Cucsa.177630 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.177630
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Chloroplast 40 kDa outer membrane envelope protein
Location	scaffold01225 : 1597880 .. 1598773 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCTTCCCTCATCTTCCGTGAAGATCAAAACCTTAGTTTCAGAGCCAAAATCCCTCTTAATTTCTTCGGGTTACCCTTCCGTTCCTCCGTTCATCTTCCAGATTCCGACAATCTCTCCTTCACCTTCGCCACTTTCTTCAGATCCGGCCCTTCCTTCAACCTCTCTTACCGTCCCAATCAAGCTCTCAACCCCTTCTCTCTCGCCATCAAGGCCGGAATTGGACTCTTCGGCTCACCCATTGACTCTCCCATGACTTTCGCCGCCGAATTCAACCTTCCAGCTAATCAACCCCcTCGCTTCTTCCTTCACTTCAGACCTCAACTCGGCGATTTCACTCTCCGTAGATCCGTCCAATCGAACATTACGAATTTCAAGTTGCCCTACCGAAACTTGATTTCGCAAGTCGATGACGATGTTTCTGCTTTCACTAGAGGTAAATCCGTCGTTGGCCCCGAAACTCCTGACCTAGGGCTTGGAAATCCGGTCCTATCCAGTCAGAGAATCGATTTCTCTGAGGCACTCAATCGTGTCGATGATGTGCTCTCGACTATGGAGATTAATGCCAGATCGACGTTTAAGGTTGGAGACTCAACAGCGGTGAAATTCCGATGGAGCATGACGTTTCCGACGTGCATGAAGAAGGATGAGTTCACGGCCAAAGCTCCACTCTCCAAAATGCCATATCTAGCATTGGGAAAGATCAAAATCGAACGCGCGGCTGCCAGTGAGAGCGAACGAGAAAGCAATAAGGCTGCCGGAGCAGGAGAGTTTTCAGGTTTGAAGAAGCATTTGGAGGATTTATGGAAAGAAAGCCGATGGTTGAAGAAGAATATAGAGCAACTTCAGTCGGAGATCGGTGAACAGAAGGCTGCACCGTCGACTCCGCCG

mRNA sequence

ATGAAAGCTTCCCTCATCTTCCGTGAAGATCAAAACCTTAGTTTCAGAGCCAAAATCCCTCTTAATTTCTTCGGGTTACCCTTCCGTTCCTCCGTTCATCTTCCAGATTCCGACAATCTCTCCTTCACCTTCGCCACTTTCTTCAGATCCGGCCCTTCCTTCAACCTCTCTTACCGTCCCAATCAAGCTCTCAACCCCTTCTCTCTCGCCATCAAGGCCGGAATTGGACTCTTCGGCTCACCCATTGACTCTCCCATGACTTTCGCCGCCGAATTCAACCTTCCAGCTAATCAACCCCCTCGCTTCTTCCTTCACTTCAGACCTCAACTCGGCGATTTCACTCTCCGTAGATCCGTCCAATCGAACATTACGAATTTCAAGTTGCCCTACCGAAACTTGATTTCGCAAGTCGATGACGATGTTTCTGCTTTCACTAGAGGTAAATCCGTCGTTGGCCCCGAAACTCCTGACCTAGGGCTTGGAAATCCGGTCCTATCCAGTCAGAGAATCGATTTCTCTGAGGCACTCAATCGTGTCGATGATGTGCTCTCGACTATGGAGATTAATGCCAGATCGACGTTTAAGGTTGGAGACTCAACAGCGGTGAAATTCCGATGGAGCATGACGTTTCCGACGTGCATGAAGAAGGATGAGTTCACGGCCAAAGCTCCACTCTCCAAAATGCCATATCTAGCATTGGGAAAGATCAAAATCGAACGCGCGGCTGCCAGTGAGAGCGAACGAGAAAGCAATAAGGCTGCCGGAGCAGGAGAGTTTTCAGGTTTGAAGAAGCATTTGGAGGATTTATGGAAAGAAAGCCGATGGTTGAAGAAGAATATAGAGCAACTTCAGTCGGAGATCGGTGAACAGAAGGCTGCACCGTCGACTCCGCCG

Coding sequence (CDS)

