Cucsa.232200 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGCTGTATAGTAGGGCTCTTCTCACAATCGCCCCCTTTTTTTAGAGCCATAGTAGAATTTTGCAGCAGTGGATTGGCTACAAAGATTTGACGTTTTTGTTTTCTTCTTCTACTACTACTTTTCTCCAACTTTtCCCCcTTCTTCCCCTTTCTTCCAAACTCCGCCGATGGATTTCGCTTCGATTTTCTATTGAACAAACCTTCCGATTCTGTGGGTTTTCATTTGGGTCCCTTAATTTCTCTTCCGTTTCCTCGTTTGTTTGATGGGTAAGAAAAAAaCCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATCATCGGCCAACCCATACAGCCTAGAAAAAGGGGCCGACCTCGTAAGGTTCTCGAGGAACAACAAAACGAGCAGGAGAGCAAGAAGCCGCCGCCGCCGTTGCTGGAAGTTGCAGAAAATCCACCGGAGAAGAAAATTAAAGGCACTGTGGATGAAGCGGCGCTGGGTTCCATGATAGAAGGTTCGAAAGAAGAAGAACCCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAATGGGTAAACAAAAATCAAAAAACAATTTGATGGGTTTTTtCTTTTTTtCTTTTTGGAATTTGGGAATCTGAAAAACCTGAAGAAAAaTCTCTGGGTTTCGTTtCTTTGaTTTTTGTGGGTAAATTGTATTGTTGTTGTATTTGATTGGATTAGGTTAAAAGAAATGAAATTTGGATTGGAAACTTCACTTTC TGTGCTGTATAGTAGGGCTCTTCTCACAATCGCCCCCTTTTTTTAGAGCCATAGTAGAATTTTGCAGCAGTGGATTGGCTACAAAGATTTGACGTTTTTGTTTTCTTCTTCTACTACTACTTTTCTCCAACTTTTCCCCCTTCTTCCCCTTTCTTCCAAACTCCGCCGATGGATTTCGCTTCGATTTTCTATTGAACAAACCTTCCGATTCTGTGGGTTTTCATTTGGGTCCCTTAATTTCTCTTCCGTTTCCTCGTTTGTTTGATGGGTAAGAAAAAAACCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATCATCGGCCAACCCATACAGCCTAGAAAAAGGGGCCGACCTCGTAAGGTTCTCGAGGAACAACAAAACGAGCAGGAGAGCAAGAAGCCGCCGCCGCCGTTGCTGGAAGTTGCAGAAAATCCACCGGAGAAGAAAATTAAAGGCACTGTGGATGAAGCGGCGCTGGGTTCCATGATAGAAGGTTCGAAAGAAGAAGAACCCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAATGGGTAAACAAAAATCAAAAAACAATTTGATGGGTTTTTTCTTTTTTTCTTTTTGGAATTTGGGAATCTGAAAAACCTGAAGAAAAATCTCTGGGTTTCGTTTCTTTGATTTTTGTGGGTAAATTGTATTGTTGTTGTATTTGATTGGATTAGGTTAAAAGAAATGAAATTTGGATTGGAAACTTCACTTTC ATGGGTAAGAAAAAAaCCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATCATCGGCCAACCCATACAGCCTAGAAAAAGGGGCCGACCTCGTAAGGTTCTCGAGGAACAACAAAACGAGCAGGAGAGCAAGAAGCCGCCGCCGCCGTTGCTGGAAGTTGCAGAAAATCCACCGGAGAAGAAAATTAAAGGCACTGTGGATGAAGCGGCGCTGGGTTCCATGATAGAAGGTTCGAAAGAAGAAGAACCCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAA MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS*
BLAST of Cucsa.232200 vs. TrEMBL
Match: A0A0A0LRH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361610 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 3.4e-57 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1
BLAST of Cucsa.232200 vs. TrEMBL
Match: A0A059BQT5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01898 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.1e-13 Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 1
BLAST of Cucsa.232200 vs. TrEMBL
Match: A0A067DBG6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033032mg PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.4e-12 Identity = 56/129 (43.41%), Postives = 74/129 (57.36%), Query Frame = 1
BLAST of Cucsa.232200 vs. TrEMBL
Match: A0A151TC30_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_019184 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.2e-11 Identity = 56/125 (44.80%), Postives = 67/125 (53.60%), Query Frame = 1
BLAST of Cucsa.232200 vs. TrEMBL
Match: A0A0B2PYA3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_008676 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 6.3e-11 Identity = 53/127 (41.73%), Postives = 73/127 (57.48%), Query Frame = 1
BLAST of Cucsa.232200 vs. NCBI nr
Match: gi|700207477|gb|KGN62596.1| (hypothetical protein Csa_2G361610 [Cucumis sativus]) HSP 1 Score: 228.8 bits (582), Expect = 4.9e-57 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1
BLAST of Cucsa.232200 vs. NCBI nr
Match: gi|702369304|ref|XP_010061321.1| (PREDICTED: ataxin-8-like [Eucalyptus grandis]) HSP 1 Score: 82.0 bits (201), Expect = 7.4e-13 Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 1
BLAST of Cucsa.232200 vs. NCBI nr
Match: gi|645228026|ref|XP_008220798.1| (PREDICTED: zinc finger and BTB domain-containing protein 47 [Prunus mume]) HSP 1 Score: 82.0 bits (201), Expect = 7.4e-13 Identity = 58/137 (42.34%), Postives = 73/137 (53.28%), Query Frame = 1
BLAST of Cucsa.232200 vs. NCBI nr
Match: gi|985441478|ref|XP_015384243.1| (PREDICTED: translation initiation factor IF-2 [Citrus sinensis]) HSP 1 Score: 79.0 bits (193), Expect = 6.2e-12 Identity = 56/129 (43.41%), Postives = 74/129 (57.36%), Query Frame = 1
BLAST of Cucsa.232200 vs. NCBI nr
Match: gi|764546318|ref|XP_011459553.1| (PREDICTED: parathymosin-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 77.0 bits (188), Expect = 2.4e-11 Identity = 57/131 (43.51%), Postives = 70/131 (53.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |