CsaV3_7G023170 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G023170
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionganglioside-induced differentiation-associated protein 2
Locationchr7 : 12143282 .. 12144259 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGAGAGTCCCCCTGTATTTTCTTTTTATATTTTTTTATGAGAAACATTCAATCAGAAGAAAATCAAAGCAGAGATGGGTAGCACCCCAAACTGTTTCTCAATCGTCATCCTCCCTTTTGATGGCGGCATCTATTCCCGCCCACTTTTGCCTGACAAAGATAAAGAGTCCGAAAATGCTGATAATTGACATGATTGTTCTCAAAACCTGCAATGAGGAGTTTTCTGATCTCGATATTTTGCAGTTTGTTCGACTTGAGGGGTCCGACAAGACTGGAAACCGTGTTGTTGGAAAGTACTTCCCTTCTGTGGTTGTAAGTGGAGATTGAAGAGATATATCTTCTGTAAGTTCCAGAACGAATTGTCTGAGGGTTCATTTTGCATTGTGTGCTTTCATACTACTGACCAGAAGGATGATAATTGTTCAGGCCTTACCATCTTGAGGTGGATTTATGAAGAACTTCCATCTGATTACAAGGATAGACTTCAAGTTCTCTACTTTGTACATCCCGGTCTCCGTTGGAGGCTTGTTTTGGTGACTTTTGGCCATTTTTTCCTAAGTGGCAGATTGTTCTGGAAAATCAAGTATGTGAGCCGCCTTCAGTATCTTTCAGAAGATATATAAAAGGGAGAGGTTGAGATTCCTGACTACGTAAAAAGTCACAATGAAGTTCTTGAACACAGATCACTAACTGATTATGGCATTGAACCCGATTCCCTCAATGTCATGGAGGTACCTTATTGTGCAAACTCCTTTGGGAGATACGAGGAGAGATGGATGTCAAGGCAGTACATGGCATAGTGAGCTTGGTTAAAGAAGTTGTATTTGATCTTAGGCAACTCCAAGGCCTATGATCAATTAAGCCATGGCTAAACAATAAAATATCTGTAGTCTGATTGTGCTTTGTTGTGTAGCTTGATTAGCAACTTCTTTAACGTTGCTTGTAAACTAAAGGGGATGCTGTTGTGTACTGCATAG

mRNA sequence

ATAGAGAGTCCCCCTAAACATTCAATCAGAAGAAAATCAAAGCAGAGATGGGTAGCACCCCAAACTGTTTCTCAATCGTCATCCTCCCTTTTGATGGCGGCATCTATTCCCGCCCACTTTTGCCTGACAAAGATAAAGAGTCCGAAAATGCTGATAATTGACATGATTGTTCTCAAAACCTGCAATGAGGAGTTTTCTGATCTCGATATTTTGCAGTTTGTTCGACTTGAGGGGTCCGACAAGACTGGAAACCGTGTTGTTGGAAAGTACTTCCCTTCTGTGGTTAAGGATGATAATTGTTCAGGCCTTACCATCTTGAGGTGGATTTATGAAGAACTTCCATCTGATTACAAGGATAGACTTCAAGTTCTCTACTTTGTACATCCCGGTCTCCGTTGGAGGCTTGTTTTGGTGACTTTTGGCCATTTTTTCCTAAGTGGCAGATTGTTCTGGAAAATCAAATCACTAACTGATTATGGCATTGAACCCGATTCCCTCAATGTCATGGAGGTACCTTATTGTGCAAACTCCTTTGGGAGATACGAGGAGAGATGGATGTCAAGGCAGTACATGGCATACTTGATTAGCAACTTCTTTAACGTTGCTTGTAAACTAAAGGGGATGCTGTTGTGTACTGCATAG

Coding sequence (CDS)

ATAGAGAGTCCCCCTAAACATTCAATCAGAAGAAAATCAAAGCAGAGATGGGTAGCACCCCAAACTGTTTCTCAATCGTCATCCTCCCTTTTGATGGCGGCATCTATTCCCGCCCACTTTTGCCTGACAAAGATAAAGAGTCCGAAAATGCTGATAATTGACATGATTGTTCTCAAAACCTGCAATGAGGAGTTTTCTGATCTCGATATTTTGCAGTTTGTTCGACTTGAGGGGTCCGACAAGACTGGAAACCGTGTTGTTGGAAAGTACTTCCCTTCTGTGGTTAAGGATGATAATTGTTCAGGCCTTACCATCTTGAGGTGGATTTATGAAGAACTTCCATCTGATTACAAGGATAGACTTCAAGTTCTCTACTTTGTACATCCCGGTCTCCGTTGGAGGCTTGTTTTGGTGACTTTTGGCCATTTTTTCCTAAGTGGCAGATTGTTCTGGAAAATCAAATCACTAACTGATTATGGCATTGAACCCGATTCCCTCAATGTCATGGAGGTACCTTATTGTGCAAACTCCTTTGGGAGATACGAGGAGAGATGGATGTCAAGGCAGTACATGGCATACTTGATTAGCAACTTCTTTAACGTTGCTTGTAAACTAAAGGGGATGCTGTTGTGTACTGCATAG

Protein sequence

IESPPKHSIRRKSKQRWVAPQTVSQSSSSLLMAASIPAHFCLTKIKSPKMLIIDMIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGKYFPSVVKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWKIKSLTDYGIEPDSLNVMEVPYCANSFGRYEERWMSRQYMAYLISNFFNVACKLKGMLLCTA
Homology
[Close]
BLAST of CsaV3_7G023170 vs. NCBI nr
Match: KGN44309.1 (hypothetical protein Csa_7G252660 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 7.6e-76
Identity = 142/151 (94.04%), Postives = 143/151 (94.70%), Query Frame = 0 

Query: 50  MLIIDMIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGKYFPSVVKDDNCSGLTILRWI 109
           MLIIDMIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGKYFPSVVKDDNCSGLTILRWI
Sbjct: 1   MLIIDMIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGKYFPSVVKDDNCSGLTILRWI 60

Query: 110 YEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWKI--------KSLTDYGI 169
           YEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWKI        +SLTDYGI
Sbjct: 61  YEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWKINHNEVLEHRSLTDYGI 120

Query: 170 EPDSLNVMEVPYCANSFGRYEERWMSRQYMA 193
           EPDSLNVMEVPYCANSFGRYEERWMSRQYMA
Sbjct: 121 EPDSLNVMEVPYCANSFGRYEERWMSRQYMA 151

[Close]
BLAST of CsaV3_7G023170 vs. NCBI nr
Match: XP_004136651.2 (PREDICTED: uncharacterized protein LOC101222693 [Cucumis sativus] >KGN59469.1 hypothetical protein Csa_3G822210 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 1.8e-48
Identity = 113/199 (56.78%), Postives = 120/199 (60.30%), Query Frame = 0 

Query: 62  NEEFSDLDILQFVRLEGSDKTGN---RVVGKYFPSVV----------------------- 121
           +E+FSDLD+LQFVRLEG+DKTGN   RVVGKYFP+VV                       
Sbjct: 48  DEDFSDLDLLQFVRLEGTDKTGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPF 107

Query: 122 ----------KDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 181
                     KDDNCSGLTILRWIYEELPSDYKDRLQ LYFVHPGLR RLVL TFG FFL
Sbjct: 108 CIVYFHTTAQKDDNCSGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFL 167

Query: 182 SGRLFWKIK---------------------------------SLTDYGIEPDSLNVMEVP 192
           SG L+WKIK                                  LTDYGIEPDSLNV EVP
Sbjct: 168 SGGLYWKIKYLSRLQYLSEDIKKGEVEIPDFVKSHDDVLEHRPLTDYGIEPDSLNVTEVP 227

