Cucsa.232200 (gene) Cucumber (Gy14) v1

NameCucsa.232200
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold01989 : 273188 .. 273991 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGCTGTATAGTAGGGCTCTTCTCACAATCGCCCCCTTTTTTTAGAGCCATAGTAGAATTTTGCAGCAGTGGATTGGCTACAAAGATTTGACGTTTTTGTTTTCTTCTTCTACTACTACTTTTCTCCAACTTTtCCCCcTTCTTCCCCTTTCTTCCAAACTCCGCCGATGGATTTCGCTTCGATTTTCTATTGAACAAACCTTCCGATTCTGTGGGTTTTCATTTGGGTCCCTTAATTTCTCTTCCGTTTCCTCGTTTGTTTGATGGGTAAGAAAAAAaCCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATCATCGGCCAACCCATACAGCCTAGAAAAAGGGGCCGACCTCGTAAGGTTCTCGAGGAACAACAAAACGAGCAGGAGAGCAAGAAGCCGCCGCCGCCGTTGCTGGAAGTTGCAGAAAATCCACCGGAGAAGAAAATTAAAGGCACTGTGGATGAAGCGGCGCTGGGTTCCATGATAGAAGGTTCGAAAGAAGAAGAACCCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAATGGGTAAACAAAAATCAAAAAACAATTTGATGGGTTTTTtCTTTTTTtCTTTTTGGAATTTGGGAATCTGAAAAACCTGAAGAAAAaTCTCTGGGTTTCGTTtCTTTGaTTTTTGTGGGTAAATTGTATTGTTGTTGTATTTGATTGGATTAGGTTAAAAGAAATGAAATTTGGATTGGAAACTTCACTTTC

mRNA sequence

TGTGCTGTATAGTAGGGCTCTTCTCACAATCGCCCCCTTTTTTTAGAGCCATAGTAGAATTTTGCAGCAGTGGATTGGCTACAAAGATTTGACGTTTTTGTTTTCTTCTTCTACTACTACTTTTCTCCAACTTTTCCCCCTTCTTCCCCTTTCTTCCAAACTCCGCCGATGGATTTCGCTTCGATTTTCTATTGAACAAACCTTCCGATTCTGTGGGTTTTCATTTGGGTCCCTTAATTTCTCTTCCGTTTCCTCGTTTGTTTGATGGGTAAGAAAAAAACCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATCATCGGCCAACCCATACAGCCTAGAAAAAGGGGCCGACCTCGTAAGGTTCTCGAGGAACAACAAAACGAGCAGGAGAGCAAGAAGCCGCCGCCGCCGTTGCTGGAAGTTGCAGAAAATCCACCGGAGAAGAAAATTAAAGGCACTGTGGATGAAGCGGCGCTGGGTTCCATGATAGAAGGTTCGAAAGAAGAAGAACCCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAATGGGTAAACAAAAATCAAAAAACAATTTGATGGGTTTTTTCTTTTTTTCTTTTTGGAATTTGGGAATCTGAAAAACCTGAAGAAAAATCTCTGGGTTTCGTTTCTTTGATTTTTGTGGGTAAATTGTATTGTTGTTGTATTTGATTGGATTAGGTTAAAAGAAATGAAATTTGGATTGGAAACTTCACTTTC

Coding sequence (CDS)

ATGGGTAAGAAAAAAaCCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATCATCGGCCAACCCATACAGCCTAGAAAAAGGGGCCGACCTCGTAAGGTTCTCGAGGAACAACAAAACGAGCAGGAGAGCAAGAAGCCGCCGCCGCCGTTGCTGGAAGTTGCAGAAAATCCACCGGAGAAGAAAATTAAAGGCACTGTGGATGAAGCGGCGCTGGGTTCCATGATAGAAGGTTCGAAAGAAGAAGAACCCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAA

Protein sequence

MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS*
BLAST of Cucsa.232200 vs. TrEMBL
Match: A0A0A0LRH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361610 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.4e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1

Query: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP 60
           MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP 60

Query: 61  PLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS 116
           PLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS
Sbjct: 61  PLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS 115

BLAST of Cucsa.232200 vs. TrEMBL
Match: A0A059BQT5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01898 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.1e-13
Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 1

Query: 1   MGKKKTQKTKEIAVAIAETSTSKL-ADDGIIGQPIQPRKRGRPRKVL----------EEQ 60
           MGK+K QKTKE++VAIAE S+S   A D      + PRKRGRPRK++          E+Q
Sbjct: 2   MGKRKAQKTKELSVAIAEASSSAAEAGDETKSPAVTPRKRGRPRKIVEAKAEAKQEEEQQ 61

