CmoCh13G002870 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G002870
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DUF3128 family protein
Location	Cmo_Chr13 : 2411613 .. 2415198 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTAGTTTGTTTTGTGCCAATTCCAGAGAAGCATTCCGCTATCCTTCACTCCCTTCAACGCCTCTAATTTCACCAATACATCGAGATTACCCTATGAAACACCACTTTCTCACCTTTACCTCAGAAGAGTTGAGTCATTATCTCTTAATCATGCACCCGTTGGCGCCGCTGAATCTTTTGGAGCAGTCAATCATGCATCTATTTACTGATTTCGATTTGAATGTTCACTCTAGGTTTTTAGAAACATGCTAAAGAAATAAGTTCTAATTCTGATACTATGTGCTTTCTTTGAAATTCATTTAGATTTAAGGGAGCATCAGAAGGATTCAATTTGACAATCTTTAATAGTTTTTGTATTATCAATCCCGTTGCGATAGAAGTATGTTGATGGATCCATTTTTACATTGAATATCTAAGTAAAATTACTTCTCAATTACCGGTTCTGCCAAATTATACCATCCTTATTGTGCTTAAAATTCCTGCTTTTTTTAGATAGTTCATACTTTTCGAACCGGGAAACATGGAAGGCGTAGAGAAAATAACACCAGAGAAGCAGGATAACTCGATGGGATCGAGGCGGCGGTTGTCGTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTGTATGCATCCTTATAATCAACTCAATTATGTTATTTTCTTAGTTTTCTTTTCCCTAATCACTAGTATATTTGTGTTGTTTCCCATTAATTGGACTGAGGTTTTTAAAGTTCCATATCAATTGGGGAAGAGGATTTAAAGAAGTTTAATGTCTTTATAATATTTTACCCGAATCGTTTTTACCTTCTTTTTTCTTCCAAAAACTATTTTGCTCAGGATTAGGTTTAAATTTGCTCATCATTGTTGTAACTGTCTAATACTCATCTTTGCACCTAATTTTTGCTAATTGTTGACCTCTTTTTTTTCATATCGATGAGCTCATCATTGAACCAAATTGTTAACTTGTTAATCTACTGGTTATATTTACTGGCAGCTCCAGTTCATCAGATGCAGCAATACTACAGGCTTGGGTTTTTTGATAACTGTTCTGACAAATGGACATCTCTTATTGACTGTTTAAATCTCAAGACAAAACGAGCTTCCGAGGTTCAGGTACGTATCGGATACAAAAATACGCTCTGGTTTTATAATGTATATATTTCAAGAATGCTGAAATCTTGCTGTGGATCTTTATTTGGTTTTTTTTTTTCCATTAGCCCTGATATGTAAATATTAGGGGAGATTTCAATTGGACCAAAAGCTGTAAGACACAAATACCACTTCTAGCTTTTAGCTGTGTCTCCTCAAGTCCTTTTGGCTAGTCTACTAGAATTTTGTAGATAAGAAACTAACTTCCCATTAATGGAATGGATAGAACACAGAAAGGAGGAAGGATTCCAACTAGTAGAATACTCAAGTAATTTCCAAAAAACATTATCACACTTGTTTCTAGAAAAAAAAGTATGATGAAAAGGGATGCAACAAGAGGAGCTAAACTCTACAATACACACTCAAATTTCTGCCCGTCTCTAGCCTTTTCTCTAAAGCTTGTGGTTAACGGCATGCAGATCTTTTTTATTAGGGCATGAAACTGTTAGAATGCCTGTGACTTAAATGAACAAAGCCCAAACCAATCGATGAAGTTCTCGGTATTAGAATTTAGTTAAGTTACTAATTTAGGCCCTACAATTGGGTTTCTATTCGATCAATAAACTTTAAAAAGTGTTGAATAAGTCCTTGAACTTTCAGTTTTATGTTTATTTGGTCCATAAACTTTAAAAAAGGGTTGAATAAGTTCTTGAACTTTCAATTTTACGTTTATTTGCTCCATAAACTTTAAAACGTGTTTAAACCTTTTATTTTGTGCCTCGTAAGTCCAAAAACTTTCAATTTTATGTCTAATAAGCCTTGATGTATTCGATGTTTTTTAAAATTCACGAAATTATTGGATATAAAGTTGAAAGTTTATGGTTCTATTAGACTTAAACTTTAATCTTATATCTATTAGGTCAATAATTTTTAAAAACTTTGAACTTATCTTCAAAGATCACACAAACTTAATAGTTTATGGACTTATTAACACTTTTTCAAATCGGCAATCTTTAAGACACAAGCTTGAAAGCTCAAGAACTATACTTGTCATTTAACCTAGAATTTTTTGTTTATCTCATGCTTCATAGTATTAATATTTTTGTACATTATGCACTTCATTTATTTGAAGCCTACAACTTTTTGTAACTGATGCTTAGGCTTTAGAAGAGGGCAATTGCAGCCCAACATGGCTCATATTTGGAAAATTTCTAAGCCTCTTACCTCATCTCAACTCTATGGAATTTAAACATGCCAAATAACAGTGAATTTTATTTTTCTTTGGTCCTGATCGTAAAATAAGTGATTTTTACAATATTGAGAGTAATCCTAAGTTTCATCGTTTATTCTACTTCTTAGGAAACATTCTGGAATTTTTCACATGTTTTATTTCCAACATCAGTTCTCCTATGAATTCTTTTGCAGCCCTTGTTTTGGCCTTCTAATATACTCCCAGTTTCTTATAATAATAAGAAGAATAATAAAGATGTTGAGGCGGCTGTTTCTTAGTTTCTGAAGATGGACTCTTGATGAGGAATTGGTAACTATTCATCTTTTATTCAAACTAATATGAGCTTTTTTAGTGTACTTCTGTAATAGCCTAAACCCACCGCTAGCAGATATGGTCTGCTTTGACTGGTTACGTATTGCCGTCAGTTTCACGGTTTTAAAACGCGTCTACTAGGGGAGAGGTTTTCCACACCCTATAAGGAATGCTTCGTTCCACCCTCTAATCGATATGGGATCTCACAACATCAGACATTAAAGAAAAAGAAGAAATAATTATTTTTCTCGTTTTTTTTTTTTTCTTTTGGTAATCTCGTCCGATGACTGCAGGTTTGAATACCTTGTTTTTTCTCTATCTGTTTTTACTTTTTGGTTATTCAAATGTCATCTCAAAGAAAAACAAAAACCCTGTTGCTAAATACTTGTTTTGAGTAAGATCAATGCACAATTTGGTAGCTTGTTACCTTGAACCGAGTCTTGTTTTTTAGGGTCTCTCCACAATCAGATATTACTTTTATGGTTACTTAAGAAGTAATAAGATTAAGTTAAATGCAGGAAATCCTCGAAAGCCGAGAGAAAGCCAAATCTCACATCTGGACGTTTCGAACCCCAGCAGAAGCATCGTCGCATTGGAAAGAACTGTTCGGAGATTTAGATGAAATGGAATGAACAATGATTTCTATTTCCCCCCTTGAATTTCCTAGGACTAATACCCTTCTCTTGCACGGTTGGCCTTCCTCATCCGACTAGTTTGGCTAGAAAAATTGTTATTACTAAGAGAAATTATTCGATGCAGCTATCACGACAATGAAGACGTAGCTATTACACTCGAGAATAAGATATGTCTATTCATAAATTTAGGACAGTTTTGGTCTTTTTATAATCCTTGATCTTAAAGTGATTGTATTTGACTCATTTTAGTTGATTGAGAATGTTCCTATCTTTGTATTTGCCACTATTTTCATTTATACTGTTTGCACTTTGACC

mRNA sequence

GTGTAGTTTGTTTTGTGCCAATTCCAGAGAAGCATTCCGCTATCCTTCACTCCCTTCAACGCCTCTAATTTCACCAATACATCGAGATTACCCTATGAAACACCACTTTCTCACCTTTACCTCAGAAGAATAGTTCATACTTTTCGAACCGGGAAACATGGAAGGCGTAGAGAAAATAACACCAGAGAAGCAGGATAACTCGATGGGATCGAGGCGGCGGTTGTCGTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTCTCCAGTTCATCAGATGCAGCAATACTACAGGCTTGGGTTTTTTGATAACTGTTCTGACAAATGGACATCTCTTATTGACTGTTTAAATCTCAAGACAAAACGAGCTTCCGAGGTTCAGGAAATCCTCGAAAGCCGAGAGAAAGCCAAATCTCACATCTGGACGTTTCGAACCCCAGCAGAAGCATCGTCGCATTGGAAAGAACTGTTCGGAGATTTAGATGAAATGGAATGAACAATGATTTCTATTTCCCCCCTTGAATTTCCTAGGACTAATACCCTTCTCTTGCACGGTTGGCCTTCCTCATCCGACTAGTTTGGCTAGAAAAATTGTTATTACTAAGAGAAATTATTCGATGCAGCTATCACGACAATGAAGACGTAGCTATTACACTCGAGAATAAGATATGTCTATTCATAAATTTAGGACAGTTTTGGTCTTTTTATAATCCTTGATCTTAAAGTGATTGTATTTGACTCATTTTAGTTGATTGAGAATGTTCCTATCTTTGTATTTGCCACTATTTTCATTTATACTGTTTGCACTTTGACC

Coding sequence (CDS)

ATGGAAGGCGTAGAGAAAATAACACCAGAGAAGCAGGATAACTCGATGGGATCGAGGCGGCGGTTGTCGTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTCTCCAGTTCATCAGATGCAGCAATACTACAGGCTTGGGTTTTTTGATAACTGTTCTGACAAATGGACATCTCTTATTGACTGTTTAAATCTCAAGACAAAACGAGCTTCCGAGGTTCAGGAAATCCTCGAAAGCCGAGAGAAAGCCAAATCTCACATCTGGACGTTTCGAACCCCAGCAGAAGCATCGTCGCATTGGAAAGAACTGTTCGGAGATTTAGATGAAATGGAATGA

Homology

[Close]

BLAST of CmoCh13G002870 vs. TrEMBL
Match: A0A0A0LSX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145950 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.7e-53
Identity = 97/112 (86.61%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 1   MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60
           MEGVE ITPEKQ+N++GSR+RLSCTTCFDALWFCYSPVHQMQQYYR+G FDNCS+KWT+L
Sbjct: 1   MEGVESITPEKQNNTLGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60

Query: 61  IDCLNLKTKRASEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 113
           +DCL LKTKRASEVQEILESREKAKSHIWTFRTP EASSHWKELFG L+E+E
Sbjct: 61  VDCLTLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHLEEIE 112

[Close]

BLAST of CmoCh13G002870 vs. TrEMBL
Match: M5W0V1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013756mg PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.4e-44
Identity = 82/101 (81.19%), Postives = 91/101 (90.10%), Query Frame = 1


Query: 12  QDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSLIDCLNLKTKRA 71
           ++ S+  +RRLSC+TCFDALWFCYSPVHQMQQYYRLG  DNCS KWTSL+DCL+LKTKR+
Sbjct: 5   EEGSLAPKRRLSCSTCFDALWFCYSPVHQMQQYYRLGVLDNCSGKWTSLVDCLSLKTKRS 64

Query: 72  SEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 113
           SEVQEILE+REKAKSHIWTFRTP EAS HWKE FG LDEME
Sbjct: 65  SEVQEILETREKAKSHIWTFRTPEEASVHWKEQFGHLDEME 105

[Close]