ATGAAAGCTTCCCTCATCTTCCGTGAAGATCAAAACCTTAGTTTCAGAGCCAAAATCCCTCTTAATTTCTTCGGGTTACCCTTCCGTTCCTCCGTTCATCTTCCAGATTCCGACAATCTCTCCTTCACCTTCGCCACTTTCTTCAGATCCGGCCCTTCCTTCAACCTCTCTTACCGTCCCAATCAAGCTCTCAACCCCTTCTCTCTCGCCATCAAGGCCGGAATTGGACTCTTCGGCTCACCCATTGACTCTCCCATGACTTTCGCCGCCGAATTCAACCTTCCAGCTAATCAACCCCcTCGCTTCTTCCTTCACTTCAGACCTCAACTCGGCGATTTCACTCTCCGTAGATCCGTCCAATCGAACATTACGAATTTCAAGTTGCCCTACCGAAACTTGATTTCGCAAGTCGATGACGATGTTTCTGCTTTCACTAGAGGTAAATCCGTCGTTGGCCCCGAAACTCCTGACCTAGGGCTTGGAAATCCGGTCCTATCCAGTCAGAGAATCGATTTCTCTGAGGCACTCAATCGTGTCGATGATGTGCTCTCGACTATGGAGATTAATGCCAGATCGACGTTTAAGGTTGGAGACTCAACAGCGGTGAAATTCCGATGGAGCATGACGTTTCCGACGTGCATGAAGAAGGATGAGTTCACGGCCAAAGCTCCACTCTCCAAAATGCCATATCTAGCATTGGGAAAGATCAAAATCGAACGCGCGGCTGCCAGTGAGAGCGAACGAGAAAGCAATAAGGCTGCCGGAGCAGGAGAGTTTTCAGGTTTGAAGAAGCATTTGGAGGATTTATGGAAAGAAAGCCGATGGTTGAAGAAGAATATAGAGCAACTTCAGTCGGAGATCGGTGAACAGAAGGCTGCACCGTCGACTCCGCCG

Protein sequence

MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRPNQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQSNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVDDVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKDEFTAKAPLSKMPYLALGKIKIERAAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQLQSEIGEQKAAPSTPP

Homology

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BLAST of Cucsa.177630 vs. TrEMBL
Match: A0A0A0LD41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G702600 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 2.7e-167
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1


Query: 1   MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP 60
           MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP
Sbjct: 1   MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP 60

Query: 61  NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ 120
           NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ
Sbjct: 61  NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ 120

Query: 121 SNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVD 180
           SNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVD
Sbjct: 121 SNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVD 180

Query: 181 DVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKDEFTAKAPLSKMPYLALGKIKIER 240
           DVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKDEFTAKAPLSKMPYLALGKIKIER
Sbjct: 181 DVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKDEFTAKAPLSKMPYLALGKIKIER 240

Query: 241 AAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQLQSEIGEQKAAPSTPP 299
           AAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQLQSEIGEQKAAPSTPP
Sbjct: 241 AAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQLQSEIGEQKAAPSTPP 298

[Close]

BLAST of Cucsa.177630 vs. TrEMBL
Match: A5AP97_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024455 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.9e-43
Identity = 118/312 (37.82%), Postives = 162/312 (51.92%), Query Frame = 1


Query: 1   MKASLIFREDQNLS-FRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYR 60
           MKAS+ FRED+    FRAK+ LN  G PFR  V   D+ +L F  +TFF SGP    SYR
Sbjct: 2   MKASVKFREDEKKPLFRAKVALNILGFPFRYGVEAGDATDLRFNLSTFFESGPLIKFSYR 61

Query: 61  PNQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSV 120
            N +L PF++A+K GIG FGSPI +P+  AAEFNL     P FF+HFRPQ+GDF+++RS+
Sbjct: 62  HNDSLTPFAVAVKTGIGRFGSPIGAPIAMAAEFNLLGTGSPSFFIHFRPQIGDFSIKRSM 121

Query: 121 QSNIT----------NFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQR 180
           QS I            FK P      +VD  V                     P  + +R
Sbjct: 122 QSQIALPPQSSIFTPKFKAPADGADLEVDGSVD----------------DAEPPGATGKR 181

Query: 181 IDFSEALNRVDDVLSTMEINARSTFKVGDSTAVKFRWSMTF-----PTCMKKDEFTAKAP 240
           I F      +D V S +E++A +  ++ +   +K RW++ F     PTC   +     A 
Sbjct: 182 ISFPVG-KVIDSVFSGVELSAGTAVRLMNRAVLKLRWNLKFPAEFKPTCAGDNITNQTAG 241

Query: 241 LS--KMPYLALGKIKIERAAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQ 295
           +S  K P+L L KI IE  AA  S   S   AG      +K+ L+ L  ++  L+K I +
Sbjct: 242 ISGDKAPFLVLSKIGIEHVAADNSPHSSTGVAGT--CLSMKRELDALRAQNESLRKGIAE 294

[Close]

BLAST of Cucsa.177630 vs. TrEMBL
Match: F6HPT9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00330 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.9e-43
Identity = 118/312 (37.82%), Postives = 162/312 (51.92%), Query Frame = 1


Query: 1   MKASLIFREDQNLS-FRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYR 60
           MKAS+ FRED+    FRAK+ LN  G PFR  V   D+ +L F  +TFF SGP    SYR
Sbjct: 1   MKASVKFREDEKKPLFRAKVALNILGFPFRYGVEAGDATDLRFNLSTFFESGPLIKFSYR 60

Query: 61  PNQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSV 120
            N +L PF++A+K GIG FGSPI +P+  AAEFNL     P FF+HFRPQ+GDF+++RS+
Sbjct: 61  HNDSLTPFAVAVKTGIGRFGSPIGAPIAMAAEFNLLGTGSPSFFIHFRPQIGDFSIKRSM 120

Query: 121 QSNIT----------NFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQR 180
           QS I            FK P      +VD  V                     P  + +R
Sbjct: 121 QSQIALPPQSSIFTPKFKAPADGADLEVDGSVD----------------DAEPPGATGKR 180

Query: 181 IDFSEALNRVDDVLSTMEINARSTFKVGDSTAVKFRWSMTF-----PTCMKKDEFTAKAP 240
           I F      +D V S +E++A +  ++ +   +K RW++ F     PTC   +     A 
Sbjct: 181 ISFPVG-KVIDSVFSGVELSAGTAVRLMNRAVLKLRWNLKFPAEFKPTCAGDNITNQTAG 240

Query: 241 LS--KMPYLALGKIKIERAAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQ 295
           +S  K P+L L KI IE  AA  S   S   AG      +K+ L+ L  ++  L+K I +
Sbjct: 241 ISGDKAPFLVLSKIGIEHVAADNSPHSSTGVAGT--CLSMKRELDALRAQNESLRKGIAE 293

[Close]

BLAST of Cucsa.177630 vs. TrEMBL
Match: U5GE46_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s20610g PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.5e-43
Identity = 123/315 (39.05%), Postives = 165/315 (52.38%), Query Frame = 1


Query: 1   MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP 60
           MKASL FRE+QN  FRAK+PL+  GLPF+S +   +S  LS   +TFF SGPSF  SYRP
Sbjct: 1   MKASLKFREEQNPLFRAKVPLSIIGLPFQSGIIAGESKELSLNLSTFFESGPSFKFSYRP 60

Query: 61  NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPA------NQPPRFFLHFRPQLGDFT 120
           N   NPFSL IK G G FGSP+ S M  +AEFNL        N  P F LHF+PQ GDF+
Sbjct: 61  NDTWNPFSLVIKTGTGPFGSPVSSSMIMSAEFNLLGKGSNNNNLNPSFMLHFKPQFGDFS 120

Query: 121 LRRS-VQSNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDL--GLGNPVLSSQRID 180
           +++S   S++++     +N     DDD S       VV P +P+    + N +   +RI 
Sbjct: 121 IKKSQSSSHVSHVTRSIQNGGVSSDDDGSV-----EVVEPASPNTTPAVANGMFYGKRIA 180

Query: 181 FSEAL--NRVDDVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMK--KDEFTAKAPLSK 240
               +  + V  V S +E+ AR+   V     V FRW +  P  +K    E TA     K
Sbjct: 181 VLPPVTASAVAGVFSGLEVAARTKLPVRSRAVVNFRWGVRVPAEIKSGSGESTAGINFRK 240

Query: 241 MPYLALGKIKIERA--AASESERESNKAAGAGEFS---------GLKKHLEDLWKESRWL 292
           +P+L + K+ IE        S++E        EF          G+K+ LE L  E+  L
Sbjct: 241 IPFLVMNKVGIEHVDDGDGRSKKEGTTGKVGMEFGNSDVAEACLGVKRQLEILQSENGHL 300

[Close]

BLAST of Cucsa.177630 vs. TrEMBL
Match: A0A087GYS2_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G224200 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.5e-43
Identity = 114/291 (39.18%), Postives = 167/291 (57.39%), Query Frame = 1


Query: 1   MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP 60
           MKAS+ FRE+Q   FRAK+PL+  GLPF+S +   +S  LS   +TFF SGPS  ++YRP
Sbjct: 1   MKASMKFREEQKPLFRAKVPLSILGLPFQSGIVAGESKELSLNLSTFFESGPSLKVAYRP 60

Query: 61  NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ 120
           N + NPFSL +K G G FGSPI S M  +AEFNL     P F LHF+PQ GDF++++S  
Sbjct: 61  NDSYNPFSLIVKTGTGSFGSPISSSMLMSAEFNLLGQGNPSFMLHFKPQFGDFSIKKSHS 120

Query: 121 SNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVD 180
           S+  N      NLI+ V+  VS       VV  ++P +G G        I  S +   + 
Sbjct: 121 SSGIN-----TNLINSVNGSVSEDDASVEVV--DSP-IGGG---FRKVTILPSTSAGDIA 180

Query: 181 DVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKD-EFTAKAPLSKMPYLALGKIKIE 240
            +LS +E+ AR++  V     V FRW +  PT +++D + TA   L + P+L + KI IE
Sbjct: 181 GLLSGVEVAARTSLPVRGKAVVNFRWGVRVPTEIRRDFDPTAAISLRRFPFLVMNKIGIE 240

Query: 241 RAAASESERESNKAA--GAGEFSGL-KKHLEDLWKESRWLKKNIEQLQSEI 288
              A E   +  + +  G G+ + +  K +E+L  E+R LK++++ L+  I
Sbjct: 241 HVDAKEIRSDPGQVSDPGRGDVAEVCLKQMEELRLENRQLKRSVDDLREVI 280

[Close]

BLAST of Cucsa.177630 vs. TAIR10
Match: AT3G57990.1 (AT3G57990.1 unknown protein)

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-45
Identity = 113/306 (36.93%), Postives = 172/306 (56.21%), Query Frame = 1


Query: 1   MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP 60
           MKAS+ FRE+Q   FRAK+PL+  GLPF+S +   +S  LS   +TFF SGPS  ++YRP
Sbjct: 1   MKASMKFREEQKPLFRAKVPLSILGLPFQSGIVAGESKELSLNLSTFFESGPSLKVAYRP 60

Query: 61  NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ 120
           N + NPFSL +K G G FGSPI S M  +AEFNL     P F LHF+PQ GDF++++S  
Sbjct: 61  NDSWNPFSLIVKTGSGSFGSPISSSMLMSAEFNLLGQGNPSFMLHFKPQFGDFSIKKSHS 120

Query: 121 SNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVD 180
           S  + F+   RNLI  ++  VS       VV  +TP +           +  S +   + 
Sbjct: 121 S--SGFE---RNLIKSMNGSVSEDDSSIEVV--DTPAVNGCGGGFRKVTVLPSTSAGDIA 180

Query: 181 DVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKD-EFTAKAPLSKMPYLALGKIKIE 240
            +LS +E+ AR++  V     + FRW +  PT +++D + TA   L + P+L + KI IE
Sbjct: 181 GLLSGVEVAARTSLPVRGRAVLNFRWGVRVPTEIRRDFDPTAAISLRRFPFLVMNKIGIE 240

Query: 241 R-----AAASESERESNKAAGAGEFS---GLKKHLEDLWKESRWLKKNIEQLQSEIGEQK 297
                 A  ++S  +  K +G  +F+    + + +E+L  E++ LK+ +E L+  I   +
Sbjct: 241 HVDGADAKVTKSTGDPGKVSGPAQFTTSGDVAEVIEELRTENKQLKRAVEDLREVISNVR 299

[Close]

BLAST of Cucsa.177630 vs. NCBI nr
Match: gi|778688767|ref|XP_011652835.1| (PREDICTED: uncharacterized protein LOC105435123 [Cucumis sativus])

HSP 1 Score: 595.9 bits (1535), Expect = 3.9e-167
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1


Query: 1   MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP 60
           MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP
Sbjct: 1   MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP 60

Query: 61  NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ 120
           NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ
Sbjct: 61  NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ 120

Query: 121 SNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVD 180
           SNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVD
Sbjct: 121 SNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVD 180

Query: 181 DVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKDEFTAKAPLSKMPYLALGKIKIER 240
           DVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKDEFTAKAPLSKMPYLALGKIKIER
Sbjct: 181 DVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKDEFTAKAPLSKMPYLALGKIKIER 240

Query: 241 AAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQLQSEIGEQKAAPSTPP 299
           AAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQLQSEIGEQKAAPSTPP
Sbjct: 241 AAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQLQSEIGEQKAAPSTPP 298

[Close]

BLAST of Cucsa.177630 vs. NCBI nr
Match: gi|659123890|ref|XP_008461888.1| (PREDICTED: uncharacterized protein LOC103500380 [Cucumis melo])

HSP 1 Score: 533.5 bits (1373), Expect = 2.4e-148
Identity = 263/298 (88.26%), Postives = 275/298 (92.28%), Query Frame = 1


Query: 1   MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP 60
           MKAS+IFREDQNL+F AKIPL FFGLPFRS+++LPDSDNLSFTFATFFRSGPSFNLSYRP
Sbjct: 1   MKASIIFREDQNLTFTAKIPLCFFGLPFRSAIYLPDSDNLSFTFATFFRSGPSFNLSYRP 60

Query: 61  NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ 120
           N ALNPFSLA+KAGIGLFGSPIDSPMTFAAEFNLP NQPPRFFLHFRPQLGDFTLRRSVQ
Sbjct: 61  NHALNPFSLALKAGIGLFGSPIDSPMTFAAEFNLPGNQPPRFFLHFRPQLGDFTLRRSVQ 120

Query: 121 SNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVD 180
           S I  F  PYRNLISQVDDD SA +RGKS+ GPETPDLGLGNPVLSSQRID SE  NRVD
Sbjct: 121 SGIAIFNFPYRNLISQVDDDASALSRGKSIDGPETPDLGLGNPVLSSQRIDCSEVFNRVD 180

Query: 181 DVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKDEFTAKAPLSKMPYLALGKIKIER 240
           DV STMEINARSTFKVGDSTAVKFRWSM FPT M KD FTAKAPLSKMPYLALGKIKIER
Sbjct: 181 DVFSTMEINARSTFKVGDSTAVKFRWSMRFPTSMNKDGFTAKAPLSKMPYLALGKIKIER 240

Query: 241 AAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQLQSEIGEQKAAPSTPP 299
           AAASE ERESN+A GAGEFSG+KKHLEDLWKESRWLKKN+EQLQSEIGEQKA P+TPP
Sbjct: 241 AAASEGERESNEAGGAGEFSGMKKHLEDLWKESRWLKKNVEQLQSEIGEQKAGPTTPP 298

[Close]

BLAST of Cucsa.177630 vs. NCBI nr
Match: gi|720005867|ref|XP_010257793.1| (PREDICTED: uncharacterized protein LOC104597767 [Nelumbo nucifera])

HSP 1 Score: 197.6 bits (501), Expect = 3.1e-47
Identity = 122/323 (37.77%), Postives = 175/323 (54.18%), Query Frame = 1


Query: 1   MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP 60
           MKASL FREDQ   FRAK+PL+  GLPF+SS+   DS  L     T F  GPSF ++YRP
Sbjct: 1   MKASLKFREDQKPLFRAKVPLSVLGLPFQSSISAGDSKELCLNLGTLFERGPSFRIAYRP 60

Query: 61  NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ 120
           N + NPFS+ +K GIG FGSPI +PMT +AEFNL  +  P F++ F+P++GDF++++S  
Sbjct: 61  NDSWNPFSIVVKTGIGSFGSPISAPMTMSAEFNLLGHGNPSFYIQFKPRIGDFSIKKSTS 120

Query: 121 SNITNFKLP--YRNLIS----QVDDDVSAFTRGKSVV---GPETPDLGLGNPVLSSQRID 180
           S+I+    P  + + I      VD +V     G  V    G   P+ G+      +  + 
Sbjct: 121 SHISLSSQPSVFGSKIKPNGMNVDSEVEDSGLGGEVPIANGTYRPENGVFFHKKINGLLP 180

Query: 181 FSEALNRVDDVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKK-------DEFTAKAP 240
            + A N +D + S +E +A +   V +   +KFRW + FP  ++          FT +  
Sbjct: 181 ETHATNAIDGLFSGLEFSASTVLPVRNRALLKFRWGLKFPPELRAAFIEDGIASFTDRIS 240

Query: 241 LSKMPYLALGKIKIERAAASESERESNKAAGAGEF-----------SGLKKHLEDLWKES 297
           L K P+LA+ KI IE  A  E +R++    G G               +K+ LE +  E+
Sbjct: 241 LRKFPFLAMKKISIEHVA--EDDRKNATKWGPGSLFQANADVTESCFTIKRQLEVMQAEN 300

[Close]

BLAST of Cucsa.177630 vs. NCBI nr
Match: gi|731415588|ref|XP_002268287.2| (PREDICTED: uncharacterized protein LOC100240833 [Vitis vinifera])

HSP 1 Score: 184.5 bits (467), Expect = 2.7e-43
Identity = 118/312 (37.82%), Postives = 162/312 (51.92%), Query Frame = 1


Query: 1   MKASLIFREDQNLS-FRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYR 60
           MKAS+ FRED+    FRAK+ LN  G PFR  V   D+ +L F  +TFF SGP    SYR
Sbjct: 2   MKASVKFREDEKKPLFRAKVALNILGFPFRYGVEAGDATDLRFNLSTFFESGPLIKFSYR 61

Query: 61  PNQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSV 120
            N +L PF++A+K GIG FGSPI +P+  AAEFNL     P FF+HFRPQ+GDF+++RS+
Sbjct: 62  HNDSLTPFAVAVKTGIGRFGSPIGAPIAMAAEFNLLGTGSPSFFIHFRPQIGDFSIKRSM 121

Query: 121 QSNIT----------NFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQR 180
           QS I            FK P      +VD  V                     P  + +R
Sbjct: 122 QSQIALPPQSSIFTPKFKAPADGADLEVDGSVD----------------DAEPPGATGKR 181

Query: 181 IDFSEALNRVDDVLSTMEINARSTFKVGDSTAVKFRWSMTF-----PTCMKKDEFTAKAP 240
           I F      +D V S +E++A +  ++ +   +K RW++ F     PTC   +     A 
Sbjct: 182 ISFPVG-KVIDSVFSGVELSAGTAVRLMNRAVLKLRWNLKFPAEFKPTCAGDNITNQTAG 241

Query: 241 LS--KMPYLALGKIKIERAAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQ 295
           +S  K P+L L KI IE  AA  S   S   AG      +K+ L+ L  ++  L+K I +
Sbjct: 242 ISGDKAPFLVLSKIGIEHVAADNSPHSSTGVAGT--CLSMKRELDALRAQNESLRKGIAE 294

[Close]

BLAST of Cucsa.177630 vs. NCBI nr
Match: gi|674242259|gb|KFK35024.1| (hypothetical protein AALP_AA5G224200 [Arabis alpina])

HSP 1 Score: 184.1 bits (466), Expect = 3.5e-43
Identity = 114/291 (39.18%), Postives = 167/291 (57.39%), Query Frame = 1


Query: 1   MKASLIFREDQNLSFRAKIPLNFFGLPFRSSVHLPDSDNLSFTFATFFRSGPSFNLSYRP 60
           MKAS+ FRE+Q   FRAK+PL+  GLPF+S +   +S  LS   +TFF SGPS  ++YRP
Sbjct: 1   MKASMKFREEQKPLFRAKVPLSILGLPFQSGIVAGESKELSLNLSTFFESGPSLKVAYRP 60

Query: 61  NQALNPFSLAIKAGIGLFGSPIDSPMTFAAEFNLPANQPPRFFLHFRPQLGDFTLRRSVQ 120
           N + NPFSL +K G G FGSPI S M  +AEFNL     P F LHF+PQ GDF++++S  
Sbjct: 61  NDSYNPFSLIVKTGTGSFGSPISSSMLMSAEFNLLGQGNPSFMLHFKPQFGDFSIKKSHS 120

Query: 121 SNITNFKLPYRNLISQVDDDVSAFTRGKSVVGPETPDLGLGNPVLSSQRIDFSEALNRVD 180
           S+  N      NLI+ V+  VS       VV  ++P +G G        I  S +   + 
Sbjct: 121 SSGIN-----TNLINSVNGSVSEDDASVEVV--DSP-IGGG---FRKVTILPSTSAGDIA 180

Query: 181 DVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKD-EFTAKAPLSKMPYLALGKIKIE 240
            +LS +E+ AR++  V     V FRW +  PT +++D + TA   L + P+L + KI IE
Sbjct: 181 GLLSGVEVAARTSLPVRGKAVVNFRWGVRVPTEIRRDFDPTAAISLRRFPFLVMNKIGIE 240

Query: 241 RAAASESERESNKAA--GAGEFSGL-KKHLEDLWKESRWLKKNIEQLQSEI 288
              A E   +  + +  G G+ + +  K +E+L  E+R LK++++ L+  I
Sbjct: 241 HVDAKEIRSDPGQVSDPGRGDVAEVCLKQMEELRLENRQLKRSVDDLREVI 280

The following BLAST results are available for this feature:

BLAST of Cucsa.177630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD41_CUCSA	2.7e-167	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G702600 PE=4 SV=1	[more]
A5AP97_VITVI	1.9e-43	37.82	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024455 PE=4 SV=1	[more]
F6HPT9_VITVI	1.9e-43	37.82	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00330 PE=4 SV=...	[more]
U5GE46_POPTR	2.5e-43	39.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s20610g PE=4 SV=1	[more]
A0A087GYS2_ARAAL	2.5e-43	39.18	Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G224200 PE=4 SV=1	[more]

BLAST of Cucsa.177630 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57990.1	1.1e-45	36.93	unknown protein	[more]

BLAST of Cucsa.177630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778688767\|ref\|XP_011652835.1\|	3.9e-167	100.00	PREDICTED: uncharacterized protein LOC105435123 [Cucumis sativus]	[more]
gi\|659123890\|ref\|XP_008461888.1\|	2.4e-148	88.26	PREDICTED: uncharacterized protein LOC103500380 [Cucumis melo]	[more]
gi\|720005867\|ref\|XP_010257793.1\|	3.1e-47	37.77	PREDICTED: uncharacterized protein LOC104597767 [Nelumbo nucifera]	[more]
gi\|731415588\|ref\|XP_002268287.2\|	2.7e-43	37.82	PREDICTED: uncharacterized protein LOC100240833 [Vitis vinifera]	[more]
gi\|674242259\|gb\|KFK35024.1\|	3.5e-43	39.18	hypothetical protein AALP_AA5G224200 [Arabis alpina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.177630.1	Cucsa.177630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34285	FAMILY NOT NAMED	coord: 2..291 score: 9.6
None	No IPR available	PANTHER	PTHR34285:SF3	SUBFAMILY NOT NAMED	coord: 2..291 score: 9.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.177630	Cla017240	Watermelon (97103) v1	cgywmB334
Cucsa.177630	Csa3G702600	Cucumber (Chinese Long) v2	cgycuB268
Cucsa.177630	MELO3C023944	Melon (DHL92) v3.5.1	cgymeB317
Cucsa.177630	ClCG10G012630	Watermelon (Charleston Gray)	cgywcgB312
Cucsa.177630	CSPI03G29970	Wild cucumber (PI 183967)	cgycpiB278
Cucsa.177630	CmaCh14G010280	Cucurbita maxima (Rimu)	cgycmaB0497
Cucsa.177630	CmoCh14G010460	Cucurbita moschata (Rifu)	cgycmoB0499
Cucsa.177630	Lsi03G012320	Bottle gourd (USVL1VR-Ls)	cgylsiB297
Cucsa.177630	Cp4.1LG03g09040	Cucurbita pepo (Zucchini)	cgycpeB0489
Cucsa.177630	MELO3C023944.2	Melon (DHL92) v3.6.1	cgymedB312
Cucsa.177630	CsaV3_3G032440	Cucumber (Chinese Long) v3	cgycucB281
Cucsa.177630	Cla97C10G195500	Watermelon (97103) v2	cgywmbB317
Cucsa.177630	Bhi11G001214	Wax gourd	cgywgoB360
Cucsa.177630	Carg11243	Silver-seed gourd	carcgyB0928

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.177630	Silver-seed gourd	carcgyB0858
Cucsa.177630	Cucurbita maxima (Rimu)	cgycmaB0499
Cucsa.177630	Cucurbita moschata (Rifu)	cgycmoB0501
Cucsa.177630	Cucurbita pepo (Zucchini)	cgycpeB0487