Cucsa.178980 (gene) Cucumber (Gy14) v1

NameCucsa.178980
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRegulatory particle non-ATPase 13
Locationscaffold01227 : 1378781 .. 1390239 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACGAGAAGGAAATAAGAGAATAAATATCTCAATCTACAAATTCAGTGCTCTCTTCCTCTTCGGGTTCCCATTTTCCAACTACTTTCTCTATCGATTTCTTGGTATAATCATCTCCTTCCACCTTTACGATTCATTCTTTTtCACCTGTTTCTTTGCTCAATCTTTTTtCATTTCAACCCTCAAAaGGGTTTCTTGTATTATGAGGTTTAGTTGATTTGATATGCGTACTTtCTTTTTTTTTTttttGTTtCAAACTTTATTGGGTTTGTGTGTTTCTTTAATTGGATTATTtGTTTTtAAGTTtCTTTTGCTCTGTGGTAGTTCTCTTGTTGTTGGAAGTTGAATTGAATAAGTGAAGATATGGACTCGTCGTCTACAGAGGCTGTTCCAGAAATGCAGGTAAAATGTTTAGGCTTCTTATCCAATGTATTTTACAGTACATGTACGTATTGCTATCAAAACATTGATTCGTTTTGCGAGTATATACTTGGAAGCAGGGAGAGGTAGGGAGTCTATCCTGCTGCATGTTTAACTTCTGTAAATAAATTTTCAGTTTGATCATTGGAGCTAATTTTTATCGACGAATTACTTTGATCGATAACGTCTCTATTAAGGAAAATGATAGAACAGAGGCTGCCTAATATGAAGAAACTGTGGGAGTCTGTTTTTATTACATTGGTCTTCCTCTGGGCAGTAATCCTAAATCTTTAGTTTTTTGGAATCCCGTGGTGGATAAAGTTAAAGAAAGACTTGCCTCATAAAGAAGGGTTTCTTTTTAATATATGGTTGGCTTACCTTAATCAGGTCTATGTTGAGTGGTATTCCGGCGTATTCTTTTTCTTCTTCAGAGCCCGTGGGAGGTTTCAAGCTTTTGGAAAGGATGATGCCAATTTCCTTTGATAAGGAGAGGAGGAAGGAAAAGGTAAAGGATCAACGATCACAGTTGTTAGGTGGGAGATCATTGAGAGGCAATTGAGTTTGAGGAGTTAGAGATCAAGAATTTTAGGCTTCGTAATAGATCTTTGTTAGCTAAGTAGTTGTGGTGGTTCCACCTTGAGCATCTTTGCAATAAGAATATTTCTAGTAAACACGGTCCTCATCCTTTTtAAGTGGCTGACGAAAGGGGTTAAAGGCATCTACCGGAAATTGTGGAAGGATGTTTCCAATGAGCTCCCTTCTCTTGTTCACATTGTCCATTATGTGTTGGTAGAAAGGAATAACATGTACTTTTGGGAAGATCAGTGGGTGGGGGATATGCCTTTTTGTTCTTTATCTCTTCATCTTTACCTTTTTtCTTCCCTTAAAAATCATCTTGCGTCTGATTTCTTGGTTAGGGATGGATGATAGGTGCTCCTGTTCATTCTCTCTTCTATTGGGAAGTGACTGGCGTAACCTATCTTTCGTCTTTACTTGAGGGTTACTCTTTTAGGCGTGGGAGAAGGGATTTGAGGGTCTGGAGTCCCAATCCTTTGGAGGGATTCTCTTGCAAGTCTCTTTTTAGTTGTTTGTTTGACCCTTTTCCCcTTGATGAGTTGGTCTTTTCTGTGCTGTGGAAGATTGAGATCCTAAGGAAAGTGAATTTTTTtACCTGGCAAGTCTTGCTCGGCCAACATGATGGATCAGCTTGCTAGGAAGCTTCCCTCGCTTGTTGGTCCACTTCGTTGTATTATCTATTGGTAGGCAGATGAAGACTCGAATCATATTATTTTGCGTTGTGAATTTGTGAGAGCTGCCTGCCATTCTTTtTTTTTTttCAGACACTTAGGTTCCTACTTGTTTGGCATGGTTACTAGTGAAATGATTGGGGAGTTCCTTCTTCATCCGCCTTTTCGTGAGAAGAGACGCTCCTTATGGGTGGTGGGGGGTGGACCGTTCTTTGGGTTTTCTGGGGGGAGTGGAATAACAAGTTGTTTAGGGGTTCTAAGAGGGGTTCTTTTGAGATTTAGTCTCTGGTTAGATATGTTTCTCTTTGGACTTTGGTTTCGACAACTTTTTTATTACTACTCTTTAGGCCCAATTCTGTATAGTTGGAATCCCTTCTTCTAGGGGGGCTTCCTTTCTCTTTTGATGGGGTTGATTTTGTTTATTCCTGTATTGCTGTATTCTTTCATTTTTATCTCAATGAAAATTGTTTCCTAAAAAAAATCATAAATTCAACAGAAAGAAAATTATTCACATAAAAAAGCTTAGGATTGTTTCTCCTAAAGAAATAATACAATAATTCTGGATAGCCAGTCTACTAGAATCATTTATATTTATATTCTCACTTTTTATTTTGGTTAACATTTTATTTGTCCCAAATTAATCGATCCTGTGGCAGGAAATACTTCTGGAGTTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAAAGGGTTGTACCCGATACACGCAAAGGACTTGTTCGTATTGGAAGGGTGAGTTTGAACTTTTTCTTGTTTATATAATCTGATCTTTCTGTTATATGTTAATTGTGGAATTGGTTTTCTTTAGAGCATTCTACTGCTTTGCCATATACAAAATTTTGCATTTGGTTTCTTTTTAAGAGATTGTATTCTCAGTTGTCCAAAATTATGATACACAATGGCTTTAGAACCAAATTTTGGGCTGTTGTATGGGTTGGCAGCTGGTTGGTTTATTTATGGTGTCTAATTTTTTTTtACCGTCCTTTTCCCTTTAGCTTTCCTCATATACCTCCAATGTCAAGTCTCTTACCCATCATTAAAAACGTGTGCCTGCTATGAACCTAAGACACCACCATGTCGAGTCCCCTTACTTGTGGCTTTTGATTCATAATACTCTCATATATCCTATCTTTCGGGACAAATGAAGAGTTCTTTGGCAGGATTGTATCTTTGGAGTGTATTGGGGCTTATTGTTTGTGATGATTAGGCATACTGATGTTAATGAGAGAATTTTATTAATGTTTTGAAGTTCTGAATACAAGAAGACAAGTACTCTATTTATAGGAAACTAATCCAAATCCTAATAAATAAAAGAAACTAACCCTTAATCCTAATAAATAAAAGAAACTAATCATAATCCTAATAGATTAAGGATTACACCATAGTATCCTATTCCTACAACATCACATGCTTTTATCAGTTTATGGGTTTGGAGGAATTTGAGATTGAAGTGTGGGATATTATGATATTTAATGCCTCATAATGGGCTTTGGTCCCTCCCCCTCTTATAGATTATTAGGTAGGTATTTTTCTCTTGGATTTGAGTTGATTTCATAGTTAGTACCATTTTTtAGTGTCTGAGCAAGCTTATGTGCATTTCGACTGATCTCACAGGACAACCTGCCTAACTCTACAACATTTAGGTGTCAAGAAAACTCATATGATTTAATTTCTAGGAAGATGGTCACCCTAGATTGAAACCATGACTTCTTAGCCCTTTATGGAGGCAACGTCTCCTTTTTtACCATCGGGCCAATCCATGATGGTTCATTTCATAGTTAGTATTGTCAATTATGACTTTACTCTTTTTTGGAAGGGGGCGATTCTTTTTATACCTACATATAATTTTCCTCCGTGAAAGCATTCTCATTGTTGTTATTTTTTACAAAATACTACATGTTGAGCTGGAGGTATTAGTCCTTCCCTCCAAGTTTGTCATCTTTTTCAAGAAATTATATGTAGCCTCTCTTGGGAATTGGGATTTAGAGAAGAAAACATATCATTAGATGGCGTACTCGGAAGAACCAAGCACTGGAAAGGACTAAGCATATCAAAATCAACTTTCCTCCACTTTCCTCCACCTCCCTCCATATTTTTAACCATCATAGGTTGGTCTCGTCTAGTAGTAACCAAGGAGACATAGACTCAATAACTAATTAAGAGGTCATGGGTTCAATCCATGGTTGTCATCTACCTAAAATTGATATGACTCCCAAAAGTTTGTTTAGGATTTAAATTGATACATTTATTAGTTTGTGGTTAAAATTGATATGACTCCCAAAAGTTCAAGGTTAAAATTGATACAATTATTAGTTTAAGGTTTAAATTGATGCAAACCCCAAAGTTCAGGGGTATAAATTTTGAATTTTtCCCTTTAATAAATTTATTTGCCTTAGCGTTGTTATGTATGAGTGGATCTGTTTTAATTATGTTTTCCCGTTGAACCTAATCCTTCATAAGATTAAATTAAAATTTGGACCTTGTTTTTATCTTTTCATACAGGGTGAGGAGGGATTGCTGCACTTTCAATGGATTGATCGGACGCAAAATGTCATTGAAGATGTATCCTGATCGTTATTGTGTTAATGGTCAATTCTTTGTGTTTGGCTAATGCATGTACCTTTCAAAGATCCCGGGTTGATTATTTCTTTTGGTTATTAACTTAAGAATGTATGGTTCTAACTCGAACATTTGATTCACTTGACTTTTAAAGCCTCACCCTCGCTAAAAAAAGGACAAAAGATAAAGGCAAGTTGAAAAGAGTCCTACTTCAGAGAATACAAAAAAaGAGAGGGAGAACAAATTGTATATAGATAAGTCCAGCAGTGCACCTACTTTTTGAGCCTAATGATGAGATTTTCTCTTTCTTCCCACGGTTAATTAAACTTCATGATGAAATACTCTTCTTCTACACACACACACGCAATCCCATCATTAAATATTATGATTTCTGATACGTCATGGTTGAAATTGAAATGCAATGGAATGACAATGAACTATGCTGGATCATCATTGTGAACAAACTCTTGTTAACGGAAGTAGATAGTGGGCTGGCTTTTTCTGCAAGCAATGAAAATTATCTTAATTTTAATTTCTTAATTTTTTtATTTGTGTTTTTCATGGAGTGGTTGATACATTCTGTTTATGATGGCTTTTGTGTTGACAGCACCGTATTTTTTTtATTCGTATATTCATTAAACTTTATTTTTCGATGGACGGTATGTTCTTCCAAATGCAAGGATGTCAAAAAGTTATAAGATCATATTCATTATGCTGTTGCATCTGACTCTTCTCTATTCCACAGCTATGACTTTTTTCTGTTATTGCCATTTTACTGGCTAGATTTTTTtCTTTATTTTCCTTAATACGAGGTATACAGGATCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTGTGTAATACTCTCTCTGTCTCTCTCTGTCCCTTAAAAAAGCACTAATATCATTAAAGAAATTGGAAAAACTATACAAAGAGGGGAAATTGAAGAACTAAGAGTGCATCCTAACTCAAGAGGCTAAGGATCTCCAATCAAACAGTAGTCGGAAAAGAAGAGAGTTGCCATACCTTTCTGCAGTTAGATGCTTATAGAGATACGTTAAGACATGTGTTTCGATGCACCCTTATGTTTACATCTATAGCAAACAATTCTTCCATCTCTCTAGTCTCTGAAGAGACCTCCGACAATGCTGCCATAGTGAACTTTGTGTCCTCACAATTTAGCTGAAAAGTTCAAACAACTAATCTCCCCACTTCTATAGAAACAGAGGTGATTGATATTtTCTTTGGTTGGTCAACTCCTCTCCCACAGAACATCCGAACCACACTGAAAAGTTCAAACAACTGATCTCCTACTTCTATGATCGCAAGCATTGAACAGAGAGGTGATTGATATTTTCTTtGTTTGGTCAACACTTCTCCCACAGAACATCCAAAACCTACTCTTATATGTTCTCATGGGCCACCCTTTCAACAAACACAAGAAAATCATGTGGTCATACCTAATTCGAGTGTTTCTATGGCTCTCTGTCCAAGTCCATAGATTAGTGCAGGGAGCCATAGAAACAACCACATCTTCAAGGATAATAAGAAATCATTTGAAGCAATCTTGGAATACCCTATCTAGTTAGCTATGACATGGTGCAAATGTACTTTTTTGAATTCGTCTGATCTAACATCTCTTATAACCAATTGGAGAAATATTATGTAACTGCTTTGGCTCTGGACATGTTGCCCACTACGTATTTTCATTTATCAATGAAAATAATTTCTTATAAACAAGTATATTTTCCTCTTTTATAAGGACGTGCATGCTCTGATTGAACAAGGTGTATCTTTGACTTTGAATCTACTTGTTATTTAGCATTGTGATTCCTGTAGAACACCAATGTCCTAACAAAGATTCAATCTATTGGGGGGCTTTGGATTTCTATCTATAGATTAGCGTAGGGAGTAACACATTGATGCTATGCCCTAGGCCCCTATACCAATTTTTCATAATGATTTGCATGAAAACACACTCGATGCTTCTAACAATCATAATCTTAATCTCAAGTCATGCCTGGAGTGATGTAATCTACCCTTTCCTAGATTATTAGAATTGGTGGCTGCATCTTCAGTTATCCTCTCATTCATATGTCTTTAGAAACTCAAAATTCCAAGATGTGATTAGCTCTATTCGAGTGAGCGGAGTGTGAATAGAAGAAAATTTAATGGAGTAGCTACTTTGTGACAATAAGAGAGGGATTTTGTAATTCCTTTGACTTATTTGCATGTTTCATTGTTCCAATGAATGTCTTGTTAGTTATGTAATAGGAAGGGTGCTAGTTCGTGAAATAACTCCAGTCATTGTGAATGCTTTCTGGATTTTAGTTACTCCAACCATTGACAATGACTGTTTCACACTAGTTATTTCTTCGAGGAATCTCCAAATATCAATAATTAATATGTCACTTCTAAGCTATATTTGAAGTCATCTTACCATGTTAATGTTCCCACAATGACCTTAACTATCATGAAATCAATAAATGGCTTTTTAAGGGCAAACGAAGCTTTCAAATAATGAAATAATACATATGAATGAACAAAAGTAACCCTAGAAAAGGATTTCAAACCGTAACTACAGAAACAGACGCTGATTCAAAAGTACTAAACCAAATTGATAATTACAAAATGCTCTAGAAAACTGACTTTACAAGATGCTGAAGAAACCAATAAATGATAATTACAAAAAAAaaTTGTTACATTTTCATTCATGGTTAAAATTGTTGTTTGCCTGCTTCAGGTCAATCAAGCTTCAGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGGAAGTTCTTCTTTTGGATGCAGGTCAGCATCTCTGTATTACTTTTTGTTCTTTTAGAGAGTTTATTTATATTCTAATATTTTCACGATTCTGACTGCGTTGGACAAATTGTAACCAGGAGCCCAAAGCTGAAGATGATCAGCAGTTGTGCATCTCTGTTAATGACTACATTAATCGGCCACTGGGTACTTCCTAACTGTTATATTTGTTCAAGTATCTGCTGGATGAAGCTTGTAGTAATAACTTCCTAACCAATTGTGCTGGTTTAAGTGCAGGCTTGTATTTGTGATTTTCTTTTACATGCTTGCTTTACGTGCATACGTTCACATAACACGCTTATATTACTGAAACAACTGTTTACCTTTCCAAGGTTTCTTAATCTTGTAATGATTATCATTAATATATATGAACCTAAATAAACATGCAAAAGGAAAAGAAACCACATAAATATTGTGGAGATTATCTTTCACTGACAGCCGTCCTCGTTGCATATGGAGTGTGAAATTTTAATTCTGGCTATCCAAAGGAAAGCTTTGGATAGTCAGTATCGAGATAGATTGGCTCATTTGAAACTGCTCGTAGTTGTCCATCCTCTCAAAGATTTTCATAGATTACTCCACTCAAATCTCTTGATTTTGGCACACTTTTATTATTTTGTACTGATATTAGTTTTGGCACACATAGATTACTCCACTCAAATCTCAAAGATTTGGCACTCAAATCCTTTGTCTCACCTGTTTTTACTCTTTATATAACTTTCTCGTATTTTGAGCATTATTATCATTAATAAAGAAGTTCGTTTCCATTTCAAAAAGAAATATTAATGCTGCCATTAAAATGACGTACTTGTTTACTTTAATCAAGTTCATCCCATGATGAAACTGGAACCTAGTGGCACGCTTGCTGAATATTTTTTtAATCATGCCGATTTAATGGTTTGGTCTTGAGTTTTGACTGCAGTAGATTACGGAGGAGCTGCTTTATGCTTTGTTGGCTCACCCCATTACCTTTATTTTTGTTTATGTTGTTTCAGAGTTTCTTGAGGAAGAAGAACCTGTTGCTTCCACTCCAATGCACGTTTCAGAAGGCACAGTCGAAGAAAACATCCCATCGAGGTATAGTGAGGACCCTCCTTTTTTGGTTtAATTGAACTTTTCTAAAACCCTTTGGATGCTGCAAATAGTTTTTCTTTGGCTTGATACTACCTAGCTGCACGTTCAAGTACAAACATAGCACAGTTGAAGAAAAATATCCCATCAAATTATTGCAATGATCCGCATTTCTTTGTTGACCCTTTTGATTTCAAATGGTTTGGGTGGTACTAGCCCTAGTTGCACCTTCGAATGGTTTTTAAGTGTTCAAAAAAATAATTTAAATTTTTTGATAGAGGAAGCTTTTCCAAAAACAGTTTTCTACTAATGGGAAATGGTTGCCTGATCTGGTGGGATTCAATTGAAATCTAACTTCTAGTGACAGTACTCGGTGGAAAGATTGAGTTTGACTTTTTGAGAGTACTGTGTTTGGGTAAAGTATTTTTTtAATGAGCACTTAGGAAGCTTTAATGAAACGGTTCCTATAGCTGCTTGATTCGGCAACTATGTAATGTGAAAAAATTTTAAATTTGAAATGCATTTGATCCATTGAAAGCACCTGTCATCAATTCCTAAACTCATAATCTTCACATAACCTCTTCTTAAAAAAGAGTAATACCCCCATTTAATCACATATTTTAAAATAATTCATGTGCCAAACTGTGATTGGACTATTGTCCCTTTGGGGGGACATTTGATTAAGTTGGAACTGTGATTGAACTATTGGTTGGGGGGCACGAAGATGAGTACAACCTGAAAGCACCCGAACATTTTtCTTAGAATAAATGTCATTGTTAAAATGCAGATGCACTGAGAAAGAAACAAAGTATCAAGAAACATTTATCCCATTATTGCTGCATTTTGCCAACAAAAGCTTTTATCTCAACTGGCATCTGCATCTTTGTTCGAAAAAACAAAGAAGTATCAGAAAATACTACAATCTCTTAGTTTTTTCAGAAGCTAATTAAAATGACTAATGAGTTGGAACAATATTTATTGCTTAGGGACTATTGTTTTCAGAAATAATGTTGGTTTTGCTTGGCAAAAGGTTACTGTACAAAATTTTTCCTCCTGTTTACTTGGTTGGATATTTTCACCTGCTGTGTCTTCCTTTTCCTTTCTTCCCCCATTAGCTAAATTTATGATAGTAATTTTTTATGTCATGACACTGAAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGGATTTTAAGTAACATCGAGCCATCTGGTATGTCGTTCCCCTCAAACATGTATTGATTCTCTTTGTTCATTTTGATAACTCCAGAATCTAATAATTTTTGCTGCTTTTTTAAACTCAGCAGATATTGATGTCGATCCAGATGCAGGTAATATTTCCATACGAAAATGCTCACATTTTTTGTATCAGATATGTAGTAGTATTTATCTAGGAGAATTTCTCTTCTTCACAGAAATCCTTTTTtGTTTACATTGTAAATATTCAACTAAATCCTGTTTTAGTTAAGAAAAATATTTCATTAATAAATAAAATTCACAAGACCAAAGCCGCATAATTAAATGAGTTTTTTCCATTGGTATAAATCTAAGAATGGTCAAATAAGACTCTATAGAAGTATCTACCAGAAAGACCACAATGAGATTCAAATGCCTATTGGGAGAGAAGAAAAAAAGATGACCACAATGCATGTAGCTGCAGAAACTCAAATTGTATCTTTTTtCCCTTCACTATCCACTCCTTAAAAAACTGTTCTCCTCTCTTGTCAAGTCTCCTGAGTGAAACTAATGCCATTCAACTTTAATCAGAAAATCTTAGCCTTAATATATAAAATGAACATTTCCGTACAAATTTGTAGCTTAATGCTTACACTTCCTTGATGATGTAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCAGTGCTGGAAACGTTACCATTGGAACAGAGTTTAGCATCATATTTGCCGGAGGCATGTACCATTTTGGTATTTGATGATCCCTTGTGATATGCTTTTTTTTTtttCATAATAATTGTGTTCGATTTCAGGGTCCATGGACTCCTGAGGATATATTGGAGCTGTTACAAAGCCCGCCCTTCCGTCAACAAGTAGATTCATTTACTTATGTAATATTCTAAACACTGAATTTTGGTTTCTTATACAATCAATAATTTGACGCTTCAAATTTTCTGATCCGATCTCATGTTTTTCCTAGGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGAATAGACCCGAGCAAATGTAAGTAGATTTTGCTTTATAAAGGCCTTTTGGTTTTtCGGTTGCTAATTGCTATGTCTGGGTGTCCTGAAGGTCCACTCGTGTCTTCTTGGGGATCGTTAGTAATAGTGAACTTGAGGGGTGTCATTAGAAGGTTGAAAATGAATGCAATAGGTTTAGTAATAGTGAACTGTAGGGTCTCTTTTGTATGCAAATGAATGCAATAGGTTTGGTGAAATTTTGTTTTTTTTtAAGACTGTTTTTGGATCATGTAAGACTAGAAATTTAAACTTTATATTTGATATTTGGAAGATGAAGAATTACACTCCATCGACAAAAAAaTACTTTTTCGTGTTATAAGCTTTTTTTTttCTTAAAATAAAATAGCCGTAACATGATATATTTTAATTAATATAGTGCTGTAAAATATAATTTAAAAAAAAAaaCACAAAATGTGTTAATAAATTCATCAATAACAATTTAGATTGAACTAATTGGTAACTTTGACTCTATTATTGTTTTTGAACATATAAATATTGCTAAATATACTTTGAAAAACTTTTTGTTTGTTGGAGTCAGTCACGGGATGGGTGAAGCCTTCTGAGATATCCCAAGTTCTAGTTTGTCTTTACGCACACGACTTTACTTGAACAGAATCTGTTCTAGAAGTTGTAGAACTGTGTCCTCGAGTTCTAACAAGAAATAGTGATACTGATGCATTTACAATCTTGGTTTTCAGTCCTATTCAGTCTGCTCTAAAATATGTATGCTGACATTTAAAGATTCTCTGGTTTCTTGCAGACAAATTTACGGTATTGTCTTTTCTTGATGCCCTTGAGGATTCTGTTTCAAAAACGTCAAGTTCGGAGCTGGAGCAGGATAATAAGGATGTAAGATCCCAATCCTTCAACCGTAGTGACTCGATGGATGAATCATAGTAAGAAGATATTCTAATTCTGTGTTTGCTAATCAGTTACCAATCTCATTGTTTTTTATTGGCAAAGAGAAGGTTGCTTGACATTTCTTGTATACCTTAGAGAGGAAGAACTGGAATTGCTTGAGTAACGAAAAGTGCGGA

mRNA sequence

AAAACGAGAAGGAAATAAGAGAATAAATATCTCAATCTACAAATTCAGTGCTCTCTTCCTCTTCGGGTTCCCATTTTCCAACTACTTTCTCTATCGATTTCTTGTTCTCTTGTTGTTGGAAGTTGAATTGAATAAGTGAAGATATGGACTCGTCGTCTACAGAGGCTGTTCCAGAAATGCAGGAAATACTTCTGGAGTTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAAAGGGTTGTACCCGATACACGCAAAGGACTTGTTCGTATTGGAAGGGGTGAGGAGGGATTGCTGCACTTTCAATGGATTGATCGGACGCAAAATGTCATTGAAGATGATCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTCAATCAAGCTTCAGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGGAAGTTCTTCTTTTGGATGCAGGAGCCCAAAGCTGAAGATGATCAGCAGTTGTGCATCTCTGTTAATGACTACATTAATCGGCCACTGGAGTTTCTTGAGGAAGAAGAACCTGTTGCTTCCACTCCAATGCACGTTTCAGAAGGCACAGTCGAAGAAAACATCCCATCGAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGGATTTTAAGTAACATCGAGCCATCTGCAGATATTGATGTCGATCCAGATGCAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCAGTGCTGGAAACGTTACCATTGGAACAGAGTTTAGCATCATATTTGCCGGAGGGTCCATGGACTCCTGAGGATATATTGGAGCTGTTACAAAGCCCGCCCTTCCGTCAACAAGTAGATTCATTTACTTATGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGAATAGACCCGAGCAAATACAAATTTACGGTATTGTCTTTTCTTGATGCCCTTGAGGATTCTGTTTCAAAAACGTCAAGTTCGGAGCTGGAGCAGGATAATAAGGATGTAAGATCCCAATCCTTCAACCGTAGTGACTCGATGGATGAATCATAAGAGGAAGAACTGGAATTGCTTGAGTAACGAAAAGTGCGGA

Coding sequence (CDS)

ATGGACTCGTCGTCTACAGAGGCTGTTCCAGAAATGCAGGAAATACTTCTGGAGTTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAAAGGGTTGTACCCGATACACGCAAAGGACTTGTTCGTATTGGAAGGGGTGAGGAGGGATTGCTGCACTTTCAATGGATTGATCGGACGCAAAATGTCATTGAAGATGATCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTCAATCAAGCTTCAGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGGAAGTTCTTCTTTTGGATGCAGGAGCCCAAAGCTGAAGATGATCAGCAGTTGTGCATCTCTGTTAATGACTACATTAATCGGCCACTGGAGTTTCTTGAGGAAGAAGAACCTGTTGCTTCCACTCCAATGCACGTTTCAGAAGGCACAGTCGAAGAAAACATCCCATCGAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGGATTTTAAGTAACATCGAGCCATCTGCAGATATTGATGTCGATCCAGATGCAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCAGTGCTGGAAACGTTACCATTGGAACAGAGTTTAGCATCATATTTGCCGGAGGGTCCATGGACTCCTGAGGATATATTGGAGCTGTTACAAAGCCCGCCCTTCCGTCAACAAGTAGATTCATTTACTTATGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGAATAGACCCGAGCAAATACAAATTTACGGTATTGTCTTTTCTTGATGCCCTTGAGGATTCTGTTTCAAAAACGTCAAGTTCGGAGCTGGAGCAGGATAATAAGGATGTAAGATCCCAATCCTTCAACCGTAGTGACTCGATGGATGAATCATAA

Protein sequence

MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSMDES*
BLAST of Cucsa.178980 vs. Swiss-Prot
Match: RPN13_ARATH (26S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana GN=RPN13 PE=1 SV=2)

HSP 1 Score: 361.7 bits (927), Expect = 7.9e-99
Identity = 189/299 (63.21%), Postives = 224/299 (74.92%), Query Frame = 1

Query: 4   SSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIE 63
           SS+EA P MQEI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQW+DR QN +E
Sbjct: 2   SSSEAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVE 61

Query: 64  DDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP 123
           DDQIVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC SVN Y+N+P
Sbjct: 62  DDQIVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQP 121