[Close]
BLAST of CsaV3_7G023170 vs. NCBI nr
Match: XP_008443288.1 (PREDICTED: rho GTPase-activating protein 68F [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 3.9e-48
Identity = 113/199 (56.78%), Postives = 118/199 (59.30%), Query Frame = 0 

Query: 62  NEEFSDLDILQFVRLEGSDKTGN---RVVGKYFPSVV----------------------- 121
           +E+FSDLD+LQFVRLEGSDK GN   RVVGKYFP+VV                       
Sbjct: 48  DEDFSDLDLLQFVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPF 107

Query: 122 ----------KDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 181
                     KDDNC GLTILRWIYEELPSDYKDRLQ LYFVHPGLR RLVL TFG FFL
Sbjct: 108 CIVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFL 167

Query: 182 SGRLFWKIK---------------------------------SLTDYGIEPDSLNVMEVP 192
           SG L+WKIK                                  LTDYGIEPDSLNV EVP
Sbjct: 168 SGGLYWKIKYVSRLQYLSEDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVTEVP 227

[Close]
BLAST of CsaV3_7G023170 vs. NCBI nr
Match: XP_022158545.1 (ganglioside-induced differentiation-associated protein 2 [Momordica charantia])

HSP 1 Score: 197.2 bits (500), Expect = 5.6e-47
Identity = 110/199 (55.28%), Postives = 119/199 (59.80%), Query Frame = 0 

Query: 62  NEEFSDLDILQFVRLEGSDKTGN---RVVGKYFPSVV----------------------- 121
           +E+FSDLD+LQFVRLEGSDK+GN   RV+GKYFP+VV                       
Sbjct: 49  DEDFSDLDLLQFVRLEGSDKSGNRIFRVIGKYFPAVVVSGERLKKYILHKFHNELAEGPF 108

Query: 122 ----------KDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 181
                     KDDNC GLTILRWIYEELPSDYKDRL+VLYFVHPGLR RLVL T G FFL
Sbjct: 109 CVVYFHTSTQKDDNCPGLTILRWIYEELPSDYKDRLKVLYFVHPGLRSRLVLATLGRFFL 168

Query: 182 SGRLFWKIK---------------------------------SLTDYGIEPDSLNVMEVP 192
           SG L+WK+K                                  LTDYGIEPDSLNV EVP
Sbjct: 169 SGGLYWKVKYVSRLQYLSEEIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVGEVP 228

[Close]
BLAST of CsaV3_7G023170 vs. NCBI nr
Match: XP_022935085.1 (ganglioside-induced differentiation-associated protein 2 [Cucurbita moschata] >XP_023527462.1 ganglioside-induced differentiation-associated protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.7 bits (496), Expect = 1.6e-46
Identity = 110/207 (53.14%), Postives = 119/207 (57.49%), Query Frame = 0 

Query: 54  DMIVLKTCNEEFSDLDILQFVRLEGSDKTGN---RVVGKYFPSVV--------------- 113
           D +   + +E+FSDLD+LQFVRLEGSDK GN   RVVGKY+P+VV               
Sbjct: 42  DCVQNLSSDEDFSDLDLLQFVRLEGSDKAGNRILRVVGKYYPAVVVSGERLKKYILHKFQ 101

Query: 114 ------------------KDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVL 173
                             KDDNC GLTILRWIYEELPSDYKDRLQ LYFVHPGLR RLVL
Sbjct: 102 NELSEGPFCVVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQTLYFVHPGLRSRLVL 161

Query: 174 VTFGHFFLSGRLFWKIK---------------------------------SLTDYGIEPD 192
            T G FFLSG L+WKIK                                  LTDYGIEPD
Sbjct: 162 ATLGRFFLSGSLYWKIKYVSRLQYLSDDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPD 221

