Cucsa.192370 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.192370
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionGypsy/ty3 element polyprotein
Locationscaffold01333 : 226184 .. 227179 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAGGACATTTTGGTAGGGACATTTACGAACAGTTTGGATCCCATAATTAGAACAGAGGTTTTCGTGATGTGGGCCATGGGCCTGGAAGATATGATGGATGCAGCCCGGTTAGCTGAGGAAAAATTAGAAATGGCTCGGGCTTCTCAAGGCCCATATGCAAAAGATGGAAAACCAGCACAGAAACAAGGGGGAAATTTTTTtAGAAAACCCTACAACAAAAATCGTGACATTAGTTGAGAGGGTACCCACGCATTCATCTACTCCGATCACCTCGCAAGTTGTCGCATTTGGCAATGGGGTTCGGCGCGAAAATAATTTTCGAAGATGGACCGATTATGAGTTACAAGCAAGGCGTGACAAGGGACTTTGCTATCGGTGTGACAAACTGTTTGGTAAGGGACACCGCTGCAAAAACAAaGAGCTCCGCCTTTACTTGGTAGCGGTGATTTAGAGGATACAAAGATGGAAGACGTCGAGAACGAGAACGCAATGGTTGAAGTTAGTTCGGTTGTGGAATTATCCTTGAATTCGGTGGTGGGATTGACAGCTCCGGGTACGTTCAAGGTTAAAGGAACAATGGAAGATAGAGAGATAATAATCATGGTAGATTGTGGAGCAACCCACAATTTTATCTCACTCAAGCTGGTAGACGAATTGAAATTACCTATGACCGAAACGACCAACTACGACATCATTATGGGATCTAGGAAGGCAGTGCAAGGTCGAGGGATGTGCAAAGACATCACGGTAGGGCAACTTAGATATGGTACTGGGGATGCAGTGGCTCCGAAAGCAAGGTGCTACGACTGTCGATTGGAAAGCTTTAACCATGACATTCATTGTCGGGGACACTAATGTAATCTTGAAAGGAGATCCTTCACTGACCAGAGTGGAAATATCTTTGAAGGTGCTGGTTAAAATGTGGCAATCAGATGATCAAGAATTTTTAGTTGATTTCAGAGCTATGGGAATTTCCAAGACCAATAGGAT

mRNA sequence

atggccgaggacattttggtagggacatttacgaacagtttggatcccataattagaacagaggttttcgtgatgtgggccatgggcctggaagatatgatggatgcagcccggttagctgaggaaaaattagaaatggctcgggcttctcaaggcccatatgcaaaagatggaaaaccagcacagaaacaagggggaaatttttttagaaaaccctacaacaaaaatcgtgacattaggacaccgctgcaaaaacaaagagctccgcctttacttggtagcggtgatttagaggatacaaagatggaagacgtcgagaacgagaacgcaatggttgaagttagttcggttgtggaattatccttgaattcggtggtgggattgacagctccgggtacgttcaaggttaaaggaacaatggaagatagagagataataatcatggtagattgtggagcaacccacaattttatctcactcaagctggtagacgaattgAAATTACCTATGACCGAAACGACCAACTACGACATCATTATGGGATCTAGGAAGGCAGTGCAAGGTCGAGGGATGTGCAAAGACATCACGtggctccgaaagcaaggtgctacgactgtcgattggaaagctttaaccatgacattcattgtcggggacactaatgtaatcttgaaaggagatccttcactgaccagagtggaaatatctttgaaggtgctggttaaaatgtggcaaTCAGATGATCAAGAATTTTTAGTTGATTTCAGAGCTATGGGAATTTCCAAGACCAATAGGAT

Coding sequence (CDS)

ATGGCCGAGGACATTTTGGTAGGGACATTTACGAACAGTTTGGATCCCATAATTAGAACAGAGGTTTTCGTGATGTGGGCCATGGGCCTGGAAGATATGATGGATGCAGCCCGGTTAGCTGAGGAAAAATTAGAAATGGCTCGGGCTTCTCAAGGCCCATATGCAAAAGATGGAAAACCAGCACAGAAACAAGGGGGAAATTTTTTtAGAAAACCCTACAACAAAAATCGTGACATTAGGACACCGCTGCAAAAACAAaGAGCTCCGCCTTTACTTGGTAGCGGTGATTTAGAGGATACAAAGATGGAAGACGTCGAGAACGAGAACGCAATGGTTGAAGTTAGTTCGGTTGTGGAATTATCCTTGAATTCGGTGGTGGGATTGACAGCTCCGGGTACGTTCAAGGTTAAAGGAACAATGGAAGATAGAGAGATAATAATCATGGTAGATTGTGGAGCAACCCACAATTTTATCTCACTCAAGCTGGTAGACGAATTGAAATTACCTATGACCGAAACGACCAACTACGACATCATTATGGGATCTAGGAAGGCAGTGCAAGGTCGAGGGATGTGCAAAGACATCACGTGGCTCCGAAAGCAAGGTGCTACGACTGTCGATTGGAAAGCTTTAACCATGACATTCATTGTCGGGGACACTAATGTAATCTTGAAAGGAGATCCTTCACTGACCAGAGTGGAAATATCTTTGAAGGTGCTGGTTAAAATGTGGCAATCAGATGATCAAGAATTTTTAGTTGATTTCAGAGCTATGGGAATTTCCAAGACCAATAGGAT

Protein sequence

MAEDILVGTFTNSLDPIIRTEVFVMWAMGLEDMMDAARLAEEKLEMARASQGPYAKDGKPAQKQGGNFFRKPYNKNRDIRTPLQKQRAPPLLGSGDLEDTKMEDVENENAMVEVSSVVELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHNFISLKLVDELKLPMTETTNYDIIMGSRKAVQGRGMCKDITWLRKQGATTVDWKALTMTFIVGDTNVILKGDPSLTRVEISLKVLVKMWQSDDQEFLVDFRAMGISKTNRX
Homology
[Close]
BLAST of Cucsa.192370 vs. TrEMBL
Match: E5GC35_CUCME (Gypsy/ty3 element polyprotein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-63
Identity = 148/270 (54.81%), Postives = 167/270 (61.85%), Query Frame = 1 

Query: 1   MAEDILVGTFTNSLDPIIRTEVFVMWAMGLEDMMDAARLAEEKLEMARASQGPYAKDGKP 60
           MAED+LVGTFT  LDP+IRTEVF M  +GLEDM+D ARLAEEKLE+ARAS  PYAKDGKP
Sbjct: 207 MAEDVLVGTFTKGLDPVIRTEVFAMRVVGLEDMVDVARLAEEKLEIARASHSPYAKDGKP 266

Query: 61  AQ------------KQGGNFFRKPYNKNRDIRTPLQKQRAPPLLGS-----------GDL 120
           AQ            K      R P + N+        Q     +G             +L
Sbjct: 267 AQKHAPKNSEIPSTKIVTLAERIPTSLNQ----ASNPQNGATGMGGRILNCKHDVKRDEL 326

Query: 121 EDTKMEDVENENAMVEVSSVVELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHNF 180
           ED +M D  +E  MVEVS +VELSLN VVGLTAPGTFK+KG +EDREI+IMVDCGATHNF
Sbjct: 327 EDVEMVDSTHEGEMVEVSPMVELSLNFVVGLTAPGTFKIKGRVEDREIVIMVDCGATHNF 386

Query: 181 ISLKLVDELKLPMTETTNYDIIMGSRKAVQGRGMCKDIT--------------------- 221
           ISLKLV+ L LPM   TNY +IMGS KAVQGR MCK IT                     
Sbjct: 387 ISLKLVESLNLPMAAITNYGVIMGSEKAVQGREMCKGITVGLPVITIVEDFLPLELGNLD 446

[Close]
BLAST of Cucsa.192370 vs. TrEMBL
Match: E5GC18_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 106/221 (47.96%), Postives = 143/221 (64.71%), Query Frame = 1 

Query: 61  AQKQGGNFFR--KPYNKNRDIRTPLQKQRAPPLLGSGDLEDTKMEDVENENAMVEVSSVV 120
           A+K+ G  +R  KP++K    +    K      + + DL DT+M + +N+  MVE+  +V
Sbjct: 299 ARKEKGLCYRCDKPFSKGHRCKNRELKL----CVVADDLIDTEMSEEDNDGGMVEIGPIV 358

Query: 121 ELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHNFISLKLVDELKLPMTETTNYDI 180
           ELSL+SVVGLTAPGT K+KG +EDRE+++M+DCGATHNFISL+LV+E+++  TETT Y +
Sbjct: 359 ELSLSSVVGLTAPGTSKIKGKVEDREVVVMIDCGATHNFISLRLVEEMQIATTETTQYGV 418

Query: 181 IMGSRKAVQGRGMCKDIT---------------------------WLRKQGATTVDWKAL 240
           IMGS KAVQG+GMC  +                            WL KQGA TVDW+ L
Sbjct: 419 IMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLDMVLGMQWLPKQGAMTVDWRNL 478

Query: 241 TMTFIVGDTNVILKGDPSLTRVEISLKVLVKMWQSDDQEFL 253
            MTF V D  V+L+GD SLTR+ ISLK+L+K WQ +D+ FL
Sbjct: 479 AMTFAVRDVKVMLRGDLSLTRMAISLKMLMKQWQPEDRGFL 515

[Close]
BLAST of Cucsa.192370 vs. TrEMBL
Match: E5GC18_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.6e-09
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 1 

Query: 1   MAEDILVGTFTNSLDPIIRTEVFVMWAMGLEDMMDAARLAEEKLEMARASQGPYAKDGKP 60
           MAE++L GTFTN LDP IR EVF M  +GLED+M+AA+LAEEK E+ +    PY    + 
Sbjct: 179 MAEEVLEGTFTNGLDPRIRKEVFAMRVVGLEDLMEAAQLAEEKAEVTKGGPYPYPYSKEA 238

Query: 61  AQKQGGN 68
           A+   G+
Sbjct: 239 AKTNLGS 245


HSP 2 Score: 137.9 bits (346), Expect = 1.8e-29
Identity = 70/162 (43.21%), Postives = 100/162 (61.73%), Query Frame = 1 

Query: 108 ENAMVEVSSVVELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHNFISLKLVDELK 167
           E A++E+  VVELSLNSVVGLT PGT K+KGT+  +E+II+VD GATHNF+SL+LV +L 
Sbjct: 25  EPALIELKDVVELSLNSVVGLTTPGTMKIKGTIRSKEVIILVDSGATHNFLSLELVQQLA 84

Query: 168 LPMTETTNYDIIMGSRKAVQGRGMCKDI---------------------------TWLRK 227
           LP+T  T+Y ++MG   +++G+G+C+ +                            WL  
Sbjct: 85  LPLTTITSYGVMMGIGISMKGKGICRGVCISMQGLTVVEDFLPLELGNTDVILGMPWLGT 144

Query: 228 QGATTVDWKALTMTFIVGDTNVILKGDPSLTRVEISLKVLVK 243
            G   V+WK LTM   +G   ++LK DPSL+R E+SLK + +
Sbjct: 145 LGDVKVNWKMLTMKIKMGKAVIVLKRDPSLSRTEVSLKAMAR 186

[Close]
BLAST of Cucsa.192370 vs. TrEMBL
Match: A5B2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-29
Identity = 72/167 (43.11%), Postives = 102/167 (61.08%), Query Frame = 1 

Query: 98   EDTKMED-VENENAMVEVSSVVELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHN 157
            +D + +D    E A++E+   VELSLNSVVGLT PGT K+KGT+  +E+II+VD GATHN
Sbjct: 1022 DDNQFDDRATEEPALIELKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHN 1081

Query: 158  FISLKLVDELKLPMTETTNYDIIMGSRKAVQGRGMCKDI--------------------- 217
            F+SL+LV +L LP+T TT+Y ++MG+  +V+G+G+C+ +                     
Sbjct: 1082 FLSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNT 1141

Query: 218  ------TWLRKQGATTVDWKALTMTFIVGDTNVILKGDPSLTRVEIS 237
                   WL   G   V+WK LTM   +G   ++LKGDPSL+R E S
Sbjct: 1142 DVILGMPWLGTLGDVKVNWKMLTMKIKMGKAVMVLKGDPSLSRTETS 1188

[Close]
BLAST of Cucsa.192370 vs. TrEMBL
Match: A0A087GH17_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G098300 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.7e-25
Identity = 69/180 (38.33%), Postives = 97/180 (53.89%), Query Frame = 1 

Query: 103 EDVENENAMVEVSSVVELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHNFISLKL 162
           E+ ENE     V+ V ELSLNS+VG+++P T K++GT+    I++M+D GA+HNFIS K+
Sbjct: 135 EEEENEEVNRRVTKVAELSLNSMVGISSPRTVKLRGTIRGESIVVMIDSGASHNFISEKV 194

Query: 163 VDELKLPMTETTNYDIIMGSRKAVQGRGMCKD---------------------------I 222
           V  L L  T+TT Y ++ G    VQGRG+CKD                           I
Sbjct: 195 VTRLGLTATDTTGYGVLTGGGITVQGRGVCKDVELCLQDLVIVAPFLPLELGSADAILGI 254

Query: 223 TWLRKQGATTVDWKALTMTFIVGDTNVILKGDPSLTRVEISLKVLVKMWQSDDQEFLVDF 256
            WL   G    +WK   + F+VG+  V L+GDPSL    IS+K L K    + Q  +++F
Sbjct: 255 QWLASLGDMKCNWKLQKLAFMVGEKEVELRGDPSLCCSPISMKGLWKALDREGQGVIIEF 314

[Close]
BLAST of Cucsa.192370 vs. TAIR10
Match: AT3G29750.1 (AT3G29750.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-07
Identity = 38/128 (29.69%), Postives = 63/128 (49.22%), Query Frame = 1 

Query: 125 VVGLTAPGTFKVKGTMEDREIIIMVDCGATHNFISLKLVDELKLPMTETTNYDIIMGSRK 184
           V+ LT     +  G + D ++++ +D GAT NFI ++L   LKLP + T    +++G R+
Sbjct: 115 VIDLTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQ 174

Query: 185 AVQGRGMCKDI-TWLRKQGATTVDWKALTMTFIVGDTNVILKGDPSLTRVEISLKVLVKM 244
            +Q  G C  I  W+++   T      L +     D +VIL G   L++    L   +  
Sbjct: 175 CIQSVGTCLGIRLWVQEVEITE---NFLLLDLAKTDVDVIL-GYEWLSK----LGETMVN 234

Query: 245 WQSDDQEF 252
           WQ+ D  F
Sbjct: 235 WQNQDFSF 234

[Close]
BLAST of Cucsa.192370 vs. TAIR10
Match: AT3G30770.1 (AT3G30770.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 52.4 bits (124), Expect = 5.1e-07
Identity = 32/119 (26.89%), Postives = 60/119 (50.42%), Query Frame = 1 

Query: 106 ENENAMVEVSSVVELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHNFISLKLVDE 165
           E E  + +  ++ ++   S    T     +  G +   ++++++D GAT+NFIS +L   
Sbjct: 256 EWEGLLEDFKTIRQVKRQSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALV 315

Query: 166 LKLPMTETTNYDIIMGSRKAVQGRGMCKDITWLRKQGATTVDWKALTMTFIVGDTNVIL 225
           LKLP + T    +++G R+ +Q  G C  I  L ++     ++  L +T    D +VIL
Sbjct: 316 LKLPTSTTNQASVLLGQRQCIQTIGTCFGINLLVQEVEINENFLLLDLT--KTDVDVIL 372

[Close]
BLAST of Cucsa.192370 vs. NCBI nr
Match: gi|307136196|gb|ADN34034.1| (gypsy/ty3 element polyprotein [Cucumis melo subsp. melo])

HSP 1 Score: 251.1 bits (640), Expect = 2.1e-63
Identity = 148/270 (54.81%), Postives = 167/270 (61.85%), Query Frame = 1 

Query: 1   MAEDILVGTFTNSLDPIIRTEVFVMWAMGLEDMMDAARLAEEKLEMARASQGPYAKDGKP 60
           MAED+LVGTFT  LDP+IRTEVF M  +GLEDM+D ARLAEEKLE+ARAS  PYAKDGKP
Sbjct: 207 MAEDVLVGTFTKGLDPVIRTEVFAMRVVGLEDMVDVARLAEEKLEIARASHSPYAKDGKP 266

Query: 61  AQ------------KQGGNFFRKPYNKNRDIRTPLQKQRAPPLLGS-----------GDL 120
           AQ            K      R P + N+        Q     +G             +L
Sbjct: 267 AQKHAPKNSEIPSTKIVTLAERIPTSLNQ----ASNPQNGATGMGGRILNCKHDVKRDEL 326

Query: 121 EDTKMEDVENENAMVEVSSVVELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHNF 180
           ED +M D  +E  MVEVS +VELSLN VVGLTAPGTFK+KG +EDREI+IMVDCGATHNF
Sbjct: 327 EDVEMVDSTHEGEMVEVSPMVELSLNFVVGLTAPGTFKIKGRVEDREIVIMVDCGATHNF 386

Query: 181 ISLKLVDELKLPMTETTNYDIIMGSRKAVQGRGMCKDIT--------------------- 221
           ISLKLV+ L LPM   TNY +IMGS KAVQGR MCK IT                     
Sbjct: 387 ISLKLVESLNLPMAAITNYGVIMGSEKAVQGREMCKGITVGLPVITIVEDFLPLELGNLD 446

[Close]
BLAST of Cucsa.192370 vs. NCBI nr
Match: gi|307136175|gb|ADN34016.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 106/221 (47.96%), Postives = 143/221 (64.71%), Query Frame = 1 

Query: 61  AQKQGGNFFR--KPYNKNRDIRTPLQKQRAPPLLGSGDLEDTKMEDVENENAMVEVSSVV 120
           A+K+ G  +R  KP++K    +    K      + + DL DT+M + +N+  MVE+  +V
Sbjct: 299 ARKEKGLCYRCDKPFSKGHRCKNRELKL----CVVADDLIDTEMSEEDNDGGMVEIGPIV 358

Query: 121 ELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHNFISLKLVDELKLPMTETTNYDI 180
           ELSL+SVVGLTAPGT K+KG +EDRE+++M+DCGATHNFISL+LV+E+++  TETT Y +
Sbjct: 359 ELSLSSVVGLTAPGTSKIKGKVEDREVVVMIDCGATHNFISLRLVEEMQIATTETTQYGV 418

Query: 181 IMGSRKAVQGRGMCKDIT---------------------------WLRKQGATTVDWKAL 240
           IMGS KAVQG+GMC  +                            WL KQGA TVDW+ L
Sbjct: 419 IMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLDMVLGMQWLPKQGAMTVDWRNL 478

Query: 241 TMTFIVGDTNVILKGDPSLTRVEISLKVLVKMWQSDDQEFL 253
            MTF V D  V+L+GD SLTR+ ISLK+L+K WQ +D+ FL
Sbjct: 479 AMTFAVRDVKVMLRGDLSLTRMAISLKMLMKQWQPEDRGFL 515

[Close]
BLAST of Cucsa.192370 vs. NCBI nr
Match: gi|307136175|gb|ADN34016.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 70.1 bits (170), Expect = 6.7e-09
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 1 

Query: 1   MAEDILVGTFTNSLDPIIRTEVFVMWAMGLEDMMDAARLAEEKLEMARASQGPYAKDGKP 60
           MAE++L GTFTN LDP IR EVF M  +GLED+M+AA+LAEEK E+ +    PY    + 
Sbjct: 179 MAEEVLEGTFTNGLDPRIRKEVFAMRVVGLEDLMEAAQLAEEKAEVTKGGPYPYPYSKEA 238

Query: 61  AQKQGGN 68
           A+   G+
Sbjct: 239 AKTNLGS 245


HSP 2 Score: 161.0 bits (406), Expect = 2.9e-36
Identity = 92/233 (39.48%), Postives = 135/233 (57.94%), Query Frame = 1 

Query: 61  AQKQGGNFFRKPYNKNRDIRTPLQKQRAPPLL----GSGDLEDTKMEDVENENAMVE--- 120
           A+K+ G  FR     + D +  L++QR   +     G  + E  + E  E E   +E   
Sbjct: 350 ARKEKGLCFRCNEKYSADHKCRLKEQRELRMFVVTEGREEYEIVEEEKEEKELGRIEVNE 409

Query: 121 -VSSVVELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHNFISLKLVDELKLPMTE 180
            +++VVELS+NSVVGL  PGT KV+G +   E+II++DCGATHNF+S KLV +L LP+ E
Sbjct: 410 DITTVVELSINSVVGLNDPGTMKVRGKLLGEEVIILIDCGATHNFVSEKLVKKLILPIKE 469

Query: 181 TTNYDIIMGSRKAVQGRGMCKDI---------------------------TWLRKQGATT 240
           T++Y +I+GS  AVQG+G+C+ +                            WL   G TT
Sbjct: 470 TSHYGVILGSGAAVQGKGICEKLEVQLNGWKIVEDFLPIELGGVDVILGMQWLYSLGVTT 529

Query: 241 VDWKALTMTFIVGDTNVILKGDPSLTRVEISLKVLVKMWQSDDQEFLVDFRAM 259
           VDWK L+++F+     V +KGDPSLTR  ISLK ++K W+ +D  FL++ R++
Sbjct: 530 VDWKNLSLSFVAEGKEVNIKGDPSLTRARISLKNMMKNWEENDSGFLIECRSL 582

[Close]
BLAST of Cucsa.192370 vs. NCBI nr
Match: gi|147854459|emb|CAN78588.1| (hypothetical protein VITISV_043911 [Vitis vinifera])

HSP 1 Score: 137.5 bits (345), Expect = 3.4e-29
Identity = 72/167 (43.11%), Postives = 102/167 (61.08%), Query Frame = 1 

Query: 98   EDTKMED-VENENAMVEVSSVVELSLNSVVGLTAPGTFKVKGTMEDREIIIMVDCGATHN 157
            +D + +D    E A++E+   VELSLNSVVGLT PGT K+KGT+  +E+II+VD GATHN
Sbjct: 1022 DDNQFDDRATEEPALIELKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHN 1081

Query: 158  FISLKLVDELKLPMTETTNYDIIMGSRKAVQGRGMCKDI--------------------- 217
            F+SL+LV +L LP+T TT+Y ++MG+  +V+G+G+C+ +                     
Sbjct: 1082 FLSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNT 1141

Query: 218  ------TWLRKQGATTVDWKALTMTFIVGDTNVILKGDPSLTRVEIS 237
                   WL   G   V+WK LTM   +G   ++LKGDPSL+R E S
Sbjct: 1142 DVILGMPWLGTLGDVKVNWKMLTMKIKMGKAVMVLKGDPSLSRTETS 1188

[Close]
BLAST of Cucsa.192370 vs. NCBI nr
Match: gi|731338584|ref|XP_010680400.1| (PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 126.3 bits (316), Expect = 7.8e-26
Identity = 75/203 (36.95%), Postives = 113/203 (55.67%), Query Frame = 1 

Query: 84  QKQRAPPLLGSGDLEDTKMEDVENE--NAMVEVSS---VVELSLNSVVGLTAPGTFKVKG 143
           QK+    L+  G+ ED   E+ E E  +A  +VS+    VELSLNSVVGLT+P T K+ G
Sbjct: 379 QKKEVSVLVMEGE-EDPPPEEEEEEVNDASADVSAEVTTVELSLNSVVGLTSPRTMKLTG 438

Query: 144 TMEDREIIIMVDCGATHNFISLKLVDELKLPMTETTNYDIIMGSRKAVQGRGMCK----- 203
            +  +E+++MVD GATHNFISL+ V++L +P+    N+ + +G+   V+G+G C+     
Sbjct: 439 VINGQEVVVMVDPGATHNFISLRAVEKLAIPLIGEANFGVSLGTGTMVKGKGECQGVMLE 498

Query: 204 ----------------------DITWLRKQGATTVDWKALTMTFIVGDTNVILKGDPSLT 255
                                  + WL K G+ T +WK+  M F +G   V L+GDPSL 
Sbjct: 499 IQGLVIRENFLPLDLGNSDIILGVQWLEKLGSVTTNWKSQLMKFKIGREEVTLQGDPSLD 558

The following BLAST results are available for this feature:
BLAST of Cucsa.192370 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GC35_CUCME1.5e-6354.81Gypsy/ty3 element polyprotein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GC18_CUCME1.1e-4747.96Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GC18_CUCME4.6e-0952.24Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A5B2I6_VITVI2.4e-2943.11Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1[more]
A0A087GH17_ARAAL2.7e-2538.33Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G098300 PE=4 SV=1[more]
BLAST of Cucsa.192370 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G29750.13.9e-0729.69 Eukaryotic aspartyl protease family protein[more]
AT3G30770.15.1e-0726.89 Eukaryotic aspartyl protease family protein[more]
BLAST of Cucsa.192370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|307136196|gb|ADN34034.1|2.1e-6354.81gypsy/ty3 element polyprotein [Cucumis melo subsp. melo][more]
gi|307136175|gb|ADN34016.1|1.6e-4747.96ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo][more]
gi|307136175|gb|ADN34016.1|6.7e-0952.24ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo][more]
gi|147854459|emb|CAN78588.1|3.4e-2943.11hypothetical protein VITISV_043911 [Vitis vinifera][more]
gi|731338584|ref|XP_010680400.1|7.8e-2636.95PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Beta vulgaris subsp. vulgari... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.192370.1Cucsa.192370.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domainunknownSSF50630Acid proteasescoord: 127..234
score: 3.2
NoneNo IPR availableunknownCoilCoilcoord: 30..50
scor

Synteny