Query: 61  QNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKE---EEPKTGDGSRSRGR 116
           Q +Q+ ++   P+ +      E K+     +A  G + E  +E   E       SRSR R
Sbjct: 62  QQQQQQQQQQNPIQQAEAVEEEAKVVDQTKKARTGEVEEQKQEMLQESSTKKTSSRSRAR 121

BLAST of Cucsa.232200 vs. TrEMBL
Match: A0A067DBG6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033032mg PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.4e-12
Identity = 56/129 (43.41%), Postives = 74/129 (57.36%), Query Frame = 1

Query: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQP-IQ-PRKRGRPRKVLEEQQNEQESKKP 60
           MGKKK QKT+E++VAIAE S+S   D     QP +Q PRKRGRPRK++E ++N  +    
Sbjct: 1   MGKKKPQKTEELSVAIAEASSSGEGDKTPQQQPQVQTPRKRGRPRKIVESEENRDQEAAA 60

Query: 61  PPPLLEV-AENPPEKKIKGTVD-------EAALGSMIEGSKEEEPKTGDGS----RSRGR 116
                EV  E    KK++ + +       EA+  SM    K  +   G+ S    RSRGR
Sbjct: 61  QVRQKEVTGEQSQPKKLQTSKEEQEVIKAEASSASMESAQKRGQSIAGEPSKEPPRSRGR 120

BLAST of Cucsa.232200 vs. TrEMBL
Match: A0A151TC30_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_019184 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-11
Identity = 56/125 (44.80%), Postives = 67/125 (53.60%), Query Frame = 1

Query: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP 60
           MGKKK QKTKE+ VAIAE S+     D    QP  PRKRGRPRKV+  +   +  K  P 
Sbjct: 1   MGKKKRQKTKELWVAIAEASSK--GGDTEQPQPQPPRKRGRPRKVVVVETESEAKKVEPQ 60

Query: 61  PLLEVAENPPEKKIKGTVDEAALG----SMIEGSKE------EEPKTGDGSRSRGRRKNK 116
           P   + E  PE     T  E   G     +   SKE      + PK G+ SRSR RRK+K
Sbjct: 61  P---IEEPQPEASTTATKKEEEHGKHQEELTSESKEGVFQEIQLPK-GEPSRSRARRKSK 119

BLAST of Cucsa.232200 vs. TrEMBL
Match: A0A0B2PYA3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_008676 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.3e-11
Identity = 53/127 (41.73%), Postives = 73/127 (57.48%), Query Frame = 1

Query: 1   MGKKKTQKTKEIAVAIAETSTS-----KLADDGIIGQPIQPRKRGRPRKVLEEQQNEQES 60
           MGKKK QKTKE++VAIAE S++     +     +  QP  PRKRGRPRK++ +++  +E 
Sbjct: 2   MGKKKPQKTKELSVAIAEASSAIDEKEQQIQVQVQPQPQAPRKRGRPRKIVLKREESEEE 61

Query: 61  KKPPPPLLEVAENPPEKKIKGTVDE----AALGSMIEGSKEEE---PKTGDGSRSRGRRK 116
           K         A+       KGT +E    ++   M   +K+EE   PK  + SRSR RRK
Sbjct: 62  KTQLMIGQRGAQGTESSMEKGTTNEQEGTSSSACMRVTTKQEEMQLPKV-EPSRSRARRK 121

BLAST of Cucsa.232200 vs. NCBI nr
Match: gi|700207477|gb|KGN62596.1| (hypothetical protein Csa_2G361610 [Cucumis sativus])

HSP 1 Score: 228.8 bits (582), Expect = 4.9e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1

Query: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP 60
           MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP 60

Query: 61  PLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS 116
           PLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS
Sbjct: 61  PLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS 115

BLAST of Cucsa.232200 vs. NCBI nr
Match: gi|702369304|ref|XP_010061321.1| (PREDICTED: ataxin-8-like [Eucalyptus grandis])

HSP 1 Score: 82.0 bits (201), Expect = 7.4e-13
Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 1

Query: 1   MGKKKTQKTKEIAVAIAETSTSKL-ADDGIIGQPIQPRKRGRPRKVL----------EEQ 60
           MGK+K QKTKE++VAIAE S+S   A D      + PRKRGRPRK++          E+Q
Sbjct: 2   MGKRKAQKTKELSVAIAEASSSAAEAGDETKSPAVTPRKRGRPRKIVEAKAEAKQEEEQQ 61

Query: 61  QNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKE---EEPKTGDGSRSRGR 116
           Q +Q+ ++   P+ +      E K+     +A  G + E  +E   E       SRSR R
Sbjct: 62  QQQQQQQQQQNPIQQAEAVEEEAKVVDQTKKARTGEVEEQKQEMLQESSTKKTSSRSRAR 121

BLAST of Cucsa.232200 vs. NCBI nr
Match: gi|645228026|ref|XP_008220798.1| (PREDICTED: zinc finger and BTB domain-containing protein 47 [Prunus mume])

HSP 1 Score: 82.0 bits (201), Expect = 7.4e-13
Identity = 58/137 (42.34%), Postives = 73/137 (53.28%), Query Frame = 1

Query: 1   MGKKKTQKTKEIAVAIAET-STSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKP- 60
           MGKKK QKTKE++VAIAE  ST          QP  PRKRGRPRK++E+ ++ +E   P 
Sbjct: 1   MGKKKPQKTKELSVAIAEAPSTGDEGQQQSQPQPHTPRKRGRPRKIIEKTESTEEQSTPQ 60

Query: 61  --PPPLLEVAENPPE--KKIKGTVD----------------EAALGSMIEGSKEEEPKTG 116
                    AE+  E  KK K T D                E +  S+  G+K+EE +  
Sbjct: 61  TEEAAAAAAAEDVEEQSKKAKATEDEDQQEEEQEQPKIKEEEPSSASVRGGAKKEEGQAR 120

BLAST of Cucsa.232200 vs. NCBI nr
Match: gi|985441478|ref|XP_015384243.1| (PREDICTED: translation initiation factor IF-2 [Citrus sinensis])

HSP 1 Score: 79.0 bits (193), Expect = 6.2e-12
Identity = 56/129 (43.41%), Postives = 74/129 (57.36%), Query Frame = 1

Query: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQP-IQ-PRKRGRPRKVLEEQQNEQESKKP 60
           MGKKK QKT+E++VAIAE S+S   D     QP +Q PRKRGRPRK++E ++N  +    
Sbjct: 1   MGKKKPQKTEELSVAIAEASSSGEGDKTPQQQPQVQTPRKRGRPRKIVESEENRDQEAAA 60

Query: 61  PPPLLEV-AENPPEKKIKGTVD-------EAALGSMIEGSKEEEPKTGDGS----RSRGR 116
                EV  E    KK++ + +       EA+  SM    K  +   G+ S    RSRGR
Sbjct: 61  QVRQKEVTGEQSQPKKLQTSKEEQEVIKAEASSASMESAQKRGQSIAGEPSKEPPRSRGR 120

BLAST of Cucsa.232200 vs. NCBI nr
Match: gi|764546318|ref|XP_011459553.1| (PREDICTED: parathymosin-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-11
Identity = 57/131 (43.51%), Postives = 70/131 (53.44%), Query Frame = 1

Query: 1   MGKKKTQKTKEIAVAIAE-TSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQN---EQESK 60
           MGKKK QKTKE++VAIAE +ST   A      QP  PRKRGRPRK++EEQ +   EQE+ 
Sbjct: 1   MGKKKPQKTKELSVAIAEASSTGDEAQQQPQPQPQTPRKRGRPRKIIEEQSSTKIEQEAA 60

Query: 61  KPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGS---KEEEPKTG---------DGSRSR 116
                 +E A    + K     +E       E     KEE P +          + SRSR
Sbjct: 61  AAAAQQVEGASQSKKAKASEKEEEDKQEQEEEEQQKVKEEGPSSAKPKESEERREPSRSR 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LRH2_CUCSA3.4e-57100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361610 PE=4 SV=1[more]
A0A059BQT5_EUCGR5.1e-1340.31Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01898 PE=4 SV=1[more]
A0A067DBG6_CITSI4.4e-1243.41Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033032mg PE=4 SV=1[more]
A0A151TC30_CAJCA2.2e-1144.80Uncharacterized protein OS=Cajanus cajan GN=KK1_019184 PE=4 SV=1[more]
A0A0B2PYA3_GLYSO6.3e-1141.73Uncharacterized protein OS=Glycine soja GN=glysoja_008676 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700207477|gb|KGN62596.1|4.9e-57100.00hypothetical protein Csa_2G361610 [Cucumis sativus][more]
gi|702369304|ref|XP_010061321.1|7.4e-1340.31PREDICTED: ataxin-8-like [Eucalyptus grandis][more]
gi|645228026|ref|XP_008220798.1|7.4e-1342.34PREDICTED: zinc finger and BTB domain-containing protein 47 [Prunus mume][more]
gi|985441478|ref|XP_015384243.1|6.2e-1243.41PREDICTED: translation initiation factor IF-2 [Citrus sinensis][more]
gi|764546318|ref|XP_011459553.1|2.4e-1143.51PREDICTED: parathymosin-like [Fragaria vesca subsp. vesca][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.232200.1Cucsa.232200.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37615FAMILY NOT NAMEDcoord: 1..115
score: 7.4

The following gene(s) are paralogous to this gene:

None