Cp4.1LG03g09110 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g09110
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMyb-like transcription factor family protein
LocationCp4.1LG03 : 5675083 .. 5677183 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATGTGAAACTTTCTCTGAAGCAGAGTCTTCATTTGTATCCACCAACACTGAAGATGATCAACCTCACCTTCATTTCTCATCTTTTACTTTTGATTCATCAAAGCATCAAGGAGAAGCTCAAGAACAATCAAGCTGCTGCCAAGAGTTCAGCGGTGACTGTTCCTGGTCATGGGAAGAGTTGATGGGGAATGAGAATAAAAAGGTTTGTCGATTAGTCCGTTCTGTTTTGTTTTGGTTTGGTTCATTTTGGTCTTTGTAATTCCCTATATGATGAATTTGATTCGTATATTGTGTTTAAACCTTTTCTTTTTTGGTTCTTGTTCTCTTTTTCGTTGTGTTTCAGTCAAAATCAAGGATTGGTTCGNCGATTAGTCCGTTCTGTTTTGTTTTGGTTTGGTTCATTTTGGTCTTTGTAATTCCCTATATGATGAATTTGATTCGTATATTTTGTGTTTAAACCTTTTCTTTTTTGGTTCTTGTTCTCTTTTTCGTTGTGTTTCAGTCAAAATCAAGGATTGGTTCGAAGAAGCGAATTAAATGGACTGAAGAACTTCACCAGAAATTCATGAATTGTGTGGATCAGCTTGGTGGCACTCGAAGTAAGTAACGTTTTTGGTAAATGAGGATATCCCCATCTGAATTAGTAACTCTGTTTGTTACAAAAGTGCAGAAGCCACACCAAAGCAACTCCTCCACTTGATGAAAACTGAAGGATTGACTCTCATCCATATAAAAAGCCACTTGCAGGTTTGTATACAGAAAAAGCTACCAAAATTTCACTCTAAATTTCTTATTCTTTTGATTTAGTTTTTAACCAAATGGTTTTCCGTTTCAGAAATACCGCATTTCACAGCATATTCGAGATTTTTCAAAAGGTATGTTTTATGAATTACAGAACGTGTCAATCTAGATAGTTAACGTCTTATACATTAAAAAGTATAATCACTAAAATAAAATGTTAAGATTGTCACGAGTACCCAAACTAGAAATATAATTTAACTGAAACTCTCAGCTAAACCAAACAAATAACGACGTGTTTTTCAAATCTCCATATCCCCTCGTGTACTAAAAGTCGACATNCTAGATAGTTAACGTCTTATACATTAAAAAGTATAATCACTACAATAAAATGTTAAGATTGTCACGAGTATCCAAACTAGAAATATAATTTAACTGAAACTCTCAGCTAAACCAAACAAACAACGACGTGTTTTTCAAATCTCCATATCCCCTCGTGTACTAAAAGTCGACGTGTTTGTGAAGCAGGAAAATCCGAGAGAGAAACTGACAAGGAACTGATGCTGGCTAACCAAAACAGGTAGATTTGTGTACTTGAGTTGCATTTACATTAATCACAACAAGAAAACGTTACAAACTTTCCTTACATATCCAAGCAGAGGGAAGCAGCTGGTGGAAGCAGCGAGACAACTACTTGCTACACAGAGTANTTTACATTAATCACAACAAGAAAACGTTACAAACTTTCCTTATATATCCAAGCAGAGGGAAGCAGCTGGTGGAAGCAGCGAGACAACTACTTGCTACACAGAGTAGTTTGAATGAACAATTGGAGGTCTGATTGAATGTTCCTTAGAAGTTATAATTTCATCAAATTTGACATCAAACATGAACAAATAATAGAACCTCATGCTTTATTCAAAAGTTGATGCTTGGGTTTTGGGTACAGGTTCAGAAGAACTTGATATCAGCTATTGAAGAACAATTGAAGCAACTGAGAGGAGTTTTAGAACGAAGAGGGAAACCTGTNCATGCTTTATTCAAAAGTTGATGCTTGGGTTTTGGGTACAGGTTCAGAAGAACTTGATATCAGCTATTGAAGAACAAATGAAGCAACTGAGAGGAGTTTTAGAACGAAGAGGGAAACCTGTTGTGTTTAGAAATGAGGAAGAGAGAAAATAAAATGGAGTTTGGTTGAATCAGAAAAATGTGTTCTTTCTACTGTCATCTTTTGATGTCAATATCCCTTCAATCTTCAACAAAAGTAACTCACATTTAAACACGCAAATAAAGGGTTACAGTAACAGAGATTCACNCAACAAAAGTAACTCACATTTAAACACGCAAATAAAGGGTTATAG

mRNA sequence

GGATGTGAAACTTTCTCTGAAGCAGAGTCTTCATTTGTATCCACCAACACTGAAGATGATCAACCTCACCTTCATTTCTCATCTTTTACTTTTGATTCATCAAAGCATCAAGGAGAAGCTCAAGAACAATCAAGCTGCTGCCAAGAGTTCAGCGGTGACTGTTCCTGGTCATGGGAAGAGTTGATGGGGAATGAGAATAAAAAGTCAAAATCAAGGATTGGTTCGAAGAAGCGAATTAAATGGACTGAAGAACTTCACCAGAAATTCATGAATTGTGTGGATCAGCTTGGTGGCACTCGAAAAGCCACACCAAAGCAACTCCTCCACTTGATGAAAACTGAAGGATTGACTCTCATCCATATAAAAAGCCACTTGCAGAAATACCGCATTTCACAGCATATTCGAGATTTTTCAAAAGGAAAATCCGAGAGAGAAACTGACAAGGAACTGATGCTGGCTAACCAAAACAGAGGGAAGCAGCTGGTGGAAGCAGCGAGACAACTACTTGCTACACAGAGTAGTTTGAATGAACAATTGGAGGTTCAGAAGAACTTGATATCAGCTATTGAAGAACAAATGAAGCAACTGAGAGGAGTTTTAGAACGAAGAGGGAAACCTGTTGTGTTTAGAAATGAGGAAGAGAGAAAATAAAATGGAGTTTGGTTGAATCAGAAAAATGTGTTCTTTCTACTGTCATCTTTTGATGTCAATATCCCTTCAATCTTCAACAAAAGTAACTCACATTTAAACACGCAAATAAAGGGTTACAGTAACAGAGATTCACNCAACAAAAGTAACTCACATTTAAACACGCAAATAAAGGGTTATAG

Coding sequence (CDS)

GGATGTGAAACTTTCTCTGAAGCAGAGTCTTCATTTGTATCCACCAACACTGAAGATGATCAACCTCACCTTCATTTCTCATCTTTTACTTTTGATTCATCAAAGCATCAAGGAGAAGCTCAAGAACAATCAAGCTGCTGCCAAGAGTTCAGCGGTGACTGTTCCTGGTCATGGGAAGAGTTGATGGGGAATGAGAATAAAAAGTCAAAATCAAGGATTGGTTCGAAGAAGCGAATTAAATGGACTGAAGAACTTCACCAGAAATTCATGAATTGTGTGGATCAGCTTGGTGGCACTCGAAAAGCCACACCAAAGCAACTCCTCCACTTGATGAAAACTGAAGGATTGACTCTCATCCATATAAAAAGCCACTTGCAGAAATACCGCATTTCACAGCATATTCGAGATTTTTCAAAAGGAAAATCCGAGAGAGAAACTGACAAGGAACTGATGCTGGCTAACCAAAACAGAGGGAAGCAGCTGGTGGAAGCAGCGAGACAACTACTTGCTACACAGAGTAGTTTGAATGAACAATTGGAGGTTCAGAAGAACTTGATATCAGCTATTGAAGAACAAATGAAGCAACTGAGAGGAGTTTTAGAACGAAGAGGGAAACCTGTTGTGTTTAGAAATGAGGAAGAGAGAAAATAA

Protein sequence

GCETFSEAESSFVSTNTEDDQPHLHFSSFTFDSSKHQGEAQEQSSCCQEFSGDCSWSWEELMGNENKKSKSRIGSKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHIRDFSKGKSERETDKELMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMKQLRGVLERRGKPVVFRNEEERK
Homology
[Close]
BLAST of Cp4.1LG03g09110 vs. Swiss-Prot
Match: PHL5_ARATH (Myb family transcription factor PHL5 OS=Arabidopsis thaliana GN=PHL5 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-25
Identity = 64/132 (48.48%), Postives = 94/132 (71.21%), Query Frame = 1 

Query: 75  SKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHI 134
           +K RI+WT++LH+KF+ CV++LGG  KATPK +L  M ++GLT+ H+KSHLQKYRI++++
Sbjct: 191 NKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYM 250

Query: 135 RDFSKGKSE-RETDKELMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQM 194
            +  +GK E R   KEL   +   G Q+ EA +  L  Q  L+EQLE+Q+NL   IEEQ 
Sbjct: 251 PESQEGKFEKRACAKELSQLDTRTGVQIKEALQLQLDVQRHLHEQLEIQRNLQLRIEEQG 310

Query: 195 KQLRGVLERRGK 206
           KQL+ ++E++ K
Sbjct: 311 KQLKMMMEQQQK 322

[Close]
BLAST of Cp4.1LG03g09110 vs. Swiss-Prot
Match: PHR1_ORYSI (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. indica GN=PHR1 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.6e-23
Identity = 58/131 (44.27%), Postives = 88/131 (67.18%), Query Frame = 1 

Query: 75  SKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHI 134
           SK+R++WT ELH+ F++ V++LGG+ KATPK +L LMK +GLT+ H+KSHLQKYR +++ 
Sbjct: 215 SKQRMRWTPELHESFVHAVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRTARYK 274

Query: 135 RDFSKGKSERETDKELMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMK 194
            D S+GK++     + +  +      L EA R  +  Q  L+EQLE+Q+ L   IEEQ K
Sbjct: 275 PDLSEGKTQEGKTTDELSLDLKASMDLTEALRLQMEVQKRLHEQLEIQRKLQLRIEEQGK 334

Query: 195 QLRGVLERRGK 206
            L+ + E++ K
Sbjct: 335 YLQKMFEKQCK 345

[Close]
BLAST of Cp4.1LG03g09110 vs. Swiss-Prot
Match: PHR1_ORYSJ (Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. japonica GN=PHR1 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.6e-23
Identity = 58/131 (44.27%), Postives = 88/131 (67.18%), Query Frame = 1 

Query: 75  SKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHI 134
           SK+R++WT ELH+ F++ V++LGG+ KATPK +L LMK +GLT+ H+KSHLQKYR +++ 
Sbjct: 215 SKQRMRWTPELHESFVHAVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRTARYK 274

Query: 135 RDFSKGKSERETDKELMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMK 194
            D S+GK++     + +  +      L EA R  +  Q  L+EQLE+Q+ L   IEEQ K
Sbjct: 275 PDLSEGKTQEGKTTDELSLDLKASMDLTEALRLQMEVQKRLHEQLEIQRKLQLRIEEQGK 334

Query: 195 QLRGVLERRGK 206
            L+ + E++ K
Sbjct: 335 YLQKMFEKQCK 345

[Close]
BLAST of Cp4.1LG03g09110 vs. Swiss-Prot
Match: PHR3_ORYSI (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica GN=PHR3 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.7e-21
Identity = 67/168 (39.88%), Postives = 100/168 (59.52%), Query Frame = 1 

Query: 44  SSCC-QEFSGDCSWSWEELMGNENKKSKSRIGSKKRIKWTEELHQKFMNCVDQLGGTRKA 103
           SSC  QE   D     +  + +    S +   +K R++WT ELH++F++ V++L G  KA
Sbjct: 232 SSCSDQEDLQDARSPAKVQLSSSRSSSGTASCNKPRLRWTPELHERFVDAVNKLEGPEKA 291

Query: 104 TPKQLLHLMKTEGLTLIHIKSHLQKYRISQHIRDFSKGKSERETDKELMLANQN-----R 163
           TPK +L LMK EGLT+ HIKSHLQKYR+++++ +  + K + E  K   +AN N     +
Sbjct: 292 TPKGVLKLMKVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEE-KKTKSVANGNDHAKKK 351

Query: 164 GKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMKQLRGVLERRGK 206
             Q+ EA R  +  Q  L+EQLEVQ+ L   IEE  + L+ +LE + K
Sbjct: 352 SAQMAEALRMQMEVQKQLHEQLEVQRQLQLRIEEHARYLQKILEEQQK 398

[Close]
BLAST of Cp4.1LG03g09110 vs. Swiss-Prot
Match: PHR3_ORYSJ (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica GN=PHR3 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.7e-21
Identity = 67/168 (39.88%), Postives = 100/168 (59.52%), Query Frame = 1 

Query: 44  SSCC-QEFSGDCSWSWEELMGNENKKSKSRIGSKKRIKWTEELHQKFMNCVDQLGGTRKA 103
           SSC  QE   D     +  + +    S +   +K R++WT ELH++F++ V++L G  KA
Sbjct: 232 SSCSDQEDLQDARSPAKVQLSSSRSSSGTASCNKPRLRWTPELHERFVDAVNKLEGPEKA 291

Query: 104 TPKQLLHLMKTEGLTLIHIKSHLQKYRISQHIRDFSKGKSERETDKELMLANQN-----R 163
           TPK +L LMK EGLT+ HIKSHLQKYR+++++ +  + K + E  K   +AN N     +
Sbjct: 292 TPKGVLKLMKVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEE-KKTKSVANGNDHAKKK 351

Query: 164 GKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMKQLRGVLERRGK 206
             Q+ EA R  +  Q  L+EQLEVQ+ L   IEE  + L+ +LE + K
Sbjct: 352 SAQMAEALRMQMEVQKQLHEQLEVQRQLQLRIEEHARYLQKILEEQQK 398

[Close]
BLAST of Cp4.1LG03g09110 vs. TrEMBL
Match: A0A0A0LEY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G702590 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-33
Identity = 89/134 (66.42%), Postives = 98/134 (73.13%), Query Frame = 1 

Query: 1   GCETFSEAESSFVSTNTEDDQPHLHFSSFTFDSSKHQGEAQEQSSCCQEFSGD-CSWSWE 60
           GC+TFSE ESSF S+NT D   H   SS +F S   Q EAQ QS+C QEF G+ CSWS E
Sbjct: 29  GCQTFSEVESSFASSNTNDRHHHFLISS-SFHSPNPQ-EAQHQSNCSQEFDGENCSWSCE 88

Query: 61  ELMG-NENKKSKSRIGSKKRIKWTEELHQKFMNCVDQLGGTR------KATPKQLLHLMK 120
           ELM  N NKK KS I SK RIKWTEELHQ+F NCVDQLGG +      +ATPKQL HLMK
Sbjct: 89  ELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQMFVASAEATPKQLFHLMK 148

Query: 121 TEGLTLIHIKSHLQ 127
           T+GLTLIHIKSHLQ
Sbjct: 149 TKGLTLIHIKSHLQ 160

[Close]
BLAST of Cp4.1LG03g09110 vs. TrEMBL
Match: M4EIV2_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.4e-26
Identity = 76/176 (43.18%), Postives = 108/176 (61.36%), Query Frame = 1 

Query: 31  FDSSKHQGEAQEQSSCCQEFSGDCSWSWEELMGNENKKSKSRIGSKKRIKWTEELHQKFM 90
           F SS HQ +          FS           G     +   +G+K RI+WT++LH+KF+
Sbjct: 158 FSSSHHQAKQTHPRFSSHSFSAH---------GGSMAPNCGTVGNKTRIRWTQDLHEKFV 217

Query: 91  NCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHIRDFSKGKSER-ETDKE 150
            CV++LGG  KATPK +L LM +EGLT+ H+KSHLQKYRI+++I D+ +GK E+    KE
Sbjct: 218 ECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYIPDYQEGKFEKGSCSKE 277

Query: 151 LMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMKQLRGVLERRGK 206
           L   +   G Q+ EA +  L  Q  L+EQLE+Q+NL   IEEQ KQL+ ++E++ K
Sbjct: 278 LSQLDTKTGVQIKEALQLQLDVQRHLHEQLEIQRNLQLRIEEQGKQLKIMIEQQQK 324

[Close]
BLAST of Cp4.1LG03g09110 vs. TrEMBL
Match: A0A078EWN6_BRANA (BnaAnng01860D protein OS=Brassica napus GN=BnaAnng01860D PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.4e-26
Identity = 76/176 (43.18%), Postives = 108/176 (61.36%), Query Frame = 1 

Query: 31  FDSSKHQGEAQEQSSCCQEFSGDCSWSWEELMGNENKKSKSRIGSKKRIKWTEELHQKFM 90
           F SS HQ +          FS           G     +   +G+K RI+WT++LH+KF+
Sbjct: 158 FSSSHHQAKQTHPRFSSHSFSAH---------GGSMAPNCGTVGNKTRIRWTQDLHEKFV 217

Query: 91  NCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHIRDFSKGKSER-ETDKE 150
            CV++LGG  KATPK +L LM +EGLT+ H+KSHLQKYRI+++I D+ +GK E+    KE
Sbjct: 218 ECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYIPDYQEGKFEKGSCSKE 277

Query: 151 LMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMKQLRGVLERRGK 206
           L   +   G Q+ EA +  L  Q  L+EQLE+Q+NL   IEEQ KQL+ ++E++ K
Sbjct: 278 LSQLDTKTGVQIKEALQLQLDVQRHLHEQLEIQRNLQLRIEEQGKQLKIMIEQQQK 324

[Close]
BLAST of Cp4.1LG03g09110 vs. TrEMBL
Match: A0A087G5B6_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G062300 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-25
Identity = 68/134 (50.75%), Postives = 97/134 (72.39%), Query Frame = 1 

Query: 73  IGSKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQ 132
           IG+K RI+WT++LH+KF+ CV++LGG  KATPK +L LM +EGLT+ H+KSHLQKYRI++
Sbjct: 98  IGNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRIAK 157

Query: 133 HIRDFSKGK-SERETDKELMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEE 192
           +I +  +GK  +R   KEL   +   G Q+ EA +  L  Q  L+EQLE+Q+NL   IEE
Sbjct: 158 YIPESQEGKFVKRACGKELSQLDTKTGMQIKEALQLQLDVQRHLHEQLEIQRNLQLRIEE 217

Query: 193 QMKQLRGVLERRGK 206
           Q KQL+ ++E++ K
Sbjct: 218 QGKQLKIMMEQQQK 231

[Close]
BLAST of Cp4.1LG03g09110 vs. TrEMBL
Match: A0A0D3B019_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-25
Identity = 69/133 (51.88%), Postives = 95/133 (71.43%), Query Frame = 1 

Query: 74  GSKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQH 133
           G+K RI+WT++LH KF+ CV++LGG  KATPK +L LM +EGLT+ H+KSHLQKYRI+++
Sbjct: 190 GNKTRIRWTQDLHDKFLECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKY 249

Query: 134 IRDFSKGKSE-RETDKELMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQ 193
           I D  +GK E R   KEL   +   G Q+ EA +  L  Q  L+EQLE+Q+NL   IEEQ
Sbjct: 250 IPDPREGKFEKRSCSKELSQLDTKTGVQIKEALQLQLDVQRHLHEQLEIQRNLQVRIEEQ 309

Query: 194 MKQLRGVLERRGK 206
            KQL+ ++E++ K
Sbjct: 310 GKQLKLMIEQQQK 322

[Close]
BLAST of Cp4.1LG03g09110 vs. TAIR10
Match: AT5G06800.1 (AT5G06800.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-26
Identity = 64/132 (48.48%), Postives = 94/132 (71.21%), Query Frame = 1 

Query: 75  SKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHI 134
           +K RI+WT++LH+KF+ CV++LGG  KATPK +L  M ++GLT+ H+KSHLQKYRI++++
Sbjct: 191 NKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYM 250

Query: 135 RDFSKGKSE-RETDKELMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQM 194
            +  +GK E R   KEL   +   G Q+ EA +  L  Q  L+EQLE+Q+NL   IEEQ 
Sbjct: 251 PESQEGKFEKRACAKELSQLDTRTGVQIKEALQLQLDVQRHLHEQLEIQRNLQLRIEEQG 310

Query: 195 KQLRGVLERRGK 206
           KQL+ ++E++ K
Sbjct: 311 KQLKMMMEQQQK 322

[Close]
BLAST of Cp4.1LG03g09110 vs. TAIR10
Match: AT2G01060.1 (AT2G01060.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.5e-22
Identity = 59/145 (40.69%), Postives = 92/145 (63.45%), Query Frame = 1 

Query: 62  MGNENKKSKSRIGSKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHI 121
           M  +N    S   SK+R++WT ELH++F++ V QLGG  +ATPK +L +M  +GLT+ H+
Sbjct: 1   MEADNGGPNSSHASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHV 60

Query: 122 KSHLQKYRISQHIRDFS---KGKSERETDKELMLANQNRGKQLVEAARQLLATQSSLNEQ 181
           KSHLQKYR+++++ D S   K   ++E+   L   + + G Q+ EA +  +  Q  L+EQ
Sbjct: 61  KSHLQKYRLAKYLPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQKRLHEQ 120

Query: 182 LEVQKNLISAIEEQMKQLRGVLERR 204
           LEVQ+ L   IE Q K L+ ++E +
Sbjct: 121 LEVQRQLQLRIEAQGKYLKKIIEEQ 145

[Close]
BLAST of Cp4.1LG03g09110 vs. TAIR10
Match: AT3G04450.1 (AT3G04450.1 Homeodomain-like superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-20
Identity = 55/147 (37.41%), Postives = 92/147 (62.59%), Query Frame = 1 

Query: 64  NENKKSKSRIGSKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKS 123
           N      S + SK+R++WT ELH+ F+  ++QLGG+ +ATPK +L L+ + GLT+ H+KS
Sbjct: 226 NAKSPPASSMTSKQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVYHVKS 285

Query: 124 HLQKYRISQHIRDFSKGKSE-----RETDKELMLANQNRGKQLVEAARQLLATQSSLNEQ 183
           HLQKYR +++  + SK   E      +T +++   +     ++ EA R  +  Q  L+EQ
Sbjct: 286 HLQKYRTARYKPELSKDTEEPLVKNLKTIEDIKSLDLKTSIEITEALRLQMKVQKQLHEQ 345

Query: 184 LEVQKNLISAIEEQMKQLRGVLERRGK 206
           LE+Q++L   IEEQ + L+ ++E++ K
Sbjct: 346 LEIQRSLQLQIEEQGRYLQMMIEKQQK 372

[Close]
BLAST of Cp4.1LG03g09110 vs. TAIR10
Match: AT4G28610.1 (AT4G28610.1 phosphate starvation response 1)

HSP 1 Score: 95.1 bits (235), Expect = 5.5e-20
Identity = 61/148 (41.22%), Postives = 91/148 (61.49%), Query Frame = 1 

Query: 60  ELMGNENKKSKSRIGS-KKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTL 119
           EL       S S  G+ K R++WT ELH+ F+  V+ LGG+ +ATPK +L +MK EGLT+
Sbjct: 208 ELRPVSTTSSNSNNGTGKARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTI 267

Query: 120 IHIKSHLQKYRISQHIRDFSK-GKSERETD--KELMLANQNRGKQLVEAARQLLATQSSL 179
            H+KSHLQKYR +++  + S+ G  ER+    + +   +   G  + EA R  +  Q  L
Sbjct: 268 YHVKSHLQKYRTARYRPEPSETGSPERKLTPLEHITSLDLKGGIGITEALRLQMEVQKQL 327

Query: 180 NEQLEVQKNLISAIEEQMKQLRGVLERR 204
           +EQLE+Q+NL   IEEQ K L+ + E++
Sbjct: 328 HEQLEIQRNLQLRIEEQGKYLQMMFEKQ 355

[Close]
BLAST of Cp4.1LG03g09110 vs. TAIR10
Match: AT3G13040.1 (AT3G13040.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 94.7 bits (234), Expect = 7.2e-20
Identity = 58/142 (40.85%), Postives = 84/142 (59.15%), Query Frame = 1 

Query: 71  SRIGSKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRI 130
           S    K R++WT ELH+ F+  V +L G  KATPK +  LM  EGLT+ H+KSHLQKYR+
Sbjct: 236 SAANQKSRMRWTPELHESFVKAVIKLEGPEKATPKAVKKLMNVEGLTIYHVKSHLQKYRL 295

Query: 131 SQHIRDFSKGK-SERETDKELMLANQNRGK------QLVEAARQLLATQSSLNEQLEVQK 190
           ++++ +  + K ++   +K+L L+     +      QL EA R  +  Q  L+EQLEVQ+
Sbjct: 296 AKYMPEKKEEKRTDNSEEKKLALSKSEADEKKKGAIQLTEALRMQMEVQKQLHEQLEVQR 355

Query: 191 NLISAIEEQMKQLRGVLERRGK 206
            L   IEE  K L  +LE + K
Sbjct: 356 VLQLRIEEHAKYLEKMLEEQRK 377

[Close]
BLAST of Cp4.1LG03g09110 vs. NCBI nr
Match: gi|778688763|ref|XP_011652834.1| (PREDICTED: protein PHR1-LIKE 1-like [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 7.9e-61
Identity = 143/203 (70.44%), Postives = 158/203 (77.83%), Query Frame = 1 

Query: 1   GCETFSEAESSFVSTNTEDDQPHLHFSSFTFDSSKHQGEAQEQSSCCQEFSGD-CSWSWE 60
           GC+TFSE ESSF S+NT D   H   SS +F S   Q EAQ QS+C QEF G+ CSWS E
Sbjct: 29  GCQTFSEVESSFASSNTNDRHHHFLISS-SFHSPNPQ-EAQHQSNCSQEFDGENCSWSCE 88

Query: 61  ELMG-NENKKSKSRIGSKKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTL 120
           ELM  N NKK KS I SK RIKWTEELHQ+F NCVDQLGG +KATPKQL HLMKT+GLTL
Sbjct: 89  ELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQKATPKQLFHLMKTKGLTL 148

Query: 121 IHIKSHLQKYRISQHIRDFSKGKSERETD-KELMLANQNRGKQLVEAARQLLATQSSLNE 180
           IHIKSHLQKYRISQ I++ SKGKSER+ + KE M  +QN GKQL+E  RQ L  QSSLNE
Sbjct: 149 IHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQNIGKQLMEVVRQQLHAQSSLNE 208

Query: 181 QLEVQKNLISAIEEQMKQLRGVL 201
           QL+VQK LISAIEEQMKQLRG L
Sbjct: 209 QLKVQKKLISAIEEQMKQLRGNL 229

[Close]
BLAST of Cp4.1LG03g09110 vs. NCBI nr
Match: gi|700203488|gb|KGN58621.1| (hypothetical protein Csa_3G702590 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 3.1e-33
Identity = 89/134 (66.42%), Postives = 98/134 (73.13%), Query Frame = 1 

Query: 1   GCETFSEAESSFVSTNTEDDQPHLHFSSFTFDSSKHQGEAQEQSSCCQEFSGD-CSWSWE 60
           GC+TFSE ESSF S+NT D   H   SS +F S   Q EAQ QS+C QEF G+ CSWS E
Sbjct: 29  GCQTFSEVESSFASSNTNDRHHHFLISS-SFHSPNPQ-EAQHQSNCSQEFDGENCSWSCE 88

Query: 61  ELMG-NENKKSKSRIGSKKRIKWTEELHQKFMNCVDQLGGTR------KATPKQLLHLMK 120
           ELM  N NKK KS I SK RIKWTEELHQ+F NCVDQLGG +      +ATPKQL HLMK
Sbjct: 89  ELMPINRNKKLKSSIVSKTRIKWTEELHQRFTNCVDQLGGAQMFVASAEATPKQLFHLMK 148

Query: 121 TEGLTLIHIKSHLQ 127
           T+GLTLIHIKSHLQ
Sbjct: 149 TKGLTLIHIKSHLQ 160

[Close]
BLAST of Cp4.1LG03g09110 vs. NCBI nr
Match: gi|923896513|ref|XP_013718925.1| (PREDICTED: transcription repressor KAN1-like isoform X1 [Brassica napus])

HSP 1 Score: 126.7 bits (317), Expect = 4.9e-26
Identity = 76/176 (43.18%), Postives = 108/176 (61.36%), Query Frame = 1 

Query: 31  FDSSKHQGEAQEQSSCCQEFSGDCSWSWEELMGNENKKSKSRIGSKKRIKWTEELHQKFM 90
           F SS HQ +          FS           G     +   +G+K RI+WT++LH+KF+
Sbjct: 159 FSSSHHQAKQTHPRFSSHSFSAH---------GGSMAPNCGTVGNKTRIRWTQDLHEKFV 218

Query: 91  NCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHIRDFSKGKSER-ETDKE 150
            CV++LGG  KATPK +L LM +EGLT+ H+KSHLQKYRI+++I D+ +GK E+    KE
Sbjct: 219 ECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYIPDYQEGKFEKGSCSKE 278

Query: 151 LMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMKQLRGVLERRGK 206
           L   +   G Q+ EA +  L  Q  L+EQLE+Q+NL   IEEQ KQL+ ++E++ K
Sbjct: 279 LSQLDTKTGVQIKEALQLQLDVQRHLHEQLEIQRNLQLRIEEQGKQLKIMIEQQQK 325

[Close]
BLAST of Cp4.1LG03g09110 vs. NCBI nr
Match: gi|923896517|ref|XP_013718928.1| (PREDICTED: transcription repressor KAN1-like isoform X3 [Brassica napus])

HSP 1 Score: 126.7 bits (317), Expect = 4.9e-26
Identity = 76/176 (43.18%), Postives = 108/176 (61.36%), Query Frame = 1 

Query: 31  FDSSKHQGEAQEQSSCCQEFSGDCSWSWEELMGNENKKSKSRIGSKKRIKWTEELHQKFM 90
           F SS HQ +          FS           G     +   +G+K RI+WT++LH+KF+
Sbjct: 158 FSSSHHQAKQTHPRFSSHSFSAH---------GGSMAPNCGTVGNKTRIRWTQDLHEKFV 217

Query: 91  NCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHIRDFSKGKSER-ETDKE 150
            CV++LGG  KATPK +L LM +EGLT+ H+KSHLQKYRI+++I D+ +GK E+    KE
Sbjct: 218 ECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYIPDYQEGKFEKGSCSKE 277

Query: 151 LMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMKQLRGVLERRGK 206
           L   +   G Q+ EA +  L  Q  L+EQLE+Q+NL   IEEQ KQL+ ++E++ K
Sbjct: 278 LSQLDTKTGVQIKEALQLQLDVQRHLHEQLEIQRNLQLRIEEQGKQLKIMIEQQQK 324

[Close]
BLAST of Cp4.1LG03g09110 vs. NCBI nr
Match: gi|685269331|ref|XP_009125662.1| (PREDICTED: transcription repressor KAN1-like [Brassica rapa])

HSP 1 Score: 126.7 bits (317), Expect = 4.9e-26
Identity = 76/176 (43.18%), Postives = 108/176 (61.36%), Query Frame = 1 

Query: 31  FDSSKHQGEAQEQSSCCQEFSGDCSWSWEELMGNENKKSKSRIGSKKRIKWTEELHQKFM 90
           F SS HQ +          FS           G     +   +G+K RI+WT++LH+KF+
Sbjct: 158 FSSSHHQAKQTHPRFSSHSFSAH---------GGSMAPNCGTVGNKTRIRWTQDLHEKFV 217

Query: 91  NCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRISQHIRDFSKGKSER-ETDKE 150
            CV++LGG  KATPK +L LM +EGLT+ H+KSHLQKYRI+++I D+ +GK E+    KE
Sbjct: 218 ECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRIAKYIPDYQEGKFEKGSCSKE 277

Query: 151 LMLANQNRGKQLVEAARQLLATQSSLNEQLEVQKNLISAIEEQMKQLRGVLERRGK 206
           L   +   G Q+ EA +  L  Q  L+EQLE+Q+NL   IEEQ KQL+ ++E++ K
Sbjct: 278 LSQLDTKTGVQIKEALQLQLDVQRHLHEQLEIQRNLQLRIEEQGKQLKIMIEQQQK 324

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g09110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PHL5_ARATH2.4e-2548.48Myb family transcription factor PHL5 OS=Arabidopsis thaliana GN=PHL5 PE=2 SV=1[more]
PHR1_ORYSI8.6e-2344.27Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. indica GN=PHR1 PE... [more]
PHR1_ORYSJ8.6e-2344.27Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa subsp. japonica GN=PHR1 ... [more]
PHR3_ORYSI4.7e-2139.88Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica GN=PHR3 PE... [more]
PHR3_ORYSJ4.7e-2139.88Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica GN=PHR3 ... [more]
BLAST of Cp4.1LG03g09110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEY1_CUCSA2.2e-3366.42Uncharacterized protein OS=Cucumis sativus GN=Csa_3G702590 PE=4 SV=1[more]
M4EIV2_BRARP3.4e-2643.18Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A078EWN6_BRANA3.4e-2643.18BnaAnng01860D protein OS=Brassica napus GN=BnaAnng01860D PE=4 SV=1[more]
A0A087G5B6_ARAAL1.3e-2550.75Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G062300 PE=4 SV=1[more]
A0A0D3B019_BRAOL1.3e-2551.88Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
BLAST of Cp4.1LG03g09110 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G06800.11.4e-2648.48 myb-like HTH transcriptional regulator family protein[more]
AT2G01060.14.5e-2240.69 myb-like HTH transcriptional regulator family protein[more]
AT3G04450.11.9e-2037.41 Homeodomain-like superfamily protein[more]
AT4G28610.15.5e-2041.22 phosphate starvation response 1[more]
AT3G13040.17.2e-2040.85 myb-like HTH transcriptional regulator family protein[more]
BLAST of Cp4.1LG03g09110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778688763|ref|XP_011652834.1|7.9e-6170.44PREDICTED: protein PHR1-LIKE 1-like [Cucumis sativus][more]
gi|700203488|gb|KGN58621.1|3.1e-3366.42hypothetical protein Csa_3G702590 [Cucumis sativus][more]
gi|923896513|ref|XP_013718925.1|4.9e-2643.18PREDICTED: transcription repressor KAN1-like isoform X1 [Brassica napus][more]
gi|923896517|ref|XP_013718928.1|4.9e-2643.18PREDICTED: transcription repressor KAN1-like isoform X3 [Brassica napus][more]
gi|685269331|ref|XP_009125662.1|4.9e-2643.18PREDICTED: transcription repressor KAN1-like [Brassica rapa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR025756Myb_CC_LHEQLE
IPR017930Myb_dom
IPR009057Homeobox-like_sf
IPR006447Myb_dom_plants
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g09110.1Cp4.1LG03g09110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 80..129
score: 4.
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 76..131
score: 4.2
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 75..131
score: 1.3
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 75..132
score: 2.15
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 73..133
score: 13
IPR025756MYB-CC type transcription factor, LHEQLE-containing domainPFAMPF14379Myb_CC_LHEQLEcoord: 162..203
score: 9.
NoneNo IPR availableunknownCoilCoilcoord: 162..199
scor
NoneNo IPR availablePANTHERPTHR31314FAMILY NOT NAMEDcoord: 75..201
score: 2.0
NoneNo IPR availablePANTHERPTHR31314:SF7MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEINcoord: 75..201
score: 2.0