BLAST of CmoCh13G002870 vs. TrEMBL
Match: V4RSM0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029628mg PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.1e-40
Identity = 76/98 (77.55%), Postives = 86/98 (87.76%), Query Frame = 1


Query: 15  SMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSLIDCLNLKTKRASEV 74
           S   RRRLSC+TCFDALWFCYSPVHQMQQYYRLG  DNC+ KW++L+DCL LKTK +S+V
Sbjct: 11  SSAPRRRLSCSTCFDALWFCYSPVHQMQQYYRLGVLDNCTAKWSALVDCLTLKTKPSSQV 70

Query: 75  QEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 113
           +EILE+REKAK HIWTFRTP EA+SHWK LFG LDEME
Sbjct: 71  EEILETREKAKPHIWTFRTPEEANSHWKNLFGHLDEME 108

[Close]

BLAST of CmoCh13G002870 vs. TrEMBL
Match: A0A059AAJ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00418 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.1e-40
Identity = 78/101 (77.23%), Postives = 87/101 (86.14%), Query Frame = 1


Query: 12  QDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSLIDCLNLKTKRA 71
           ++ S   RRRLSCTTCF++LWFCYSPVHQMQQYYRLG  DNCS KW++L+DCL LKTKRA
Sbjct: 6   EEASSVPRRRLSCTTCFNSLWFCYSPVHQMQQYYRLGVLDNCSGKWSALVDCLALKTKRA 65

Query: 72  SEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 113
           S+VQEILE+REKAK HIWT RTP EASSHWKELF  LDE E
Sbjct: 66  SDVQEILETREKAKHHIWTIRTPEEASSHWKELFAHLDEPE 106

[Close]

BLAST of CmoCh13G002870 vs. TrEMBL
Match: U5GG41_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20070g PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.8e-39
Identity = 73/96 (76.04%), Postives = 84/96 (87.50%), Query Frame = 1


Query: 15  SMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSLIDCLNLKTKRASEV 74
           S  ++RRLSCTTCFDALWFCYSPVHQMQQYYRLG FDNCS KW+ L+DCL LKTKR+S+V
Sbjct: 14  SSTAKRRLSCTTCFDALWFCYSPVHQMQQYYRLGLFDNCSQKWSDLVDCLTLKTKRSSQV 73

Query: 75  QEILESREKAKSHIWTFRTPAEASSHWKELFGDLDE 111
           QEILE+REKAK H+W  RTP EAS HW++LFG LD+
Sbjct: 74  QEILEAREKAKPHLWKLRTPEEASVHWRQLFGHLDD 109

[Close]

BLAST of CmoCh13G002870 vs. TAIR10
Match: AT4G25315.1 (AT4G25315.1 Expressed protein)

HSP 1 Score: 123.2 bits (308), Expect = 9.8e-29
Identity = 60/121 (49.59%), Postives = 77/121 (63.64%), Query Frame = 1


Query: 11  KQDNSMGSRRRLSCTTCFDALWFCY-------------------SPVHQMQQYYRLGFFD 70
           + ++S   RRR+SCT CFDALWFCY                   +P +QMQQYYR+G  D
Sbjct: 4   ENEDSSSVRRRVSCTKCFDALWFCYWMSRWSNITSNGDDTGNDLAPFYQMQQYYRVGKLD 63

Query: 71  NCSDKWTSLIDCLNLKTKRASEVQEILESREK--AKSHIWTFRTPAEASSHWKELFGDLD 111
           +C+ K++ L DCL+LKTKRASE + ILE +EK  A+ HIW  RT  EA SHW E FG L+
Sbjct: 64  DCTKKFSDLFDCLSLKTKRASEAERILEEQEKAAAEKHIWIMRTQEEAVSHWNETFGHLE 123

[Close]

BLAST of CmoCh13G002870 vs. NCBI nr
Match: gi|449443400|ref|XP_004139465.1| (PREDICTED: uncharacterized protein C227.17c [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 2.4e-53
Identity = 97/112 (86.61%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 1   MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60
           MEGVE ITPEKQ+N++GSR+RLSCTTCFDALWFCYSPVHQMQQYYR+G FDNCS+KWT+L
Sbjct: 1   MEGVESITPEKQNNTLGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60

Query: 61  IDCLNLKTKRASEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 113
           +DCL LKTKRASEVQEILESREKAKSHIWTFRTP EASSHWKELFG L+E+E
Sbjct: 61  VDCLTLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHLEEIE 112

[Close]

BLAST of CmoCh13G002870 vs. NCBI nr
Match: gi|659071811|ref|XP_008462029.1| (PREDICTED: uncharacterized protein LOC103500495 [Cucumis melo])

HSP 1 Score: 215.3 bits (547), Expect = 5.4e-53
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1


Query: 1   MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60
           MEGVE IT EKQ+NSMG +RRLSCTTCFDALWFCYSPVHQMQQYYR+G FDNCS KWT+L
Sbjct: 1   MEGVENITTEKQNNSMGPKRRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSSKWTAL 60

Query: 61  IDCLNLKTKRASEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 113
           +DCLNLKTKRASEVQEILESREKAKSHIWTFRTP EASSHWKELFG L+E+E
Sbjct: 61  LDCLNLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHLEEIE 112

[Close]

BLAST of CmoCh13G002870 vs. NCBI nr
Match: gi|595830968|ref|XP_007206173.1| (hypothetical protein PRUPE_ppa013756mg [Prunus persica])

HSP 1 Score: 184.9 bits (468), Expect = 7.8e-44
Identity = 82/101 (81.19%), Postives = 91/101 (90.10%), Query Frame = 1


Query: 12  QDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSLIDCLNLKTKRA 71
           ++ S+  +RRLSC+TCFDALWFCYSPVHQMQQYYRLG  DNCS KWTSL+DCL+LKTKR+
Sbjct: 5   EEGSLAPKRRLSCSTCFDALWFCYSPVHQMQQYYRLGVLDNCSGKWTSLVDCLSLKTKRS 64

Query: 72  SEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 113
           SEVQEILE+REKAKSHIWTFRTP EAS HWKE FG LDEME
Sbjct: 65  SEVQEILETREKAKSHIWTFRTPEEASVHWKEQFGHLDEME 105

[Close]

BLAST of CmoCh13G002870 vs. NCBI nr
Match: gi|645217727|ref|XP_008227088.1| (PREDICTED: uncharacterized protein C227.17c [Prunus mume])

HSP 1 Score: 183.0 bits (463), Expect = 3.0e-43
Identity = 81/104 (77.88%), Postives = 90/104 (86.54%), Query Frame = 1


Query: 9   PEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSLIDCLNLKT 68
           P  ++ S+  +RRLSC+TCFDALWFCYSPVHQMQQYYRLG  DNCS KW SL+DCL+LKT
Sbjct: 2   PSVEEGSLAPKRRLSCSTCFDALWFCYSPVHQMQQYYRLGVLDNCSGKWNSLVDCLSLKT 61

Query: 69  KRASEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 113
           KR+SEVQEILE+REKAK HIWTFRTP EAS HWKE FG LDEME
Sbjct: 62  KRSSEVQEILETREKAKPHIWTFRTPEEASVHWKEQFGHLDEME 105

[Close]

BLAST of CmoCh13G002870 vs. NCBI nr
Match: gi|802621997|ref|XP_012076184.1| (PREDICTED: uncharacterized protein LOC105637352 [Jatropha curcas])

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-41
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 1


Query: 10  EKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSLIDCLNLKTK 69
           EK+  S  +RR+LSCTT FDALWFCYSPVHQMQQYYRLG FDNCS+KW +L+DCL LKTK
Sbjct: 4   EKESTSF-ARRQLSCTTSFDALWFCYSPVHQMQQYYRLGVFDNCSEKWNALVDCLLLKTK 63

Query: 70  RASEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 113
           ++SEVQEIL SREKAK HIWTFRTP EASSHWKEL+G LD ME
Sbjct: 64  KSSEVQEILASREKAKDHIWTFRTPEEASSHWKELYGQLDGME 105

The following BLAST results are available for this feature:

BLAST of CmoCh13G002870 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh13G002870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSX6_CUCSA	1.7e-53	86.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145950 PE=4 SV=1	[more]
M5W0V1_PRUPE	5.4e-44	81.19	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013756mg PE=4 SV=1	[more]
V4RSM0_9ROSI	2.1e-40	77.55	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029628mg PE=4 SV=1	[more]
A0A059AAJ3_EUCGR	2.1e-40	77.23	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00418 PE=4 SV=1	[more]
U5GG41_POPTR	1.8e-39	76.04	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s20070g PE=4 SV=1	[more]

BLAST of CmoCh13G002870 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25315.1	9.8e-29	49.59	Expressed protein	[more]

BLAST of CmoCh13G002870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443400\|ref\|XP_004139465.1\|	2.4e-53	86.61	PREDICTED: uncharacterized protein C227.17c [Cucumis sativus]	[more]
gi\|659071811\|ref\|XP_008462029.1\|	5.4e-53	87.50	PREDICTED: uncharacterized protein LOC103500495 [Cucumis melo]	[more]
gi\|595830968\|ref\|XP_007206173.1\|	7.8e-44	81.19	hypothetical protein PRUPE_ppa013756mg [Prunus persica]	[more]
gi\|645217727\|ref\|XP_008227088.1\|	3.0e-43	77.88	PREDICTED: uncharacterized protein C227.17c [Prunus mume]	[more]
gi\|802621997\|ref\|XP_012076184.1\|	2.8e-41	78.64	PREDICTED: uncharacterized protein LOC105637352 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021475	DUF3128

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G002870.1	CmoCh13G002870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021475	Protein of unknown function DUF3128	PFAM	PF11326	DUF3128	coord: 21..92 score: 1.4
None	No IPR available	PANTHER	PTHR28052	FAMILY NOT NAMED	coord: 7..112 score: 4.1
None	No IPR available	PANTHER	PTHR28052:SF1	UPF0545 PROTEIN C22ORF39	coord: 7..112 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G002870	Cucsa.200070	Cucumber (Gy14) v1	cgycmoB0594
CmoCh13G002870	CmaCh13G002780	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G002870	Cla001692	Watermelon (97103) v1	cmowmB185
CmoCh13G002870	Csa1G145950	Cucumber (Chinese Long) v2	cmocuB188
CmoCh13G002870	MELO3C004803	Melon (DHL92) v3.5.1	cmomeB181
CmoCh13G002870	ClCG01G012780	Watermelon (Charleston Gray)	cmowcgB179
CmoCh13G002870	CSPI01G14310	Wild cucumber (PI 183967)	cmocpiB192
CmoCh13G002870	Lsi03G000840	Bottle gourd (USVL1VR-Ls)	cmolsiB203
CmoCh13G002870	Cp4.1LG20g07440	Cucurbita pepo (Zucchini)	cmocpeB203
CmoCh13G002870	MELO3C004803.2	Melon (DHL92) v3.6.1	cmomedB203
CmoCh13G002870	CsaV3_1G014480	Cucumber (Chinese Long) v3	cmocucB0221
CmoCh13G002870	Cla97C01G011890	Watermelon (97103) v2	cmowmbB198
CmoCh13G002870	CsGy1G014240	Cucumber (Gy14) v2	cgybcmoB057
CmoCh13G002870	Carg23686	Silver-seed gourd	carcmoB0234

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G002870	Watermelon (97103) v1	cmowmB191
CmoCh13G002870	Wax gourd	cmowgoB0259
CmoCh13G002870	Cucurbita moschata (Rifu)	cmocmoB135
CmoCh13G002870	Cucurbita maxima (Rimu)	cmacmoB179