[Close]
BLAST of CsaV3_7G023170 vs. TAIR10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-34
Identity = 82/195 (42.05%), Postives = 100/195 (51.28%), Query Frame = 0 

Query: 62  NEEFSDLDILQFVRLEGSDKTGN---RVVGKYFP-------------------------- 121
           +E+FSDLD+LQF  L+G D++GN   R+VGKYFP                          
Sbjct: 43  DEDFSDLDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPL 102

Query: 122 -------SVVKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 181
                  +V KDDN  G+TILRWIYE+LPSD KDRLQ++YF+HPGLR RLV+ T G   L
Sbjct: 103 CLVYMHSTVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLL 162

Query: 182 SGRLFWKIK---------------------------------SLTDYGIEPDSLNVMEVP 188
           SG L+WKIK                                  LTDYGIEPD   + EV 
Sbjct: 163 SGGLYWKIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPDPFQLSEVQ 222

[Close]
BLAST of CsaV3_7G023170 vs. TAIR10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 71.2 bits (173), Expect = 8.5e-13
Identity = 44/143 (30.77%), Postives = 69/143 (48.25%), Query Frame = 0 

Query: 68  LDILQFVRLEGSDKTGN---RVVGKYFPS------------------------------- 127
           ++ L+  ++ G DK G    R++GK+FP+                               
Sbjct: 14  IEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFAVLYVH 73

Query: 128 --VVKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFW 173
             V + +N  G++ LR IY+ +P + +D LQ +YF+HPGL+ RL L T G F  SG L+ 
Sbjct: 74  TGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRFLFSGGLYG 133

[Close]
BLAST of CsaV3_7G023170 vs. TrEMBL
Match: tr|A0A0A0K5T9|A0A0A0K5T9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G252660 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 5.0e-76
Identity = 142/151 (94.04%), Postives = 143/151 (94.70%), Query Frame = 0 

Query: 50  MLIIDMIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGKYFPSVVKDDNCSGLTILRWI 109
           MLIIDMIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGKYFPSVVKDDNCSGLTILRWI
Sbjct: 1   MLIIDMIVLKTCNEEFSDLDILQFVRLEGSDKTGNRVVGKYFPSVVKDDNCSGLTILRWI 60

Query: 110 YEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWKI--------KSLTDYGI 169
           YEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWKI        +SLTDYGI
Sbjct: 61  YEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFLSGRLFWKINHNEVLEHRSLTDYGI 120

Query: 170 EPDSLNVMEVPYCANSFGRYEERWMSRQYMA 193
           EPDSLNVMEVPYCANSFGRYEERWMSRQYMA
Sbjct: 121 EPDSLNVMEVPYCANSFGRYEERWMSRQYMA 151

[Close]
BLAST of CsaV3_7G023170 vs. TrEMBL
Match: tr|A0A0A0LEY6|A0A0A0LEY6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822210 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 113/199 (56.78%), Postives = 120/199 (60.30%), Query Frame = 0 

Query: 62  NEEFSDLDILQFVRLEGSDKTGN---RVVGKYFPSVV----------------------- 121
           +E+FSDLD+LQFVRLEG+DKTGN   RVVGKYFP+VV                       
Sbjct: 48  DEDFSDLDLLQFVRLEGTDKTGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPF 107

Query: 122 ----------KDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 181
                     KDDNCSGLTILRWIYEELPSDYKDRLQ LYFVHPGLR RLVL TFG FFL
Sbjct: 108 CIVYFHTTAQKDDNCSGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFL 167

Query: 182 SGRLFWKIK---------------------------------SLTDYGIEPDSLNVMEVP 192
           SG L+WKIK                                  LTDYGIEPDSLNV EVP
Sbjct: 168 SGGLYWKIKYLSRLQYLSEDIKKGEVEIPDFVKSHDDVLEHRPLTDYGIEPDSLNVTEVP 227

