Cucsa.232090 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGGGGAGGGAGTGATAAATGATAATAGGAAAAAAAAAAAAAAGAAAAGAAAAAGAAAGAAAAGAAATTGGGGGAATATTAATTTTGGTTGAAACGAGGCAAAGCGAAAGCACGGATTCATCGTAGAAATTAGAAAACAAAAATCAAAGCGATTGAAGAAACGAGGCTAACGGATTCCACTTCATTCATCTTCTTCCCATTTTCGCTCTCAATTTTTTTTTTTTCCATCTTACTGTTCTTCAACTTCCTTCAAGGTTAGGTTTCGATTTCTTTTCTTTTCTTTTTTTACCCTACTTCTTCAGTTTCTGCTGTTCATTTCCTAACTGTTCCCTTACTTCCATTGATTTATGCTTCGGATTACTCACATTCCCTTTCTGCTTTTGTTTGAAGAAGCTGTGGATTAGATCCACAATCCATTTGACTGATGCTTTTGTTTTTGCTCCTTTAGATCGTGTTTTCTTAACCTAATGCCATTTCTTTTCCCAGGGGATAAGTCTTTATGGAAGGAGTTGGGGGCGACACGGCATCTGCAGTAGCACCTCTGGCCAAGTGGAGAAACGATTTTTCTAGAGCATTTCAATATTACTTGGATCGATCCACTCCTCACCCGGTCCAGAGGTGGTTGGGGACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTATGTTCAAGGGTTTTATGTTGTTTCCTATGGATTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTTTCGCCCAAGGTTGATCCTGAGCTCGATGTCTTGGATGGAGCTTCCTTGCCTACCAAAGGTTCTGATGAGTTTAAGCCTTTCATACGCCGGCTTCCGGAGTTCAAGTTTTGGTATTCCTCTTTCCATTAGCTACTTCCTTAATTTTTTTATTTTGGGATCTGATTGCATTTTAATTTTGCAATTGGTTTTTGGTTAATTATCTAGTAACTTTGGTTCTGGCTGCTTTAGTTGAATAGATTTCGTTGCTGAAAACTATCATACGTTGCAGCATTTGGTATTCATTTCTCGCTCTTTATTTTGAAATGTTGTATAAGGAGTGCAGATAGATATATCAAATAATGTTCCGAAGACCTCACCATTGATACAACTCGAGTATTACTATTGATATACATAGATAATTTGCATTGCGAAAAGATTATATTTGTTTTACATACTCGTATAAATTGCAGGCTTTATGTTGAAAATATATATTGTATCTATATCCAATTTTTCCTTTTCCTGGGCGGAATGTGCATTAATGGATAAAAGTTTTGTTTGGTTACTTATACAGCGTAACGTGTACTTCTGTAAGTTGCTCCTTGCCAAGTGTAAACATATTTCTAAAATTTGTCATTGCATGGAGATGGGGTGACTTTGATAATTATGGTGGTGGACATGTTTTTTCTCGTCAGTTGTCATCCTTATTTCAGACACATGGCATTCTTGAGGATGTACATTCATTGAATTGTGAGGGATTACTATAAGTTATAAATGTATTAGATTTCATGAGTTGTGTGGCATTATATACTGGCTGGTTTTGATGATTCTGGTGGTCTCTTATTCTTTTCAAGTGTCAAATTATGGCGAATGCTTTGTCATTGCACGGGGTTGGAATGAAATGTGCAGTATCAGATTATACTGATATCATTTAGTTGAGTTGATATAGACTTCATGGACCCTTAAAGCCTATCTTTTCTATTTTTCAGGTACGCCATCACCAAAGCTTTTTGTATTGCGTTCCTCATGACCTTCTTCTCGCTATTCGATGTTCCGGTTTTCTGGCCCATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAAATCATGCACATGATCAAATACAAATACATTCCTTTCAGCATAGGAAAACAGGTGAGGCAACAAGAACACTTGGTTAGTGGTAATGGAGTAGGGCGAAAGTACAGATAAAACACCTTCCAGATGGAGAAAAATACTGTTACACGGGGAAAAAACCACATATACAGAGAGAGAGAGAGAGTAGCCATAAAATCCCAACCCAGGGAAAAACTGAGACACCTTTCGCATATAGATAGAACTTTTCCCGTTCTCTAATATTCGTTTAAAACCCATCCTGCTTCCTGGGACATAATTCATGAGTAGCCATGTACTACCATCCCTGAGCGAAACCAATTTTATTTGACTAATAGTTCAGTGAATCCATTAGATCTTTGGAAGATAAGTTACAAAAGGCATTTAGAAACTATATACAATGGTCGTTAGGAAGGAGGATTGAGAGTGAAAGATATCCTTCTCATTCCCAAGACAAAACACTGAGGTGGCGTTTGGCTGCCCCACCGACTTCATAAACTGAATTTAAATAGCTCAAACTAACCCTGCTAATTTCAATCGTATTCACTTTGGTTACGAACTTTCTCAAGCAGCTTCATCATCACGACTCAACATCCAAAAATACTTTCTAACTTCAATATATTACCTTTAGACTTTATAACTCAACTTAGCCCTTCAAACACCTGTGAAATATACATTTTCCTTTCCATCCCATGGCAAGAGATAGGGAGAGGGGTAGTGGTAATTCTGAAAGGTGGGTTAAAATAGTGTAACAATTTAACTTTTGCCTTTTTTTTTTTGTTGTGGCAGAGATATACGGGAAAGAGGTCTTCTGCAAGTAGCAGTGGCGTTTCAAGAGACTAAAGGTTTCATCATTCCCATCTGGTTAGTAGTAGTAGACAGAAGAAGCGTGCAGCATTCCCAACTCTTCTTTCAGTTTTTCCTAAACAAGCACTTGGTCTTCTTTGTCAGACAAGTACGAATTCAGGACACTGGTTGAAGAGAAGAAACAGCTTTTATGGTTGGTGGTAATATGGATATTGTAATAGCTTTTTTTCTCAATTCTGTGTTGACCACAATACACATCCTATATGGACTTTTCTCTTCTTGTGTTTGTTTTGTCTTTAGGATTCTTTAGGCTCTATTACTATAGAATATCGCTTATAATTTTTCCTTTTCTTGTATCCTTATTTTTTTTTCTGCTGGGGAAGCAAAAAAATTAAATGTCCAATTAATATTTGTTGGGTTCT GTGGGGAGGGAGTGATAAATGATAATAGgaaaaaaaaaaaaaagaaaagaaaaagaaagaaaagaaaTTGGGGGAATATTAATTTTGGTTGAAACGAGGCAAAGCGAAAGCACGGATTCATCGTAGAAATTAGAAAACAAAAATCAAAGCGATTGAAGAAACGAGGCTAACGGATTCCACTTCATTCATCTTCTTCCCATTTTCGCTCTCAATTTTTTTTTTTTCCATCTTACTGTTCTTCAACTTCCTTCAAGGGGATAAGTCTTTATGGAAGGAGTTGGGGGCGACACGGCATCTGCAGTAGCACCTCTGGCCAAGTGGAGAAACGATTTTTCTAGAGCATTTCAATATTACTTGGATCGATCCACTCCTCACCCGGTCCAGAGGTGGTTGGGGACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTATGTTCAAGGGTTTTATGTTGTTTCCTATGGATTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTTTCGCCCAAGGTTGATCCTGAGCTCGATGTCTTGGATGGAGCTTCCTTGCCTACCAAAGGTTCTGATGAGTTTAAGCCTTTCATACGCCGGCTTCCGGAGTTCAAGTTTTGGTACGCCATCACCAAAGCTTTTTGTATTGCGTTCCTCATGACCTTCTTCTCGCTATTCGATGTTCCGGTTTTCTGGCCCATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAAATCATGCACATGATCAAATACAAATACATTCCTTTCAGCATAGGAAAACAGAGATATACGGGAAAGAGGTCTTCTGCAAGTAGCAGTGGCGTTTCAAGAGACTAAAGGTTTCATCATTCCCATCTGGTTAGTAGTAGTAGACAGAAGAAGCGTGCAGCATTCCCAACTCTTCTTTCAGTTTTTCCTAAACAAGCACTTGGTCTTCTTTGTCAGACAAGTACGAATTCAGGACACTGGTTGAAGAGAAGAAACAGCTTTTATGGTTGGTGGTAATATGGATATTGTAATAGCTTTTTTTCTCAATTCTGTGTTGACCACAATACACATCCTATATGGACTTTTCTCTTCTTGTGTTTGTTTTGTCTTTAGGATTCTTTAGGCTCTATTACTATAGAATATCGCTTATAATTTTTCCTTTTCTTGTATCCTTATTTTTTTTTCTGCTGGGGAAGCAAAAAAATTAAATGTCCAATTAATATTTGTTGGGTTCT ATGGAAGGAGTTGGGGGCGACACGGCATCTGCAGTAGCACCTCTGGCCAAGTGGAGAAACGATTTTTCTAGAGCATTTCAATATTACTTGGATCGATCCACTCCTCACCCGGTCCAGAGGTGGTTGGGGACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTATGTTCAAGGGTTTTATGTTGTTTCCTATGGATTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTTTCGCCCAAGGTTGATCCTGAGCTCGATGTCTTGGATGGAGCTTCCTTGCCTACCAAAGGTTCTGATGAGTTTAAGCCTTTCATACGCCGGCTTCCGGAGTTCAAGTTTTGGTACGCCATCACCAAAGCTTTTTGTATTGCGTTCCTCATGACCTTCTTCTCGCTATTCGATGTTCCGGTTTTCTGGCCCATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAAATCATGCACATGATCAAATACAAATACATTCCTTTCAGCATAGGAAAACAGAGATATACGGGAAAGAGGTCTTCTGCAAGTAGCAGTGGCGTTTCAAGAGACTAA MEGVGGDTASAVAPLAKWRNDFSRAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITKAFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQRYTGKRSSASSSGVSRD*
BLAST of Cucsa.232090 vs. Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2) HSP 1 Score: 307.0 bits (785), Expect = 1.5e-82 Identity = 140/193 (72.54%), Postives = 168/193 (87.05%), Query Frame = 1
BLAST of Cucsa.232090 vs. Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 1.4e-77 Identity = 135/188 (71.81%), Postives = 160/188 (85.11%), Query Frame = 1
BLAST of Cucsa.232090 vs. Swiss-Prot
Match: RER1D_ARATH (Protein RER1D OS=Arabidopsis thaliana GN=At2g18240 PE=2 SV=2) HSP 1 Score: 250.4 bits (638), Expect = 1.6e-65 Identity = 114/164 (69.51%), Postives = 136/164 (82.93%), Query Frame = 1
BLAST of Cucsa.232090 vs. Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 6.7e-59 Identity = 99/183 (54.10%), Postives = 140/183 (76.50%), Query Frame = 1
BLAST of Cucsa.232090 vs. Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2) HSP 1 Score: 212.2 bits (539), Expect = 5.0e-54 Identity = 101/189 (53.44%), Postives = 136/189 (71.96%), Query Frame = 1
BLAST of Cucsa.232090 vs. TrEMBL
Match: A0A0A0LLG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361720 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 3.2e-108 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