Query: 124 LEFLEEEEPVASTPMHVSEGTVEENIPS-----------------SSSLRPVKLEDLQRI 183
           LEF   EE +A+      E   E+N  S                 +SS  PVKL DLQRI
Sbjct: 122 LEF-PGEEGLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRI 181

Query: 184 LSNIEPS-ADIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILEL 243
           L+N+      I  D D G  LGD+LKP+LIMP+LE LP+++ L+S+LPEG    EDILEL
Sbjct: 182 LNNLSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILEL 241

Query: 244 LQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQ 285
           LQSPPFRQQVD+FTYVLRTGQIDL+QFGIDPSKYKFTV SFL+ALEDSVS  S   +++
Sbjct: 242 LQSPPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQSRDAMDE 299

BLAST of Cucsa.178980 vs. Swiss-Prot
Match: ADRM1_XENTR (Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis GN=adrm1 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.9e-29
Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 1

Query: 16  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDEAVF 75
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 22  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVEDDLIIFPDDCEF 81

Query: 76  EKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP 124
           ++V+Q  +GRVY+LKFK   ++ FFWMQEPK + D++ C  VN+Y+N P
Sbjct: 82  KRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKVNEYLNNP 130

BLAST of Cucsa.178980 vs. Swiss-Prot
Match: ADM1A_XENLA (Proteasomal ubiquitin receptor ADRM1-A OS=Xenopus laevis GN=adrm1-a PE=2 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 8.6e-29
Identity = 57/109 (52.29%), Postives = 79/109 (72.48%), Query Frame = 1

Query: 16  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDEAVF 75
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 22  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVEDDLIIFPDDCEF 81

Query: 76  EKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP 124
           ++V+Q  +GRVY+LKFK   ++ FFWMQEPK + D++ C  +N+Y+N P
Sbjct: 82  KRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKLNEYLNNP 130

BLAST of Cucsa.178980 vs. Swiss-Prot
Match: ADRM1_DANRE (Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio GN=adrm1b PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.6e-29
Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = 1

Query: 16  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDEAVF 75
           L+EFRAGKM  +G  V PD RKG V I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 22  LVEFRAGKMTLKGSTVTPDKRKGTVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 81

Query: 76  EKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP 124
           ++VNQ  +GRVY+LKFK   ++ FFWMQEPK + D + C  VN+Y+N P
Sbjct: 82  KRVNQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDDEYCRKVNEYLNNP 130

BLAST of Cucsa.178980 vs. Swiss-Prot
Match: ADRM1_BOVIN (Proteasomal ubiquitin receptor ADRM1 OS=Bos taurus GN=ADRM1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.6e-29
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = 1

Query: 16  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIEDDQIVFPDEAVF 75
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 23  LVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 82

Query: 76  EKVNQA-SGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP 124
           ++V Q  SGRVY+LKFK   ++ FFWMQEPK + D++ C  VN+Y+N P
Sbjct: 83  KRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNP 131

BLAST of Cucsa.178980 vs. TrEMBL
Match: A0A0A0LKE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070250 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 2.3e-161
Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 1

Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN
Sbjct: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDV 290
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKD+
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDL 289

BLAST of Cucsa.178980 vs. TrEMBL
Match: M5XDA5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008705mg PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.3e-127
Identity = 236/322 (73.29%), Postives = 266/322 (82.61%), Query Frame = 1

Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           M SSS  A+P+MQEI+LEFRAGKM FEGK+V PDTRKGLVRI +G+EGL+HFQW+DR+QN
Sbjct: 1   MGSSSNAAIPQMQEIMLEFRAGKMVFEGKKVAPDTRKGLVRIAKGDEGLVHFQWLDRSQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           V+EDDQI+FPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAE+D  LC SVN Y+
Sbjct: 61  VVEDDQIIFPDEAVFEKVNQASGRVYLLKFNTDDRKFFFWMQEPKAENDSHLCSSVNYYL 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPS------------------SSSLRPVKLED 180
           NRPLEFL+EE P AS P+ VSE  VE++I S                  +SS  PVKLED
Sbjct: 121 NRPLEFLDEEGPDASVPLQVSEDVVEDDISSRAGILVEPNFGAEVSSDVTSSSGPVKLED 180

Query: 181 LQRILSNIEPSADIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDI 240
           LQRILSNI+P AD  +DPD G  LGD+LKPDLIMP++ETL LEQ L SYLPEG W+PEDI
Sbjct: 181 LQRILSNIDP-ADTALDPDEGLSLGDILKPDLIMPLIETLQLEQRLESYLPEGQWSPEDI 240

Query: 241 LELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTS-SSE 300
           LELLQSPPFRQQ+DSF YVLRTGQIDLSQFG+DPSKYKFTVLSFL+ALEDSVSK S S E
Sbjct: 241 LELLQSPPFRQQMDSFAYVLRTGQIDLSQFGVDPSKYKFTVLSFLEALEDSVSKASESDE 300

Query: 301 LEQDNKDVRSQSFNRSDSMDES 304
             QDNKD+RS+S NR+D MDES
Sbjct: 301 SRQDNKDLRSESCNRNDPMDES 321

BLAST of Cucsa.178980 vs. TrEMBL
Match: A0A067FEZ5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020703mg PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 5.9e-125
Identity = 236/322 (73.29%), Postives = 263/322 (81.68%), Query Frame = 1

Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           M SSST A P MQEILLEFRAGKM F+GK+VVPD+RKGLVRI RGE GL+HFQW+DRT+N
Sbjct: 1   MGSSSTAASPAMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           V+EDDQIVFP EAVFEKVNQASGRVY+LKF TDDRKFF WMQEPKAE+D QLC SVN +I
Sbjct: 61  VVEDDQIVFPHEAVFEKVNQASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPS------------------SSSLRPVKLED 180
           NRPL F+ EEE  AS P+ VSE  VE+++ S                  +SS  PVKLED
Sbjct: 121 NRPLVFVNEEELDASVPLQVSEDMVEDDVSSRAGNLVVPNLGGEAISDVTSSSGPVKLED 180

Query: 181 LQRILSNIEPSADIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDI 240
           LQRI SNI P ADI  DPD G GLGD+LKPDLIMP++ETLPLEQ LA YLPEG WTPE++
Sbjct: 181 LQRIFSNIGP-ADITEDPDGGLGLGDILKPDLIMPLIETLPLEQRLAPYLPEGQWTPEEL 240

Query: 241 LELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTS-SSE 300
           LELLQSPPFRQQVDSFTYVL+TGQIDLSQFG+DPSKYKFTVLSFL+ALEDSVSK S S E
Sbjct: 241 LELLQSPPFRQQVDSFTYVLKTGQIDLSQFGVDPSKYKFTVLSFLEALEDSVSKLSESEE 300

Query: 301 LEQDNKDVRSQSFNRSDSMDES 304
             QD+K++ SQS NRSDSMDES
Sbjct: 301 SRQDDKNLMSQSCNRSDSMDES 321

BLAST of Cucsa.178980 vs. TrEMBL
Match: V4UQ41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008923mg PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 5.9e-125
Identity = 236/322 (73.29%), Postives = 263/322 (81.68%), Query Frame = 1

Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           M SSST A P MQEILLEFRAGKM F+GK+VVPD+RKGLVRI RGE GL+HFQW+DRT+N
Sbjct: 1   MGSSSTAASPAMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           V+EDDQIVFP EAVFEKVNQASGRVY+LKF TDDRKFF WMQEPKAE+D QLC SVN +I
Sbjct: 61  VVEDDQIVFPHEAVFEKVNQASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPS------------------SSSLRPVKLED 180
           NRPL F+ EEE  AS P+ VSE  VE+++ S                  +SS  PVKLED
Sbjct: 121 NRPLVFVNEEELDASVPLQVSEDMVEDDVSSRAGNLVVPNLGGEAISDVTSSSGPVKLED 180

Query: 181 LQRILSNIEPSADIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDI 240
           LQRI SNI P ADI  DPD G GLGD+LKPDLIMP++ETLPLEQ LA YLPEG WTPE++
Sbjct: 181 LQRIFSNIGP-ADITEDPDGGLGLGDILKPDLIMPLIETLPLEQRLAPYLPEGQWTPEEL 240

Query: 241 LELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTS-SSE 300
           LELLQSPPFRQQVDSFTYVL+TGQIDLSQFG+DPSKYKFTVLSFL+ALEDSVSK S S E
Sbjct: 241 LELLQSPPFRQQVDSFTYVLKTGQIDLSQFGVDPSKYKFTVLSFLEALEDSVSKLSESEE 300

Query: 301 LEQDNKDVRSQSFNRSDSMDES 304
             QD+K++ SQS NRSDSMDES
Sbjct: 301 SRQDDKNLMSQSCNRSDSMDES 321

BLAST of Cucsa.178980 vs. TrEMBL
Match: A0A151TKG9_CAJCA (Proteasomal ubiquitin receptor ADRM1 OS=Cajanus cajan GN=KK1_023896 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 5.0e-124
Identity = 232/321 (72.27%), Postives = 257/321 (80.06%), Query Frame = 1

Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           M SSS +A P +QE++LEFRAGKM  EGKRVVPDTRKGLVRI RGEEGL+HFQW+DRTQN
Sbjct: 1   MSSSSVDAFPAVQEVMLEFRAGKMLLEGKRVVPDTRKGLVRIARGEEGLVHFQWLDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           V+EDDQI+FP+EA+FEKVNQ SGRVY+LKF +DDRKFFFWMQE  A+ D QLC SVNDYI
Sbjct: 61  VVEDDQIIFPNEAIFEKVNQTSGRVYILKFNSDDRKFFFWMQESNADGDSQLCSSVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSS-----------------SSLRPVKLEDL 180
           NRPLE + EEEP  S P+ VSE   E++I S                  +S  PVKL DL
Sbjct: 121 NRPLELIGEEEPDGSLPLQVSEDMAEDDISSRAANLGVPNLGVEATSDVTSSGPVKLADL 180

Query: 181 QRILSNIEPSADIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDIL 240
           QRILSNI P AD  VDPD G GLGD+ KPDLIMP++ETLPLEQ LA YLPEG WTPE+IL
Sbjct: 181 QRILSNIGP-ADNIVDPDGGLGLGDIFKPDLIMPLMETLPLEQRLAPYLPEGKWTPEEIL 240

Query: 241 ELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKT-SSSEL 300
           ELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFL+ALEDSVSKT  S E 
Sbjct: 241 ELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKTVDSEEA 300

Query: 301 EQDNKDVRSQSFNRSDSMDES 304
            QD++DVRSQS N  D MDES
Sbjct: 301 RQDDQDVRSQSCNHQDPMDES 320

BLAST of Cucsa.178980 vs. TAIR10
Match: AT2G26590.1 (AT2G26590.1 regulatory particle non-ATPase 13)

HSP 1 Score: 361.7 bits (927), Expect = 4.5e-100
Identity = 189/299 (63.21%), Postives = 224/299 (74.92%), Query Frame = 1

Query: 4   SSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQNVIE 63
           SS+EA P MQEI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQW+DR QN +E
Sbjct: 2   SSSEAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVE 61

Query: 64  DDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRP 123
           DDQIVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC SVN Y+N+P
Sbjct: 62  DDQIVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQP 121

Query: 124 LEFLEEEEPVASTPMHVSEGTVEENIPS-----------------SSSLRPVKLEDLQRI 183
           LEF   EE +A+      E   E+N  S                 +SS  PVKL DLQRI
Sbjct: 122 LEF-PGEEGLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRI 181

Query: 184 LSNIEPS-ADIDVDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILEL 243
           L+N+      I  D D G  LGD+LKP+LIMP+LE LP+++ L+S+LPEG    EDILEL
Sbjct: 182 LNNLSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILEL 241

Query: 244 LQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQ 285
           LQSPPFRQQVD+FTYVLRTGQIDL+QFGIDPSKYKFTV SFL+ALEDSVS  S   +++
Sbjct: 242 LQSPPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQSRDAMDE 299

BLAST of Cucsa.178980 vs. NCBI nr
Match: gi|449470303|ref|XP_004152857.1| (PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis sativus])

HSP 1 Score: 604.0 bits (1556), Expect = 1.5e-169
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1

Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN
Sbjct: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300

Query: 301 DES 304
           DES
Sbjct: 301 DES 303

BLAST of Cucsa.178980 vs. NCBI nr
Match: gi|778667698|ref|XP_011648975.1| (PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis sativus])

HSP 1 Score: 597.8 bits (1540), Expect = 1.0e-167
Identity = 302/303 (99.67%), Postives = 302/303 (99.67%), Query Frame = 1

Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN
Sbjct: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPS DIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPS-DIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300

Query: 301 DES 304
           DES
Sbjct: 301 DES 302

BLAST of Cucsa.178980 vs. NCBI nr
Match: gi|659069557|ref|XP_008450629.1| (PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis melo])

HSP 1 Score: 596.7 bits (1537), Expect = 2.3e-167
Identity = 299/303 (98.68%), Postives = 300/303 (99.01%), Query Frame = 1

Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSS EAVP MQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQW+DRTQN
Sbjct: 1   MDSSSIEAVPAMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEEN PSSSSLRPVKLEDLQRILSNIEPSADIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300

Query: 301 DES 304
           DES
Sbjct: 301 DES 303

BLAST of Cucsa.178980 vs. NCBI nr
Match: gi|659069561|ref|XP_008450644.1| (PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis melo])

HSP 1 Score: 590.5 bits (1521), Expect = 1.7e-165
Identity = 298/303 (98.35%), Postives = 299/303 (98.68%), Query Frame = 1

Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSS EAVP MQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQW+DRTQN
Sbjct: 1   MDSSSIEAVPAMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEEN PSSSSLRPVKLEDLQRILSNIEPS DIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPS-DIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSDSM 300

Query: 301 DES 304
           DES
Sbjct: 301 DES 302

BLAST of Cucsa.178980 vs. NCBI nr
Match: gi|700206088|gb|KGN61207.1| (hypothetical protein Csa_2G070250 [Cucumis sativus])

HSP 1 Score: 576.2 bits (1484), Expect = 3.3e-161
Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 1

Query: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60
           MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN
Sbjct: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60

Query: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120
           VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI
Sbjct: 61  VIEDDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYI 120

Query: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180
           NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP
Sbjct: 121 NRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADIDVDP 180

Query: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240
           DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY
Sbjct: 181 DAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSFTY 240

Query: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDV 290
           VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKD+
Sbjct: 241 VLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDL 289

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RPN13_ARATH7.9e-9963.2126S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana GN=RPN13 PE=1 SV... [more]
ADRM1_XENTR3.9e-2953.21Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis GN=adrm1 PE=2 SV=1[more]
ADM1A_XENLA8.6e-2952.29Proteasomal ubiquitin receptor ADRM1-A OS=Xenopus laevis GN=adrm1-a PE=2 SV=2[more]
ADRM1_DANRE8.6e-2953.21Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio GN=adrm1b PE=1 SV=1[more]
ADRM1_BOVIN8.6e-2954.13Proteasomal ubiquitin receptor ADRM1 OS=Bos taurus GN=ADRM1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LKE1_CUCSA2.3e-16199.65Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070250 PE=4 SV=1[more]
M5XDA5_PRUPE1.3e-12773.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008705mg PE=4 SV=1[more]
A0A067FEZ5_CITSI5.9e-12573.29Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020703mg PE=4 SV=1[more]
V4UQ41_9ROSI5.9e-12573.29Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008923mg PE=4 SV=1[more]
A0A151TKG9_CAJCA5.0e-12472.27Proteasomal ubiquitin receptor ADRM1 OS=Cajanus cajan GN=KK1_023896 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G26590.14.5e-10063.21 regulatory particle non-ATPase 13[more]
Match NameE-valueIdentityDescription
gi|449470303|ref|XP_004152857.1|1.5e-169100.00PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis sativus][more]
gi|778667698|ref|XP_011648975.1|1.0e-16799.67PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis sativus][more]
gi|659069557|ref|XP_008450629.1|2.3e-16798.68PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X1 [Cucumis melo][more]
gi|659069561|ref|XP_008450644.1|1.7e-16598.35PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis melo][more]
gi|700206088|gb|KGN61207.1|3.3e-16199.65hypothetical protein Csa_2G070250 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006773Rpn13/ADRM1
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005737cytoplasm
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.178980.1Cucsa.178980.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR00677326S proteasome complex ubiquitin receptor, subunit Rpn13PANTHERPTHR12225ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEINcoord: 1..303
score: 3.6E
IPR00677326S proteasome complex ubiquitin receptor, subunit Rpn13PFAMPF04683Proteasom_Rpn13coord: 22..103
score: 2.9
NoneNo IPR availablePANTHERPTHR12225:SF0PROTEASOMAL UBIQUITIN RECEPTOR ADRM1coord: 1..303
score: 3.6E