Cucsa.192250 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.192250
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionABC transporter G family member 37
Locationscaffold01333 : 140473 .. 141496 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAATTGTTTGAAGATTTGAAGGCTAATGAGTCAATTGGGACGGGCGGTTGATGTCAATGATCCTTGAGAACTTTCTTCCAAAATGCTAAATAAGTCAGTCTAAATGGTTTATGAATTCTTTCATTTGCACAAACACTCTACTTTCCACTTGACCTTTTAAATTCGAAAGTACAAAGAAGGGGACTTAGCTAAAATCTCTTTTCTTTTGACGAATGATATAATGAACAATCAAAAGCTTAAATTGATAAATAATGGTAAAATTTGTATGTATATATATATATATATATTTGTATTCATCACTAAACTAAAAAACTTAAGTTGACTAATTAAGATGGAATCATTTCATTTCTTGTAATTCTTTAAACTAAGACAAGGAAACTTTTCTTCATTTCAAAGTTAGAGAAGCAAAAGACTGAACATGGACTAAAGTTTTGTTTTTCTCCTGCTTAATTACTTTATCAAGAAATATTACTTGTAAAGACCATGAAGTAAGATGCTATCATTTGCTAGATATCTATGAACAAATCGATGTACATTCTTCACAAATAACTGTTGAAGAATCTCTGTTCTTCTCTGCTTGGCTCTGTTTGTCACCTGAAATTGACTCAAAAACAAAAGCAGTATGTTTTCCTGTTGTTTTCTTCAAATGATAAAaTTTAAATGGCCATTGATTAACTCACCAAGGATAACTTGTAATTTAGATTGACATTAGTTTCTTGTTTTATAGCAATCTGTAAATGAAGTCCTTGAGACCACTGAACTTAATAGCATAATGGATTCCTTAGTTGGGATACCTGGTGTCAGTGGCCTATCAACCTAGCAACGTAAACTTTTAATCATAGTTGTGGAGCTTGTTTCCAACCCCTCTATCATTTTCATGGATGAGCCTACCACTGGTTTATATTGCAAGGCAGCTGCAATTGTCATGCGAGCCATCAAGAATGTGGCTGATACTGGAAGAACAATAGTTTGTACCATCCATCAGCCAAGTATTGACATCTTTGAATTTTTTGATCAG

mRNA sequence

ATGGAGGAATTGTTTGAAGATTTGAAGGCTAATGAGTCAATTGGGACGGGCGATATCTATGAACAAATCGATGTACATTCTTCACAAATAACTGTTGAAGAATCTCTGTTCTTCTCTGCTTGGCTCTGTTTGTCACCTGAAATTGACTCAAAAACAAAAGCACAATCTGTAAATGAAGTCCTTGAGACCACTGAACTTAATAGCATAATGGATTCCTTAGTTGGGATACCTGTTGTGGAGCTTGTTTCCAACCCCTCTATCATTTTCATGGATGAGCCTACCACTGGTTTATATTGCAAGGCAGCTGCAATTGTCATGCGAGCCATCAAGAATGTGGCTGATACTGGAAGAACAATAGTTTGTACCATCCATCAGCCAAGTATTGACATCTTTGAATTTTTTGATCAG

Coding sequence (CDS)

ATGGAGGAATTGTTTGAAGATTTGAAGGCTAATGAGTCAATTGGGACGGGCGATATCTATGAACAAATCGATGTACATTCTTCACAAATAACTGTTGAAGAATCTCTGTTCTTCTCTGCTTGGCTCTGTTTGTCACCTGAAATTGACTCAAAAACAAAAGCACAATCTGTAAATGAAGTCCTTGAGACCACTGAACTTAATAGCATAATGGATTCCTTAGTTGGGATACCTGTTGTGGAGCTTGTTTCCAACCCCTCTATCATTTTCATGGATGAGCCTACCACTGGTTTATATTGCAAGGCAGCTGCAATTGTCATGCGAGCCATCAAGAATGTGGCTGATACTGGAAGAACAATAGTTTGTACCATCCATCAGCCAAGTATTGACATCTTTGAATTTTTTGATCAG

Protein sequence

MEELFEDLKANESIGTGDIYEQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIPVVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQPSIDIFEFFDQ
Homology
[Close]
BLAST of Cucsa.192250 vs. Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.4e-40
Identity = 87/131 (66.41%), Postives = 99/131 (75.57%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS QITVEES+ FSAWL L P+IDSKTK + V EV+ET EL+ I   LVG+P   
Sbjct: 938  EQTDIHSPQITVEESVIFSAWLRLHPQIDSKTKYEFVKEVIETIELDGIKGMLVGMPGVS 997

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELV+NPSIIFMDEPTTGL  ++AAIVMRA+KNVADTGRTIVCTIHQ
Sbjct: 998  GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARSAAIVMRAVKNVADTGRTIVCTIHQ 1057

[Close]
BLAST of Cucsa.192250 vs. Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.4e-39
Identity = 86/131 (65.65%), Postives = 99/131 (75.57%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS  ITVEES+ +SAWL L+PEID+ TK + V +VLET EL+ I DSLVG+    
Sbjct: 941  EQTDIHSPNITVEESVIYSAWLRLAPEIDATTKTKFVKQVLETIELDEIKDSLVGVTGVS 1000

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELV+NPSIIFMDEPTTGL  +AAAIVMRA+KNVADTGRTIVCTIHQ
Sbjct: 1001 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQ 1060

[Close]
BLAST of Cucsa.192250 vs. Swiss-Prot
Match: AB41G_ORYSJ (ABC transporter G family member 41 OS=Oryza sativa subsp. japonica GN=ABCG41 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.4e-39
Identity = 83/131 (63.36%), Postives = 101/131 (77.10%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ DVHS QITVEES+ +SAWL L  E+DSKT+ + V+EV++T EL+ I D+LVG+P   
Sbjct: 929  EQTDVHSPQITVEESVAYSAWLRLPTEVDSKTRREFVDEVIQTIELDDIRDALVGLPGVS 988

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPS+IFMDEPT+GL  +AAAIVMRA+KNVADTGRT+VCTIHQ
Sbjct: 989  GLSTEQRKRLTIAVELVSNPSVIFMDEPTSGLDARAAAIVMRAVKNVADTGRTVVCTIHQ 1048

[Close]
BLAST of Cucsa.192250 vs. Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 5.4e-39
Identity = 86/131 (65.65%), Postives = 98/131 (74.81%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS  ITVEESL +SAWL L   IDSKTK + V EVLET EL+ I DS+VG+P   
Sbjct: 891  EQFDIHSPNITVEESLKYSAWLRLPYNIDSKTKNELVKEVLETVELDDIKDSVVGLPGIS 950

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELV+NPSIIFMDEPTTGL  +AAAIVMRA+KNVA+TGRT+VCTIHQ
Sbjct: 951  GLSIEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVAETGRTVVCTIHQ 1010

[Close]
BLAST of Cucsa.192250 vs. Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-38
Identity = 84/131 (64.12%), Postives = 97/131 (74.05%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS  +TV+ESL +SAWL L+  I S+TK   VNEVLET EL  I DS+VGIP   
Sbjct: 883  EQFDIHSPNLTVQESLKYSAWLRLTSNISSETKCAIVNEVLETIELEEIKDSIVGIPGIS 942

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPSIIFMDEPTTGL  +AAAIVMRA+KN+A+TGRT+VCTIHQ
Sbjct: 943  GLTTEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNIAETGRTVVCTIHQ 1002

[Close]
BLAST of Cucsa.192250 vs. TrEMBL
Match: A0A0A0LEL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G813820 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.6e-45
Identity = 102/131 (77.86%), Postives = 107/131 (81.68%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ DVHSSQITVEESLFFSAWL L+PEIDSKTKAQ VNEVLET EL+SI DSLVGIP   
Sbjct: 919  EQTDVHSSQITVEESLFFSAWLRLAPEIDSKTKAQFVNEVLETIELDSIKDSLVGIPGVS 978

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPSIIFMDEPTTGL  +AAAIVMRA+KNVADTGRTIVCTIHQ
Sbjct: 979  GLSTEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQ 1038

[Close]
BLAST of Cucsa.192250 vs. TrEMBL
Match: A0A067DU84_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015591mg PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.2e-41
Identity = 92/131 (70.23%), Postives = 103/131 (78.63%), Query Frame = 1 

Query: 21  EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
           EQ D+HS QITVEES+ FSAWL L+PEI+SKTKA+ VNEVLET EL+ I DSLVGIP   
Sbjct: 270 EQTDIHSPQITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDGIKDSLVGIPGVN 329

Query: 81  ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                        VELV+NPSIIFMDEPTTGL  +AAAI+MRA+KNV DTGRTIVCTIHQ
Sbjct: 330 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIIMRAVKNVVDTGRTIVCTIHQ 389

[Close]
BLAST of Cucsa.192250 vs. TrEMBL
Match: A0A061F362_THECC (Pleiotropic drug resistance 9 OS=Theobroma cacao GN=TCM_026826 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.8e-41
Identity = 91/131 (69.47%), Postives = 104/131 (79.39%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS QITVEES+ FSAWL L+P+IDSKTKA+ VN+VLET EL+ I D+LVGIP   
Sbjct: 944  EQSDIHSPQITVEESVMFSAWLRLAPQIDSKTKAEFVNQVLETIELDEIKDALVGIPGVS 1003

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELV+NPS+IFMDEPTTGL  +AAAIVMRA+KNVADTGRTIVCTIHQ
Sbjct: 1004 GLSTEQRKRLTIAVELVANPSVIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQ 1063

[Close]
BLAST of Cucsa.192250 vs. TrEMBL
Match: F6I4H1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00470 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-40
Identity = 90/131 (68.70%), Postives = 103/131 (78.63%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS QIT+EES+ FSAWL LSP+IDSKTKA+ VNEVLET EL+ I D+LVG+P   
Sbjct: 939  EQTDIHSPQITIEESVIFSAWLRLSPQIDSKTKAEFVNEVLETIELDGIKDALVGMPGVG 998

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPSIIFMDEPT+GL  +AAA+VMRA+KNV DTGRTIVCTIHQ
Sbjct: 999  GLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVDTGRTIVCTIHQ 1058

[Close]
BLAST of Cucsa.192250 vs. TrEMBL
Match: A5BJT7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037751 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-40
Identity = 90/131 (68.70%), Postives = 103/131 (78.63%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS QIT+EES+ FSAWL LSP+IDSKTKA+ VNEVLET EL+ I D+LVG+P   
Sbjct: 908  EQTDIHSPQITIEESVIFSAWLRLSPQIDSKTKAEFVNEVLETIELDGIKDALVGMPGVG 967

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPSIIFMDEPT+GL  +AAA+VMRA+KNV DTGRTIVCTIHQ
Sbjct: 968  GLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVDTGRTIVCTIHQ 1027

[Close]
BLAST of Cucsa.192250 vs. TAIR10
Match: AT3G53480.1 (AT3G53480.1 pleiotropic drug resistance 9)

HSP 1 Score: 163.7 bits (413), Expect = 8.0e-41
Identity = 86/131 (65.65%), Postives = 99/131 (75.57%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS  ITVEES+ +SAWL L+PEID+ TK + V +VLET EL+ I DSLVG+    
Sbjct: 941  EQTDIHSPNITVEESVIYSAWLRLAPEIDATTKTKFVKQVLETIELDEIKDSLVGVTGVS 1000

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELV+NPSIIFMDEPTTGL  +AAAIVMRA+KNVADTGRTIVCTIHQ
Sbjct: 1001 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQ 1060

[Close]
BLAST of Cucsa.192250 vs. TAIR10
Match: AT4G15230.1 (AT4G15230.1 pleiotropic drug resistance 2)

HSP 1 Score: 161.8 bits (408), Expect = 3.0e-40
Identity = 86/131 (65.65%), Postives = 98/131 (74.81%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS  ITVEESL +SAWL L   IDSKTK + V EVLET EL+ I DS+VG+P   
Sbjct: 891  EQFDIHSPNITVEESLKYSAWLRLPYNIDSKTKNELVKEVLETVELDDIKDSVVGLPGIS 950

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELV+NPSIIFMDEPTTGL  +AAAIVMRA+KNVA+TGRT+VCTIHQ
Sbjct: 951  GLSIEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVAETGRTVVCTIHQ 1010

[Close]
BLAST of Cucsa.192250 vs. TAIR10
Match: AT4G15215.1 (AT4G15215.1 pleiotropic drug resistance 13)

HSP 1 Score: 160.6 bits (405), Expect = 6.8e-40
Identity = 85/131 (64.89%), Postives = 97/131 (74.05%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS  ITVEESL +SAWL L   ID+KTK + V EVLET EL  I DS+VG+P   
Sbjct: 881  EQFDIHSPNITVEESLKYSAWLRLPYNIDAKTKNELVKEVLETVELEDIKDSMVGLPGIS 940

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPSIIF+DEPTTGL  +AAAIVMRA+KNVA+TGRT+VCTIHQ
Sbjct: 941  GLSTEQRKRLTIAVELVSNPSIIFLDEPTTGLDARAAAIVMRAVKNVAETGRTVVCTIHQ 1000

[Close]
BLAST of Cucsa.192250 vs. TAIR10
Match: AT4G15233.2 (AT4G15233.2 ABC-2 and Plant PDR ABC-type transporter family protein)

HSP 1 Score: 160.6 bits (405), Expect = 6.8e-40
Identity = 84/131 (64.12%), Postives = 97/131 (74.05%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS  +TV+ESL +SAWL L+  I S+TK   VNEVLET EL  I DS+VGIP   
Sbjct: 883  EQFDIHSPNLTVQESLKYSAWLRLTSNISSETKCAIVNEVLETIELEEIKDSIVGIPGIS 942

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPSIIFMDEPTTGL  +AAAIVMRA+KN+A+TGRT+VCTIHQ
Sbjct: 943  GLTTEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNIAETGRTVVCTIHQ 1002

[Close]
BLAST of Cucsa.192250 vs. TAIR10
Match: AT4G15236.1 (AT4G15236.1 ABC-2 and Plant PDR ABC-type transporter family protein)

HSP 1 Score: 159.8 bits (403), Expect = 1.2e-39
Identity = 84/131 (64.12%), Postives = 97/131 (74.05%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS  +TV+ESL +SAWL L   I S+TK+  VNEVLET EL  I DSLVG+P   
Sbjct: 879  EQFDIHSPNLTVQESLKYSAWLRLPCNISSETKSAIVNEVLETIELEEIKDSLVGVPGIS 938

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPSIIFMDEPTTGL  +AAAIVMRA+KN+A+TGRT+VCTIHQ
Sbjct: 939  GVTAEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNIAETGRTVVCTIHQ 998

[Close]
BLAST of Cucsa.192250 vs. NCBI nr
Match: gi|778684998|ref|XP_004136753.2| (PREDICTED: pleiotropic drug resistance protein 3 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 6.6e-45
Identity = 102/131 (77.86%), Postives = 107/131 (81.68%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ DVHSSQITVEESLFFSAWL L+PEIDSKTKAQ VNEVLET EL+SI DSLVGIP   
Sbjct: 919  EQTDVHSSQITVEESLFFSAWLRLAPEIDSKTKAQFVNEVLETIELDSIKDSLVGIPGVS 978

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPSIIFMDEPTTGL  +AAAIVMRA+KNVADTGRTIVCTIHQ
Sbjct: 979  GLSTEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQ 1038

[Close]
BLAST of Cucsa.192250 vs. NCBI nr
Match: gi|659084937|ref|XP_008443153.1| (PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-43
Identity = 100/131 (76.34%), Postives = 106/131 (80.92%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ DVHSSQITVEESLFFSAWL L+PEIDSKTKAQ VNEVLE  EL+SI DSLVGIP   
Sbjct: 925  EQTDVHSSQITVEESLFFSAWLRLAPEIDSKTKAQFVNEVLEIIELDSIKDSLVGIPGVS 984

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPSIIFMDEPTTGL  +AAAIVMRA+KNVADTGRTIVCTIHQ
Sbjct: 985  GLSTEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQ 1044

[Close]
BLAST of Cucsa.192250 vs. NCBI nr
Match: gi|659084939|ref|XP_008443154.1| (PREDICTED: pleiotropic drug resistance protein 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-43
Identity = 100/131 (76.34%), Postives = 106/131 (80.92%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ DVHSSQITVEESLFFSAWL L+PEIDSKTKAQ VNEVLE  EL+SI DSLVGIP   
Sbjct: 924  EQTDVHSSQITVEESLFFSAWLRLAPEIDSKTKAQFVNEVLEIIELDSIKDSLVGIPGVS 983

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELVSNPSIIFMDEPTTGL  +AAAIVMRA+KNVADTGRTIVCTIHQ
Sbjct: 984  GLSTEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQ 1043

[Close]
BLAST of Cucsa.192250 vs. NCBI nr
Match: gi|641823148|gb|KDO42587.1| (hypothetical protein CISIN_1g015591mg [Citrus sinensis])

HSP 1 Score: 175.3 bits (443), Expect = 7.5e-41
Identity = 92/131 (70.23%), Postives = 103/131 (78.63%), Query Frame = 1 

Query: 21  EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
           EQ D+HS QITVEES+ FSAWL L+PEI+SKTKA+ VNEVLET EL+ I DSLVGIP   
Sbjct: 270 EQTDIHSPQITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDGIKDSLVGIPGVN 329

Query: 81  ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                        VELV+NPSIIFMDEPTTGL  +AAAI+MRA+KNV DTGRTIVCTIHQ
Sbjct: 330 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIIMRAVKNVVDTGRTIVCTIHQ 389

[Close]
BLAST of Cucsa.192250 vs. NCBI nr
Match: gi|590645040|ref|XP_007031243.1| (Pleiotropic drug resistance 9 [Theobroma cacao])

HSP 1 Score: 174.9 bits (442), Expect = 9.8e-41
Identity = 91/131 (69.47%), Postives = 104/131 (79.39%), Query Frame = 1 

Query: 21   EQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIP--- 80
            EQ D+HS QITVEES+ FSAWL L+P+IDSKTKA+ VN+VLET EL+ I D+LVGIP   
Sbjct: 944  EQSDIHSPQITVEESVMFSAWLRLAPQIDSKTKAEFVNQVLETIELDEIKDALVGIPGVS 1003

Query: 81   ------------VVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQ 137
                         VELV+NPS+IFMDEPTTGL  +AAAIVMRA+KNVADTGRTIVCTIHQ
Sbjct: 1004 GLSTEQRKRLTIAVELVANPSVIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQ 1063