[Close]
BLAST of CsaV3_7G023170 vs. TrEMBL
Match: tr|A0A1S3B7Q3|A0A1S3B7Q3_CUCME (rho GTPase-activating protein 68F OS=Cucumis melo OX=3656 GN=LOC103486907 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.6e-48
Identity = 113/199 (56.78%), Postives = 118/199 (59.30%), Query Frame = 0 

Query: 62  NEEFSDLDILQFVRLEGSDKTGN---RVVGKYFPSVV----------------------- 121
           +E+FSDLD+LQFVRLEGSDK GN   RVVGKYFP+VV                       
Sbjct: 48  DEDFSDLDLLQFVRLEGSDKAGNRILRVVGKYFPAVVVSGERLKRYIFHKFQNELSEGPF 107

Query: 122 ----------KDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 181
                     KDDNC GLTILRWIYEELPSDYKDRLQ LYFVHPGLR RLVL TFG FFL
Sbjct: 108 CIVYFHTTAQKDDNCPGLTILRWIYEELPSDYKDRLQFLYFVHPGLRSRLVLATFGRFFL 167

Query: 182 SGRLFWKIK---------------------------------SLTDYGIEPDSLNVMEVP 192
           SG L+WKIK                                  LTDYGIEPDSLNV EVP
Sbjct: 168 SGGLYWKIKYVSRLQYLSEDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVTEVP 227

[Close]
BLAST of CsaV3_7G023170 vs. TrEMBL
Match: tr|A0A2I4ECR7|A0A2I4ECR7_9ROSI (ganglioside-induced differentiation-associated protein 2 OS=Juglans regia OX=51240 GN=LOC108988396 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.9e-39
Identity = 97/200 (48.50%), Postives = 111/200 (55.50%), Query Frame = 0 

Query: 62  NEEFSDLDILQFVRLEGSDKTGN---RVVGKYFP-------------------------- 121
           +E+FSDLD+LQF RL+GSDK G+   R+VGKYFP                          
Sbjct: 47  DEDFSDLDLLQFFRLQGSDKHGSRIYRIVGKYFPAPVVSGERLKKYIFHKICSELSEGPF 106

Query: 122 -------SVVKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 181
                  +V K+DN  G+TILRWIYEELPSD KDRLQ LYFVHPGLR RLV  T G  FL
Sbjct: 107 CIVYLHSAVQKEDNSPGITILRWIYEELPSDIKDRLQALYFVHPGLRSRLVFATLGRLFL 166

Query: 182 SGRLFWKIK---------------------------------SLTDYGIEPDSLNVMEVP 193
           SG L+WKIK                                  LTDYGIEPDSL++ EVP
Sbjct: 167 SGDLYWKIKYVSRLQYLWDDIKKGEVEIPDFVKEHDDVLEHRPLTDYGIEPDSLHLSEVP 226

[Close]
BLAST of CsaV3_7G023170 vs. TrEMBL
Match: tr|D7TIK6|D7TIK6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g05700 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.4e-38
Identity = 93/200 (46.50%), Postives = 112/200 (56.00%), Query Frame = 0 

Query: 62  NEEFSDLDILQFVRLEGSDKTGN---RVVGKYFP-------------------------- 121
           +E+FSDLD+LQF+R++GSDK+GN   R+VGKY P                          
Sbjct: 48  DEDFSDLDLLQFIRIQGSDKSGNRILRIVGKYLPAPVVSGERLKKYVFHKIVSELPEGPF 107

Query: 122 -------SVVKDDNCSGLTILRWIYEELPSDYKDRLQVLYFVHPGLRWRLVLVTFGHFFL 181
                  +V K+DN  GLTILRWIYEELPSD+KDRLQ +YFVHPGLR RL+  T G FFL
Sbjct: 108 CIVYMHSTVQKEDNSPGLTILRWIYEELPSDFKDRLQTVYFVHPGLRSRLLFATLGRFFL 167

