Carg22673 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22673
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Regulatory particle non-ATPase 13
Location	Cucurbita_argyrosperma_scaffold_148 : 440639 .. 453116 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAAAACACCGCGGCTTTCGGCTCCGCATATCAAAAAAAGAAGGAAAGGCTCCCTCTGCAATTTCAGTGCTTTTCTCCTCTTCGCTTCGGATTCCCATTTTCCCACAACTCTCTGAATCGATTTCCTGGTATGCGCCGCATAATTCATCTTCTTCCATCTGTGCTCAATCGTTCTTTTCACTATTCTTGATGCCAATCTTTGATTCCAACTCCCGAAAGGGTTTTCAAGTATTCTAATACCCGCGAGGTTTAGTTGATTCGATATGTGTAGTTTCGTTTCGGGAAACTCTATTGGTTTTGTGTGTTTTCTTGATCGGATTACTCGTTTTGATGCTTCTCCCTCTTTTTCTTTTGCTTTGTGGTAGTTTTCTTGCTCTGTTGGAAGGTGAATCGACTAAGTGAAGATATGGACTCGTCGTCTACGGAGGCCGTTCCGGTAATGCAGGTAAATTGTGTAGGCTTCTTAGCCGCTGTATTGTTCTGTTTACCTACGTATTGCTATCTATACATTGATTCATTTTGCGAGTCTATAGTTGGGAGGGGCGGGAGGTAGGGAAGTGGAGAGAGATTGAGCAGGGAATCTATGTACTATGTTATCCCGCTGCATGTTTGAGTTTTATACAAAAAGTTCCGGTTTGATCATTGGAGCTAATTTTTCTCTATTAACCTCTTTGATCGAAAACGTCTTTATTGAGGTAATTGATGGAACAGACGCTGCAAAAAATGAAAAAAACAGTGGGAGTTCGAGTCCCCAAGAAATTAAACGCCATAAACGATGTACTTGCAACGAAAACCCCTGTGAAGTAATTCCTATCAAGGAATTTTGGTGGCGTTAGGGAAAGCATGTTCTGGGCGGCTCAAGGACTATCACTATTATCATAAAGTTGTATTTTTATAGTGAAGTTTTAGCTTGTGGTATAATATTCTGTTGTAGTTACTCTTCTTCATAAGGGTTTTGTTAGGAAGATGAAAAAACAAAGTAAAATAACCAACCCACATAAAAGAAGGGCTCACTCAAAATGTGGAGAACAACAATCATAACAAAGGATAGCTGTGAATTCTTTAGGTCCTTCCAAATTTTGTCGTCTTCCCATGAACTACCTCTCCCCAAAAACATTCTCCCATACCTTCCTAGTCAGACGAACCATAAAATTGCAAAGGAATTAGCCCGCTACAGATCATGACCCATTTCTTTAAAATGGAGCTGAAAGACAGCCTCCTTTTGTGCCTCCAAAATGGTTAGCCTATTTGCTTAGGCCAAATTGAAACCCTTCCAAAGACACTTCCATATTGGGTGGAAAAAAGGTATACCAACAAATGAATTTAGAGAATGATTTAGATCCTTGTAATCATACTAAAAAAGAAGGCATCAATTTGGTCCTAAAACTGTTTCGGTCAAAAAAAAGAAAAAAAAAAAAAGGCGTAAAAGATGAGAGGAGTCTATCAACAAGACATCAATGTTTATTAACCCTTTCCCAATGCAACTAACCAAGTGAAAAACCCTTTTTTTTTTTTTTTGGGATTTTGAGATCCACTAGGAGGAGAAGAAAGAATGAGACAAGGAAGGGGTAAAACGAGGAGGCTAAGTGGAGAAGAAAAGCCTTGCAAGAAGAGGATCCACATGGCTCAAGGGACCATAAATGTGGGTCTTTGTACGAGGGGAAGGGAAATAGCTACTTGATGAAACAAATAAAGAGAAGCTAATTTCTCAATTTCTCGATCAAGGATGTGGGCCTATGAAATTGAAAGTCGTAAGAAGTTGTTTCAGCTTGAGAACCAAACCAAGACACGCTGCAAACTAGATGTTTTTTTTAGAAATGTACGAGAGTAAAGAGGAAAAAACAAAGAAGAGAGGGTTCAAGACAAAGCTTAGGATCCTTATACAATTGAAATTTGTTGCCTTCTTGATAAGTAGATCATGGTGTTCCAAATGTTCCAACTGGACCTATACACCATCCAAGGCCAAGAAGATTCAGCAAGCATGCATTCTTGATCTACGAAATTGGATAGGCTCGGTTCAACCATTATTTCATGTGTTACAAGCTGATTCGATTGAGGAAGGACAATTTGGAGCTTTGGAAGTGAATATTTGCACGGTTAAAGTAGCGAATGAAGTTGCTATAAATTGCACTTGATTGACAAGTCGTTAGAAAACTTTATTTATTATTTTTAATTTCATAATTTATTGTAGCGGGCAAAAGGGTGGGAGAAGTTACTTGTCAAAGTGATTCTTTTATTTTGTGGAGGTTCAAAAGGGAGTGGGAGTAAAATATGACCACTAGCTTCTTTAGTGGGCATTTGAAGAGTTGAAATTTTCTTTTGTGGAGAGACTATAAATACCACAAGTGACTATGTAAAATGCAGATTTTTTATGAATGAAATTTATCTCTCAAGTCAAGACTTTCACCCTTGTAAATTTAGAGTATCATTTTTGCCCTTTCTAAGTTTCAAGCAATAATTGTGGTAGATTGCATCTGCGCCATTCAATCAAACCTCGATCAAGTTCGATTGTGGAGTGACTCAATTTAGAACAAGGTTTCAAATCTTGCTTTAAAATTTTTGATCTTAGTAATCTAATTCTAGTCTTATCTCTTGGTTGATTTGAATTTTGTATAAGGAGGTGTTAATTTCTTTGATTCATGGGTTCTTGCTTCAACAAAAGCTTGGATCATTGGGATGAGGATTAGGGTTATAGGACTGAAAATGGGAGTGGATGGCGTTCTCACTCAGCACAGATAGAGAGAGAGAGAGAGAATGGTTAAGGAGCTTTATTTTATTGAGAGAGAAGAGAGGAGGAGGAGAAAGAGAAGGGTTTTTGAATGAATTTATTTTTGTGGATTTTGAAAACGAGATTTGCAGAGAAGTCATGAGAGCTCAATCATCCTCCTCTGGTCAGAATAAGAAAGAAAGAAAGACCGTGGCAGAGTAAATGAAGAAGAAGCAGAGGCATTATTCAAAACCTTTACGAACTTTTCCCGTTTTCCCATTTGGCCATTTGGGTCATTTTCCTTTTTTAATTGTAAAGAAACAAGAAAGGAGTTTAATTCTTTTCTTCTTCTTTCCTTTTTTTTTTTTTTACAATCCAAGGTTCCTTGAATCAAAGAAATTAACATCTCCTTATACAAAATTTGGATCGACCAAGAGATAAGGCTAGAATTAGATTACCTCTTAAGATCAAAGATTTAGAAGCAAGACTTGAAATCTTGTTCTAAATTGAGTCACTCCACAATCAAACTTGATCAAGGTTTGATTGAATGACTCGAATGCAATCTATCACAAGAATTGCTTGAAACTTAGAAATTGGAAAAAATGATGCTCAACTTTCTAAGGGTGAAAGTCTTGACTTGAGAGCTAAATTTCATTCATTAAAATCTATCTTTTATATAGTAATTTGTGGGTATTTATAGTCTCTCTAGAAAACAAACTTTCAACTTTTCAAATGCCCACTAAAGAAGTTAATGGCCATAATTTACTCCCACACCCTTTTAAATCTCCACAAAAAAAAGAGTCACTTTGATAAGTAATTTCCCCCACCCTTTTCTACCAGAAATTATGAAATTAAAAATAATAAATAAAGTTTTCTAACCACTTATCAATCAAGTGCAATTCATAACAACTTCATCTGCTACTTCAACCGTGCAAATATTCACTTTTGAAGCTCGAAATCGTCCTTCATCAATCCAATCAGCTTGTAACACATGAAATAATGGTTGAACCGAGTCTATCCAATTTTGTAGATGAAGAATGAACACTTGTTGAATCTTGTTGGCCTTGAATCGTGTAATAGGTCTAGTTGGAACATTTGAAACACCATGATCCTTATCACTTCTCCTATTGCCAAGGTGGTATATACAATCTTTTTCAAGGGTAAAGTATCCAAATTTGTTGAGCAAGAAGAAAAATTCCTTTGTCGATGTTACTGATGCCCACCCCATCATAGTCCAAGGGGGATTGGATTCTTGGTCTTGGCTAATTATCCAAATGGGCAATGCTATTTAACTTTGCTTCCCTACAAAAGCAATCGCTGAAAAGTTTCTCTATAGAATTAGCTACCTTGCTAGGCATGTGAAAGTGGGAAAACGAGGGGATTGCTCATGTTCCTTGGCTAACTTTTTACTGAATAAGTTGGACGTTGAAAGGCCATATGAGTTTTTTTTCCCCTCTCAAATTAGAACAAGCAATAGTGGGGGACCTTGTACTGGAGAAAGATATTATTATCGAGGAGACTTGAGATGGGTTTACTCTTCCAATGGAATTTTGTGGAAAGAGAGATCTTTACGACACGAAATTGGAAGAAAGCCCATTGAGTACTTTCGGTGATATCTGAGTTGGTAGATGTTAGGATGGAATACTTGTCCTCTACTGATATAGTTGATTATCTATTTAATACCCCTTAAGCTTCAAACATGGCCCTTATGAAGGAAGTCTGGTTAACAATTAGGGATAGAAAGACTGTTACGAAGATGTTTAGTATATCATTTGATAGAGGCTTGTCATGGGTTTGGCATGAGGCAGCTAATGTTACTATTTCTAAATTCTTGCGTGGAGATAGATTTAATTTTTGGGAAGATGCGTGGATCGACCAAGTTCCTTTGAGGGTTAGTATTCCCGACCTCTATGCAATGTCAAATAAAAAAAAAAACTTTGATTGTTGGGACAGGGAGAATCAAGCTTGAAACCTAGGCATTAGGAGAGGTTTCCTCGATAGAGAATTAAACAGATGGGTAGTCCTGATACAAAAGCTAAACTCGGTGTGCTTGGGGAATGATGTTGATTGAATACTTTGGACCATGGAGGGATCGGGAAAGTTCTCAAGCAAACTGGCCTTTCAAAAGCTCTTCCGTAATTCTTCTATGGACAATACAGCCTTGACTAGCTTGATTTTGGAGACACAAAAGTTTGAAGAAAATTATGATCTTTCTTTGGTCCTTGGCTTTTAGAAGTCTAAATACGGATGACTGACTGCAAAGGAAGTGTGGAGATTGGTCCCTTATGGTTAAAGGATGGCGAGTTTATTGATCATCTTTTCCTTCATTGTGATTTTGCGTATCTGTCATAGAATTACCTAGTTGGGCTGCTGGGAATATCCTTTGACCTCGCTCAAAAAGTGGATGATTGGCTCATGGAAGGCCTAAATGCTTGGAATTTGCAAAGGAAAACAAAGGTAGTCGGTAGCTGTGCCTTCAGACCACTATTATGGCACTTGTGGAAAGGAAGAAATGCTAGAACCTTCGAAGATAAGCTCTTATGTTATGATTTTCTTCGTACTCATGTACAAAATACGTCCTCTTGGTGGATTACACTACACAGAAAATTATTTGTAATTATAGTTTGTTGAGATCACATATGACTGGCGGCTCTTATGATGTAGTTTTTGCGAGGGGGTTCTCTCTGCCCTTAACCCCTAGGCTGTACTAGCCTTTCTTTGGGATTTATGCCTTTACTGTTTCTTATTAAAAAATGGTTTAAAGGGAAACTGAAGGTGCTTTGTTGAATGCAGTTAAGGCATTGTTGTGACATGAGGATTGAATATTGGAAGGAACAATAGGATTTTTTGAACAAGTTTAGGGGTTAGTAAGTGTTGGTATTCTCTTTTCCTTTCCTTTTCTTTAAAAAAATTATTCCCCCTTTTTAATTAATTCAAACTTGCATGTTTTTTTAAACTCCAATTGACTAGAGTAACTTTATACCTTCTCTTTCGATAAGAAGTGTCTCCGTAAAAAGAAGTAGAAGAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGAAAGGAAGGACGAAGGAATGGGACGAAAAAAAGAAAATTGCTCACATCATAGCTTGGATTAATACCCTCTCTTGGAAATATAATACAATGATTCTGGATACAGTCTATTAGACTTATATATATTTATATTGTCATATTCTTTATTTTGAGCCAACATTTTATTTGTTTCAAACTAACTGATTCTTGTGGCAGGAAATACTTTTGGAATTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAAAGGGTTATGCCTGATACACGTAAAGGACTTGTTCGTATTGGAAGGGTGAGTTTGAATTTTTACATGTTTACATAAATCTTTTTGTTATGTGTTAATTGTGGAATATCCTCGTAGCGGCATTAGCAAAATGTATATTACTCAAAAGAGAGATCTTCATTCAAAAATTTAAGTTGCTGCTCTCTATCTTGATGACATAGAATGCATAATCACCTCTTTTCCCACTGCTTGTTCATGCAAAGGCTGCTGTGTCTGTTGGACATCTTTAATCTTGAAGTGTGCATCTCTTTTCATTCCAGCATTGTCCAGAGCACTTATTTACTGGTCGCCTTTTCAAACGTGGGTTAACTTGGTGGTCATAGAGGGTCAGGTAATAATAAAGGTATATAGGAAATAGGTTCAAGCTGTGGCGGCCACCAACTTAAGATTTAATATCATGACAATTAACTTGGCAACCAAATGTAGTAGGGTCAAGTGGTTATCCCATAAGAATAGTCAAGGTGTGGGCAAGTTGGTCTGAACACTCATGAATATCTAAGTAAAAAATTTCAAAATTTTTTTGGTAATTTTCATGGCTCCTCGTCTCTTTGGGAGGATCAAGTCCTAAGACTTTCTATGATTTGATCCACGTCTTTTGCTACCAAGGTTGTTTGTAATAGACTTTTGGTTTGTGTTTGGTTCAGGTATCAATTCTTTGTTATTTGATAGAGGAGATCACCTTGAGTCTGCCATTTTTAGATTAAGGACATTTGTTTTTATTGAATATTGCTTATTGTGGCAAGCCTACGTTTTTATAGTTTGTGGTTTATATGGTTGGGAAGAAGTTGACAAACTTTTTCAAGTTTAGATGCATTGTAAGAAGACGGGTTTGGTGCATCTTAATGCATCTCTTTGATTTCAGAATTCAGAACCTTTTTTCTTGTAATTTATGTGACTGTCAGTTGGGATCCTTATTTTTTAGGTAATTGTTTTCTTTTTGTTTCCTTCCGTTGGTTTGCCCTTTGTTTTTGTTGACATTCCGCCCCCTAAATTTAAAGAAAGATGGTTTTCTCTCTAAAGAGAAAAAAGAATAGGGAAGGGGAGGTAGAAGCATACTTGTAAGAATAGCTTTCCCCCCTTGTTATACAATAGTCGATCTGTTAAGTTACGCCTTCTAGTTGAACCTAAACCTCCACCAGTTAAAACTAATTTCTCTCTTTGAACCCTGTGTTATCTTTTCTATGTCAGGGTGAGGAGGGATTGCTGCACTTTCAGTGGCTTGACCGAACGCAAAATGTCATTGAAGATGTATCCTGATCACTTGTGTCAATTGTCAATTCTTCGTGTTTGGTTAATGCATATACCTTTCTGTAAACTATTTCCGTTGATTATTAAATTAAGAATGTGTGGTTTTCATCCTAATATTTGATTCACTTGACTTTGAAGGCTTACCCCCACTAGAGAAAAGGACAAAAGATAAAAGACAATCTGAAAAGCTTCATACTTCACGATGAAATATTATGATTTTTTATATATCATAGTTGAATGTTATAGAAAGACAATGAACTAAACTGGCCCATTATTAGGAACGAACTCTTATTAATGTAAGTGGATATTCGGCTGTGACTCTTTCTGCAAGCAGTGGAAATGATTTCTGAGTTAATTTAATTTCGTAATATATTAATTATTTTTTTTTGTGCGTTCTGTCATGGACTGGTTGTTACATTCTGTTGCACAGATGGTTTTTGTTTACTGTTGACAGCATCATCACTCTTTATTAGTATATTTATTAAAGTTGATGTGTCAATGGACGGTGTATTCTTCTTTCCAAACATAAGGCTGGCGCAAAGTAATAAGATCATATTCATTATATCATTGCATTGCACTCTTCTCTATTCCTCAGCTATGACTTTTTTCTGTTGTTACCAGTTTGCTAGCTAGATATTTTTTTATTTTCCTTAATACAAGGTATCAAAGGACCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTGTGTAATACTCTCTCTCTCTCTTTTTTATTTTTTTATTTTCTTAAAGAAGTACTCGTAGCGAAGAAATAGAAAGATCTATATAAAGGGGGAAAGGGGCAGTAAGAGTGGTTTCCAATCAAGCAATAACTGTGAACAAAGAAAATTACCATCCTTGTCTGCAGTTAGATACACAGAGGGATATATTAAAATTTCTTCCATCCCTCTAGTCTCCTCAAAGACCTCCGAGAACACTCCTATAATGAACTTTGTCCCTAACATTTATGCTGAAAAGTTCAAACAACTAGTCTCCCACTTCTATGGTTGCAAGCATTGAGCAGAGAGGCGATCAATATTTTCATTGTTATAAACAAACACACATGCACTGATTGAACTAGGTGGGGTATCTTTGAATCCACTTGTTAGTTAGCATTGAGATTTCTAGAGAACACAATGACCAAACAAAATTTTCAATCTTATTTGGCTCCAAGGTTAAACTTGTAGTTTTTCTCTGCTTCAGGTTAATCAAGCGTCAGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGGAAATTCTTCTTTTGGATGCAGGTCTGATCTGTGATTACTTTTTATCCTTTGAGAGAATTGACTTATATTCTACTATTTTTTGCCATTCTGACCAACGTTAGATAAACTGTAACTAGGAGCCCAAAGCTGAAGATGACCAGCAGTTGTGTATCTCCATTAATGATTACATTAATCGGCCACTGGGTACGTCCTAATTATTGTAGTTGTTTGACTATCTGCTGATTAAAGCTTGCATAATAAATTGTTAACCAGTTATACTGGGTCAAGTGCAGGCTAGTATTTGTGGTTTTCTGTGGCATGCATACATTCACACAAGACACGCTCATATACTGAATGTTCTACCACTTAATTTACTGTGTCCAAAGTGTCTTTATCTTTTAACGATTATTGTTAAGGTATACGAACCAAAATAAACCTGAAAAACGGATAAAGAAACCACATAAGTATATTTTGGAAATTGTCTCATTGACTGGCGTCCTCATTGCATATAGAGAGTCAAATATTAATGCCGACATTAAAATATGGCGTAATAATTTCTTTAGAATGAAGTTCATCCATAATGGAAATTCAATAGCATGTGTGCTGGATTGAATTGTTCGGTTTTGACTGCACAAGATCCCGGACGAGCTGCATATGTTGGCCCACCCCTTTACTTCCATCTTTGTTTTTGTTGCTCAGAGTTCCTTGAGGAAGAACAATCTGTTGCTTCCACTCCTCTGCAAGTTTCAGAAGGCACAGTCGAAGAAAATATCCCATCAAGGTATAAAATTGATCTGCCTCTGTTTCTGGTTTGATTAATTCTTTTTGAAACTCTATTGAGGCTTCAAATGGGTTTTATTTGGGTGGTACTATCCCTGGCTGCACTTTTCAAGCATGACATAGTTGAAAAAAAATATCCCTTTGAAGTATAGCAAAGACCCGCTTTTCTTTAATGATCCTTTTGATTCTTCAAATAACGGTGGTAATGCCAACCTATTTGAATGATCAAAAAATTCATTTTTTTTTTTTTTAAATTGATAGAGATAGATTTCTAATTATGGGAAAAGGGTCATCTGATCTCTGATATTTAGGGATTCAATTGAAATGTAATTTCTAATGATTACTGGGTGGAAAGATCTCTTTTGTGGAAGAAGACTGCGTTTGACTTTTAAGAGTTGTGTTTTTTAGTAGAATACTTTTTCTTTAAGCACTTTAGGAAGAAGTATTAATGAAGCGCATTCATTATATGGACTTTGTTAGGTTAAATGTTCTCTTTGGGCTTTGATGTTGAGGAGTTTTTTAATTATTCCTAAGTCCCATTTTGTTAGATTGGAGCTCCTTTTTAGTCTAAGTGTGTTTTCTTTTGTGGGGCTGATTTTTTTATACCTTTATATTCTTGCATTTTTCCAGTATGAAGAGTCGACTTTTCATAAAAAATAAAAAAAGTATTAGAAACAGTATTTCTTGATTAGTTGGAGCAAATTAAACCCTATTTTTTGAGCCTTGAGAGTGTAGGGCTACGTTTGATTAGAATTTTGGGATGTGTTGTATGAAAGTTCCCCTACTGTATATACTTCATTGGAATATTTTCTCGTCTTTTTGTTGGTTTTCTTTCTCATTAGCTAAAACTTTTGACAATTAATTTTAATGTCATGACATTGAAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGAATTTTAAGCAACATTGAGTCTTCTGGTACACGATTCTACCCTCAAACATGTTCTGATGCCCTTTTTTCCTTTTGATCACTCCAAACGCTAATAATTTTGTGCTGGTTTTGAACTCTGCAGACATTGATGTTGATCCAGATGCAGGTAATAAGTTTCATTTAAAATTTCTTTACATTTCTTGTATCATGTTTACGTGGTAGCACTTATCTTGAAGAATTCTTCCCCTATGCAAATATATATATATATATTCAACCAATTTTTTTTGTCTAGATCCTAAAACTATCTCATTAATAAATAAATTTTTCACGACTCAAGGATACCAAATTATAGGGGATCCTATCCATTGGTATAAATCATATAATGGTCAAAAGAGACTCAAAACTACAAAAGTGTCTATAGGTGAACCACAAATGAGCCAACCTAAGATTAGTAGTTAAGGCATCTCAACTTCTCCTAAAGGGTGTAGGTTCAAATTCCTCCTCCTTAGGAAGGAAGGAAAAAATAATAAATAATGATGACCACAATGTAGCTGCCATGGTTGGGGAGGCGAACAAAGCATTTAAGGGTGGTGTGGAGACCTCTCTTTAGCAAACGTGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATCTGCTAGCAATGGACTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGGGCGATGTGCCAACGAGGAGGCTGAGCCTCAAAGGGGGGTGGACAAGAGGCGGTTTGCCAACAAGGACGCTGGGCCCCAAAGGGGGTGGCTTGGGGGTCCCATATCAATTGGAGAAGGGAACGAGTGCCATGAGGACGCTAGGCTCCGAAGGGGTGGTAAATTATGAGATCCCACATCGGTTGGGGAGGCAAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCCGTAGCAGATGCGTTTTAAAAACCTTGAGGGGAAGCTCGAAAGAGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTTGGGCTGTTATAGTAGTAGCCATAAAAACTCAATTCAATTCGTATTATTATTCCTACCCACACCTTAGGAAATTTTCTCCTTGTTTCCGCCAAGTCTCCTGAATGCATCTAATGGCATTCAACTTCCACCAGAGAACCTTGGCTCTACGTTAGAAAGTTGCCTTAACTCTCTACTTTTCTTGTGTACTCTGTTTCCCTAGATTTATGTTGAACTTCCGTGATATGGATGTAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCATTGTTGGAAACATTGCCATTGGAACAGAGTTTAGCATCGTATTTACCAGAGGTATACACAACTTTGTTATATGATCCTTTGTTATACTTTTATTCATTATTCAATTATATTCTGATTGCAGGGTCCATGGTCTCCTGAGGATATCTTGGAACTGTTACAAAGCCCACCTTTCCGTCAACAAGTAGATTCGTTTACTTACGTACGAATCTAAACCCCGGATTTCGTTTCAAATGATAAATTGGCGATCAAATTTGACAATCTTTACCCCATTTTGTTGGTGTTGATGTTTTTGTAGGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTCGGGATAGACCCGAGCAAATGTAAGTAGATTGTGCTTCGAAAGGCCTCAAGTTTTTTCAATAAATGTCATGTTAAGTGTTTTCTAAAGAAAAAATGAAACTCATGGTAATGTTGAAAAAACGAACACAATTTTTCAAAACCAAATGGTTATCGAACATGACCTTGTTGGTTTGAGTTGGTCGTGGGGGGCTGTGACCATAACACGAGGATCTCAATATTTCGGTTGTGAAGATCCTTTTCTAGCTGTTCTAAAAAGTTGTGATACTTAAACGATTCTCTAATTTCTTGCAGATAAATTTACGGTGTTGTCTTTTCTCGAGGCGCTCGAGGATTCTGTTTCGAAAATGTCGAGTTCTGAGGCGGGGCAAGATGAGAAGGATGTAAGATCTGAATCCAACCTCATGGATGAATCATAGAGTAGGAAGATATTGGGATTCTGTGTTTGCTTATGGGTTACCATTCTCATTGTTTATTATTGGCACAGAAAAAGGTTGTTTTGACAGTTTCTGTACTTTCTTATATACACTTAACACAGAGGAACTTAGATCTCCTTTTGAAGAACACAAAATTGGAATCTTATATATGATACGTGACAATAATCTTAGTTTCATATTCTTAATCTCTA

mRNA sequence

GGAGAAAACACCGCGGCTTTCGGCTCCGCATATCAAAAAAAGAAGGAAAGGCTCCCTCTGCAATTTCAGTGCTTTTCTCCTCTTCGCTTCGGATTCCCATTTTCCCACAACTCTCTGAATCGATTTCCTGTTTTCTTGCTCTGTTGGAAGGTGAATCGACTAAGTGAAGATATGGACTCGTCGTCTACGGAGGCCGTTCCGGTAATGCAGGAAATACTTTTGGAATTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAAAGGGTTATGCCTGATACACGTAAAGGACTTGTTCGTATTGGAAGGGGTGAGGAGGGATTGCTGCACTTTCAGTGGCTTGACCGAACGCAAAATGTCATTGAAGATGTATCAAAGGACCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTTAATCAAGCGTCAGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGGAAATTCTTCTTTTGGATGCAGGAGCCCAAAGCTGAAGATGACCAGCAGTTGTGTATCTCCATTAATGATTACATTAATCGGCCACTGGAGTTCCTTGAGGAAGAACAATCTGTTGCTTCCACTCCTCTGCAAGTTTCAGAAGGCACAGTCGAAGAAAATATCCCATCAAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGAATTTTAAGCAACATTGAGTCTTCTGACATTGATGTTGATCCAGATGCAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCATTGTTGGAAACATTGCCATTGGAACAGAGTTTAGCATCGTATTTACCAGAGGGTCCATGGTCTCCTGAGGATATCTTGGAACTGTTACAAAGCCCACCTTTCCGTCAACAAGTAGATTCGTTTACTTACGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTCGGGATAGACCCGAGCAAATATAAATTTACGGTGTTGTCTTTTCTCGAGGCGCTCGAGGATTCTGTTTCGAAAATGTCGAGTTCTGAGGCGGGGCAAGATGAGAAGGATGTAAGATCTGAATCCAACCTCATGGATGAATCATAGAGTAGGAAGATATTGGGATTCTGTGTTTGCTTATGGGTTACCATTCTCATTGTTTATTATTGGCACAGAAAAAGGTTGTTTTGACAGTTTCTGTACTTTCTTATATACACTTAACACAGAGGAACTTAGATCTCCTTTTGAAGAACACAAAATTGGAATCTTATATATGATACGTGACAATAATCTTAGTTTCATATTCTTAATCTCTA

Coding sequence (CDS)

ATGGACTCGTCGTCTACGGAGGCCGTTCCGGTAATGCAGGAAATACTTTTGGAATTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAAAGGGTTATGCCTGATACACGTAAAGGACTTGTTCGTATTGGAAGGGGTGAGGAGGGATTGCTGCACTTTCAGTGGCTTGACCGAACGCAAAATGTCATTGAAGATGTATCAAAGGACCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTTAATCAAGCGTCAGGAAGAGTTTACTTATTGAAGTTTAAAACAGATGACAGGAAATTCTTCTTTTGGATGCAGGAGCCCAAAGCTGAAGATGACCAGCAGTTGTGTATCTCCATTAATGATTACATTAATCGGCCACTGGAGTTCCTTGAGGAAGAACAATCTGTTGCTTCCACTCCTCTGCAAGTTTCAGAAGGCACAGTCGAAGAAAATATCCCATCAAGCTCCTCACTACGGCCAGTGAAGTTGGAAGACCTGCAAAGAATTTTAAGCAACATTGAGTCTTCTGACATTGATGTTGATCCAGATGCAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCATTGTTGGAAACATTGCCATTGGAACAGAGTTTAGCATCGTATTTACCAGAGGGTCCATGGTCTCCTGAGGATATCTTGGAACTGTTACAAAGCCCACCTTTCCGTCAACAAGTAGATTCGTTTACTTACGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTCGGGATAGACCCGAGCAAATATAAATTTACGGTGTTGTCTTTTCTCGAGGCGCTCGAGGATTCTGTTTCGAAAATGTCGAGTTCTGAGGCGGGGCAAGATGAGAAGGATGTAAGATCTGAATCCAACCTCATGGATGAATCATAG

Protein sequence

MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISINDYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDVDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSESNLMDES

Homology

[Close]

BLAST of Carg22673 vs. NCBI nr
Match: XP_022937753.1 (26S proteasome regulatory subunit RPN13 isoform X2 [Cucurbita moschata] >XP_023538270.1 26S proteasome regulatory subunit RPN13 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 578.9 bits (1491), Expect = 9.7e-162
Identity = 297/301 (98.67%), Postives = 298/301 (99.00%), Query Frame = 0


Query: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60
           MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN
Sbjct: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISIN 120
           VIED   DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCIS+N
Sbjct: 61  VIED---DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVN 120

Query: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDV 180
           DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDV
Sbjct: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDV 180

Query: 181 DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSF 240
           DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSF
Sbjct: 181 DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSF 240

Query: 241 TYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSESNLMDE 300
           TYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSESNLMDE
Sbjct: 241 TYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSESNLMDE 298

Query: 301 S 302
           S
Sbjct: 301 S 298

[Close]

BLAST of Carg22673 vs. NCBI nr
Match: XP_022966078.1 (26S proteasome regulatory subunit RPN13 isoform X2 [Cucurbita maxima])

HSP 1 Score: 577.8 bits (1488), Expect = 2.2e-161
Identity = 296/301 (98.34%), Postives = 298/301 (99.00%), Query Frame = 0


Query: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60
           MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN
Sbjct: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISIN 120
           VIED   DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCIS+N
Sbjct: 61  VIED---DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVN 120

Query: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDV 180
           DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDV
Sbjct: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDV 180

Query: 181 DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSF 240
           DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSF
Sbjct: 181 DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSF 240

Query: 241 TYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSESNLMDE 300
           TYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMS+SEAGQDEKDVRSESNLMDE
Sbjct: 241 TYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEAGQDEKDVRSESNLMDE 298

Query: 301 S 302
           S
Sbjct: 301 S 298

[Close]

BLAST of Carg22673 vs. NCBI nr
Match: XP_022937752.1 (26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita moschata] >XP_023538269.1 26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.3 bits (1479), Expect = 2.4e-160
Identity = 297/302 (98.34%), Postives = 298/302 (98.68%), Query Frame = 0


Query: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60
           MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN
Sbjct: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISIN 120
           VIED   DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCIS+N
Sbjct: 61  VIED---DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVN 120

Query: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESS-DID 180
           DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESS DID
Sbjct: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSADID 180

Query: 181 VDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDS 240
           VDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDS
Sbjct: 181 VDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDS 240

Query: 241 FTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSESNLMD 300
           FTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSESNLMD
Sbjct: 241 FTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSESNLMD 299

Query: 301 ES 302
           ES
Sbjct: 301 ES 299

[Close]

BLAST of Carg22673 vs. NCBI nr
Match: XP_022966077.1 (26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita maxima])

HSP 1 Score: 573.2 bits (1476), Expect = 5.3e-160
Identity = 296/302 (98.01%), Postives = 298/302 (98.68%), Query Frame = 0


Query: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60
           MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN
Sbjct: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISIN 120
           VIED   DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCIS+N
Sbjct: 61  VIED---DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVN 120

Query: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESS-DID 180
           DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESS DID
Sbjct: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSADID 180

Query: 181 VDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDS 240
           VDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDS
Sbjct: 181 VDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDS 240

Query: 241 FTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSESNLMD 300
           FTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMS+SEAGQDEKDVRSESNLMD
Sbjct: 241 FTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEAGQDEKDVRSESNLMD 299

Query: 301 ES 302
           ES
Sbjct: 301 ES 299

[Close]

BLAST of Carg22673 vs. NCBI nr
Match: XP_011648975.1 (PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis sativus])

HSP 1 Score: 542.7 bits (1397), Expect = 7.7e-151
Identity = 279/305 (91.48%), Postives = 289/305 (94.75%), Query Frame = 0


Query: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60
           MDSSSTEAVP MQEILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQW+DRTQN
Sbjct: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60

Query: 61  VIEDVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISIN 120
           VIED   DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCIS+N
Sbjct: 61  VIED---DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVN 120

Query: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDV 180
           DYINRPLEFLEEE+ VASTP+ VSEGTVEENIPSSSSLRPVKLEDLQRILSNIE SDIDV
Sbjct: 121 DYINRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSDIDV 180

Query: 181 DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSF 240
           DPDAGFGLGDLLKPDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQVDSF
Sbjct: 181 DPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSF 240

Query: 241 TYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSE----SN 300
           TYVLRTGQIDLSQFGIDPSKYKFTVLSFL+ALEDSVSK SSSE  QD KDVRS+    S+
Sbjct: 241 TYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSD 300

Query: 301 LMDES 302
            MDES
Sbjct: 301 SMDES 302

[Close]

BLAST of Carg22673 vs. TAIR10
Match: AT2G26590.1 (regulatory particle non-ATPase 13)

HSP 1 Score: 362.1 bits (928), Expect = 3.4e-100
Identity = 190/296 (64.19%), Postives = 224/296 (75.68%), Query Frame = 0


Query: 4   SSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIE 63
           SS+EA PVMQEI+LEFRAGKM  +G RV+PD RKGLVRI RG+EGL+HFQWLDR QN +E
Sbjct: 2   SSSEAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVE 61

Query: 64  DVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISINDYI 123
           D   DQIVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC S+N Y+
Sbjct: 62  D---DQIVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYL 121

Query: 124 NRPLEFLEEEQSVASTPLQVSEGTVEENIPS-----------------SSSLRPVKLEDL 183
           N+PLEF  EE  +A+   +  E   E+N  S                 +SS  PVKL DL
Sbjct: 122 NQPLEFPGEE-GLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADL 181

Query: 184 QRILSNIESSDIDV--DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDI 243
           QRIL+N+    + +  D D G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    EDI
Sbjct: 182 QRILNNLSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDI 241

Query: 244 LELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMS 281
           LELLQSPPFRQQVD+FTYVLRTGQIDL+QFGIDPSKYKFTV SFLEALEDSVS  S
Sbjct: 242 LELLQSPPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQS 293

[Close]

BLAST of Carg22673 vs. Swiss-Prot
Match: sp|O48726|RPN13_ARATH (26S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana OX=3702 GN=RPN13 PE=1 SV=2)

HSP 1 Score: 362.1 bits (928), Expect = 6.1e-99
Identity = 190/296 (64.19%), Postives = 224/296 (75.68%), Query Frame = 0


Query: 4   SSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIE 63
           SS+EA PVMQEI+LEFRAGKM  +G RV+PD RKGLVRI RG+EGL+HFQWLDR QN +E
Sbjct: 2   SSSEAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVE 61

Query: 64  DVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISINDYI 123
           D   DQIVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC S+N Y+
Sbjct: 62  D---DQIVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYL 121

Query: 124 NRPLEFLEEEQSVASTPLQVSEGTVEENIPS-----------------SSSLRPVKLEDL 183
           N+PLEF  EE  +A+   +  E   E+N  S                 +SS  PVKL DL
Sbjct: 122 NQPLEFPGEE-GLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADL 181

Query: 184 QRILSNIESSDIDV--DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDI 243
           QRIL+N+    + +  D D G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    EDI
Sbjct: 182 QRILNNLSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDI 241

Query: 244 LELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMS 281
           LELLQSPPFRQQVD+FTYVLRTGQIDL+QFGIDPSKYKFTV SFLEALEDSVS  S
Sbjct: 242 LELLQSPPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQS 293

[Close]

BLAST of Carg22673 vs. Swiss-Prot
Match: sp|Q6NZ09|ADRM1_DANRE (Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio OX=7955 GN=adrm1b PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-30
Identity = 111/391 (28.39%), Postives = 164/391 (41.94%), Query Frame = 0


Query: 16  LLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDVSKDQIVFPDE 75
           L+EFRAGKM  +G  V PD RKG V I + ++ L+HF W DRT   +ED   D I+FPD+
Sbjct: 22  LVEFRAGKMTLKGSTVTPDKRKGTVYIQQTDDSLIHFCWKDRTSGNVED---DLIIFPDD 81

Query: 76  AVFEKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISINDYINRPL------- 135
             F++VNQ  +GRVY+LKFK   ++ FFWMQEPK + D + C  +N+Y+N P        
Sbjct: 82  CEFKRVNQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDDEYCRKVNEYLNNPPMPGALGS 141

Query: 136 --EFLEEEQSVASTPLQVSEGTVEEN---------------------------------- 195
                 E  ++    LQ   G +  N                                  
Sbjct: 142 GGGGGHELSALGEGGLQSLLGNMSHNQLMQLIGPTGLGGLXXXXXXXXXXXXXXXXXXXX 201

Query: 196 ----------------------------------------------------------IP 255
                                                                       
Sbjct: 202 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 261

Query: 256 SSSSLRPVKLEDLQRILSNIESSDIDVDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASY 292
                 P++L DLQ IL+ +    +  +  +G  L  +L PD++ P+L    ++Q L  Y
Sbjct: 262 XXXXXXPIQLSDLQSILATMNVPAMPTE-GSGVDLASVLTPDVMAPILANPEVQQRLLPY 321

[Close]

BLAST of Carg22673 vs. Swiss-Prot
Match: sp|Q98SH3|ADRM1_CHICK (Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus OX=9031 GN=ADRM1 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-29
Identity = 110/391 (28.13%), Postives = 165/391 (42.20%), Query Frame = 0


Query: 16  LLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDVSKDQIVFPDE 75
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +ED   D I+FPD+
Sbjct: 23  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVED---DLIIFPDD 82

Query: 76  AVFEKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISINDYINRP-------- 135
             F++V Q  +GRVY+LKFK   ++ FFWMQEPK + D++ C  +N+Y+N P        
Sbjct: 83  CEFKRVPQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEHCRKVNEYLNNPPMPGALGG 142

Query: 136 -------LEFLEEEQSVAS----------------TPLQVSEGTVEENIPSSSSL----- 195
                  L  L  E  + S                              P  +SL     
Sbjct: 143 NASGGHELSALGGEGGLQSLLGNXXXXXXXXXXXXXXXXXXXXXXXXXXPGLASLLGSGG 202

Query: 196 ------------------------------------------------------------ 255
                                                                       
Sbjct: 203 FPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 262

Query: 256 RPVKLEDLQRILSNIESSDIDVDPDAG---FGLGDLLKPDLIMPLLETLPLEQSLASYLP 298
           +P++L DLQ IL+      ++V   AG     L  +L P+++ P+L    +++ L  YLP
Sbjct: 263 QPIQLSDLQNILAT-----MNVPSGAGGQQVDLATVLTPEIMAPILANAEVQERLMPYLP 322

[Close]

BLAST of Carg22673 vs. Swiss-Prot
Match: sp|Q6P877|ADRM1_XENTR (Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis OX=8364 GN=adrm1 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.3e-28
Identity = 57/112 (50.89%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 16  LLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDVSKDQIVFPDE 75
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +ED   D I+FPD+
Sbjct: 22  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVED---DLIIFPDD 81

Query: 76  AVFEKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISINDYINRP 127
             F++V+Q  +GRVY+LKFK   ++ FFWMQEPK + D++ C  +N+Y+N P
Sbjct: 82  CEFKRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKVNEYLNNP 130

[Close]

BLAST of Carg22673 vs. Swiss-Prot
Match: sp|Q6GN67|ADM1A_XENLA (Proteasomal ubiquitin receptor ADRM1-A OS=Xenopus laevis OX=8355 GN=adrm1-a PE=2 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 5.6e-28
Identity = 57/112 (50.89%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 16  LLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDVSKDQIVFPDE 75
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +ED   D I+FPD+
Sbjct: 22  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVED---DLIIFPDD 81

Query: 76  AVFEKVNQ-ASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISINDYINRP 127
             F++V+Q  +GRVY+LKFK   ++ FFWMQEPK + D++ C  +N+Y+N P
Sbjct: 82  CEFKRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKLNEYLNNP 130

[Close]

BLAST of Carg22673 vs. TrEMBL
Match: tr|A0A1S3BQP8|A0A1S3BQP8_CUCME (26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492157 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 3.3e-150
Identity = 278/305 (91.15%), Postives = 287/305 (94.10%), Query Frame = 0


Query: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60
           MDSSS EAVP MQEILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQN
Sbjct: 1   MDSSSIEAVPAMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISIN 120
           VIED   DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCIS+N
Sbjct: 61  VIED---DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVN 120

Query: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDV 180
           DYINRPLEFLEEE+ VASTP+ VSEGTVEEN PSSSSLRPVKLEDLQRILSNIE SDIDV
Sbjct: 121 DYINRPLEFLEEEEPVASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSDIDV 180

Query: 181 DPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSF 240
           DPDAGFGLGDLLKPDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQVDSF
Sbjct: 181 DPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDSF 240

Query: 241 TYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSE----SN 300
           TYVLRTGQIDLSQFGIDPSKYKFTVLSFL+ALEDSVSK SSSE  QD KDVRS+    S+
Sbjct: 241 TYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRSD 300

Query: 301 LMDES 302
            MDES
Sbjct: 301 SMDES 302

[Close]

BLAST of Carg22673 vs. TrEMBL
Match: tr|A0A1S3BP07|A0A1S3BP07_CUCME (26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492157 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 4.8e-149
Identity = 278/306 (90.85%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60
           MDSSS EAVP MQEILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQN
Sbjct: 1   MDSSSIEAVPAMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60

Query: 61  VIEDVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISIN 120
           VIED   DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCIS+N
Sbjct: 61  VIED---DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVN 120

Query: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIE-SSDID 180
           DYINRPLEFLEEE+ VASTP+ VSEGTVEEN PSSSSLRPVKLEDLQRILSNIE S+DID
Sbjct: 121 DYINRPLEFLEEEEPVASTPMHVSEGTVEENTPSSSSLRPVKLEDLQRILSNIEPSADID 180

Query: 181 VDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDS 240
           VDPDAGFGLGDLLKPDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQVDS
Sbjct: 181 VDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDS 240

Query: 241 FTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDVRSE----S 300
           FTYVLRTGQIDLSQFGIDPSKYKFTVLSFL+ALEDSVSK SSSE  QD KDVRS+    S
Sbjct: 241 FTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDVRSQSFNRS 300

Query: 301 NLMDES 302
           + MDES
Sbjct: 301 DSMDES 303

[Close]

BLAST of Carg22673 vs. TrEMBL
Match: tr|A0A0A0LKE1|A0A0A0LKE1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070250 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 5.3e-148
Identity = 271/292 (92.81%), Postives = 281/292 (96.23%), Query Frame = 0


Query: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60
           MDSSSTEAVP MQEILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQW+DRTQN
Sbjct: 1   MDSSSTEAVPEMQEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWIDRTQN 60

Query: 61  VIEDVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISIN 120
           VIED   DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCIS+N
Sbjct: 61  VIED---DQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVN 120

Query: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIE-SSDID 180
           DYINRPLEFLEEE+ VASTP+ VSEGTVEENIPSSSSLRPVKLEDLQRILSNIE S+DID
Sbjct: 121 DYINRPLEFLEEEEPVASTPMHVSEGTVEENIPSSSSLRPVKLEDLQRILSNIEPSADID 180

Query: 181 VDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDS 240
           VDPDAGFGLGDLLKPDLIMP+LETLPLEQSLASYLPEGPW+PEDILELLQSPPFRQQVDS
Sbjct: 181 VDPDAGFGLGDLLKPDLIMPVLETLPLEQSLASYLPEGPWTPEDILELLQSPPFRQQVDS 240

Query: 241 FTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKDV 292
           FTYVLRTGQIDLSQFGIDPSKYKFTVLSFL+ALEDSVSK SSSE  QD KD+
Sbjct: 241 FTYVLRTGQIDLSQFGIDPSKYKFTVLSFLDALEDSVSKTSSSELEQDNKDL 289

[Close]

BLAST of Carg22673 vs. TrEMBL
Match: tr|M5XDA5|M5XDA5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G063800 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 9.4e-121
Identity = 235/324 (72.53%), Postives = 261/324 (80.56%), Query Frame = 0


Query: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60
           M SSS  A+P MQEI+LEFRAGKM FEGK+V PDTRKGLVRI +G+EGL+HFQWLDR+QN
Sbjct: 1   MGSSSNAAIPQMQEIMLEFRAGKMVFEGKKVAPDTRKGLVRIAKGDEGLVHFQWLDRSQN 60

Query: 61  VIEDVSKDQIVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISIN 120
           V+ED   DQI+FPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAE+D  LC S+N
Sbjct: 61  VVED---DQIIFPDEAVFEKVNQASGRVYLLKFNTDDRKFFFWMQEPKAENDSHLCSSVN 120

Query: 121 DYINRPLEFLEEEQSVASTPLQVSEGTVEENIPS------------------SSSLRPVK 180
            Y+NRPLEFL+EE   AS PLQVSE  VE++I S                  +SS  PVK
Sbjct: 121 YYLNRPLEFLDEEGPDASVPLQVSEDVVEDDISSRAGILVEPNFGAEVSSDVTSSSGPVK 180

Query: 181 LEDLQRILSNIESSDIDVDPDAGFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPE 240
           LEDLQRILSNI+ +D  +DPD G  LGD+LKPDLIMPL+ETL LEQ L SYLPEG WSPE
Sbjct: 181 LEDLQRILSNIDPADTALDPDEGLSLGDILKPDLIMPLIETLQLEQRLESYLPEGQWSPE 240

Query: 241 DILELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMS-S 300
           DILELLQSPPFRQQ+DSF YVLRTGQIDLSQFG+DPSKYKFTVLSFLEALEDSVSK S S
Sbjct: 241 DILELLQSPPFRQQMDSFAYVLRTGQIDLSQFGVDPSKYKFTVLSFLEALEDSVSKASES 300

Query: 301 SEAGQDEKDVRSES----NLMDES 302
            E+ QD KD+RSES    + MDES
Sbjct: 301 DESRQDNKDLRSESCNRNDPMDES 321

[Close]

BLAST of Carg22673 vs. TrEMBL
Match: tr|A0A061GS42|A0A061GS42_THECC (Regulatory particle non-ATPase 13 OS=Theobroma cacao OX=3641 GN=TCM_039785 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 2.6e-118
Identity = 239/362 (66.02%), Postives = 266/362 (73.48%), Query Frame = 0


Query: 1   MDSSSTEAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQN 60
           M SSSTEA P MQE LLEFRAGKM  EGKRV+PDTRKGL+RI RGEEGL+HFQWLDRTQN
Sbjct: 1   MGSSSTEAFPAMQETLLEFRAGKMLLEGKRVVPDTRKGLIRITRGEEGLVHFQWLDRTQN 60

Query: 61  VIEDVS--------------------------------------KDQIVFPDEAVFEKVN 120
            IEDVS                                      +DQI+FPDEAVFEKVN
Sbjct: 61  AIEDVSYFLYFVLLSHFNISFCLILVIHFHQAEMVSSVAHPCKLQDQIIFPDEAVFEKVN 120

Query: 121 QASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISINDYINRPLEFLEEEQSVASTPLQ 180
           QASGRVY+LKF TDDRKFFFWMQEPKAEDD QLC S+N+ IN+PLEFL +E+  AS PLQ
Sbjct: 121 QASGRVYILKFNTDDRKFFFWMQEPKAEDDSQLCSSVNNIINQPLEFLGDEEPDASAPLQ 180

Query: 181 VSEGTVEENIPS------------------SSSLRPVKLEDLQRILSNIESSDIDVDPDA 240
           VSE  VE++I S                  +SS  PVKLEDLQRILS+I  ++I  DPD 
Sbjct: 181 VSEDMVEDDISSRAGNLTVTNLGAEAISDVTSSSGPVKLEDLQRILSSIGPAEIAGDPDG 240

Query: 241 GFGLGDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVL 300
           G  LGD+LKPDLIMPL+ETLPLE+ LASYLPEG W+PED+LELLQSPPFRQQVDSFTYVL
Sbjct: 241 GLELGDILKPDLIMPLIETLPLEERLASYLPEGQWTPEDLLELLQSPPFRQQVDSFTYVL 300

Query: 301 RTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMS-SSEAGQDEKDVRSES----NLMD 302
           RTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMS S +  QD+KD+R +S    + MD
Sbjct: 301 RTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSESGDTWQDDKDLRPQSCNRNDPMD 360

The following BLAST results are available for this feature:

BLAST of Carg22673 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937753.1	9.7e-162	98.67	26S proteasome regulatory subunit RPN13 isoform X2 [Cucurbita moschata] >XP_0235...	[more]
XP_022966078.1	2.2e-161	98.34	26S proteasome regulatory subunit RPN13 isoform X2 [Cucurbita maxima]	[more]
XP_022937752.1	2.4e-160	98.34	26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita moschata] >XP_0235...	[more]
XP_022966077.1	5.3e-160	98.01	26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita maxima]	[more]
XP_011648975.1	7.7e-151	91.48	PREDICTED: 26S proteasome regulatory subunit RPN13 isoform X2 [Cucumis sativus]	[more]

BLAST of Carg22673 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26590.1	3.4e-100	64.19	regulatory particle non-ATPase 13	[more]

BLAST of Carg22673 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O48726\|RPN13_ARATH	6.1e-99	64.19	26S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana OX=3702 GN=RPN13...	[more]
sp\|Q6NZ09\|ADRM1_DANRE	2.7e-30	28.39	Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio OX=7955 GN=adrm1b PE=1 SV=1	[more]
sp\|Q98SH3\|ADRM1_CHICK	1.8e-29	28.13	Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus OX=9031 GN=ADRM1 PE=2 SV=1	[more]
sp\|Q6P877\|ADRM1_XENTR	4.3e-28	50.89	Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis OX=8364 GN=adrm1 PE=2...	[more]
sp\|Q6GN67\|ADM1A_XENLA	5.6e-28	50.89	Proteasomal ubiquitin receptor ADRM1-A OS=Xenopus laevis OX=8355 GN=adrm1-a PE=2...	[more]

BLAST of Carg22673 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQP8\|A0A1S3BQP8_CUCME	3.3e-150	91.15	26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A1S3BP07\|A0A1S3BP07_CUCME	4.8e-149	90.85	26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A0A0LKE1\|A0A0A0LKE1_CUCSA	5.3e-148	92.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070250 PE=4 SV=1	[more]
tr\|M5XDA5\|M5XDA5_PRUPE	9.4e-121	72.53	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G063800 PE=4 SV=1	[more]
tr\|A0A061GS42\|A0A061GS42_THECC	2.6e-118	66.02	Regulatory particle non-ATPase 13 OS=Theobroma cacao OX=3641 GN=TCM_039785 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR038633	Rpn13/ADRM1_sf
IPR006773	Rpn13/ADRM1
IPR038108	RPN13_C_sf
IPR032368	RPN13_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22673-RA	Carg22673-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032368	UCH-binding domain	PFAM	PF16550	RPN13_C	coord: 167..272 e-value: 1.5E-23 score: 83.0
IPR038108	UCH-binding domain superfamily	GENE3D	G3DSA:3.40.190.140		coord: 167..277 e-value: 4.7E-20 score: 73.7
IPR006773	Proteasomal ubiquitin receptor Rpn13/ADRM1	PFAM	PF04683	Proteasom_Rpn13	coord: 22..106 e-value: 5.1E-24 score: 84.5
IPR006773	Proteasomal ubiquitin receptor Rpn13/ADRM1	PANTHER	PTHR12225	ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN	coord: 12..280
IPR038633	Proteasomal ubiquitin receptor Rpn13/ADRM1 superfamily	GENE3D	G3DSA:2.30.29.70		coord: 15..125 e-value: 4.4E-34 score: 118.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..301
None	No IPR available	CDD	cd13314	PH_Rpn13	coord: 17..123 e-value: 8.58688E-53 score: 169.372

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22673	Csa2G070250	Cucumber (Chinese Long) v2	carcuB0005
Carg22673	MELO3C003927	Melon (DHL92) v3.5.1	carmeB0004
Carg22673	ClCG11G011350	Watermelon (Charleston Gray)	carwcgB0006
Carg22673	CSPI02G06710	Wild cucumber (PI 183967)	carcpiB0005
Carg22673	Cucsa.178980	Cucumber (Gy14) v1	carcgyB0005
Carg22673	CmoCh12G009340	Cucurbita moschata (Rifu)	carcmoB0008
Carg22673	Lsi11G008210	Bottle gourd (USVL1VR-Ls)	carlsiB004
Carg22673	Cp4.1LG07g07760	Cucurbita pepo (Zucchini)	carcpeB0007
Carg22673	MELO3C003927.2	Melon (DHL92) v3.6.1	carmedB0005
Carg22673	CsaV3_2G009110	Cucumber (Chinese Long) v3	carcucB0005
Carg22673	Cla97C11G217420	Watermelon (97103) v2	carwmbB0004
Carg22673	Bhi06G001021	Wax gourd	carwgoB0006

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22673	Watermelon (97103) v1	carwmB0008
Carg22673	Wax gourd	carwgoB0005
Carg22673	Silver-seed gourd	carcarB004
Carg22673	Cucumber (Gy14) v2	carcgybB0004
Carg22673	Cucurbita maxima (Rimu)	carcmaB0008
Carg22673	Cucurbita maxima (Rimu)	carcmaB0009
Carg22673	Cucurbita moschata (Rifu)	carcmoB0009
Carg22673	Cucurbita pepo (Zucchini)	carcpeB0005