The following BLAST results are available for this feature:
BLAST of Cucsa.192250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PDR3_TOBAC6.4e-4066.41Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1[more]
AB37G_ARATH1.4e-3965.65ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1[more]
AB41G_ORYSJ5.4e-3963.36ABC transporter G family member 41 OS=Oryza sativa subsp. japonica GN=ABCG41 PE=... [more]
AB30G_ARATH5.4e-3965.65ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2[more]
AB42G_ARATH1.2e-3864.12ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1[more]
BLAST of Cucsa.192250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEL9_CUCSA4.6e-4577.86Uncharacterized protein OS=Cucumis sativus GN=Csa_3G813820 PE=3 SV=1[more]
A0A067DU84_CITSI5.2e-4170.23Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015591mg PE=3 SV=1[more]
A0A061F362_THECC6.8e-4169.47Pleiotropic drug resistance 9 OS=Theobroma cacao GN=TCM_026826 PE=3 SV=1[more]
F6I4H1_VITVI1.2e-4068.70Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00470 PE=3 SV=... [more]
A5BJT7_VITVI1.2e-4068.70Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037751 PE=3 SV=1[more]
BLAST of Cucsa.192250 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G53480.18.0e-4165.65 pleiotropic drug resistance 9[more]
AT4G15230.13.0e-4065.65 pleiotropic drug resistance 2[more]
AT4G15215.16.8e-4064.89 pleiotropic drug resistance 13[more]
AT4G15233.26.8e-4064.12 ABC-2 and Plant PDR ABC-type transporter family protein[more]
AT4G15236.11.2e-3964.12 ABC-2 and Plant PDR ABC-type transporter family protein[more]
BLAST of Cucsa.192250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778684998|ref|XP_004136753.2|6.6e-4577.86PREDICTED: pleiotropic drug resistance protein 3 [Cucumis sativus][more]
gi|659084937|ref|XP_008443153.1|1.2e-4376.34PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo][more]
gi|659084939|ref|XP_008443154.1|1.2e-4376.34PREDICTED: pleiotropic drug resistance protein 3-like isoform X2 [Cucumis melo][more]
gi|641823148|gb|KDO42587.1|7.5e-4170.23hypothetical protein CISIN_1g015591mg [Citrus sinensis][more]
gi|590645040|ref|XP_007031243.1|9.8e-4169.47Pleiotropic drug resistance 9 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.192250.1Cucsa.192250.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 80..127
score: 3.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..128
score: 2.99
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 21..135
score: 1.8
NoneNo IPR availablePANTHERPTHR19241:SF259ABC TRANSPORTER G FAMILY MEMBER 33-RELATEDcoord: 21..135
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.192250Csa3G653390Cucumber (Chinese Long) v2cgycuB294
Cucsa.192250CSPI03G28980Wild cucumber (PI 183967)cgycpiB303
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.192250Cucurbita pepo (Zucchini)cgycpeB0535
Cucsa.192250Cucurbita pepo (Zucchini)cgycpeB0536
Cucsa.192250Cucurbita pepo (Zucchini)cgycpeB0540
Cucsa.192250Bottle gourd (USVL1VR-Ls)cgylsiB327
Cucsa.192250Melon (DHL92) v3.6.1cgymedB343
Cucsa.192250Silver-seed gourdcarcgyB0143
Cucsa.192250Silver-seed gourdcarcgyB0860
Cucsa.192250Silver-seed gourdcarcgyB0929
Cucsa.192250Silver-seed gourdcarcgyB0930
Cucsa.192250Cucumber (Chinese Long) v3cgycucB307
Cucsa.192250Watermelon (97103) v2cgywmbB355
Cucsa.192250Watermelon (97103) v2cgywmbB356
Cucsa.192250Wax gourdcgywgoB396
Cucsa.192250Cucurbita maxima (Rimu)cgycmaB0554
Cucsa.192250Cucurbita maxima (Rimu)cgycmaB0556
Cucsa.192250Cucurbita maxima (Rimu)cgycmaB0557
Cucsa.192250Cucurbita maxima (Rimu)cgycmaB0559
Cucsa.192250Cucurbita moschata (Rifu)cgycmoB0555
Cucsa.192250Cucurbita moschata (Rifu)cgycmoB0556
Cucsa.192250Cucurbita moschata (Rifu)cgycmoB0557
Cucsa.192250Cucurbita moschata (Rifu)cgycmoB0558
Cucsa.192250Cucurbita moschata (Rifu)cgycmoB0559
Cucsa.192250Melon (DHL92) v3.5.1cgymeB348
Cucsa.192250Watermelon (Charleston Gray)cgywcgB349
Cucsa.192250Watermelon (Charleston Gray)cgywcgB350
Cucsa.192250Watermelon (97103) v1cgywmB371
Cucsa.192250Watermelon (97103) v1cgywmB372