Query: 182 SGRLFWKIK---------------------------------SLTDYGIEPDSLNVMEVP 193
           SG L+WKIK                                  LTDYGIEPD L++ E+P
Sbjct: 168 SGGLYWKIKYVSRLQYLWEDVKKGEVEIPEFVQSHDDVLEHRPLTDYGIEPDPLHLTEMP 227

The following BLAST results are available for this feature:
BLAST of CsaV3_7G023170 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44309.17.6e-7694.04hypothetical protein Csa_7G252660 [Cucumis sativus][more]
XP_004136651.21.8e-4856.78PREDICTED: uncharacterized protein LOC101222693 [Cucumis sativus] >KGN59469.1 hy... [more]
XP_008443288.13.9e-4856.78PREDICTED: rho GTPase-activating protein 68F [Cucumis melo][more]
XP_022158545.15.6e-4755.28ganglioside-induced differentiation-associated protein 2 [Momordica charantia][more]
XP_022935085.11.6e-4653.14ganglioside-induced differentiation-associated protein 2 [Cucurbita moschata] >X... [more]
BLAST of CsaV3_7G023170 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10210.11.0e-3442.05SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein[more]
AT4G35750.18.5e-1330.77SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein[more]
BLAST of CsaV3_7G023170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G023170 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K5T9|A0A0A0K5T9_CUCSA5.0e-7694.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G252660 PE=4 SV=1[more]
tr|A0A0A0LEY6|A0A0A0LEY6_CUCSA1.2e-4856.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822210 PE=4 SV=1[more]
tr|A0A1S3B7Q3|A0A1S3B7Q3_CUCME2.6e-4856.78rho GTPase-activating protein 68F OS=Cucumis melo OX=3656 GN=LOC103486907 PE=4 S... [more]
tr|A0A2I4ECR7|A0A2I4ECR7_9ROSI2.9e-3948.50ganglioside-induced differentiation-associated protein 2 OS=Juglans regia OX=512... [more]
tr|D7TIK6|D7TIK6_VITVI2.4e-3846.50Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g05700 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036865CRAL-TRIO_dom_sf
IPR001251CRAL-TRIO_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G023170.1CsaV3_7G023170.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 74..152
e-value: 6.0E-8
score: 32.8
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3DG3DSA:3.40.525.10coord: 90..160
e-value: 9.6E-7
score: 30.6
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 94..154
coord: 155..191
coord: 60..93
NoneNo IPR availablePANTHERPTHR11106:SF64SUBFAMILY NOT NAMEDcoord: 94..154
coord: 60..93
NoneNo IPR availablePANTHERPTHR11106:SF64SUBFAMILY NOT NAMEDcoord: 155..191

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G023170Cucsa.240170Cucumber (Gy14) v1cgycucB367
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G023170Cucumber (Chinese Long) v3cuccucB215
CsaV3_7G023170Silver-seed gourdcarcucB0572
CsaV3_7G023170Cucumber (Gy14) v2cgybcucB347
CsaV3_7G023170Cucurbita maxima (Rimu)cmacucB0640
CsaV3_7G023170Cucurbita moschata (Rifu)cmocucB0624
CsaV3_7G023170Cucurbita pepo (Zucchini)cpecucB0324
CsaV3_7G023170Wild cucumber (PI 183967)cpicucB414
CsaV3_7G023170Bottle gourd (USVL1VR-Ls)cuclsiB533
CsaV3_7G023170Melon (DHL92) v3.5.1cucmeB551
CsaV3_7G023170Melon (DHL92) v3.6.1cucmedB539
CsaV3_7G023170Watermelon (Charleston Gray)cucwcgB536
CsaV3_7G023170Watermelon (97103) v1cucwmB578
CsaV3_7G023170Watermelon (97103) v2cucwmbB544
CsaV3_7G023170Watermelon (97103) v2cucwmbB582
CsaV3_7G023170Wax gourdcucwgoB696