Cucsa.197600 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGCCCAAAATCCTAAATTTGACCTTCTTGATGCCCTCTCCGATTCCGATTTTCACCCCCCGATTCAACCTTTTCCTACCCAGTTCCCTTCTTCGTTTTCGTCTCCACATCGTTCCGATTGCTGACTGAAACTCTTGTCCACCCACCAGAAGGGAAGAATCAGCTACAAAAAGGAGAAGGGTCATACCTTCGAAGCCAATCGAGAAACGACATTCAAGAGTTACGGAAACGTATTTTCATGCCAGCTTCCGCCAATTAATCAAACCCCTCTGGTATTAACGATCCTCAAGTTCTTTATGATTCCGATGCACAAATTTCCTTATAGTTTCGCACATTCAGTTCTATTCAATTTCGTTGTCAATTACTTTGGTGATCAGCTTCTGGGTATGTCTCCTTTCGCTGAAATTTTTGTTTTTGTTTTTTTTTGGCAGAATTGTAAAGTGGGTTTGGAGTGAGGATGGTGTTGGTGTTGGCTTTGGGGGACTTACATATACCACATAGAGCTCCTGACCTTCCCGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATCCAGCATATCATTTGCACCGGAAATCTTTGTATCAAAGTATGTTCAAATCATTTTTCCAGCTACTTCTGTTGTCGTACTTGGTGTCATAAATTGTTATGCTTTTTGATATCTATGGTTGTGCATCTTGAAGAGAATTTAGAGTCTGAATTAGTAATCTCTACTACAGCTGCCAAAGTTCAAAATATTAGAATGGAAATGGTATCAAATGTCCATGGAAGTCTCCAGTCCTCCTTCCCTGTCATCTAATTGTAGTTGAGATTGATTGATATATTTAGATCATCTTCTTTCACTATAAACTTATGAGTAAGATATAAAAGTACTCCAATCTAAAAGAACAATACCAAGTACATAGTAAGACATAAATGTTCTTGCAGTCTTGTCTTTTAGCCATTTTGATTGATGATCTTCGTATCCAACTTTCAAACACTTGTAATCAATGGAAACATCATTAGGCTATGTCCTGAATTAGTAAATATACTATTGATTTGCATGAGTTGTTGAGTTACATTGTGAATTATGAACCTGGGAAACATGCATGCTTCTTATAGGGTAACATGTTCGATCCGTGGTTGTTGAACTCAAACTTCGTATGTCATCTGTCATATCCTAACATTGAATTTTCCTCATAGCATTAGTCTTACTGATCTTTTTCTTAGCTTGTGCTGTATATTTTTCTTAGATTGATATATAATTCATCCAAGAGATTCTGCTGGTAACATCTTTGTACCATTGAATTTTTTCAAGAAGTGAGATGCAGTGAACTGCGCAAGTATCTTAGTATTCTGTTGTGCCAAATGTAACAACATTTTGAACTTGAACGGCAATAAACTAAATATCTCCATTGTGTGACTGGACCTTTGGTTATTTTCGTTTTAAATGGAAATTTTATAACATTCAACAATGTACTTTGTTAATACTTCCTTGTGCTTCAACTTCAAATGTTAAGCTTAGTGATAACTGACGGAAGAACTTAGATGTTATTAAAAAGAAAACTATAGATTCAAAATTCTTTTCAAGGAAAACTTGCTTGCATATGATATATCAGGACTTAATCAATCACGTTGGACTGTGCATTCACTTCTATTTGGATCTCTGTTCATCATATATGCTTTTGGGGCTTTGAACATTATGTTAAGCACCAACTTGCATGTAATGTTGTCTAATTGGTCGTACAAGTGGTTGAGTTTTTTTGTTCAATTGGTTCATATCTCCTTGGTATAAATATTGGTGTGATGGTTCAAAGTTTACTGGTAATGTTTCCAGGAAGTTCATGACTACTTGAAAACTATTTGTCCGGATTTGCACATTACACGAGGTGAATATGATGAAGAGACTCGCTATCCCGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGTGCCATGGGCATCAGGTATTGTTTGTTGCACTTTTTTCATCTTGATCACATTTGTTTTTCAAGTTGTCCAATTCTCCCAGATTATTCCTTATCAAGTGTACAACGTGTCATAGTTTTCATCATTGTGAGGGATCATTAGAAATGGTTTCAGATACACAATGCTCTACTATTAAGGGGTTGACTAAAGTTTCCTGTTTTTTTCCTTCCGTATCTTGAATCATGAACTTAAGTTCCTGAATGTCATACCTTCTGATTTTTCGTCTGTAGTAACCATGAACAGAAAATTGTACTTCAAGTTTTCAACTAAGCTAACAAAACTTCTGTGCTACCAAAAGTTAACATTAGCAAATAAGTTGTGTAAACATTGTATAATTTTGCCAACTTTCTGTGGGAGCAAACTTCGTGTCCATGAATTTTATTTGTTGTTGTCTGGCTAGGTTATTCCTTGGGGAGACCTAGACTCACTCGCCATGATGCAGAGGCAGCTAGATGTAGACATCCTTGTCACTGGTCACACCCATCAATTTACAGCTTACAAACACGAGGGAGGTGTGGTGATTAACCCCGGATCTGCAACAGGTGCATATAGCAGCATCACCTATGATGTCAACCCAAGCTTTGTCCTTATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATTGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAAACAACCACAACTGCTCATTGACTCGAACAAATTGGCCTTTTTACGAACATAATGAAGTTAATTTCTTTTATGGAGTTGTTGTTGTGATGCATGTTAAACAATGCTTAATCTTGCTGAAAAAGATGCTGTTGTTTCTGTGGTGATTGATCCCAGAGAAGAGTTCTTGTGACTTTGTTTATTCGATATTTGATGAGGTTGTGCACAGAAACCCTTGGTTGTTCTTGTTGGCACCTTGCCTCAATTTCTTTAGTATCCAAATACCCATCTATCGAAATTGAAGATTATGACAAGTACTAGAG TTGCCCAAAATCCTAAATTTGACCTTCTTGATGCCCTCTCCGATTCCGATTTTCACCCCCCGATTCAACCTTTTCCTACCCAGTTCCCTTCTTCGTTTTCGTCTCCACATCGTTCCGATTGCTGACTGAAACTCTTGTCCACCCACCAGAAGGGAAGAATCAGCTACAAAAAGGAGAAGGGTCATACCTTCGAAGCCAATCGAGAAACGACATTCAAGAGTTACGGAAACGTATTTTCATGCCAGCTTCCGCCAATTAATCAAACCCCTCTGAATTGTAAAGTGGGTTTGGAGTGAGGATGGTGTTGGTGTTGGCTTTGGGGGACTTACATATACCACATAGAGCTCCTGACCTTCCCGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATCCAGCATATCATTTGCACCGGAAATCTTTGTATCAAAGAAGTTCATGACTACTTGAAAACTATTTGTCCGGATTTGCACATTACACGAGGTGAATATGATGAAGAGACTCGCTATCCCGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGTGCCATGGGCATCAGGTTATTCCTTGGGGAGACCTAGACTCACTCGCCATGATGCAGAGGCAGCTAGATGTAGACATCCTTGTCACTGGTCACACCCATCAATTTACAGCTTACAAACACGAGGGAGGTGTGGTGATTAACCCCGGATCTGCAACAGGTGCATATAGCAGCATCACCTATGATGTCAACCCAAGCTTTGTCCTTATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATTGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAAACAACCACAACTGCTCATTGACTCGAACAAATTGGCCTTTTTACGAACATAATGAAGTTAATTTCTTTTATGGAGTTGTTGTTGTGATGCATGTTAAACAATGCTTAATCTTGCTGAAAAAGATGCTGTTGTTTCTGTGGTGATTGATCCCAGAGAAGAGTTCTTGTGACTTTGTTTATTCGATATTTGATGAGGTTGTGCACAGAAACCCTTGGTTGTTCTTGTTGGCACCTTGCCTCAATTTCTTTAGTATCCAAATACCCATCTATCGAAATTGAAGATTATGACAAGTACTAGAG ATGGTGTTGGTGTTGGCTTTGGGGGACTTACATATACCACATAGAGCTCCTGACCTTCCCGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATCCAGCATATCATTTGCACCGGAAATCTTTGTATCAAAGAAGTTCATGACTACTTGAAAACTATTTGTCCGGATTTGCACATTACACGAGGTGAATATGATGAAGAGACTCGCTATCCCGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGTGCCATGGGCATCAGGTTATTCCTTGGGGAGACCTAGACTCACTCGCCATGATGCAGAGGCAGCTAGATGTAGACATCCTTGTCACTGGTCACACCCATCAATTTACAGCTTACAAACACGAGGGAGGTGTGGTGATTAACCCCGGATCTGCAACAGGTGCATATAGCAGCATCACCTATGATGTCAACCCAAGCTTTGTCCTTATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATTGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAAACAACCACAACTGCTCATTGA MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKTTTTAH*
BLAST of Cucsa.197600 vs. Swiss-Prot
Match: VPS29_ARATH (Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana GN=VPS29 PE=2 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.0e-96 Identity = 168/187 (89.84%), Postives = 175/187 (93.58%), Query Frame = 1
BLAST of Cucsa.197600 vs. Swiss-Prot
Match: VPS29_DANRE (Vacuolar protein sorting-associated protein 29 OS=Danio rerio GN=vps29 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 9.1e-69 Identity = 118/182 (64.84%), Postives = 149/182 (81.87%), Query Frame = 1
BLAST of Cucsa.197600 vs. Swiss-Prot
Match: VPS29_MOUSE (Vacuolar protein sorting-associated protein 29 OS=Mus musculus GN=Vps29 PE=1 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 1.5e-68 Identity = 117/182 (64.29%), Postives = 148/182 (81.32%), Query Frame = 1
BLAST of Cucsa.197600 vs. Swiss-Prot
Match: VPS29_PONAB (Vacuolar protein sorting-associated protein 29 OS=Pongo abelii GN=VPS29 PE=2 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 1.5e-68 Identity = 117/182 (64.29%), Postives = 148/182 (81.32%), Query Frame = 1
BLAST of Cucsa.197600 vs. Swiss-Prot
Match: VPS29_RAT (Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus GN=Vps29 PE=1 SV=2) HSP 1 Score: 260.4 bits (664), Expect = 1.5e-68 Identity = 117/182 (64.29%), Postives = 148/182 (81.32%), Query Frame = 1
BLAST of Cucsa.197600 vs. TrEMBL
Match: A0A0A0LP31_CUCSA (Vacuolar protein sorting-associated protein 29 OS=Cucumis sativus GN=Csa_1G009640 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 8.4e-106 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
BLAST of Cucsa.197600 vs. TrEMBL
Match: A0A059A516_EUCGR (Vacuolar protein sorting-associated protein 29 OS=Eucalyptus grandis GN=EUGRSUZ_K02462 PE=3 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 5.1e-103 Identity = 182/186 (97.85%), Postives = 185/186 (99.46%), Query Frame = 1
BLAST of Cucsa.197600 vs. TrEMBL
Match: A0A067K8B8_JATCU (Vacuolar protein sorting-associated protein 29 OS=Jatropha curcas GN=JCGZ_11604 PE=3 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 8.7e-103 Identity = 182/188 (96.81%), Postives = 185/188 (98.40%), Query Frame = 1
BLAST of Cucsa.197600 vs. TrEMBL
Match: A0A151U1M7_CAJCA (Vacuolar protein sorting-associated protein 29 OS=Cajanus cajan GN=KK1_005774 PE=3 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 3.3e-102 Identity = 180/186 (96.77%), Postives = 185/186 (99.46%), Query Frame = 1
BLAST of Cucsa.197600 vs. TrEMBL
Match: A0A0S3RKA3_PHAAN (Vacuolar protein sorting-associated protein 29 OS=Vigna angularis var. angularis GN=Vigan.03G063500 PE=3 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 4.3e-102 Identity = 179/186 (96.24%), Postives = 185/186 (99.46%), Query Frame = 1
BLAST of Cucsa.197600 vs. TAIR10
Match: AT3G47810.2 (AT3G47810.2 Calcineurin-like metallo-phosphoesterase superfamily protein) HSP 1 Score: 354.0 bits (907), Expect = 5.8e-98 Identity = 168/187 (89.84%), Postives = 175/187 (93.58%), Query Frame = 1
BLAST of Cucsa.197600 vs. NCBI nr
Match: gi|449440770|ref|XP_004138157.1| (PREDICTED: vacuolar protein sorting-associated protein 29 [Cucumis sativus]) HSP 1 Score: 391.0 bits (1003), Expect = 1.2e-105 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
BLAST of Cucsa.197600 vs. NCBI nr
Match: gi|702496112|ref|XP_010037159.1| (PREDICTED: vacuolar protein sorting-associated protein 29 [Eucalyptus grandis]) HSP 1 Score: 381.7 bits (979), Expect = 7.3e-103 Identity = 182/186 (97.85%), Postives = 185/186 (99.46%), Query Frame = 1
BLAST of Cucsa.197600 vs. NCBI nr
Match: gi|1009132708|ref|XP_015883517.1| (PREDICTED: vacuolar protein sorting-associated protein 29 [Ziziphus jujuba]) HSP 1 Score: 381.7 bits (979), Expect = 7.3e-103 Identity = 182/186 (97.85%), Postives = 185/186 (99.46%), Query Frame = 1
BLAST of Cucsa.197600 vs. NCBI nr
Match: gi|802652927|ref|XP_012080235.1| (PREDICTED: vacuolar protein sorting-associated protein 29 [Jatropha curcas]) HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102 Identity = 182/188 (96.81%), Postives = 185/188 (98.40%), Query Frame = 1
BLAST of Cucsa.197600 vs. NCBI nr
Match: gi|1012361978|gb|KYP73161.1| (Vacuolar protein sorting-associated protein 29 [Cajanus cajan]) HSP 1 Score: 379.0 bits (972), Expect = 4.8e-102 Identity = 180/186 (96.77%), Postives = 185/186 (99.46%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |