Cucsa.202080 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGGAAATTTAGAAGGAAAAGTGAAATTGAAGAGAGTTGGAGGAAAGGGTAAAGCAGAGGAAGAAGAAGAAGAAGAAAATGGGAGTAGAAGGGCATGTTTTGAAGCGAATTCCACGCATTAAATTCCCTGATAGACACCCGAAATCATCCTCGTCTTCAGGTTCCTTTCTTTTTCATTTACTCATTACGTTTTTCCTTTTCTGGTTTTATCTGTTGCAATTTTTACTAACATGAATCTCGTGGATGTGATTTTGTTTTCTGTGGCATATAGATTGCTTCTTTGTTTGCTTGCCTGTTCACAATTTCGCTGAGTTTGGAAATTGAAGCTAATTTTTGTTTtCTTCCGGTCTGTTAGGTTGTGTAGAAATTAAAaTTCAATTGGTTTTGAGCTGACTTAAATAGAAACTCACCAGGTTACAACCTGGGTCATTTTTtGGGTTTCTGTGGAAGTGGAAGATTTATATACACACACACACATACATACATACATGTAGGATCTGTTTGGCTGTGTAATAAACATAAACTCATTGGGTATTTGGGTTAGAAACTGAGTCAATTGCTTTGTGAATTGAAGTTTTTTTtGTCTGGTTATTCGAGTGCAAGTAAACTGACTGATTTAGAACTGGGTCAATTGTTTGTTGTTGTTGTTGTAGAAGATGTTCTGTTACTTTGTTTGCATAGAATCTGAAACTCCATGGGTTAGAGAATGGGTGAATTTCCTTGTTGTTTTGGAAGATTCTTTTATCTGTTTGTTGTCTAGAAGTAGAACAGAAATTTACTGCATTTAGAAACTGAGTAAATTGTGTTGTTTGGTGGTATTATACGGAAACAGAAACTCAATGGGTGTAGAAGCTGTTCCAGCATTTTTGTTCTCGTGGAAGATTTTTCTTCTTTCTGTTATGTGGTACAGAGATACTAAGAAGCACGGATATTTTTGTTTGGAATTTCAAATACTTCGATGCTCCTAGGCTTATTGGGGTTGTGTTTTATACTTTTTAGCACAATAAACCTGCGTCAAACACCAATGGTACAAAACTAATACGAGTCCAAAACTTGTGAATCACATATCTAGCTCTTCCTAAACACGATAAACTGACATAGTATTTTAGGACAAAATTAATATATTCTGAGAACATAATGTATCAAACTCATTTTTAAGCATGTGAATGGTATTGTACGGTTTCAGGGAGCTGAAGAAGAGGCTATATGAATTAGTTAGGGTTAGAGGCAAGTGCCCAACTAAGATTGGCTAAATGGAAACTGTAAAATAAATCTAAAAAAGGTCAATAGTGTTAAAGCAAAGAATTAGACACAGCACATAATATGTATATAAATATGTCTTACAACTATTGACTTCGAATCCATTCTAGTATAAGAATGATGTATATTTAAAAATTTATACTTTAATAAACATGTATTTGCCTTTTTCGTGTCCTAGATTTTTCTTAAAAGGATATGTCGTTTTGTTTGTGTCGTGTCTTATACTTTTTCCAATATGCATATCCATGTTTGTGCTTCTTATACAAAAGCTCAACTTGTTATAAAATTTAGGTGAGATTCAGTTTGCTTGAGGGAAGTAATTCTTTGGTTTTTAAGATATAAAAGCATCTGCCTTAGGTTACTCTGCAATTTTTCATCACCTAGCTGTGGAAAGGTTTGAAGTTAATTTGAATGTCTAAGGTACCGTTGGATAAGAACTTTGTAATTGAATACTGTTTTTGATAATGAGCTTGTTTTCTTATTTTTATTTTATTTTTTtACTATGGATTTCACCTTCCATACTGAAACAATCCAAACACTCAAAACTACATTTTTTtCTAGTTTTCAAAATTTGGTTTGGATTTTGAAAATATGGAGCAGATAACAACAATAGGTGAGAGTAATGTTTATGAGCTTAATTTTCAAAAAAaCAAATGGTTATCAAATGGAGATACGTGAGTAAAATTCATGTGAATTTTCTGCTAAGACAATGTACTTCTCCCTATCTTTTTCTCATCTAAATCTATATGGTTTCAATTTGGTTATCTGCCAAATGGTAAGATTTTATTACGTCTTAAATTTTTTtCAGCCTTAATATCAACTGAACATTTTAAATTCTTATTAATAATACTCGGAACTGGTAAGGCTGTTTATCTGGCATTTGCTGTATTGAATTTTTTCCACTTGTGCTTGCATTTGAAGTAGTTTCAGTCAGATTAGCTTGCATTTAACTCCATTTATGATGTTTGCTCATCTAGATTCTTCAACTTGCTATCGTTTCCACAGATTTGAAACAAGATAATTCGTATTTTTTTtCAAATGCTTTCTCATTCTAAGTTGTATCTTATTTTGCTAGTCTGATAAATCTTACAATTTCATCCTTTAGGTTCTGCTCTCCAGTCTCAGCACAACCCCGATAAGGACATTGGCTACTATGCACTTTCAGGTTCCAATGTGCCAGCACCACCCCAAAACATGGCTGTGGGGGGTAAAGCATCGCTCCTGCCAAAGCGTACACCTGTTTCGGACAGAGAGATAGAGGCTATACTGGTAAGCAAAACAGTATTTCTTTCCGGCTACAGTGTTAACAGTTACACATGGGTGTGAGGGGAGAGCAGAGAACATTTTGAAAAACAGTAGATATCATATAAATAAGTTTATAAAATTAAAATGAAATTTCTTTATCTTAATTCACTTTTAGGCATTCATTTTGCATTTTAAAGGTAAaTAATAATAAAATAATACTTTTACTTTTtATTTtGAAAAACAAATGAAAACATAAACATGATTCAAGAAACTTGGTTTTGTTGTTTCCAAAATTTCTACCCAACTTTGAAAACATTTCTGAAAAATGAGAAACAAGAAAAGAAAGAAAAACAGATACCAAATGCTTCTGTTTCTAAAAAATAGGAA ATTGGAAATTTAGAAGGAAAAGTGAAATTGAAGAGAGTTGGAGGAAAGGGTAaagcagaggaagaagaagaagaagaaAATGGGAGTAGAAGGGCATGTTTTGAAGCGAATTCCACGCATTAAATTCCCTGATAGACACCCGAAATCATCCTCGTCTTCAGGTTCTGCTCTCCAGTCTCAGCACAACCCCGATAAGGACATTGGCTACTATGCACTTTCAGGTTCCAATGTGCCAGCACCACCCCAAAACATGGCTGTGGGGGGTAAAGCATCGCTCCTGCCAAAGCGTACACCTGTTTCGGACAGAGAGATAGAGGCTATACTGGTAAGCAAAACAGTATTTCTTTCCGGCTACAGTGTTAACAGTTACACATGGGTGTGAGGGGAGAGCAGAGAACATTTTGAAAAACAGTAGATATCATATAAATAAGTTTATAAAATTAAAATGAAATTTCTTTATCTTAATTCACTTTTAGGCATTCATTTTGCATTTTAAAGGtaaataataataaaataatacttttactttttattttGAAAAACAAATGAAAACATAAACATGATTCAAGAAACTTGGTTTTGTTGTTTCCAAAATTTCTACCCAACTTTGAAAACATTTCTGAAAAATGAGAAACAAGAAAAGAAAGAAAAACAGATACCAAATGCTTCTGTTTCTAAAAAATAGGAA ATGGGAGTAGAAGGGCATGTTTTGAAGCGAATTCCACGCATTAAATTCCCTGATAGACACCCGAAATCATCCTCGTCTTCAGGTTCTGCTCTCCAGTCTCAGCACAACCCCGATAAGGACATTGGCTACTATGCACTTTCAGGTTCCAATGTGCCAGCACCACCCCAAAACATGGCTGTGGGGGGTAAAGCATCGCTCCTGCCAAAGCGTACACCTGTTTCGGACAGAGAGATAGAGGCTATACTGGTAAGCAAAACAGTATTTCTTTCCGGCTACAGTGTTAACAGTTACACATGGGTGTGA MGVEGHVLKRIPRIKFPDRHPKSSSSSGSALQSQHNPDKDIGYYALSGSNVPAPPQNMAVGGKASLLPKRTPVSDREIEAILVSKTVFLSGYSVNSYTWV*
BLAST of Cucsa.202080 vs. TrEMBL
Match: A0A0A0KJG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139480 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 2.8e-39 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1
BLAST of Cucsa.202080 vs. TrEMBL
Match: A0A061G2R7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015378 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.3e-16 Identity = 54/86 (62.79%), Postives = 61/86 (70.93%), Query Frame = 1
BLAST of Cucsa.202080 vs. TrEMBL
Match: A9PIH1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s01850g PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.6e-15 Identity = 45/76 (59.21%), Postives = 54/76 (71.05%), Query Frame = 1
BLAST of Cucsa.202080 vs. TrEMBL
Match: A0A0D2MWS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G111400 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.1e-15 Identity = 54/87 (62.07%), Postives = 59/87 (67.82%), Query Frame = 1
BLAST of Cucsa.202080 vs. TrEMBL
Match: V4S9A3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006352mg PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.1e-15 Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 1
BLAST of Cucsa.202080 vs. TAIR10
Match: AT5G24165.1 (AT5G24165.1 unknown protein) HSP 1 Score: 74.3 bits (181), Expect = 4.7e-14 Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 1
BLAST of Cucsa.202080 vs. TAIR10
Match: AT4G23885.1 (AT4G23885.1 unknown protein) HSP 1 Score: 58.5 bits (140), Expect = 2.7e-09 Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 1
BLAST of Cucsa.202080 vs. NCBI nr
Match: gi|700194693|gb|KGN49870.1| (hypothetical protein Csa_5G139480 [Cucumis sativus]) HSP 1 Score: 169.1 bits (427), Expect = 4.0e-39 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1
BLAST of Cucsa.202080 vs. NCBI nr
Match: gi|778698905|ref|XP_004145930.2| (PREDICTED: uncharacterized protein LOC101222729 [Cucumis sativus]) HSP 1 Score: 167.9 bits (424), Expect = 8.9e-39 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 1
BLAST of Cucsa.202080 vs. NCBI nr
Match: gi|659074412|ref|XP_008437590.1| (PREDICTED: uncharacterized protein LOC103482959 [Cucumis melo]) HSP 1 Score: 158.3 bits (399), Expect = 7.1e-36 Identity = 78/83 (93.98%), Postives = 79/83 (95.18%), Query Frame = 1
BLAST of Cucsa.202080 vs. NCBI nr
Match: gi|702289403|ref|XP_010047001.1| (PREDICTED: uncharacterized protein LOC104435975 [Eucalyptus grandis]) HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17 Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 1
BLAST of Cucsa.202080 vs. NCBI nr
Match: gi|1009122855|ref|XP_015878228.1| (PREDICTED: uncharacterized protein LOC107414599 [Ziziphus jujuba]) HSP 1 Score: 93.2 bits (230), Expect = 2.8e-16 Identity = 55/83 (66.27%), Postives = 61/83 (73.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |