CmaCh12G004670 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G004670
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRer1 protein, putative
LocationCma_Chr12 : 2429802 .. 2432769 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGGAATCGTCTTCATTGATCGTTACTTCTCAATTACGGACTCGCTCCGATTCTCATCCATTTACTGTTCTTCCTCTTGCTTTTCGGATTATTCAAGGTTAGATTTCAGTTTCTGCTATTTTCTCGATTCCTTTTCCGAACCCTAGTTCTCCGATTTCATGGTTTTCTTCTGCTCAACTCGATTTCGTTCTGTAAATTCCATTTCTAATTGTTATTGCCGAGAACTGCTTTTGGATACTGCCATTTGGTTTCGTGGTTTGAAATCAGAGGAAGTAAAATGAGAACGGTCGGAAACAGGAGATCCAAAATTCGTTTGACTTTTCTTGTTCTTGGCGATAGATTAGATTGATGCTCTTATTTTGCTCTCGATCGTGTTTTGTTAACCTAATGTCATTGTTTACAATTCGAAGGATATTCTAGGGGATAATTTTTTATGGAAGGAGTTGAGGGCGACGCAGCCTCAGCAGTAGCTCCTCTGGCCAAATGGAGAAATGATTTTGCCAGAGCGTTTCAGTATTACTTGGATCGATCCACTCCTCACCCGGTTCAGAGGTGGTTGGGAACCCTTGTTGTTGCGGCGATTTATGTGTTGCGTGTTTTCTATGTTCAAGGGTTTTATGTTGTGTCGTATGGCTTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTATCGCCGAAGGTTGATCCTGAGCTTGATGTTTTAGACGGAGCTTCCTTGCCTACTAAAGGGTCTGATGAGTTCAGGCCGTTCATACGCCGACTTCCAGAGTTCAAGTTTTGGTATTCCTCTTGCATTAGCTTGTTTAGTAATTTTGATTTCTGCGTTTGATTGCATTCAATTTTGGATATAGTTTTTGGCTAATTGTTATGTGACCTCCGTTCTGGCCTTTTCTAGAAGTAACTAAAAGGATTTCATTGCTGAAAACTACTATCTGGTGCTGCATTTGGTATTTCAAAAACCTCAACCATTTTGTAAAAGGTTATACGGATTATATATATATATGTATATGTATATGTATATGTATATGTATATCTATAGAAAAAAATGTATTTATGTTACTGGCTCATATAAATTACAGGGTTTATGTTGAGAAGATATATCTCTATCCAAATTAACCTTTTTCAGGACAGAATGTACATCAGTGGATCATAGTTGTTTAGAGTGTATTATTTATTTCTGTAAGGCGCTTCTTGCCAAGTGTAAACATATTGAAAAAAACTTGTCGTCGCATGGGGATGGGGTGAATTTGATGATTTCATGGTGGAATAGTTTTATATTGTCAAGTGTCAACCTTATTTCAAACACCTGCCATTCCCTGAGGATGGAAATTCAATGAATTGTGAAAGTACTACTGTATTGGGTAGTGTTAGTGAATTGTGCAGCACTGCATACTGGTTGGCTTTGATGATTCCATTGTATTCTTAGAATTTTGGAGTGTCAAATTATAGCAAATGCTTGGTAGTGCTCGAGGCTGGAGTGAAATGGTTGGCTGCTTTGATGATATCATTTGGTTGAATTGATGGCTTTGTGGACTCTTAAATCTTTTTCTCATTTCTGTTCTTCAGGTATGCCATCACCAAAGCCTTTTGTATTGCCTTCTTCATGACCTTCTTCTCACTCTTTGACGTTCCTGTTTTCTGGCCTATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAAATCATGCACATGATCAAGTACAAATATATTCCTTTCAGCATTGGGAAACAGGTGAGGCAACAAGAACTTGGCTTATAGTCATGTAAACACCCCTCCTGCTCCCCTGGGCAAAAAACCAGGGAAAGAGAGAAACCACGTAGTCCCACCCCAAGGGAAAAAACCAGAGAGAGAGAGAGTAGCCATGTACTCCCTCCCCAGGGCAAGAATACAGAGAGAGACACCTCTCCCAGAGAGAGAGAGAGAACTTGTCCAATAGTCGTGTAGCACCCTTCCTGCTTCCCGGGGCATTAATCAGGGAGAGTAACCATGTACTCTCATCCCTGAGACAAATCATTGGAGGGGCTAAAACAATGTGACTAGTAATTTAGTGACATACAGACTTCAAACATGTGTCCAATGGTTAGTTGGGGCAGATCCAAAAAACAGAGAGGCATCCTTCTCACCCCGGGGCAAGAGAGATAGTATAACGACCCTAGATTTCCACTTATCTAGAGTCGCTACCATCATCATGATGTAATCATTTTTCAGTCATCCTAATGTAACATATGGCAGTGTTTTAAGAATGTTAGCTACAAGAGATTGTGAGATCCCACATTGGTTGGGGAGGAAAACGAATAATTCTTTATAAGTATGTGAAAACCTCTCTCTAACAGACGCGTTTTAAAAACCTTGAGGGGAAGTCCGAAGGAGAAATCCCAAAGAGAATAGTAACTACTAGCAGTGAGCTTGGGCCGTTGTCGATAAGGAGGTTCCAAACATTGTAACTAATGCAGCTTTTCTCCTTTGTTTTGTGGCAGAAATATGCAGGAAAGAGGTCTTCTGCAAGTAGCAGTGGCGTTTCAAGAGACTAAGTTCCATCATTCCCCTTCTGGTTAGTAGTAGACAGAAGTGTGCAGCATTCCAACTCTTCTTTAGGTTTTCCGGTCAGAGCACCGGTTGAAGAGACAAGGTAAGGAGAAAATGTTAGAAGTGAACCACGTTCGAGTGCTTCTGTCTTCGAGCCATTGCCTAAGTGTTAATGTGGATGTTGTAATAGATTTTCTCATCTGTGTTGACCACAATATATCCTATACTTAGTTTTTCTTCTTCTGTTTGTTTTGTCTAGGACTTTAGGCTCTAATACTATAATTTTCTTTTCTGTATTTTTATTTTTTTTTCTTTTCTGATGGGAAAAAAATGAAAATATCCAATTAATATTTGTTGGGTTCAGTTAAAAGATACGTACGTGTGCTCTTTCGACATCCTACACAGTAAAGAAGGCTCATACG

mRNA sequence

AACGGAATCGTCTTCATTGATCGTTACTTCTCAATTACGGACTCGCTCCGATTCTCATCCATTTACTGTTCTTCCTCTTGCTTTTCGGATTATTCAAGGATATTCTAGGGGATAATTTTTTATGGAAGGAGTTGAGGGCGACGCAGCCTCAGCAGTAGCTCCTCTGGCCAAATGGAGAAATGATTTTGCCAGAGCGTTTCAGTATTACTTGGATCGATCCACTCCTCACCCGGTTCAGAGGTGGTTGGGAACCCTTGTTGTTGCGGCGATTTATGTGTTGCGTGTTTTCTATGTTCAAGGGTTTTATGTTGTGTCGTATGGCTTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTATCGCCGAAGGTTGATCCTGAGCTTGATGTTTTAGACGGAGCTTCCTTGCCTACTAAAGGGTCTGATGAGTTCAGGCCGTTCATACGCCGACTTCCAGAGTTCAAGTTTTGGTATGCCATCACCAAAGCCTTTTGTATTGCCTTCTTCATGACCTTCTTCTCACTCTTTGACGTTCCTGTTTTCTGGCCTATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAAATCATGCACATGATCAAGTACAAATATATTCCTTTCAGCATTGGGAAACAGAAATATGCAGGAAAGAGGTCTTCTGCAAGTAGCAGTGGCGTTTCAAGAGACTAAGTTCCATCATTCCCCTTCTGGTTAGTAGTAGACAGAAGTGTGCAGCATTCCAACTCTTCTTTAGGTTTTCCGGTCAGAGCACCGGTTGAAGAGACAAGGTAAGGAGAAAATGTTAGAAGTGAACCACGTTCGAGTGCTTCTGTCTTCGAGCCATTGCCTAAGTGTTAATGTGGATGTTGTAATAGATTTTCTCATCTGTGTTGACCACAATATATCCTATACTTAGTTTTTCTTCTTCTGTTTGTTTTGTCTAGGACTTTAGGCTCTAATACTATAATTTTCTTTTCTGTATTTTTATTTTTTTTTCTTTTCTGATGGGAAAAAAATGAAAATATCCAATTAATATTTGTTGGGTTCAGTTAAAAGATACGTACGTGTGCTCTTTCGACATCCTACACAGTAAAGAAGGCTCATACG

Coding sequence (CDS)

ATGGAAGGAGTTGAGGGCGACGCAGCCTCAGCAGTAGCTCCTCTGGCCAAATGGAGAAATGATTTTGCCAGAGCGTTTCAGTATTACTTGGATCGATCCACTCCTCACCCGGTTCAGAGGTGGTTGGGAACCCTTGTTGTTGCGGCGATTTATGTGTTGCGTGTTTTCTATGTTCAAGGGTTTTATGTTGTGTCGTATGGCTTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTATCGCCGAAGGTTGATCCTGAGCTTGATGTTTTAGACGGAGCTTCCTTGCCTACTAAAGGGTCTGATGAGTTCAGGCCGTTCATACGCCGACTTCCAGAGTTCAAGTTTTGGTATGCCATCACCAAAGCCTTTTGTATTGCCTTCTTCATGACCTTCTTCTCACTCTTTGACGTTCCTGTTTTCTGGCCTATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAAATCATGCACATGATCAAGTACAAATATATTCCTTTCAGCATTGGGAAACAGAAATATGCAGGAAAGAGGTCTTCTGCAAGTAGCAGTGGCGTTTCAAGAGACTAA

Protein sequence

MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYAGKRSSASSSGVSRD
Homology
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BLAST of CmaCh12G004670 vs. Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2)

HSP 1 Score: 289.3 bits (739), Expect = 3.2e-77
Identity = 139/193 (72.02%), Postives = 166/193 (86.01%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           MEG  GD+ S   P+ K  ++  R +QYYLD++TPH   RW+GTLV   IY LRV+ + G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY++SYGLGIY+LNLLIGFLSP VDPEL+V DGA+LPT+GSDEF+PFIRRLPEFKFWY++
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFCIAF MTFFS+FDVPVFWPILLCYW+VLFVLTM+RQI HMIK+KYIPFSIGKQKY+
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 180

Query: 181 GKRSSASSSGVSR 194
           G++SSA+S G SR
Sbjct: 181 GRKSSANSGGGSR 193

[Close]
BLAST of CmaCh12G004670 vs. Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.1e-72
Identity = 134/188 (71.28%), Postives = 158/188 (84.04%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           M+   GD+ S   P+ +  ++  R +Q+YLD++TPH   RW+GTLVVA IY LRV+Y+QG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELD-VLDGASLPTKGSDEFRPFIRRLPEFKFWYA 120
           FY+++YGLGIY+LNLLIGFLSP VDPE   V DG SLPT+GSDEF+PFIRRLPEFKFWY+
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 ITKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKY 180
           +TKAFCIAF MTFFS+FDVPVFWPILLCYWIVLFVLTM+RQI HMIKYKYIPFS GKQKY
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKY 180

Query: 181 AGKRSSAS 188
            G+ SS S
Sbjct: 181 GGRSSSGS 188

[Close]
BLAST of CmaCh12G004670 vs. Swiss-Prot
Match: RER1D_ARATH (Protein RER1D OS=Arabidopsis thaliana GN=At2g18240 PE=2 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 3.8e-62
Identity = 118/175 (67.43%), Postives = 141/175 (80.57%), Query Frame = 1 

Query: 3   GVEGDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQGF 62
           G E +A + VA PLAKWR +F+++FQ YLDRS P+ V+RWL TLV A IY+ RV+ V G+
Sbjct: 6   GSENEADTIVASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGY 65

Query: 63  YVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAIT 122
           +V+SYGL  YILNLLIGFLSPKVDPEL+ LD  SLP   SDE++PF+RRLPEFKFWYA T
Sbjct: 66  FVISYGLATYILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAAT 125

Query: 123 KAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGK 177
           KAF +AF MTFFS  DVPVFWPILLCYW+VL+ LTMKR I+HM KY+Y PF + K
Sbjct: 126 KAFVVAFVMTFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]
BLAST of CmaCh12G004670 vs. Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54
Identity = 99/183 (54.10%), Postives = 139/183 (75.96%), Query Frame = 1 

