Cucsa.200070 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAACCCACTACCATTCGCTCCATCCCCCTTCCCTTCACGCTCTCATTTCGCATCTCCTCTTCCTCTTTGTCTTTCGTCTCCGCTTCTTCCATCGCGCCGGCCGGCCCTCTCCATCTATTTCTATTCGATCTCCTTTGCCTCGCCAGTCGCCACCTACCGTCGGTCACCATTTACAGTGAAGCCACAGACAAAACATAACTGGAAACACTCAAGACTCTACCCAACATCGATCCAAAATCAAACTGGCACAAGGCATGAACCTGAAGAAATGAAAAATTGAAAGATCATAGAAAACTTCAATTTTATGAATTTGAAGAGGAGAGGGGAAATACTCCAGCAGGCGTACGAGAGCTGACTACGAGGGCAGGCGGGAGGTTAGTACCCACGCACGATGCTGGAAGTTTGCAAAATTTTACTGAAATTAGGGCTGGGTACAGTCTTATTAAAGAAATTATGATGAAACGGATTAGGTTGGGATTTCATTTGGAGAGAATGAATGCTGAAGCCTTTTGGAGAGAATTGCATTATCAATTCAGTTGCATGTGTTGATTTGATTGATCCAATTTTGTTTGAATATTTATGTGGAAGTTTTTGTTAATTATACCTTCTGCCAATTTATGCCATCCTTATTGTGCTTAAAATTCATGCATCTTTGTTATGTGTAATGGATTTTGATTTCTTCAATCTAAATTTTTTAGATTGCCTTTTGAATTGGGAGACATGGAAGGAGTAGAGAGTATAACACCTGAGAAACAGAATAACACCATGGGATCGAGGAAGCGGTTGTCCTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTGTATGCAACTTTATTTTCAACTTTTTGATATTATTTTCATAATTTCATGTTACTTACCTTTTACTTTTGCAATGTGTCCCTCTAATCATTAGCAAATTTGATCTGCATCTTCTTGTTTATAGACAAGAATAATAAAATAGACCTAGCAAACGGGGAATCCCTTAGTTGTTTTGTTGGCGGATGTAGTATAGTACGATAATGTTTAAGCCAAGTCCATGAATGAAGTTGCTTGTCTTTTGGAACTATTATGGTTCTCCATGCTCTATCTTATCTACTAAAAACTGGCTCATCAATCTACTAAAATAGTTCTTTTTTTTGTTAGGCGAACAGTTACTTTACAGAGCTAATTTTATTATTTGCATGGTGTTTTTGCAACCACCCTTGGTTTTACGGTGTTCTTGCCCTTCTTTGGAGGCTTTTGGTTTTGAGGAATGATATGATTTTTTGGTGTTCAAGATTCTAACTAGGATAGTTTTTGGGATTTATTCATACTTTTTTGCTTCTACTGAGTCCTCTACTTTATTTATTTATTATTGTAACTACAGCCTACCTAACTCAGATTTACACCAGTTGAGCCTCTTTTTTGTTACCTGTTTGCGTCTGGAGACTGGAGACTGGAGATATCGTATCTCCTCTCTTTTTAGTTGATAAAATGGAAGTTAGTTTCTTACTAAAAACAAAGAATTATTTGCACACTAGTTCTGGATTTATTTCTTGGATTGTGATAGTTGGATTTTAAACTTACAATTTAATGATTTTTACTTTTAGCCTTTTGCCATTAGTTAGTTAATTGGAGAGTTTTTTTTTTTTTTTTAAGTTTACATATCAATTAAGGAAGAGGGTTAATGTCTTTTAACTTCTGAAATGTTTTTAGGTTCCTCATTTTTCCAACTAGTTCGAATGTCCCTTATTCTCCAAACCAGTTCAATTTCTTTTTTCATTGTTGTCAATTTTTTTTTAAAAAATTGGGTTATCGTTGCTGAAACTATCTGATACTCATATTCACACCTAATTTTTGCTATCGTAGACCTCCTTTTCCATATTGACGAGGTCATCTTTGGACCTAATTGTTAACTTGTAGATCTAATGGTTACATTTACTGGCAGCTCCGGTTCATCAGATGCAGCAATACTACAGGGTTGGAGTTTTTGATAACTGTTCTAACAAATGGACAGCTCTTGTTGACTGTTTAACTCTAAAGACGAAAAGAGCTTCTGAGGTTCAGGTATTTATCTAATACAAAAATACCTTGGGGGCCATATAGTTTATATATTTCAAGAATGCTGAAATCTTGCCGTTCTTCATTCTATGTTGCATTAAAAAAATTAAATAGCTCGGATCTGTGAATTGTAGGGGAGCTTTCAAATGACCAAAGCTTTTAGACTTTAGTAATTGGAGGGTCTATCAGCTCTCCTAGGAATTATTTTTTGGCCCTTGATATGATGATTTTTACCACATCGTTGTTAAGTTTTAATTAACAATATATAATAAACCAATTCGAGTAGGCGAAGGTCTCCCTCTGTGATGTACTAACCACAGCACAACTCACAAAAGCCTCCCCTAAAAATACACTAGAAGCCAACTAAATAACCAAACTAAAAAGGCAAAATAAACAGTAAACAAGTACAACACTTAAGTGGGGGGATTCTCATTTTTCTACCTCTACTAACATATGTATTAACAATTGAAGGCTTGACATGCTTTTGTCTATAATAATAAGTAAATGACAACAAAGATGTTGAGGTGGTTGTTTCTTTAGTTTCTGGGGATGGATTCTTAATGAGGAATAATAACCATTCATGTTTTACATACAAACCAATAGGAACTTCTTTTTCTTATTTTTTTTCACCTGAAAAGAAAAAGAAAGAAGAGAAAGAAAGAAGTACACACGGCATATATAGTTTGTTTTTAGATATAGGAAAACGAACTAAAATATTTACAAATATGGCAAAATATCACTTATAGTATTGATAGACACTATCATTTAAAACACTGATAGATGTCTAACAGAGCGAAATTTTGTTATATTTATAAGTATTTTAAGCAGTTATCGTTTACAAGAATGGACCATTTGGAAGTCCGTTAGCTAGCTTACACGGGGCCTTTTCTTTTCTTTTTTTTCCTTAAGAAAATGTACTTGGAATGCAGGAAATTCTTGAAAGCAGAGAAAAAGCAAAATCTCACATCTGGACTTTTCGAACCCCAGAAGAAGCATCATCACATTGGAAAGAACTCTTCGGACATTTAGAAGAAATAGAATGAAAATGATTCCGTCTTCTGTTTCGATCCTCATTTTGTAAGACTATTTTTTATATAAATTTTGATCTTGTTATTATTTTTATTATTATTATCTTTTAAAGTACATTTTGGTGGAGAAATGAGCCATCACGATGTGTTCATAGAATAAATAAGTTATGTTGTTTATCCAGAAGTTCAGAGAACTGTTTTGGTCAGAAAATCATTTCTTGCACATCTTCTAAATGTCCGAATATAATGAAAATGATTCTCC TAACCCACTACCATTCGCTCCATCCCCCTTCCCTTCACGCTCTCATTTCGCATCTCCTCTTCCTCTTTGTCTTTCGTCTCCGCTTCTTCCATCGCGCCGGCCGGCCCTCTCCATCTATTTCTATTCGATCTCCTTTGCCTCGCCAGTCGCCACCTACCGTCGGTCACCATTTACAGTGAAGCCACAGACAAAACATAACTGGAAACACTCAAGACTCTACCCAACATCGATCCAAAATCAAACTGGCACAAGGCATGAACCTGAAGAAATGAAAAATTGAAAGATCATAGAAAACTTCAATTTTATGAATTTGAAGAGGAGAGGGGAAATACTCCAGCAGGCGTACGAGAGCTGACTACGAGGGCAGGCGGGAGATTGCCTTTTGAATTGGGAGACATGGAAGGAGTAGAGAGTATAACACCTGAGAAACAGAATAACACCATGGGATCGAGGAAGCGGTTGTCCTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTCTCCGGTTCATCAGATGCAGCAATACTACAGGGTTGGAGTTTTTGATAACTGTTCTAACAAATGGACAGCTCTTGTTGACTGTTTAACTCTAAAGACGAAAAGAGCTTCTGAGGTTCAGGAAATTCTTGAAAGCAGAGAAAAAGCAAAATCTCACATCTGGACTTTTCGAACCCCAGAAGAAGCATCATCACATTGGAAAGAACTCTTCGGACATTTAGAAGAAATAGAATGAAAATGATTCCGTCTTCTGTTTCGATCCTCATTTTGTAAGACtattttttatataaattttgatcttgttattatttttattattattatcttttaaaGTACATTTTGGTGGAGAAATGAGCCATCACGATGTGTTCATAGAATAAATAAGTTATGTTGTTTATCCAGAAGTTCAGAGAACTGTTTTGGTCAGAAAATCATTTCTTGCACATCTTCTAAATGTCCGAATATAATGAAAATGATTCTCC ATGGAAGGAGTAGAGAGTATAACACCTGAGAAACAGAATAACACCATGGGATCGAGGAAGCGGTTGTCCTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTCTCCGGTTCATCAGATGCAGCAATACTACAGGGTTGGAGTTTTTGATAACTGTTCTAACAAATGGACAGCTCTTGTTGACTGTTTAACTCTAAAGACGAAAAGAGCTTCTGAGGTTCAGGAAATTCTTGAAAGCAGAGAAAAAGCAAAATCTCACATCTGGACTTTTCGAACCCCAGAAGAAGCATCATCACATTGGAAAGAACTCTTCGGACATTTAGAAGAAATAGAATGA MEGVESITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTALVDCLTLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHLEEIE*
BLAST of Cucsa.200070 vs. TrEMBL
Match: A0A0A0LSX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145950 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 3.2e-60 Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Cucsa.200070 vs. TrEMBL
Match: M5W0V1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013756mg PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 7.2e-44 Identity = 80/101 (79.21%), Postives = 93/101 (92.08%), Query Frame = 1
BLAST of Cucsa.200070 vs. TrEMBL
Match: A0A059AAJ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00418 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 5.1e-42 Identity = 79/94 (84.04%), Postives = 87/94 (92.55%), Query Frame = 1
BLAST of Cucsa.200070 vs. TrEMBL
Match: V4RSM0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029628mg PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 6.7e-42 Identity = 77/94 (81.91%), Postives = 89/94 (94.68%), Query Frame = 1
BLAST of Cucsa.200070 vs. TrEMBL
Match: U5GG41_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20070g PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 2.2e-40 Identity = 73/93 (78.49%), Postives = 87/93 (93.55%), Query Frame = 1
BLAST of Cucsa.200070 vs. TAIR10
Match: AT4G25315.1 (AT4G25315.1 Expressed protein) HSP 1 Score: 127.5 bits (319), Expect = 5.3e-30 Identity = 62/113 (54.87%), Postives = 75/113 (66.37%), Query Frame = 1
BLAST of Cucsa.200070 vs. NCBI nr
Match: gi|449443400|ref|XP_004139465.1| (PREDICTED: uncharacterized protein C227.17c [Cucumis sativus]) HSP 1 Score: 238.8 bits (608), Expect = 4.6e-60 Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Cucsa.200070 vs. NCBI nr
Match: gi|659071811|ref|XP_008462029.1| (PREDICTED: uncharacterized protein LOC103500495 [Cucumis melo]) HSP 1 Score: 224.9 bits (572), Expect = 6.9e-56 Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 1
BLAST of Cucsa.200070 vs. NCBI nr
Match: gi|595830968|ref|XP_007206173.1| (hypothetical protein PRUPE_ppa013756mg [Prunus persica]) HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43 Identity = 80/101 (79.21%), Postives = 93/101 (92.08%), Query Frame = 1
BLAST of Cucsa.200070 vs. NCBI nr
Match: gi|645217727|ref|XP_008227088.1| (PREDICTED: uncharacterized protein C227.17c [Prunus mume]) HSP 1 Score: 182.6 bits (462), Expect = 3.9e-43 Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 1
BLAST of Cucsa.200070 vs. NCBI nr
Match: gi|719973916|ref|XP_010243478.1| (PREDICTED: uncharacterized protein LOC104587525 [Nelumbo nucifera]) HSP 1 Score: 179.1 bits (453), Expect = 4.3e-42 Identity = 77/112 (68.75%), Postives = 94/112 (83.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|