70	77.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G252660 PE=4 SV=1	[more]
D7TIK6_VITVI	1.4e-60	60.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05700 PE=4 SV=...	[more]
B9SZT0_RICCO	7.4e-59	59.09	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1108000 PE=4 SV=1	[more]
M5W350_PRUPE	4.8e-58	59.09	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010499mg PE=4 SV=1	[more]

BLAST of Cucsa.240170 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10210.1	2.2e-54	54.87	SEC14 cytosolic factor family protein / phosphoglyceride transfer fa...	[more]
AT4G35750.1	1.0e-22	32.28	SEC14 cytosolic factor family protein / phosphoglyceride transfer fa...	[more]

BLAST of Cucsa.240170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778685269\|ref\|XP_004136651.2\|	1.1e-74	74.87	PREDICTED: uncharacterized protein LOC101222693 [Cucumis sativus]	[more]
gi\|659085182\|ref\|XP_008443288.1\|	1.1e-74	75.38	PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis mel...	[more]
gi\|700189076\|gb\|KGN44309.1\|	7.8e-70	77.22	hypothetical protein Csa_7G252660 [Cucumis sativus]	[more]
gi\|225441313\|ref\|XP_002275793.1\|	1.9e-60	60.50	PREDICTED: ganglioside-induced differentiation-associated protein 2 [Vitis vinif...	[more]
gi\|255581381\|ref\|XP_002531499.1\|	1.1e-58	59.09	PREDICTED: ganglioside-induced differentiation-associated protein 2 [Ricinus com...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001251	CRAL-TRIO_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.240170.1	Cucsa.240170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001251	CRAL-TRIO lipid binding domain	PFAM	PF13716	CRAL_TRIO_2	coord: 33..137 score: 4.4
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 8..179 score: 8.5
None	No IPR available	PANTHER	PTHR11106:SF64	SUBFAMILY NOT NAMED	coord: 8..179 score: 8.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.240170	Csa7G252660	Cucumber (Chinese Long) v2	cgycuB348
Cucsa.240170	CsaV3_7G023170	Cucumber (Chinese Long) v3	cgycucB367

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.240170	Bottle gourd (USVL1VR-Ls)	cgylsiB397
Cucsa.240170	Melon (DHL92) v3.6.1	cgymedB406
Cucsa.240170	Watermelon (97103) v2	cgywmbB430
Cucsa.240170	Wild cucumber (PI 183967)	cgycpiB364
Cucsa.240170	Melon (DHL92) v3.5.1	cgymeB408
Cucsa.240170	Watermelon (Charleston Gray)	cgywcgB423
Cucsa.240170	Watermelon (97103) v1	cgywmB453