Cucsa.177640 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.177640
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Myb-like transcription factor family protein
Location	scaffold01225 : 1599347 .. 1600891 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACACTATGTCCTTACCATTACAAGAAAGTGGATCAAACAGCCTCAAACTTCCCTACATATAACATTTTAATTTGTTGCTTCTATCCATCCCTTCCTTCCTATGATTATGCTATGAAGTTGATGATGAATGAGTACAAAGAGTTTTGTCCACTCTCCTATTTGGATTCCCCATTTCATGATTTTTATGTCTTTGAAGGATGTCAAACTTTTTCCGAGGTTGAGTCTTCATTTGCATCCTCCAACACTAATGATCGTCACCACCACTTTCTTATTTCTTCTTCTTTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAACTGTTCCCAAGAGTTTGATGGTGAGAACTGTTCTTGGTCATGTGAGGAGTTGATGCCAATTAATCGCAACAAAAAGGTCAGTTTATAAAAGTACTTGCCTTGTTCTTGAATTTCATTCCAAAAAGTTGTGTATTGATAAAATTGATCTTTTTTTTtCCTTTAGTTTAACTACTACTTACTATGTTCTTATACTTTTAGCTTGGATTGATTTAGCCCATGTACCTACAAATATTGAAAGGAAGTACTAAAATAGTCACTTTTCAAAAGTGAAAGATGTACTCTTAGTTTTAGTTCATTTTAATTTTTGTACTTTCAAGATGTCAATTTTGGTTTATGTGCCTTGAAAAGTGACCATTTTTGTTCTACTTTGCAAAATTTAGAGGAAAAGTAAGATGGAAATAAAAaTAAATTGGCTAATTCAAAAGTACAGAGAGAGAAGTAAGGGTAAGAGTACTAAAACCAACTAAAGTAGTATTtAAaCTAGTttttTTTTTTTTTttGTTCTTGTTCTCGTGCAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATGGACGGAAGAGCTTCACCAAAGGTTCACCAATTGCGTCGATCAGCTCGGAGGCGCACAAAGTAAGTAACGTATATTGTAAACGATCAAAGATGTTATGGCCATCTGAGAATTAGTAACTCAGTGTTTGTTGCAAGTGCAGAAGCCACACCAAAGCAACTCTTTCACTTAATGAAGACTAAAGGATTGACTCTCATCCATATAAAAAGCCACTTACAGGTTTGCGTTTGCTATGCAGTAAAAGTTAATAACATTTCACTCTCGGTTTGTCATTCTTTTGATTTGGTTTTTGATCAAATCCTTTTTtCCTTATCAGAAATATCGCATTTCCCAGCAGATTCAAGAACTTTCAAAAGGTGTATATTCTTGTTCTAATCCTAAACTCTATCAAACTAGAAATGTAAACTTAACTAAAACTCTCAACAAAACCAATCAAATACTGATGTGTTTTGTGAAGCAGGAAAATCTGAGAGACAAATTAACAAGAAAGAAACGATGCAGGGTAGCCAAAACATGTAAGTTTGTGTATCTGGTTTGCATTTACATTAATCACAACAAGAAAATGTTACAAACTTTGATTAATTTCCAAGCAGAGGGAAACAGTTGATGGAAGTAGTGAGACAACAACTTCATGCTCAGAGTAGTTTGAATGAACAATTGAAG

mRNA sequence

ATGACAACACTATGTCCTTACCATTACAAGAAAGTGGATCAAACAGCCTCAAACTTCCCTACATATAACATTTTAATTTGTTGCTTCTATCCATCCCTTCCTTCCTATGATTATGCTATGAAGTTGATGATGAATGAGTACAAAGAGTTTTGTCCACTCTCCTATTTGGATTCCCCATTTCATGATTTTTATGTCTTTGAAGGATGTCAAACTTTTTCCGAGGTTGAGTCTTCATTTGCATCCTCCAACACTAATGATCGTCACCACCACTTTCTTATTTCTTCTTCTTTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAACTGTTCCCAAGAGTTTGATGGTGAGAACTGTTCTTGGTCATGTGAGGAGTTGATGCCAATTAATCGCAACAAAAAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATGGACGGAAGAGCTTCACCAAAGGTTCACCAATTGCGTCGATCAGCTCGGAGGCGCACAAAAAGCCACACCAAAGCAACTCTTTCACTTAATGAAGACTAAAGGATTGACTCTCATCCATATAAAAAGCCACTTACAGAAATATCGCATTTCCCAGCAGATTCAAGAACTTTCAAAAGGAAAATCTGAGAGACAAATTAACAAGAAAGAAACGATGCAGGGTAGCCAAAACATAGGGAAACAGTTGATGGAAGTAGTGAGACAACAACTTCATGCTCAGAGTAGTTTGAATGAACAATTGAAG

Coding sequence (CDS)

ATGACAACACTATGTCCTTACCATTACAAGAAAGTGGATCAAACAGCCTCAAACTTCCCTACATATAACATTTTAATTTGTTGCTTCTATCCATCCCTTCCTTCCTATGATTATGCTATGAAGTTGATGATGAATGAGTACAAAGAGTTTTGTCCACTCTCCTATTTGGATTCCCCATTTCATGATTTTTATGTCTTTGAAGGATGTCAAACTTTTTCCGAGGTTGAGTCTTCATTTGCATCCTCCAACACTAATGATCGTCACCACCACTTTCTTATTTCTTCTTCTTTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAACTGTTCCCAAGAGTTTGATGGTGAGAACTGTTCTTGGTCATGTGAGGAGTTGATGCCAATTAATCGCAACAAAAAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATGGACGGAAGAGCTTCACCAAAGGTTCACCAATTGCGTCGATCAGCTCGGAGGCGCACAAAAAGCCACACCAAAGCAACTCTTTCACTTAATGAAGACTAAAGGATTGACTCTCATCCATATAAAAAGCCACTTACAGAAATATCGCATTTCCCAGCAGATTCAAGAACTTTCAAAAGGAAAATCTGAGAGACAAATTAACAAGAAAGAAACGATGCAGGGTAGCCAAAACATAGGGAAACAGTTGATGGAAGTAGTGAGACAACAACTTCATGCTCAGAGTAGTTTGAATGAACAATTGAAG

Protein sequence

MTTLCPYHYKKVDQTASNFPTYNILICCFYPSLPSYDYAMKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHSPNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQNIGKQLMEVVRQQLHAQSSLNEQLK

Homology

[Close]

BLAST of Cucsa.177640 vs. Swiss-Prot
Match: PHL5_ARATH (Myb family transcription factor PHL5 OS=Arabidopsis thaliana GN=PHL5 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.7e-25
Identity = 65/167 (38.92%), Postives = 95/167 (56.89%), Query Frame = 1


Query: 82  SNTNDRHHHFLISSSFHSPNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIV 141
           SN+N  H +F  +SS H P     +  S  S    G + + +C                V
Sbjct: 149 SNSNVTHLNF--TSSQHQPKQSHPRFSSPPSFSIHGGSMAPNC----------------V 208

Query: 142 SKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQI 201
           +KTRI+WT++LH++F  CV++LGGA KATPK +   M + GLT+ H+KSHLQKYRI++ +
Sbjct: 209 NKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYM 268

Query: 202 QELSKGKSERQINKKETMQGSQNIGKQLMEVVRQQLHAQSSLNEQLK 249
            E  +GK E++   KE  Q     G Q+ E ++ QL  Q  L+EQL+
Sbjct: 269 PESQEGKFEKRACAKELSQLDTRTGVQIKEALQLQLDVQRHLHEQLE 297

[Close]

BLAST of Cucsa.177640 vs. Swiss-Prot
Match: PHR3_ORYSJ (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica GN=PHR3 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.1e-21
Identity = 53/143 (37.06%), Postives = 87/143 (60.84%), Query Frame = 1


Query: 109 SNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQK 168
           S+CS + D ++     +  +  +R+    +S  +K R++WT ELH+RF + V++L G +K
Sbjct: 232 SSCSDQEDLQDARSPAKVQLSSSRSSSGTASC-NKPRLRWTPELHERFVDAVNKLEGPEK 291

Query: 169 ATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQNIGK- 228
           ATPK +  LMK +GLT+ HIKSHLQKYR+++ + E  + K + +   K    G+ +  K 
Sbjct: 292 ATPKGVLKLMKVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEEKKTKSVANGNDHAKKK 351

Query: 229 --QLMEVVRQQLHAQSSLNEQLK 249
             Q+ E +R Q+  Q  L+EQL+
Sbjct: 352 SAQMAEALRMQMEVQKQLHEQLE 373

[Close]

BLAST of Cucsa.177640 vs. Swiss-Prot
Match: PHR3_ORYSI (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica GN=PHR3 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.1e-21
Identity = 53/143 (37.06%), Postives = 87/143 (60.84%), Query Frame = 1


Query: 109 SNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQK 168
           S+CS + D ++     +  +  +R+    +S  +K R++WT ELH+RF + V++L G +K
Sbjct: 232 SSCSDQEDLQDARSPAKVQLSSSRSSSGTASC-NKPRLRWTPELHERFVDAVNKLEGPEK 291

Query: 169 ATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQNIGK- 228
           ATPK +  LMK +GLT+ HIKSHLQKYR+++ + E  + K + +   K    G+ +  K 
Sbjct: 292 ATPKGVLKLMKVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEEKKTKSVANGNDHAKKK 351

Query: 229 --QLMEVVRQQLHAQSSLNEQLK 249
             Q+ E +R Q+  Q  L+EQL+
Sbjct: 352 SAQMAEALRMQMEVQKQLHEQLE 373

[Close]

BLAST of Cucsa.177640 vs. Swiss-Prot
Match: PHR2_ORYSI (Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. indica GN=PHR2 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 53/109 (48.62%), Postives = 72/109 (66.06%), Query Frame = 1


Query: 142 SKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQI 201
           SKTR++WT ELH+RF + V+ LGG++KATPK +  LMK   LT+ H+KSHLQKYR ++  
Sbjct: 245 SKTRMRWTPELHERFVDAVNLLGGSEKATPKGVLKLMKADNLTIYHVKSHLQKYRTARYR 304

Query: 202 QELSKGKSERQINKKETMQGSQNIGK--QLMEVVRQQLHAQSSLNEQLK 249
            ELS+G SE++   KE +      G    L E +R QL  Q  L+EQL+
Sbjct: 305 PELSEGSSEKKAASKEDIPSIDLKGGNFDLTEALRLQLELQKRLHEQLE 353

[Close]

BLAST of Cucsa.177640 vs. Swiss-Prot
Match: PHR2_ORYSJ (Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. japonica GN=PHR2 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 53/109 (48.62%), Postives = 72/109 (66.06%), Query Frame = 1


Query: 142 SKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQI 201
           SKTR++WT ELH+RF + V+ LGG++KATPK +  LMK   LT+ H+KSHLQKYR ++  
Sbjct: 245 SKTRMRWTPELHERFVDAVNLLGGSEKATPKGVLKLMKADNLTIYHVKSHLQKYRTARYR 304

Query: 202 QELSKGKSERQINKKETMQGSQNIGK--QLMEVVRQQLHAQSSLNEQLK 249
            ELS+G SE++   KE +      G    L E +R QL  Q  L+EQL+
Sbjct: 305 PELSEGSSEKKAASKEDIPSIDLKGGNFDLTEALRLQLELQKRLHEQLE 353

[Close]

BLAST of Cucsa.177640 vs. TrEMBL
Match: A0A0A0LEY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G702590 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.1e-84
Identity = 153/160 (95.62%), Postives = 154/160 (96.25%), Query Frame = 1


Query: 40  MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS 99
           MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS
Sbjct: 1   MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS 60

Query: 100 PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC 159
           PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC
Sbjct: 61  PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC 120

Query: 160 VDQLGGAQ------KATPKQLFHLMKTKGLTLIHIKSHLQ 194
           VDQLGGAQ      +ATPKQLFHLMKTKGLTLIHIKSHLQ
Sbjct: 121 VDQLGGAQMFVASAEATPKQLFHLMKTKGLTLIHIKSHLQ 160

[Close]

BLAST of Cucsa.177640 vs. TrEMBL
Match: M0TF77_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.1e-24
Identity = 62/140 (44.29%), Postives = 89/140 (63.57%), Query Frame = 1


Query: 110 NCSQEFDGENCSWSCEELMPINRNKKLKSSIVS-KTRIKWTEELHQRFTNCVDQLGGAQK 169
           +CS   D  N     E+ +PI       ++ +S KTRI+WT++LH+RF  CV++LGGA+K
Sbjct: 243 SCSM--DKPNLRLQTEKQLPITSASVSSATAISNKTRIRWTQDLHERFVECVNRLGGAEK 302

Query: 170 ATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQNIGKQ 229
           ATPK +  LM + GLT+ H+KSHLQKYRI++ I E ++GK ER+       +    IG Q
Sbjct: 303 ATPKGILKLMNSAGLTIYHVKSHLQKYRIAKHIPESTEGKFERRAAAVSVTELDPKIGMQ 362

Query: 230 LMEVVRQQLHAQSSLNEQLK 249
           + E +R QL  Q  L+EQL+
Sbjct: 363 ISEALRLQLDVQMRLHEQLE 380

[Close]

BLAST of Cucsa.177640 vs. TrEMBL
Match: I1JNJ8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G143600 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 63/155 (40.65%), Postives = 97/155 (62.58%), Query Frame = 1


Query: 95  SSFHSPNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVS-KTRIKWTEELH 154
           SSF  PN     H    S + +  + + S   +  I  +    +++VS KTRI+WT++LH
Sbjct: 192 SSF--PNKGNQDHMLRFSSQIERLSPTLSAGSVSTIGNSASNVAAVVSSKTRIRWTKDLH 251

Query: 155 QRFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQI 214
           ++F  CV++LGGA++ATPK +  +M T GLT+ H+KSHLQKYRI++ I E S GKS+++ 
Sbjct: 252 EKFVECVNRLGGAEQATPKAILKMMNTDGLTIFHVKSHLQKYRIAKFIPEPSHGKSDKRT 311

Query: 215 NKKETMQGSQNIGKQLMEVVRQQLHAQSSLNEQLK 249
           + K+        G Q+ E ++ QL AQ  L+EQL+
Sbjct: 312 HTKDVHHLDVKTGIQIREALKLQLDAQRCLHEQLE 344

[Close]

BLAST of Cucsa.177640 vs. TrEMBL
Match: A0A0B2PI63_GLYSO (Myb family transcription factor APL OS=Glycine soja GN=glysoja_012717 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 63/155 (40.65%), Postives = 97/155 (62.58%), Query Frame = 1


Query: 95  SSFHSPNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVS-KTRIKWTEELH 154
           SSF  PN     H    S + +  + + S   +  I  +    +++VS KTRI+WT++LH
Sbjct: 123 SSF--PNKGNQDHMLRFSSQIERLSPTLSAGSVSTIGNSASNVAAVVSSKTRIRWTKDLH 182

Query: 155 QRFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQI 214
           ++F  CV++LGGA++ATPK +  +M T GLT+ H+KSHLQKYRI++ I E S GKS+++ 
Sbjct: 183 EKFVECVNRLGGAEQATPKAILKMMNTDGLTIFHVKSHLQKYRIAKFIPEPSHGKSDKRT 242

Query: 215 NKKETMQGSQNIGKQLMEVVRQQLHAQSSLNEQLK 249
           + K+        G Q+ E ++ QL AQ  L+EQL+
Sbjct: 243 HTKDVHHLDVKTGIQIREALKLQLDAQRCLHEQLE 275

[Close]

BLAST of Cucsa.177640 vs. TrEMBL
Match: A0A0K9RV66_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_024760 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-23
Identity = 67/166 (40.36%), Postives = 97/166 (58.43%), Query Frame = 1


Query: 85  NDRHHHFLISSSFHSPNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKS--SIVS 144
           N++    ++  S+ SP+ Q        S    GE        +MP+N      S  +I S
Sbjct: 192 NEKQDFRILDKSYDSPHGQ-------FSFSSQGEKQVIRPLGVMPLNSGNSFTSGAAISS 251

Query: 145 KTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQ 204
           KTRI+WT ELH++F  CV+ LGGA KATPK +  LM + GLT+ H+KSHLQKYRI++ + 
Sbjct: 252 KTRIRWTTELHEKFVECVNLLGGADKATPKAILKLMNSDGLTIFHVKSHLQKYRIAKYMP 311

Query: 205 ELSKGKSERQINKKETMQGSQNIGKQLMEVVRQQLHAQSSLNEQLK 249
           + ++GKSER+ +  +  Q     G QL E ++ QL  Q  L+EQL+
Sbjct: 312 DSTEGKSERRSSLNDVTQIEIKDGVQLKEALQLQLDVQRRLHEQLE 350

[Close]

BLAST of Cucsa.177640 vs. TAIR10
Match: AT5G06800.1 (AT5G06800.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 116.3 bits (290), Expect = 2.7e-26
Identity = 65/167 (38.92%), Postives = 95/167 (56.89%), Query Frame = 1


Query: 82  SNTNDRHHHFLISSSFHSPNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIV 141
           SN+N  H +F  +SS H P     +  S  S    G + + +C                V
Sbjct: 149 SNSNVTHLNF--TSSQHQPKQSHPRFSSPPSFSIHGGSMAPNC----------------V 208

Query: 142 SKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQI 201
           +KTRI+WT++LH++F  CV++LGGA KATPK +   M + GLT+ H+KSHLQKYRI++ +
Sbjct: 209 NKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYM 268

Query: 202 QELSKGKSERQINKKETMQGSQNIGKQLMEVVRQQLHAQSSLNEQLK 249
            E  +GK E++   KE  Q     G Q+ E ++ QL  Q  L+EQL+
Sbjct: 269 PESQEGKFEKRACAKELSQLDTRTGVQIKEALQLQLDVQRHLHEQLE 297

[Close]

BLAST of Cucsa.177640 vs. TAIR10
Match: AT3G04450.1 (AT3G04450.1 Homeodomain-like superfamily protein)

HSP 1 Score: 99.8 bits (247), Expect = 2.6e-21
Identity = 53/149 (35.57%), Postives = 83/149 (55.70%), Query Frame = 1


Query: 104 EAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQL 163
           E Q      QE    N       + P N      SS+ SK R++WT ELH+ F   ++QL
Sbjct: 199 ETQSSDIARQEIVFRNQHQVDPSMEPFNAKSPPASSMTSKQRMRWTPELHEAFVEAINQL 258

Query: 164 GGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQ 223
           GG+++ATPK +  L+ + GLT+ H+KSHLQKYR ++   ELSK   E  +   +T++  +
Sbjct: 259 GGSERATPKAVLKLINSPGLTVYHVKSHLQKYRTARYKPELSKDTEEPLVKNLKTIEDIK 318

Query: 224 NI----GKQLMEVVRQQLHAQSSLNEQLK 249
           ++      ++ E +R Q+  Q  L+EQL+
Sbjct: 319 SLDLKTSIEITEALRLQMKVQKQLHEQLE 347

[Close]

BLAST of Cucsa.177640 vs. TAIR10
Match: AT2G20400.1 (AT2G20400.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 95.9 bits (237), Expect = 3.7e-20
Identity = 59/168 (35.12%), Postives = 91/168 (54.17%), Query Frame = 1


Query: 92  LISSSFHSPNP-QEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSS---------IV 151
           L+ ++F+S +  Q+   QS   Q         SC EL P++R     S+           
Sbjct: 170 LLDTNFNSASKVQQPSMQSQIQQPQAVLQQPSSCVELRPLDRTVSSNSNNNSNSNNAAAA 229

Query: 152 SKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQI 211
           +K R++WT ELH+ F + V+QLGG+ +ATPK +   MK +GLT+ H+KSHLQKYR ++ I
Sbjct: 230 AKGRMRWTPELHEVFVDAVNQLGGSNEATPKGVLKHMKVEGLTIFHVKSHLQKYRTAKYI 289

Query: 212 QELSKGKSERQINKKETMQGSQ-NIGKQLMEVVRQQLHAQSSLNEQLK 249
              S+G  E ++   E +       G  + E +R Q+  Q  L+EQL+
Sbjct: 290 PVPSEGSPEARLTPLEQITSDDTKRGIDITETLRIQMEHQKKLHEQLE 337

[Close]

BLAST of Cucsa.177640 vs. TAIR10
Match: AT2G01060.1 (AT2G01060.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 47/113 (41.59%), Postives = 73/113 (64.60%), Query Frame = 1


Query: 138 SSIVSKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRI 197
           SS  SK R++WT ELH+RF + V QLGG  +ATPK +  +M  +GLT+ H+KSHLQKYR+
Sbjct: 10  SSHASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 69

Query: 198 SQQIQE-LSKGKSERQINKKETMQG-SQNIGKQLMEVVRQQLHAQSSLNEQLK 249
           ++ + +  S+GK   +    + + G   + G Q+ E ++ Q+  Q  L+EQL+
Sbjct: 70  AKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQKRLHEQLE 122

[Close]

BLAST of Cucsa.177640 vs. TAIR10
Match: AT4G28610.1 (AT4G28610.1 phosphate starvation response 1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-19
Identity = 54/151 (35.76%), Postives = 82/151 (54.30%), Query Frame = 1


Query: 100 PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC 159
           P PQ  Q Q + S E            L P++      ++   K R++WT ELH+ F   
Sbjct: 194 PQPQIVQQQPSPSVE------------LRPVSTTSSNSNNGTGKARMRWTPELHEAFVEA 253

Query: 160 VDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSK-GKSERQINKKET 219
           V+ LGG+++ATPK +  +MK +GLT+ H+KSHLQKYR ++   E S+ G  ER++   E 
Sbjct: 254 VNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTARYRPEPSETGSPERKLTPLEH 313

Query: 220 MQG-SQNIGKQLMEVVRQQLHAQSSLNEQLK 249
           +       G  + E +R Q+  Q  L+EQL+
Sbjct: 314 ITSLDLKGGIGITEALRLQMEVQKQLHEQLE 332

[Close]

BLAST of Cucsa.177640 vs. NCBI nr
Match: gi|778688763|ref|XP_011652834.1| (PREDICTED: protein PHR1-LIKE 1-like [Cucumis sativus])

HSP 1 Score: 430.6 bits (1106), Expect = 1.8e-117
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 40  MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS 99
           MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS
Sbjct: 1   MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS 60

Query: 100 PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC 159
           PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC
Sbjct: 61  PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC 120

Query: 160 VDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETM 219
           VDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETM
Sbjct: 121 VDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETM 180

Query: 220 QGSQNIGKQLMEVVRQQLHAQSSLNEQLK 249
           QGSQNIGKQLMEVVRQQLHAQSSLNEQLK
Sbjct: 181 QGSQNIGKQLMEVVRQQLHAQSSLNEQLK 209

[Close]

BLAST of Cucsa.177640 vs. NCBI nr
Match: gi|700203488|gb|KGN58621.1| (hypothetical protein Csa_3G702590 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 5.9e-84
Identity = 153/160 (95.62%), Postives = 154/160 (96.25%), Query Frame = 1


Query: 40  MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS 99
           MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS
Sbjct: 1   MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHS 60

Query: 100 PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC 159
           PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC
Sbjct: 61  PNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNC 120

Query: 160 VDQLGGAQ------KATPKQLFHLMKTKGLTLIHIKSHLQ 194
           VDQLGGAQ      +ATPKQLFHLMKTKGLTLIHIKSHLQ
Sbjct: 121 VDQLGGAQMFVASAEATPKQLFHLMKTKGLTLIHIKSHLQ 160

[Close]

BLAST of Cucsa.177640 vs. NCBI nr
Match: gi|727494494|ref|XP_010423296.1| (PREDICTED: uncharacterized protein LOC104708424 isoform X1 [Camelina sativa])

HSP 1 Score: 127.1 bits (318), Expect = 4.3e-26
Identity = 86/245 (35.10%), Postives = 127/245 (51.84%), Query Frame = 1


Query: 6   PYHYKKVDQTASNFPTYNILICCFYPSLPSYDYAMKLMMNEY--KEFCPLSYLDSPFHDF 65
           PYH++  D T+S   T +++     P LP  D  MK +      K+F   +   + +   
Sbjct: 80  PYHHQSSDHTSSLDQTVSMV-----PMLPLPDQYMKPLYQRSCAKDFAAANASSASYS-- 139

Query: 66  YVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHSPNPQEAQHQSNCSQEFDGENCSWS 125
             FE  Q   E+      SN+N  H +F   SS H P     +  S+ S    G + S +
Sbjct: 140 LSFEASQDPQEL-CRRTYSNSNVTHLNF---SSSHQPKQTHPKFPSHTSFSSHGGSVSPN 199

Query: 126 CEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGL 185
           C                V+KTRI+WT++LH++F  CV++LGGA KATPK +  LM + GL
Sbjct: 200 C----------------VNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSDGL 259

Query: 186 TLIHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQNIGKQLMEVVRQQLHAQSSL 245
           T+ H+KSHLQKYRI++ + E  +GK E++   KE  Q     G Q+ E ++ QL  Q  L
Sbjct: 260 TIFHVKSHLQKYRIAKYMPESLEGKFEKRACGKELSQLDTKTGVQIKEALQLQLDVQRHL 297

Query: 246 NEQLK 249
           +EQL+
Sbjct: 320 HEQLE 297

[Close]

BLAST of Cucsa.177640 vs. NCBI nr
Match: gi|727494496|ref|XP_010423297.1| (PREDICTED: uncharacterized protein LOC104708424 isoform X2 [Camelina sativa])

HSP 1 Score: 120.6 bits (301), Expect = 4.0e-24
Identity = 85/245 (34.69%), Postives = 126/245 (51.43%), Query Frame = 1


Query: 6   PYHYKKVDQTASNFPTYNILICCFYPSLPSYDYAMKLMMNEY--KEFCPLSYLDSPFHDF 65
           PYH++  D T+S   T +++     P LP  D  MK +      K+F   +   + +   
Sbjct: 80  PYHHQSSDHTSSLDQTVSMV-----PMLPLPDQYMKPLYQRSCAKDFAAANASSASYS-- 139

Query: 66  YVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHSPNPQEAQHQSNCSQEFDGENCSWS 125
             FE  Q   E+      SN+N  H +F   SS H P     +  S+ S    G + S +
Sbjct: 140 LSFEASQDPQEL-CRRTYSNSNVTHLNF---SSSHQPKQTHPKFPSHTSFSSHGGSVSPN 199

Query: 126 CEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGL 185
           C                V+KTRI+WT++LH++F  CV++LGGA KATPK +  LM + GL
Sbjct: 200 C----------------VNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSDGL 259

Query: 186 TLIHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQNIGKQLMEVVRQQLHAQSSL 245
           T+ H+KSHLQ YRI++ + E  +GK E++   KE  Q     G Q+ E ++ QL  Q  L
Sbjct: 260 TIFHVKSHLQ-YRIAKYMPESLEGKFEKRACGKELSQLDTKTGVQIKEALQLQLDVQRHL 296

Query: 246 NEQLK 249
           +EQL+
Sbjct: 320 HEQLE 296

[Close]

BLAST of Cucsa.177640 vs. NCBI nr
Match: gi|727560807|ref|XP_010452621.1| (PREDICTED: protein PHR1-LIKE 1-like [Camelina sativa])

HSP 1 Score: 119.4 bits (298), Expect = 8.9e-24
Identity = 83/246 (33.74%), Postives = 122/246 (49.59%), Query Frame = 1


Query: 6   PYHYKKVDQTASNFPTYNILICCFYPSLPSYDYAMKLMMNEYKEFCPLSYLD---SPFHD 65
           PYH++  D T+       +      P LP  D  MK +   Y+  C   +     S    
Sbjct: 80  PYHHQSSDHTSLEHTVSMV------PMLPLPDQYMKPL---YQRSCANDFAAANASSASY 139

Query: 66  FYVFEGCQTFSEVESSFASSNTNDRHHHFLISSSFHSPNPQEAQHQSNCSQEFDGENCSW 125
              FE  Q   E+      SN+N  H +F   SS H P     +  S+ S    G + + 
Sbjct: 140 SLSFEASQDPQEL-CRRTYSNSNVTHLNF---SSSHQPKQTHPKFPSHTSFSSHGGSVAP 199

Query: 126 SCEELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKG 185
           +C                V+KTRI+WT++LH++F  CV++LGGA +ATPK +  LM + G
Sbjct: 200 NC----------------VNKTRIRWTQDLHEKFVECVNRLGGADEATPKAILKLMDSDG 259

Query: 186 LTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQNIGKQLMEVVRQQLHAQSS 245
           LT+ H+KSHLQKYRI++ + E  +GK E++   KE  Q     G Q+ E ++ QL  Q  
Sbjct: 260 LTIFHVKSHLQKYRIAKYMPESLEGKFEKRACGKELSQLDTKTGVQIKEALQLQLDVQRH 296

Query: 246 LNEQLK 249
           L+EQL+
Sbjct: 320 LHEQLE 296

The following BLAST results are available for this feature:

BLAST of Cucsa.177640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHL5_ARATH	4.7e-25	38.92	Myb family transcription factor PHL5 OS=Arabidopsis thaliana GN=PHL5 PE=2 SV=1	[more]
PHR3_ORYSJ	7.1e-21	37.06	Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica GN=PHR3 ...	[more]
PHR3_ORYSI	7.1e-21	37.06	Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica GN=PHR3 PE...	[more]
PHR2_ORYSI	1.2e-20	48.62	Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. indica GN=PHR2 PE...	[more]
PHR2_ORYSJ	1.2e-20	48.62	Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. japonica GN=PHR2 ...	[more]

BLAST of Cucsa.177640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEY1_CUCSA	4.1e-84	95.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G702590 PE=4 SV=1	[more]
M0TF77_MUSAM	8.1e-24	44.29	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
I1JNJ8_SOYBN	1.1e-23	40.65	Uncharacterized protein OS=Glycine max GN=GLYMA_03G143600 PE=4 SV=1	[more]
A0A0B2PI63_GLYSO	1.1e-23	40.65	Myb family transcription factor APL OS=Glycine soja GN=glysoja_012717 PE=4 SV=1	[more]
A0A0K9RV66_SPIOL	1.4e-23	40.36	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_024760 PE=4 SV=1	[more]

BLAST of Cucsa.177640 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06800.1	2.7e-26	38.92	myb-like HTH transcriptional regulator family protein	[more]
AT3G04450.1	2.6e-21	35.57	Homeodomain-like superfamily protein	[more]
AT2G20400.1	3.7e-20	35.12	myb-like HTH transcriptional regulator family protein	[more]
AT2G01060.1	1.8e-19	41.59	myb-like HTH transcriptional regulator family protein	[more]
AT4G28610.1	3.2e-19	35.76	phosphate starvation response 1	[more]

BLAST of Cucsa.177640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778688763\|ref\|XP_011652834.1\|	1.8e-117	100.00	PREDICTED: protein PHR1-LIKE 1-like [Cucumis sativus]	[more]
gi\|700203488\|gb\|KGN58621.1\|	5.9e-84	95.63	hypothetical protein Csa_3G702590 [Cucumis sativus]	[more]
gi\|727494494\|ref\|XP_010423296.1\|	4.3e-26	35.10	PREDICTED: uncharacterized protein LOC104708424 isoform X1 [Camelina sativa]	[more]
gi\|727494496\|ref\|XP_010423297.1\|	4.0e-24	34.69	PREDICTED: uncharacterized protein LOC104708424 isoform X2 [Camelina sativa]	[more]
gi\|727560807\|ref\|XP_010452621.1\|	8.9e-24	33.74	PREDICTED: protein PHR1-LIKE 1-like [Camelina sativa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.177640.1	Cucsa.177640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 143..198 score: 8.4
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 142..198 score: 1.8
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 141..199 score: 1.79
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 140..200 score: 10
None	No IPR available	PANTHER	PTHR31314	FAMILY NOT NAMED	coord: 98..248 score: 2.2
None	No IPR available	PANTHER	PTHR31314:SF7	MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN	coord: 98..248 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.177640	Csa3G702590	Cucumber (Chinese Long) v2	cgycuB268
Cucsa.177640	ClCG10G012620	Watermelon (Charleston Gray)	cgywcgB312
Cucsa.177640	CSPI03G29960	Wild cucumber (PI 183967)	cgycpiB278
Cucsa.177640	Lsi03G012310	Bottle gourd (USVL1VR-Ls)	cgylsiB297
Cucsa.177640	Cp4.1LG03g09110	Cucurbita pepo (Zucchini)	cgycpeB0489
Cucsa.177640	MELO3C030927.2	Melon (DHL92) v3.6.1	cgymedB312
Cucsa.177640	CsaV3_3G032430	Cucumber (Chinese Long) v3	cgycucB281
Cucsa.177640	Cla97C10G195490	Watermelon (97103) v2	cgywmbB317
Cucsa.177640	Bhi11G001212	Wax gourd	cgywgoB360

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.177640	Cucurbita pepo (Zucchini)	cgycpeB0487
Cucsa.177640	Silver-seed gourd	carcgyB0858
Cucsa.177640	Silver-seed gourd	carcgyB0928
Cucsa.177640	Cucurbita maxima (Rimu)	cgycmaB0497
Cucsa.177640	Cucurbita maxima (Rimu)	cgycmaB0499
Cucsa.177640	Cucurbita moschata (Rifu)	cgycmoB0499
Cucsa.177640	Cucurbita moschata (Rifu)	cgycmoB0501
Cucsa.177640	Melon (DHL92) v3.5.1	cgymeB317
Cucsa.177640	Watermelon (97103) v1	cgywmB334