Query: 7   DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQGFYVVSY 66
           D++S    + +  + F++  Q+ LD++ PH + RW+  L V  IY++RV++V+GFY+++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCI 126
            +GIY+LNL+I FLSP+ DPE  +  G SLPT+ SDE+RPF+RRLPEFKFW +I +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYAGKRSSA 186
            F MTFF +FDVPVFWPILL YW++LF LTM++QI HMIKY+Y+PFS GK++Y  K +  
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQYGKKPAPT 208

Query: 187 SSS 190
            SS
Sbjct: 209 ESS 211

[Close]
BLAST of CmaCh12G004670 vs. Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2)

HSP 1 Score: 198.0 bits (502), Expect = 9.7e-50
Identity = 100/165 (60.61%), Postives = 127/165 (76.97%), Query Frame = 1 

Query: 26  FQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVD 85
           +Q +LD+STPH   RW+ TL ++ IY++RV+ +QG+Y+V+Y LGIY LNL I FLSPKVD
Sbjct: 29  YQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVD 88

Query: 86  PEL--DVLDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCIAFFMTFFSLFDVPVFWP 145
           P L  D  DG SLPTK ++EFRPFIRRLPEFKFW+A TK   +A   TFF  F+VPVFWP
Sbjct: 89  PSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFEAFNVPVFWP 148

Query: 146 ILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYAGKRSSASS 189
           IL+ Y+I+LF +TMKRQI HMIKY+YIPF+ GK+ Y GK  +  +
Sbjct: 149 ILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRTYKGKEDAGKA 193

[Close]
BLAST of CmaCh12G004670 vs. TrEMBL
Match: A0A0A0LLG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361720 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 5.4e-100
Identity = 186/194 (95.88%), Postives = 190/194 (97.94%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           MEGV GD ASAVAPLAKWRNDF+RAFQYYLDRSTPHPVQRWLGTL+VAAIYVLRVFYVQG
Sbjct: 1   MEGVGGDTASAVAPLAKWRNDFSRAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEF+PFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFCIAF MTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ+Y 
Sbjct: 121 TKAFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQRYT 180

Query: 181 GKRSSASSSGVSRD 195
           GKRSSASSSGVSRD
Sbjct: 181 GKRSSASSSGVSRD 194

[Close]
BLAST of CmaCh12G004670 vs. TrEMBL
Match: E0CQE9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g12720 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 7.6e-94
Identity = 170/194 (87.63%), Postives = 186/194 (95.88%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           ME VEGDAAS VAPLAKW+NDF+RAFQ+YLD+STPHPV RWLGTL VAAIYVLRV+YVQG
Sbjct: 1   MERVEGDAASTVAPLAKWKNDFSRAFQHYLDKSTPHPVHRWLGTLAVAAIYVLRVYYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY+VSYGLGIYILNLLIGFLSPKVDPEL+VLDGASLPTKGSDEF+PFIRRLPEFKFWY+I
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFC+AF MTFFS+FDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKY+PFSIGKQ+Y 
Sbjct: 121 TKAFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSIGKQRYT 180

Query: 181 GKRSSASSSGVSRD 195
           GK+S+ASS G+ RD
Sbjct: 181 GKKSAASSRGLPRD 194

[Close]
BLAST of CmaCh12G004670 vs. TrEMBL
Match: B9GRM1_POPTR (RER1B family protein OS=Populus trichocarpa GN=POPTR_0002s03560g PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.4e-92
Identity = 167/194 (86.08%), Postives = 183/194 (94.33%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           MEG  GDAA+ V P+AKWRNDF+RAFQYYLDRSTPHP+QRWLGTL VAAIYVLRVFY QG
Sbjct: 1   MEGNGGDAANVVGPVAKWRNDFSRAFQYYLDRSTPHPMQRWLGTLAVAAIYVLRVFYAQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY+VSYGLGIYILNLLIGFLSPKVDPEL+VLDGASLPTKGSDEF+PFIRRLPEFKFWYAI
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFC+AF MTFFS+FDVPVFWPILLCYWIVLFVLTMKRQ+MHM+KYKY+PFS+GKQ+Y 
Sbjct: 121 TKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQLMHMMKYKYVPFSLGKQRYG 180

Query: 181 GKRSSASSSGVSRD 195
            K+S ASSSG+ RD
Sbjct: 181 KKKSDASSSGLMRD 194

[Close]
BLAST of CmaCh12G004670 vs. TrEMBL
Match: B9R7W7_RICCO (Rer1 protein, putative OS=Ricinus communis GN=RCOM_1594900 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 6.7e-90
Identity = 159/194 (81.96%), Postives = 182/194 (93.81%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           MEG  GD  S VAP AKWRN+F+R FQYYLDRSTP+P++RWLGTL  +AIY+LRV+Y QG
Sbjct: 1   MEGAGGDTDSIVAPFAKWRNEFSRTFQYYLDRSTPYPMERWLGTLAASAIYMLRVYYAQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY+VSYGLGIYILNLLIGFLSPKVDPEL+VLDGASLPTKGSDEF+PFIRRLPEFKFWY+I
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFC+AF MTFFS+FDVPVFWPILLCYW+VLFVLTMKRQIMHMIKYKY+PFS+GKQ+Y+
Sbjct: 121 TKAFCVAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVPFSVGKQRYS 180

Query: 181 GKRSSASSSGVSRD 195
           GK+S+ASSSG+ +D
Sbjct: 181 GKKSAASSSGILKD 194

[Close]
BLAST of CmaCh12G004670 vs. TrEMBL
Match: A0A067KQM9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04451 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 8.7e-90
Identity = 162/194 (83.51%), Postives = 179/194 (92.27%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           MEG  GD A  +APLAKWRN+F+ AFQYYLDRSTPHP++RWLGTL  AAIYVLRV+YVQG
Sbjct: 1   MEGAGGDTAPTMAPLAKWRNNFSMAFQYYLDRSTPHPMERWLGTLAAAAIYVLRVYYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY+VSYGLGIYILNLLIGFLSPKVDPEL+VLDG SLPTK SDEF+PF+RRLPEFKFWY+I
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGGSLPTKESDEFKPFVRRLPEFKFWYSI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFC+AF MTFFS+FDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKY+PFS GKQ+Y+
Sbjct: 121 TKAFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSFGKQRYS 180

Query: 181 GKRSSASSSGVSRD 195
           GK S ASS G+SRD
Sbjct: 181 GKNSIASSGGMSRD 194

[Close]
BLAST of CmaCh12G004670 vs. TAIR10
Match: AT2G21600.1 (AT2G21600.1 endoplasmatic reticulum retrieval protein 1B)

HSP 1 Score: 289.3 bits (739), Expect = 1.8e-78
Identity = 139/193 (72.02%), Postives = 166/193 (86.01%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           MEG  GD+ S   P+ K  ++  R +QYYLD++TPH   RW+GTLV   IY LRV+ + G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY++SYGLGIY+LNLLIGFLSP VDPEL+V DGA+LPT+GSDEF+PFIRRLPEFKFWY++
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFCIAF MTFFS+FDVPVFWPILLCYW+VLFVLTM+RQI HMIK+KYIPFSIGKQKY+
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 180

Query: 181 GKRSSASSSGVSR 194
           G++SSA+S G SR
Sbjct: 181 GRKSSANSGGGSR 193

[Close]
BLAST of CmaCh12G004670 vs. TAIR10
Match: AT4G39220.1 (AT4G39220.1 Rer1 family protein)

HSP 1 Score: 274.2 bits (700), Expect = 6.0e-74
Identity = 134/188 (71.28%), Postives = 158/188 (84.04%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           M+   GD+ S   P+ +  ++  R +Q+YLD++TPH   RW+GTLVVA IY LRV+Y+QG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELD-VLDGASLPTKGSDEFRPFIRRLPEFKFWYA 120
           FY+++YGLGIY+LNLLIGFLSP VDPE   V DG SLPT+GSDEF+PFIRRLPEFKFWY+
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 ITKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKY 180
           +TKAFCIAF MTFFS+FDVPVFWPILLCYWIVLFVLTM+RQI HMIKYKYIPFS GKQKY
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKY 180

Query: 181 AGKRSSAS 188
            G+ SS S
Sbjct: 181 GGRSSSGS 188

[Close]
BLAST of CmaCh12G004670 vs. TAIR10
Match: AT2G18240.1 (AT2G18240.1 Rer1 family protein)

HSP 1 Score: 239.2 bits (609), Expect = 2.1e-63
Identity = 118/175 (67.43%), Postives = 141/175 (80.57%), Query Frame = 1 

Query: 3   GVEGDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQGF 62
           G E +A + VA PLAKWR +F+++FQ YLDRS P+ V+RWL TLV A IY+ RV+ V G+
Sbjct: 6   GSENEADTIVASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGY 65

Query: 63  YVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAIT 122
           +V+SYGL  YILNLLIGFLSPKVDPEL+ LD  SLP   SDE++PF+RRLPEFKFWYA T
Sbjct: 66  FVISYGLATYILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAAT 125

Query: 123 KAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGK 177
           KAF +AF MTFFS  DVPVFWPILLCYW+VL+ LTMKR I+HM KY+Y PF + K
Sbjct: 126 KAFVVAFVMTFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]
BLAST of CmaCh12G004670 vs. TAIR10
Match: AT2G23310.1 (AT2G23310.1 Rer1 family protein)

HSP 1 Score: 214.2 bits (544), Expect = 7.3e-56
Identity = 99/183 (54.10%), Postives = 139/183 (75.96%), Query Frame = 1 

Query: 7   DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQGFYVVSY 66
           D++S    + +  + F++  Q+ LD++ PH + RW+  L V  IY++RV++V+GFY+++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCI 126
            +GIY+LNL+I FLSP+ DPE  +  G SLPT+ SDE+RPF+RRLPEFKFW +I +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYAGKRSSA 186
            F MTFF +FDVPVFWPILL YW++LF LTM++QI HMIKY+Y+PFS GK++Y  K +  
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQYGKKPAPT 208

Query: 187 SSS 190
            SS
Sbjct: 209 ESS 211

[Close]
BLAST of CmaCh12G004670 vs. NCBI nr
Match: gi|449469973|ref|XP_004152693.1| (PREDICTED: protein RER1B [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 7.8e-100
Identity = 186/194 (95.88%), Postives = 190/194 (97.94%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           MEGV GD ASAVAPLAKWRNDF+RAFQYYLDRSTPHPVQRWLGTL+VAAIYVLRVFYVQG
Sbjct: 1   MEGVGGDTASAVAPLAKWRNDFSRAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEF+PFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFCIAF MTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ+Y 
Sbjct: 121 TKAFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQRYT 180

Query: 181 GKRSSASSSGVSRD 195
           GKRSSASSSGVSRD
Sbjct: 181 GKRSSASSSGVSRD 194

[Close]
BLAST of CmaCh12G004670 vs. NCBI nr
Match: gi|659087955|ref|XP_008444725.1| (PREDICTED: protein RER1B-like [Cucumis melo])

HSP 1 Score: 371.3 bits (952), Expect = 1.0e-99
Identity = 186/194 (95.88%), Postives = 189/194 (97.42%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           MEGV GD ASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTL+VAAIYVLRVFYVQG
Sbjct: 1   MEGVGGDTASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEF+PFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFCIAF MTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ+Y 
Sbjct: 121 TKAFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQRYT 180

Query: 181 GKRSSASSSGVSRD 195
           GKRSSASSSG SRD
Sbjct: 181 GKRSSASSSGASRD 194

[Close]
BLAST of CmaCh12G004670 vs. NCBI nr
Match: gi|225458241|ref|XP_002282050.1| (PREDICTED: protein RER1B [Vitis vinifera])

HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93
Identity = 170/194 (87.63%), Postives = 186/194 (95.88%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           ME VEGDAAS VAPLAKW+NDF+RAFQ+YLD+STPHPV RWLGTL VAAIYVLRV+YVQG
Sbjct: 1   MERVEGDAASTVAPLAKWKNDFSRAFQHYLDKSTPHPVHRWLGTLAVAAIYVLRVYYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY+VSYGLGIYILNLLIGFLSPKVDPEL+VLDGASLPTKGSDEF+PFIRRLPEFKFWY+I
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFC+AF MTFFS+FDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKY+PFSIGKQ+Y 
Sbjct: 121 TKAFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSIGKQRYT 180

Query: 181 GKRSSASSSGVSRD 195
           GK+S+ASS G+ RD
Sbjct: 181 GKKSAASSRGLPRD 194

[Close]
BLAST of CmaCh12G004670 vs. NCBI nr
Match: gi|720024409|ref|XP_010263624.1| (PREDICTED: protein RER1B [Nelumbo nucifera])

HSP 1 Score: 348.6 bits (893), Expect = 7.1e-93
Identity = 169/194 (87.11%), Postives = 184/194 (94.85%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           MEG  GDAASAVAP+AKWRNDF+RAFQYYLDRSTPHPVQRWLGTL VAA+YVLRV+YVQG
Sbjct: 1   MEGPGGDAASAVAPIAKWRNDFSRAFQYYLDRSTPHPVQRWLGTLAVAAVYVLRVYYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY+VSYGLGIY+LNLLIGFLSPKVDPEL+ LDGASLPTKGSDEF+PFIRRLPEFKFWY+I
Sbjct: 61  FYIVSYGLGIYVLNLLIGFLSPKVDPELEGLDGASLPTKGSDEFKPFIRRLPEFKFWYSI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFCIAF MTFFS+FDVPVFWPILLCYWIVLFVLTMKRQI+HMIKYKY+P SIGKQ+Y 
Sbjct: 121 TKAFCIAFAMTFFSMFDVPVFWPILLCYWIVLFVLTMKRQILHMIKYKYVPISIGKQRYT 180

Query: 181 GKRSSASSSGVSRD 195
           GK+SS S S +SRD
Sbjct: 181 GKKSSPSGSAMSRD 194

[Close]
BLAST of CmaCh12G004670 vs. NCBI nr
Match: gi|743850934|ref|XP_011028859.1| (PREDICTED: protein RER1B-like [Populus euphratica])

HSP 1 Score: 347.8 bits (891), Expect = 1.2e-92
Identity = 168/194 (86.60%), Postives = 183/194 (94.33%), Query Frame = 1 

Query: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60
           MEG  GDAA+ V P+AKWRNDF+RAFQYYLDRSTPHP+QRWLGTL VAAIYVLRVFY QG
Sbjct: 1   MEGNGGDAANVVGPVAKWRNDFSRAFQYYLDRSTPHPMQRWLGTLAVAAIYVLRVFYAQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY+VSYGLGIYILNLLIGFLSPKVDPEL+VLDGASLPTKGSDEF+PFIRRLPEFKFWYAI
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQKYA 180
           TKAFC+AF MTFFS+FDVPVFWPILLCYWIVLFVLTMKRQIMHM+KYKY+PFS+GKQ+Y 
Sbjct: 121 TKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQIMHMMKYKYVPFSLGKQRYG 180

Query: 181 GKRSSASSSGVSRD 195
            K+S ASSSG+ RD
Sbjct: 181 KKKSDASSSGLMRD 194

The following BLAST results are available for this feature:
BLAST of CmaCh12G004670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RER1B_ARATH3.2e-7772.02Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2[more]
RER1A_ARATH1.1e-7271.28Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1[more]
RER1D_ARATH3.8e-6267.43Protein RER1D OS=Arabidopsis thaliana GN=At2g18240 PE=2 SV=2[more]
RER1C_ARATH1.3e-5454.10Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1[more]
RER1_BOVIN9.7e-5060.61Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2[more]
BLAST of CmaCh12G004670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLG7_CUCSA5.4e-10095.88Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361720 PE=4 SV=1[more]
E0CQE9_VITVI7.6e-9487.63Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g12720 PE=4 SV=... [more]
B9GRM1_POPTR1.4e-9286.08RER1B family protein OS=Populus trichocarpa GN=POPTR_0002s03560g PE=4 SV=1[more]
B9R7W7_RICCO6.7e-9081.96Rer1 protein, putative OS=Ricinus communis GN=RCOM_1594900 PE=4 SV=1[more]
A0A067KQM9_JATCU8.7e-9083.51Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04451 PE=4 SV=1[more]
BLAST of CmaCh12G004670 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G21600.11.8e-7872.02 endoplasmatic reticulum retrieval protein 1B[more]
AT4G39220.16.0e-7471.28 Rer1 family protein[more]
AT2G18240.12.1e-6367.43 Rer1 family protein[more]
AT2G23310.17.3e-5654.10 Rer1 family protein[more]
BLAST of CmaCh12G004670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469973|ref|XP_004152693.1|7.8e-10095.88PREDICTED: protein RER1B [Cucumis sativus][more]
gi|659087955|ref|XP_008444725.1|1.0e-9995.88PREDICTED: protein RER1B-like [Cucumis melo][more]
gi|225458241|ref|XP_002282050.1|1.1e-9387.63PREDICTED: protein RER1B [Vitis vinifera][more]
gi|720024409|ref|XP_010263624.1|7.1e-9387.11PREDICTED: protein RER1B [Nelumbo nucifera][more]
gi|743850934|ref|XP_011028859.1|1.2e-9286.60PREDICTED: protein RER1B-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G004670.1CmaCh12G004670.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PIRPIRSF016013AtER_Rer1pcoord: 1..190
score: 1.5
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 1..194
score: 6.5E
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 18..179
score: 2.6
NoneNo IPR availablePANTHERPTHR10743:SF2PROTEIN RER1B-RELATEDcoord: 1..194
score: 6.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh12G004670Cucsa.232090Cucumber (Gy14) v1cgycmaB0638
CmaCh12G004670Cla022487Watermelon (97103) v1cmawmB148
CmaCh12G004670Csa2G361720Cucumber (Chinese Long) v2cmacuB174
CmaCh12G004670MELO3C010950Melon (DHL92) v3.5.1cmameB156
CmaCh12G004670ClCG08G014980Watermelon (Charleston Gray)cmawcgB169
CmaCh12G004670CSPI02G20130Wild cucumber (PI 183967)cmacpiB175
CmaCh12G004670CmoCh05G002560Cucurbita moschata (Rifu)cmacmoB199
CmaCh12G004670CmoCh12G004160Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G004670Lsi08G013890Bottle gourd (USVL1VR-Ls)cmalsiB184
CmaCh12G004670Cp4.1LG11g02110Cucurbita pepo (Zucchini)cmacpeB179
CmaCh12G004670Cp4.1LG07g04190Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G004670MELO3C010950.2Melon (DHL92) v3.6.1cmamedB170
CmaCh12G004670CsaV3_2G028800Cucumber (Chinese Long) v3cmacucB0203
CmaCh12G004670Cla97C08G158560Watermelon (97103) v2cmawmbB194
CmaCh12G004670Bhi03G000719Wax gourdcmawgoB0218
CmaCh12G004670Bhi04G000155Wax gourdcmawgoB0208
CmaCh12G004670CsGy2G019900Cucumber (Gy14) v2cgybcmaB179
CmaCh12G004670Carg11793Silver-seed gourdcarcmaB0249
CmaCh12G004670Carg04048Silver-seed gourdcarcmaB1349
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh12G004670CmaCh05G002510Cucurbita maxima (Rimu)cmacmaB199
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G004670Cucurbita moschata (Rifu)cmacmoB165
CmaCh12G004670Cucurbita moschata (Rifu)cmacmoB183
CmaCh12G004670Wild cucumber (PI 183967)cmacpiB185
CmaCh12G004670Cucumber (Chinese Long) v2cmacuB183
CmaCh12G004670Melon (DHL92) v3.5.1cmameB167
CmaCh12G004670Watermelon (Charleston Gray)cmawcgB160
CmaCh12G004670Watermelon (97103) v1cmawmB159
CmaCh12G004670Cucurbita pepo (Zucchini)cmacpeB190
CmaCh12G004670Cucurbita pepo (Zucchini)cmacpeB198
CmaCh12G004670Bottle gourd (USVL1VR-Ls)cmalsiB175
CmaCh12G004670Cucumber (Gy14) v2cgybcmaB303
CmaCh12G004670Melon (DHL92) v3.6.1cmamedB182
CmaCh12G004670Silver-seed gourdcarcmaB0135
CmaCh12G004670Silver-seed gourdcarcmaB1292
CmaCh12G004670Cucumber (Chinese Long) v3cmacucB0213
CmaCh12G004670Watermelon (97103) v2cmawmbB181
CmaCh12G004670Cucurbita maxima (Rimu)cmacmaB034
CmaCh12G004670Cucurbita maxima (Rimu)cmacmaB182
CmaCh12G004670Cucumber (Gy14) v1cgycmaB0925