BLAST of Cucsa.232090 vs. TrEMBL
Match: E0CQE9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g12720 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 7.9e-99 Identity = 173/194 (89.18%), Postives = 186/194 (95.88%), Query Frame = 1
BLAST of Cucsa.232090 vs. TrEMBL
Match: B9GRM1_POPTR (RER1B family protein OS=Populus trichocarpa GN=POPTR_0002s03560g PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 1.8e-98 Identity = 171/194 (88.14%), Postives = 184/194 (94.85%), Query Frame = 1
BLAST of Cucsa.232090 vs. TrEMBL
Match: B9R7W7_RICCO (Rer1 protein, putative OS=Ricinus communis GN=RCOM_1594900 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 4.3e-97 Identity = 165/194 (85.05%), Postives = 185/194 (95.36%), Query Frame = 1
BLAST of Cucsa.232090 vs. TrEMBL
Match: A0A067KQM9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04451 PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 5.7e-97 Identity = 168/194 (86.60%), Postives = 182/194 (93.81%), Query Frame = 1
BLAST of Cucsa.232090 vs. TAIR10
Match: AT2G21600.1 (AT2G21600.1 endoplasmatic reticulum retrieval protein 1B) HSP 1 Score: 307.0 bits (785), Expect = 8.4e-84 Identity = 140/193 (72.54%), Postives = 168/193 (87.05%), Query Frame = 1
BLAST of Cucsa.232090 vs. TAIR10
Match: AT4G39220.1 (AT4G39220.1 Rer1 family protein) HSP 1 Score: 290.4 bits (742), Expect = 8.1e-79 Identity = 135/188 (71.81%), Postives = 160/188 (85.11%), Query Frame = 1
BLAST of Cucsa.232090 vs. TAIR10
Match: AT2G18240.1 (AT2G18240.1 Rer1 family protein) HSP 1 Score: 250.4 bits (638), Expect = 9.3e-67 Identity = 114/164 (69.51%), Postives = 136/164 (82.93%), Query Frame = 1
BLAST of Cucsa.232090 vs. TAIR10
Match: AT2G23310.1 (AT2G23310.1 Rer1 family protein) HSP 1 Score: 228.4 bits (581), Expect = 3.8e-60 Identity = 99/183 (54.10%), Postives = 140/183 (76.50%), Query Frame = 1
BLAST of Cucsa.232090 vs. NCBI nr
Match: gi|449469973|ref|XP_004152693.1| (PREDICTED: protein RER1B [Cucumis sativus]) HSP 1 Score: 399.1 bits (1024), Expect = 4.6e-108 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
BLAST of Cucsa.232090 vs. NCBI nr
Match: gi|659087955|ref|XP_008444725.1| (PREDICTED: protein RER1B-like [Cucumis melo]) HSP 1 Score: 396.4 bits (1017), Expect = 3.0e-107 Identity = 192/194 (98.97%), Postives = 193/194 (99.48%), Query Frame = 1
BLAST of Cucsa.232090 vs. NCBI nr
Match: gi|1009134845|ref|XP_015884666.1| (PREDICTED: protein RER1B-like [Ziziphus jujuba]) HSP 1 Score: 370.2 bits (949), Expect = 2.3e-99 Identity = 172/194 (88.66%), Postives = 186/194 (95.88%), Query Frame = 1
BLAST of Cucsa.232090 vs. NCBI nr
Match: gi|720024409|ref|XP_010263624.1| (PREDICTED: protein RER1B [Nelumbo nucifera]) HSP 1 Score: 369.8 bits (948), Expect = 3.0e-99 Identity = 173/194 (89.18%), Postives = 185/194 (95.36%), Query Frame = 1
BLAST of Cucsa.232090 vs. NCBI nr
Match: gi|225458241|ref|XP_002282050.1| (PREDICTED: protein RER1B [Vitis vinifera]) HSP 1 Score: 367.9 bits (943), Expect = 1.1e-98 Identity = 173/194 (89.18%), Postives = 186/194 (95.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |