Carg14019 (gene) Silver-seed gourd

Overview
NameCarg14019
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCoatomer subunit gamma-1
LocationCucurbita_argyrosperma_scaffold_097 : 383378 .. 388159 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACGTGTTTGGATAAAAAACCCAAATCCTTCACATGCTTTAACAGCGTCAGCGTTATTGCTATCACGCCAAACGCGGCCATAGAAGGCAAATTGGAAACTAAGAGAGTAAAGCAGAAGAAGAAAAATGGGCGTTGAAGGGCATCTTTTGAAGCGAATTCCTCGCATTAAATTCCCCGAAAGGCACCCGAAATCCTCAGCTTCAGGTATCTCTCTTTTTCTCACTCTTTAATTCCTTCGATTTTCTCCACTTTGTTCTTCTTTTTGTTTGAAAATTTCTTTGTAACATTGTTTGAATTTTTTGAATCTTGTGGATGAGTTCTTGGTACTCTCTGGTAGATTTCTTGTTTGTTTGGTTGCAGAGGATCGGAATTTCACTGGCTTTTTGTTCCTGTTTGAGAATTTATTTGTCTGTTTGATCGATCGTGTAGAAATTGGAACTCCTTTGGTTTAGAACTGACTCAATTGTTTTGTTCTTGTGGAAGATTTGTTGTCTGTTTAGCTGTATAGAAACAGAAACTCATTGGCTAGAAATTGGGTCAACTCTTCGGTTCCTGTGGAAATCTTTGTGCTCCCGCTGTTTGTTTGTGTAGAAACTTAGACTCATTGGATTAGAAACTGAGGCAAATTGCAAATACTTTCGATTATAGTTTAAAATTGAAAGTCGAGTCGGGCACCTTCGGTATGCCGTATCCTCTTTTTCGAGTTCCAAGAGATTGTGTGTGTATTATCCAAATGGCATATTTCCCACGATTCTTATTACCAGGTGTGGCTAATCGACTGTTTGCTGTGTAATACACATTGTTTATTACCCACAAAACCTTATAACCCACAAAGCTTATTACCCACCATTCTTATTACCAGGTATGGCTAATCGACTGTTTGCTGTGTAATACACATTGTTTATTACCCTCAATTTTGTATCTAAAATATATTTTTAAAAGTTATTGATACATTTAATATCTTTTAAAATTAACGAATCTATTAGACATAAAATTGTCTCATTGGATAATCATTTCCTTTTTGTTCAACAATTCATGTTTTTACCTTTCTTAAAGAATCTTTTGAATTCTTAGTCATCGACGTTTAGAAATTTATTAGAGATTTGTTAAAGTTTATTTGACACAAATTTAAAAATTCAATCTCTTATTAGAAATCTTATTAGAAAATTTGAAAGTTAAGAAACATTTCTTACTAAAGCTGTAATTTAACCCAAATTTTCCGTTTCTGTTTGGTTGTGTATGAACACAAGCACACTGGGTTTTGGAATTGGTGCAAGCTTGTTCAGAACCAGAAACTCACTGGGTGTTTAAGCTGAGTCAACAATTTCGTTTTCGTAAAAGAATACTCTCCTCTGTTGGGTGGTATTGAAATAAATCTAAGAAGCACAATTTTAGTTTTGGTACTATGTTCAATGCTGATGTTCTAACAGTTATTGGTCACATGTTGTATACTCGTTAGCTTAATGGACATATGCCAGGCGCTAATTGTGCGAAGTTAATATGAGTTCTACACATATCTAAGCATACAAATGCATGAACTTATTGATTTTGGATTCATACCCTTACTGTAATATGTGCCTAGTCTTTTAAGAATGACTGTATTTGTGTTTTTTCATATCCTGTCTCGATCCATATTTGTTGTTACAAAATTTGGGTGAGATTCAGTTTGGTTGATGGAAGTAATCTCTTCCTTTAAGTTATGTTATATGTTATTGGAAATCTTCATTACACTCTCCTGATTCCTTGCTGCGAGATCCTACATTGATTGGAGAGGGGAACGAAACATTCCTTATAAGAGTGTGGTAACCTCTCCCTAGTAGACGAATTTTAAAATCGTGAGGCTGATGGCGAATATAACGGGGCAAAGCAGACAATATCTACTAGTAGTGGAGTTGGCCTGTTACACTTTCCTTATGATTTCTAGTCTAGCTTGGGAAGGTTTGAAGTCAATTTAGAGGCCTTAGGCCGTGTTTGGTTTTTGGGTTCTTGTTTTTTGAAAATTGAATTTATTTTTATTTAGTTTTAAAAATTTGGCTTGTTTATTTAGTGCTTGCATTTGAATTAGTTTCAATCAGATTGCATTTGCATTTAACTCTATTGATAATGTTTGGTTAAGTTCATGTGTAAAACAAATTACAAATTCTTTCTCGAACCAAGTTCCAACTTATTTTGTTAGCCTGATGAATCTTACAATTTCTTCTTTGAGGATCACCTTTCCAGTCTCAACAGAGCCCTTCAACAGAAAACCTTGGTTACTATGCACTTTCGGGTTCCAACGTCCCAGCTCCGCTCCAAGACACGGCCGTGGGAGGAAAAGCGTCTCTCTTGCCAAAGCGTACGCCCGTCTCTGACAGAGAGATAGAGGCTATATTGGTAAGCAAAATTGTGAGATCTTATGTCGGTTGGAGATAGGAACAAAACATTCCTTATAAAGGTGTAGAAATCTCTCTCTAGTAGACGTGTTTAAAACTGTGAGATTGACGGCGATATGTAACGGGCCAAAGCAAACAATATCCACCAGCGATAGCAAATATTGTAAAAGTCCAAACCCACTGCAAGTAGATATTGTCCGCTTTGATCCGTTACGCATCACCGTCAGCCTCACGATTTTAAAACCTCTCTATTAGAGAGAGGTTTCCACACTTTTATAAATAATGTTTTATTCTCATCTCTAACCGACGTGTTAGAATTGTGAAATCAATCACAATTGAAAACAAACTTTAGTCTTCAACATGGACTGATGTTTGTTTTGATACACAAATCATTTGACCTTTTCAAACGGATGATTTTTCTAATCTCTCTATTTTTTGTCCATGTAGTTAGGTGGAACCTTTTGATCTTCTCCACCCGACGTCGGGAAAGCTCAGCGTTCAGCATGACCGATTCGATGTTAATCAATAATATTGGTGTAAACATTTGTTGCAAACTTTTGCATTTGCCTAGAATGTTATCAGAATCATTTTGATTTTGATTCTCTTCTTGTATGGAACTGTTAAACCCCCTGCCACCGGTCGAGGGGAGGAAGAAAACACATGCCCGTTGCTCAAAACTCCGAGCGTAGGTCTTCTCTTATGCTTTCCTTCTTATCTCCTCATCGAATTGTATAGGAGATTTCAAACGTATCAGTTCTCTAAACAGATATTTGAATCAAACAAGTGCAACTTGTCGTAGTATTAGAAAATTTTACTTAAAATATTAGAAAAATAGTTGATAAACATTCTGACAAATTGTTAAGTTTATAAATAATCAATATTTACAATTACTTTTAAAAAATAATAAAAACGTGTAAATTCATTATCTTTAAATTAAAATTCAGTAAAATTTGAAAATAGCATCCGTGGAAGAATTTGATTGGGCATTTTGACCAATTTTCTTGGCATCCAAACAGAAAATTTAATTTCTTTATGAGAATATTCCATCGTATTTATCCCTTTATTCTTTTGTTCTTCCATGAGGCGTTGGGAGGAGGAAATGAATCAACGGATGTGGTTCGTCAGATCAAAATCAACGGACGGGATTCATTAGATTCAATAACCTATGGAGAGGTATTTTATTGTCGAGATTAGTTGTAATGCATCCCAAAGAGCTGGACATTGAAGCAACCTCGGATGAAATGACAAACCGTAGATAAGAGTGTTCCTATGACTCGAAAACTAAACCAAATCAGAGTATCCAACCCAATCCAAAAAAAGTTAGGTTTGGTCGTATTTTATTTAGATTCAGTTGAATTTTTTGAAAATTAGAAAATTTGGGTTAGTTCGTGAATTGATATGTTTTTGGTTAGATCATCTCGACCCACTTAAAAATAGGGATGTGACTCAACTCAAACTATCTTACTTTTAAATTATTATGAACATTAATAATATTTTATATTTGTAACGATGTATTGTGACTTATGAAAGTTTGATATATAAGTTTCGTAAGATATTAGTTATTAATATAATACGTAAAGTAAATAATAATAATAATAAATAAATAAAAAACAACTAGGCAACCAATAAAAAAGATAGAGTTGAATTGGTTGAGTTGATAACTCTATTCAAGTTGCTCAGAGTCACTAATACAACCAATCTGAAATCCATCCAATCTTAGTTGGATCGCTTGTATTAGAATAAATTGATTAAAATCAAAGTAAAAAAAAAAAAATTTGGCTTGAGTTTTGTTTCAATTTAGTTTCGATAATTTTATCGCTCTAAACGTTTCAAAGTTTTTATGACACGAGGACTAAAAAATAATGTTAAATTATAAAGTTGAAATTTGTGTCCAGAACTATAAATGTATTTAAAATCTTACTAAAATATAATTTAATTTTTATTGGGCTTAACAATATGTTCAAGTGAAATTTGTCGAATTTATAATATTTAGAATGATTTTTGTAGTTCAAATTAATGGATATATTATTCAATAAACTATGGTCGAGTATTAAAAAAAAAAAAAAAAGTATAACTTGATAAATAAATATTACGAGATAAATAATAAATTACAATTTGTGATTGAATATTATTGAGGTCGTGTTTTGAAAAGTGTTGGGAGTTGCTTGCTTTGCTTTCTGGCGAAGTGATTAGATTGGGTGAGAGAAGAAAGAGAATCGACGGCTGAGGGTTGTTGAGATCAACGGTGGTCCGGTGACCGGCGATGGGTTTGTAACCGGCGAAGTGGGCAGGGGCATCAGCGATCCCCCAACTCCCAAGAAACCGTTTTCCTCTCTTCTTCGCCGCCGTCGCCCTATCTTCGGCCGGCACTTTAACTTCCCGGGGATCCCTTTAGCTCACTCGCTCTAG

mRNA sequence

AGACGTGTTTGGATAAAAAACCCAAATCCTTCACATGCTTTAACAGCGTCAGCGTTATTGCTATCACGCCAAACGCGGCCATAGAAGGCAAATTGGAAACTAAGAGAGTAAAGCAGAAGAAGAAAAATGGGCGTTGAAGGGCATCTTTTGAAGCGAATTCCTCGCATTAAATTCCCCGAAAGGCACCCGAAATCCTCAGCTTCAGAGGATCGGAATTTCACTGGCTTTTTGTTCCTGTTTGAGAATTTATTTGTCTGTTTGATCGATCGTGTAGAAATTGGAACTCCTTTGTCTCAACAGAGCCCTTCAACAGAAAACCTTGGTTACTATGCACTTTCGGGTTCCAACGTCCCAGCTCCGCTCCAAGACACGGCCGTGGGAGGAAAAGCGTCTCTCTTGCCAAAGCGTACGCCCGTCTCTGACAGAGAGATAGAGGCTATATTGGCGTTGGGAGGAGGAAATGAATCAACGGATGTGGTTCGTCAGATCAAAATCAACGGACGGGATTCATTAGATTCAATAACCTATGGAGAGAAGAAAGAGAATCGACGGCTGAGGGTTGTTGAGATCAACGGTGGTCCGGTGACCGGCGATGGGTTTGTAACCGGCGAAGTGGGCAGGGGCATCAGCGATCCCCCAACTCCCAAGAAACCGTTTTCCTCTCTTCTTCGCCGCCGTCGCCCTATCTTCGGCCGGCACTTTAACTTCCCGGGGATCCCTTTAGCTCACTCGCTCTAG

Coding sequence (CDS)

ATGGGCGTTGAAGGGCATCTTTTGAAGCGAATTCCTCGCATTAAATTCCCCGAAAGGCACCCGAAATCCTCAGCTTCAGAGGATCGGAATTTCACTGGCTTTTTGTTCCTGTTTGAGAATTTATTTGTCTGTTTGATCGATCGTGTAGAAATTGGAACTCCTTTGTCTCAACAGAGCCCTTCAACAGAAAACCTTGGTTACTATGCACTTTCGGGTTCCAACGTCCCAGCTCCGCTCCAAGACACGGCCGTGGGAGGAAAAGCGTCTCTCTTGCCAAAGCGTACGCCCGTCTCTGACAGAGAGATAGAGGCTATATTGGCGTTGGGAGGAGGAAATGAATCAACGGATGTGGTTCGTCAGATCAAAATCAACGGACGGGATTCATTAGATTCAATAACCTATGGAGAGAAGAAAGAGAATCGACGGCTGAGGGTTGTTGAGATCAACGGTGGTCCGGTGACCGGCGATGGGTTTGTAACCGGCGAAGTGGGCAGGGGCATCAGCGATCCCCCAACTCCCAAGAAACCGTTTTCCTCTCTTCTTCGCCGCCGTCGCCCTATCTTCGGCCGGCACTTTAACTTCCCGGGGATCCCTTTAGCTCACTCGCTCTAG

Protein sequence

MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSPSTENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILALGGGNESTDVVRQIKINGRDSLDSITYGEKKENRRLRVVEINGGPVTGDGFVTGEVGRGISDPPTPKKPFSSLLRRRRPIFGRHFNFPGIPLAHSL
Homology
[Close]
BLAST of Carg14019 vs. NCBI nr
Match: XP_022995845.1 (uncharacterized protein LOC111491252 [Cucurbita maxima])

HSP 1 Score: 141.4 bits (355), Expect = 3.5e-30
Identity = 79/110 (71.82%), Postives = 80/110 (72.73%), Query Frame = 0 

Query: 1   MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSP 60
           MGVEGHLLKRIPRIKFPERHPKSSAS                          +  SQQ P
Sbjct: 1   MGVEGHLLKRIPRIKFPERHPKSSASG------------------------SSSQSQQRP 60

Query: 61  STENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILALGG 111
           STENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAIL LGG
Sbjct: 61  STENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAIL-LGG 85

[Close]
BLAST of Carg14019 vs. NCBI nr
Match: XP_008437590.1 (PREDICTED: uncharacterized protein LOC103482959 [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 2.2e-24
Identity = 68/110 (61.82%), Postives = 76/110 (69.09%), Query Frame = 0 

Query: 1   MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSP 60
           MGVEGH+LKRIPRIKFP+RHPKSS                        +  G+ L  Q  
Sbjct: 1   MGVEGHVLKRIPRIKFPDRHPKSS------------------------LPSGSALQSQHN 60

Query: 61  STENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILALGG 111
           S +++GYYALSGSNVPAP Q+TAVGGKASLLPKRTPVSDREIEAIL LGG
Sbjct: 61  SDKDIGYYALSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAIL-LGG 85

[Close]
BLAST of Carg14019 vs. NCBI nr
Match: XP_022158039.1 (uncharacterized protein LOC111024619 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 2.9e-24
Identity = 72/111 (64.86%), Postives = 80/111 (72.07%), Query Frame = 0 

Query: 1   MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSP 60
           MGVEGH+LKRIPRIKFPERHPKSSAS      G  F                   +Q +P
Sbjct: 1   MGVEGHVLKRIPRIKFPERHPKSSAS------GSAF------------------QAQNNP 60

Query: 61  ST-ENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILALGG 111
           ST +++GYYALSGS+VPAP Q+TAVGGKASLLPKRTPVSDREIEAIL LGG
Sbjct: 61  STIKDIGYYALSGSDVPAPPQNTAVGGKASLLPKRTPVSDREIEAIL-LGG 86

[Close]
BLAST of Carg14019 vs. NCBI nr
Match: XP_004145930.2 (PREDICTED: uncharacterized protein LOC101222729 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 4.9e-24
Identity = 67/110 (60.91%), Postives = 75/110 (68.18%), Query Frame = 0 

Query: 1   MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSP 60
           MGVEGH+LKRIPRIKFP+RHPKSS+S                         G+ L  Q  
Sbjct: 1   MGVEGHVLKRIPRIKFPDRHPKSSSSS------------------------GSALQSQHN 60

Query: 61  STENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILALGG 111
             +++GYYALSGSNVPAP Q+ AVGGKASLLPKRTPVSDREIEAIL LGG
Sbjct: 61  PDKDIGYYALSGSNVPAPPQNMAVGGKASLLPKRTPVSDREIEAIL-LGG 85

[Close]
BLAST of Carg14019 vs. NCBI nr
Match: KGN49870.1 (hypothetical protein Csa_5G139480 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 1.4e-23
Identity = 64/106 (60.38%), Postives = 72/106 (67.92%), Query Frame = 0 

Query: 1   MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSP 60
           MGVEGH+LKRIPRIKFP+RHPKSS+S                         G+ L  Q  
Sbjct: 1   MGVEGHVLKRIPRIKFPDRHPKSSSSS------------------------GSALQSQHN 60

Query: 61  STENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAIL 107
             +++GYYALSGSNVPAP Q+ AVGGKASLLPKRTPVSDREIEAIL
Sbjct: 61  PDKDIGYYALSGSNVPAPPQNMAVGGKASLLPKRTPVSDREIEAIL 82

[Close]
BLAST of Carg14019 vs. TAIR10
Match: AT5G24165.1 (unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 6.4e-10
Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 0 

Query: 8   LKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSPSTENLGY 67
           ++RIPRIKFP+RH  SS S                         G      S   +N+  
Sbjct: 1   MRRIPRIKFPQRHSISSGS-------------------------GPAPGSVSGVKKNV-- 60

Query: 68  YALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILALGG 111
              + S+VPA  ++TA GGKASL PKRTPVSD+EIE+I+ LGG
Sbjct: 61  --TASSDVPAAPKNTADGGKASLQPKRTPVSDKEIESIM-LGG 73

[Close]
BLAST of Carg14019 vs. TAIR10
Match: AT4G23885.1 (unknown protein)

HSP 1 Score: 55.8 bits (133), Expect = 3.5e-08
Identity = 43/105 (40.95%), Postives = 52/105 (49.52%), Query Frame = 0 

Query: 6   HLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSPSTENL 65
           H LKRIPRIKFP+RH   SASE +                          SQ +   + L
Sbjct: 5   HGLKRIPRIKFPQRHINPSASEGK--------------------------SQVANEADTL 64

Query: 66  GYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILALGG 111
            +  L+       +Q T  GGKAS  PKRTPVS+ E+EAIL LGG
Sbjct: 65  FFSNLNN------IQKT-TGGKASSQPKRTPVSNEEMEAIL-LGG 75

[Close]
BLAST of Carg14019 vs. TrEMBL
Match: tr|A0A1S3AV04|A0A1S3AV04_CUCME (uncharacterized protein LOC103482959 OS=Cucumis melo OX=3656 GN=LOC103482959 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24
Identity = 68/110 (61.82%), Postives = 76/110 (69.09%), Query Frame = 0 

Query: 1   MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSP 60
           MGVEGH+LKRIPRIKFP+RHPKSS                        +  G+ L  Q  
Sbjct: 1   MGVEGHVLKRIPRIKFPDRHPKSS------------------------LPSGSALQSQHN 60

Query: 61  STENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILALGG 111
           S +++GYYALSGSNVPAP Q+TAVGGKASLLPKRTPVSDREIEAIL LGG
Sbjct: 61  SDKDIGYYALSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAIL-LGG 85

[Close]
BLAST of Carg14019 vs. TrEMBL
Match: tr|A0A0A0KJG5|A0A0A0KJG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139480 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 9.4e-24
Identity = 64/106 (60.38%), Postives = 72/106 (67.92%), Query Frame = 0 

Query: 1   MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSP 60
           MGVEGH+LKRIPRIKFP+RHPKSS+S                         G+ L  Q  
Sbjct: 1   MGVEGHVLKRIPRIKFPDRHPKSSSSS------------------------GSALQSQHN 60

Query: 61  STENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAIL 107
             +++GYYALSGSNVPAP Q+ AVGGKASLLPKRTPVSDREIEAIL
Sbjct: 61  PDKDIGYYALSGSNVPAPPQNMAVGGKASLLPKRTPVSDREIEAIL 82

[Close]
BLAST of Carg14019 vs. TrEMBL
Match: tr|A0A2P5DFN9|A0A2P5DFN9_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_069390 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.7e-15
Identity = 53/106 (50.00%), Postives = 63/106 (59.43%), Query Frame = 0 

Query: 1   MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSP 60
           MG EG +LKRIPRIKFPERHPK+S+S                         G+    Q  
Sbjct: 1   MGGEGQVLKRIPRIKFPERHPKTSSS-------------------------GSASQTQQA 60

Query: 61  STENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAIL 107
            +E+    +   S+VPAP Q+TAVGGKASL P+RTPVSDREIEAIL
Sbjct: 61  RSEDTRQKSTLTSDVPAPPQNTAVGGKASLQPRRTPVSDREIEAIL 81

[Close]
BLAST of Carg14019 vs. TrEMBL
Match: tr|A0A2N9J8X4|A0A2N9J8X4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60865 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.7e-15
Identity = 55/110 (50.00%), Postives = 65/110 (59.09%), Query Frame = 0 

Query: 1   MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQQSP 60
           MG E HLLKRIPRIKFP+RHP SS S                          T  +Q + 
Sbjct: 1   MGGEAHLLKRIPRIKFPQRHPTSSPSSG-----------------------STSQTQHTS 60

Query: 61  STENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAILALGG 111
           + ++     +SGS+VPA   +TAVGGKASL PKRTPVSD+EIEAIL LGG
Sbjct: 61  TKKDTHKITISGSDVPAGPINTAVGGKASLQPKRTPVSDKEIEAIL-LGG 86

[Close]
BLAST of Carg14019 vs. TrEMBL
Match: tr|A0A2P5FGC3|A0A2P5FGC3_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_072130 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.7e-14
Identity = 53/107 (49.53%), Postives = 64/107 (59.81%), Query Frame = 0 

Query: 1   MGVEGHLLKRIPRIKFPERHPKSSASEDRNFTGFLFLFENLFVCLIDRVEIGTPLSQ-QS 60
           MG +G +LKRIPRIKFPERH K+S+S                         G+  SQ Q 
Sbjct: 1   MGGQGQVLKRIPRIKFPERHSKASSS-------------------------GSSASQTQQ 60

Query: 61  PSTENLGYYALSGSNVPAPLQDTAVGGKASLLPKRTPVSDREIEAIL 107
             +E+    +   S+VPAP Q+TAVGGKASL P+RTPVSDREIEAIL
Sbjct: 61  ARSEDTRQKSTLTSDVPAPPQNTAVGGKASLQPRRTPVSDREIEAIL 82

The following BLAST results are available for this feature:
BLAST of Carg14019 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022995845.13.5e-3071.82uncharacterized protein LOC111491252 [Cucurbita maxima][more]
XP_008437590.12.2e-2461.82PREDICTED: uncharacterized protein LOC103482959 [Cucumis melo][more]
XP_022158039.12.9e-2464.86uncharacterized protein LOC111024619 [Momordica charantia][more]
XP_004145930.24.9e-2460.91PREDICTED: uncharacterized protein LOC101222729 [Cucumis sativus][more]
KGN49870.11.4e-2360.38hypothetical protein Csa_5G139480 [Cucumis sativus][more]
BLAST of Carg14019 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24165.16.4e-1041.75unknown protein[more]
AT4G23885.13.5e-0840.95unknown protein[more]
BLAST of Carg14019 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg14019 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AV04|A0A1S3AV04_CUCME1.4e-2461.82uncharacterized protein LOC103482959 OS=Cucumis melo OX=3656 GN=LOC103482959 PE=... [more]
tr|A0A0A0KJG5|A0A0A0KJG5_CUCSA9.4e-2460.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139480 PE=4 SV=1[more]
tr|A0A2P5DFN9|A0A2P5DFN9_PARAD2.7e-1550.00Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_069390 PE... [more]
tr|A0A2N9J8X4|A0A2N9J8X4_FAGSY4.7e-1550.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60865 PE=4 SV=1[more]
tr|A0A2P5FGC3|A0A2P5FGC3_9ROSA6.7e-1449.53Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_072130 PE=4 S... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14019-RACarg14019-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..178
NoneNo IPR availablePANTHERPTHR35751FAMILY NOT NAMEDcoord: 5..110

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg14019Csa5G139480Cucumber (Chinese Long) v2carcuB0536
Carg14019MELO3C005880Melon (DHL92) v3.5.1carmeB0508
Carg14019ClCG01G000480Watermelon (Charleston Gray)carwcgB0492
Carg14019CSPI05G03210Wild cucumber (PI 183967)carcpiB0543
Carg14019Cucsa.202080Cucumber (Gy14) v1carcgyB0583
Carg14019CmaCh02G011120Cucurbita maxima (Rimu)carcmaB0716
Carg14019CmoCh02G011400Cucurbita moschata (Rifu)carcmoB0694
Carg14019CsGy5G000490Cucumber (Gy14) v2carcgybB0513
Carg14019MELO3C005880.2Melon (DHL92) v3.6.1carmedB0514
Carg14019CsaV3_5G000560Cucumber (Chinese Long) v3carcucB0541
Carg14019Cla97C01G000520Watermelon (97103) v2carwmbB0529
Carg14019Bhi12G000554Wax gourdcarwgoB0615
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg14019Watermelon (97103) v2carwmbB0533
Carg14019Wax gourdcarwgoB0614
Carg14019Wax gourdcarwgoB0617
Carg14019Silver-seed gourdcarcarB329
Carg14019Silver-seed gourdcarcarB490
Carg14019Silver-seed gourdcarcarB494
Carg14019Cucurbita maxima (Rimu)carcmaB0712
Carg14019Cucurbita maxima (Rimu)carcmaB0713
Carg14019Cucurbita maxima (Rimu)carcmaB0714
Carg14019Cucurbita moschata (Rifu)carcmoB0691
Carg14019Cucurbita moschata (Rifu)carcmoB0692
Carg14019Cucurbita moschata (Rifu)carcmoB0693
Carg14019Cucurbita pepo (Zucchini)carcpeB0712
Carg14019Cucurbita pepo (Zucchini)carcpeB0713
Carg14019Cucurbita pepo (Zucchini)carcpeB0714
Carg14019Cucurbita pepo (Zucchini)carcpeB0718
Carg14019Bottle gourd (USVL1VR-Ls)carlsiB457
Carg14019Bottle gourd (USVL1VR-Ls)carlsiB460
Carg14019Melon (DHL92) v3.5.1carmeB0513
Carg14019Melon (DHL92) v3.6.1carmedB0519
Carg14019Watermelon (Charleston Gray)carwcgB0495
Carg14019Watermelon (97103) v1carwmB0503
Carg14019Watermelon (97103) v1carwmB0504