Bhi11G001214 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G001214
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	CCAAT/enhancer-binding protein delta
Location	chr11 : 41348951 .. 41349423 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGAAACTAGTGACCTACGGCTAGGGCTTGGAAATGCGGTTCTCTCCAGCCAGAGAATCGATTGCTCCGAGGTATGGAATCGTGTCGATGATGTGCTCTCCACCGTGGAGATTAATGCGAGATCGACGTTTAAGTTAAGAGACTCGGCGGCGGTGAAGTTCCGATGGAGCATGAGGTTTCCGACGAGCATGAAGAAGGAAGACTTCTTGGCCAAGATTCCGCCCTCCAAAATGCCATATCTAGCATTAGGAAAGATCAAAATCGAACGCGCGATGGCAAGCGACAGCGAACGAGAAAGCAATGAGGCTGGCGGAGCCGGAGAGTTTTTAGCTTTGAAGAAGCATTTGGACGATTTATGGACAGAAAGCCGGTGGTTGAAGAAGAACATAGAGGAACTTCAGTCGGAGATCGGTGACCAGAAGGCTGCACCGGCGACTCCGCCGGTTGAAACAAGGAAGAAAAAGTGA

mRNA sequence

ATGGCGGCGAAACTAAGAATCGATTGCTCCGAGGTATGGAATCGTGTCGATGATGTGCTCTCCACCGTGGAGATTAATGCGAGATCGACGTTTAAGTTAAGAGACTCGGCGGCGGTGAAGTTCCGATGGAGCATGAGGTTTCCGACGAGCATGAAGAAGGAAGACTTCTTGGCCAAGATTCCGCCCTCCAAAATGCCATATCTAGCATTAGGAAAGATCAAAATCGAACGCGCGATGGCAAGCGACAGCGAACGAGAAAGCAATGAGGCTGGCGGAGCCGGAGAGTTTTTAGCTTTGAAGAAGCATTTGGACGATTTATGGACAGAAAGCCGGTGGTTGAAGAAGAACATAGAGGAACTTCAGTCGGAGATCGGTGACCAGAAGGCTGCACCGGCGACTCCGCCGGTTGAAACAAGGAAGAAAAAGTGA

Coding sequence (CDS)

ATGGCGGCGAAACTAAGAATCGATTGCTCCGAGGTATGGAATCGTGTCGATGATGTGCTCTCCACCGTGGAGATTAATGCGAGATCGACGTTTAAGTTAAGAGACTCGGCGGCGGTGAAGTTCCGATGGAGCATGAGGTTTCCGACGAGCATGAAGAAGGAAGACTTCTTGGCCAAGATTCCGCCCTCCAAAATGCCATATCTAGCATTAGGAAAGATCAAAATCGAACGCGCGATGGCAAGCGACAGCGAACGAGAAAGCAATGAGGCTGGCGGAGCCGGAGAGTTTTTAGCTTTGAAGAAGCATTTGGACGATTTATGGACAGAAAGCCGGTGGTTGAAGAAGAACATAGAGGAACTTCAGTCGGAGATCGGTGACCAGAAGGCTGCACCGGCGACTCCGCCGGTTGAAACAAGGAAGAAAAAGTGA

Protein sequence

MAAKLRIDCSEVWNRVDDVLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKKEDFLAKIPPSKMPYLALGKIKIERAMASDSERESNEAGGAGEFLALKKHLDDLWTESRWLKKNIEELQSEIGDQKAAPATPPVETRKKK

Homology

[Close]

BLAST of Bhi11G001214 vs. TAIR10
Match: AT3G57990.1 (unknown protein)

HSP 1 Score: 57.8 bits (138), Expect = 6.4e-09
Identity = 38/125 (30.40%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 19  VLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKKE-DFLAKIPPSKMPYLALGKIKIER 78
           +LS VE+ AR++  +R  A + FRW +R PT ++++ D  A I   + P+L + KI IE 
Sbjct: 175 LLSGVEVAARTSLPVRGRAVLNFRWGVRVPTEIRRDFDPTAAISLRRFPFLVMNKIGIEH 234

Query: 79  AMASD-----SERESNEAGGAGEFLA---LKKHLDDLWTESRWLKKNIEELQSEIGDQKA 134
              +D     S  +  +  G  +F     + + +++L TE++ LK+ +E+L+  I + + 
Sbjct: 235 VDGADAKVTKSTGDPGKVSGPAQFTTSGDVAEVIEELRTENKQLKRAVEDLREVISNVRP 294

[Close]

BLAST of Bhi11G001214 vs. TrEMBL
Match: tr|A0A1S3CFN0|A0A1S3CFN0_CUCME (uncharacterized protein LOC103500380 OS=Cucumis melo OX=3656 GN=LOC103500380 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.2e-56
Identity = 112/137 (81.75%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 6   RIDCSEVWNRVDDVLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKKEDFLAKIPPSKM 65
           RIDCSEV+NRVDDV ST+EINARSTFK+ DS AVKFRWSMRFPTSM K+ F AK P SKM
Sbjct: 169 RIDCSEVFNRVDDVFSTMEINARSTFKVGDSTAVKFRWSMRFPTSMNKDGFTAKAPLSKM 228

Query: 66  PYLALGKIKIERAMASDSERESNEAGGAGEFLALKKHLDDLWTESRWLKKNIEELQSEIG 125
           PYLALGKIKIERA AS+ ERESNEAGGAGEF  +KKHL+DLW ESRWLKKN+E+LQSEIG
Sbjct: 229 PYLALGKIKIERAAASEGERESNEAGGAGEFSGMKKHLEDLWKESRWLKKNVEQLQSEIG 288

Query: 126 DQKAAPATPPVETRKKK 143
           +QKA P TPPVETRKKK
Sbjct: 289 EQKAGPTTPPVETRKKK 305

[Close]

BLAST of Bhi11G001214 vs. TrEMBL
Match: tr|A0A0A0LD41|A0A0A0LD41_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G702600 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-54
Identity = 112/137 (81.75%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 6   RIDCSEVWNRVDDVLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKKEDFLAKIPPSKM 65
           RID SE  NRVDDVLST+EINARSTFK+ DS AVKFRWSM FPT MKK++F AK P SKM
Sbjct: 169 RIDFSEALNRVDDVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKDEFTAKAPLSKM 228

Query: 66  PYLALGKIKIERAMASDSERESNEAGGAGEFLALKKHLDDLWTESRWLKKNIEELQSEIG 125
           PYLALGKIKIERA AS+SERESN+A GAGEF  LKKHL+DLW ESRWLKKNIE+LQSEIG
Sbjct: 229 PYLALGKIKIERAAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQLQSEIG 288

Query: 126 DQKAAPATPPVETRKKK 143
           +QKAAP+TPPVETRKKK
Sbjct: 289 EQKAAPSTPPVETRKKK 305

[Close]

BLAST of Bhi11G001214 vs. TrEMBL
Match: tr|A0A200RBD6|A0A200RBD6_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1667g11 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-10
Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 0


Query: 14  NRVDDVLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKKEDFLAKIPPSKMPYLALGKI 73
           N +D + + +E+NA +   +R+ A VKFRW +RFPT +K    +      K+P+L + KI
Sbjct: 197 NAIDRLFNGIEMNATTVLPVRNRALVKFRWGVRFPTELKNPPMVLSSSLRKIPFLVMSKI 256

Query: 74  KIERAMASDSERE---------SNEAGGAGEFLALKKHLDDLWTESRWLKKNIEELQSEI 126
            +E    S S            +  A  A  +LA+K+ L+ L  E+  L+K  EEL+SEI
Sbjct: 257 SLEHVAESKSAESTKRDPSAILAGNADVAATWLAVKRDLEVLQVENGLLRKATEELRSEI 316

[Close]

BLAST of Bhi11G001214 vs. TrEMBL
Match: tr|A0A1D1ZAI0|A0A1D1ZAI0_9ARAE (CCAAT/enhancer-binding protein delta OS=Anthurium amnicola OX=1678845 GN=CEBPD PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 49/131 (37.40%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 19  VLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKK---EDFLAKIP-----PSKMPYLAL 78
           +LS VE+ ARS   LR   AVKFRW +R P  ++     DF AK P     P K+P L +
Sbjct: 180 LLSGVELTARSVLPLRHRTAVKFRWGVRIPPELRPGFVGDFGAKDPITAISPRKLPLLVM 239

Query: 79  GKIKIERAMASDSERESNEAGG-AGEFLALKKHLDDLWTESRWLKKNIEELQSEIGDQKA 138
            KI IE A      +  +E  G A    +L++ L  L  E+  L+K +EEL++++G +K 
Sbjct: 240 SKISIEHAAGEPEPKRHDEVDGVAVACSSLQQQLAALQAENGMLRKAVEELRADLGGRKP 299

Query: 139 APATPPVETRK 141
            P T    T K
Sbjct: 300 EPVTAGGVTAK 310

[Close]

BLAST of Bhi11G001214 vs. TrEMBL
Match: tr|A0A2H3YI67|A0A2H3YI67_PHODC (uncharacterized protein LOC103713901 OS=Phoenix dactylifera OX=42345 GN=LOC103713901 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09
Identity = 43/129 (33.33%), Postives = 71/129 (55.04%), Query Frame = 0


Query: 16  VDDVLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMK----KEDFLAKIPP-----SKMP 75
           +  +LS+ EI+ARS   LR  AAV+FRW +R P  ++    ++    ++P      SK+P
Sbjct: 180 IQGLLSSAEISARSVLPLRSRAAVRFRWGLRMPPELRAAYAEDAGWGRVPAGGISLSKLP 239

Query: 76  YLALGKIKIERAMASDSERESNEAGGAGEF----LALKKHLDDLWTESRWLKKNIEELQS 132
            L + KI IE       + +  +A   G+     L++++ L+ L  E+  L+K +EEL++
Sbjct: 240 LLVMNKISIEHVALDVGKSKEKDAVAGGDVAEACLSVRRQLETLQAENGLLRKAVEELRA 299

[Close]

BLAST of Bhi11G001214 vs. NCBI nr
Match: XP_008461888.1 (PREDICTED: uncharacterized protein LOC103500380 [Cucumis melo])

HSP 1 Score: 227.3 bits (578), Expect = 3.4e-56
Identity = 112/137 (81.75%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 6   RIDCSEVWNRVDDVLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKKEDFLAKIPPSKM 65
           RIDCSEV+NRVDDV ST+EINARSTFK+ DS AVKFRWSMRFPTSM K+ F AK P SKM
Sbjct: 169 RIDCSEVFNRVDDVFSTMEINARSTFKVGDSTAVKFRWSMRFPTSMNKDGFTAKAPLSKM 228

Query: 66  PYLALGKIKIERAMASDSERESNEAGGAGEFLALKKHLDDLWTESRWLKKNIEELQSEIG 125
           PYLALGKIKIERA AS+ ERESNEAGGAGEF  +KKHL+DLW ESRWLKKN+E+LQSEIG
Sbjct: 229 PYLALGKIKIERAAASEGERESNEAGGAGEFSGMKKHLEDLWKESRWLKKNVEQLQSEIG 288

Query: 126 DQKAAPATPPVETRKKK 143
           +QKA P TPPVETRKKK
Sbjct: 289 EQKAGPTTPPVETRKKK 305

[Close]

BLAST of Bhi11G001214 vs. NCBI nr
Match: XP_011652835.1 (PREDICTED: uncharacterized protein LOC105435123 [Cucumis sativus] >KGN58622.1 hypothetical protein Csa_3G702600 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54
Identity = 112/137 (81.75%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 6   RIDCSEVWNRVDDVLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKKEDFLAKIPPSKM 65
           RID SE  NRVDDVLST+EINARSTFK+ DS AVKFRWSM FPT MKK++F AK P SKM
Sbjct: 169 RIDFSEALNRVDDVLSTMEINARSTFKVGDSTAVKFRWSMTFPTCMKKDEFTAKAPLSKM 228

Query: 66  PYLALGKIKIERAMASDSERESNEAGGAGEFLALKKHLDDLWTESRWLKKNIEELQSEIG 125
           PYLALGKIKIERA AS+SERESN+A GAGEF  LKKHL+DLW ESRWLKKNIE+LQSEIG
Sbjct: 229 PYLALGKIKIERAAASESERESNKAAGAGEFSGLKKHLEDLWKESRWLKKNIEQLQSEIG 288

Query: 126 DQKAAPATPPVETRKKK 143
           +QKAAP+TPPVETRKKK
Sbjct: 289 EQKAAPSTPPVETRKKK 305

[Close]

BLAST of Bhi11G001214 vs. NCBI nr
Match: XP_023526002.1 (uncharacterized protein LOC111789609 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.3 bits (495), Expect = 1.4e-46
Identity = 100/137 (72.99%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 6   RIDCSEVWNRVDDVLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKKEDFLAKIPPSKM 65
           RI CS ++NR  D+LST EINARSTFK+++SA+VKF+W MRFP SMKKE+F AK+  SK+
Sbjct: 168 RIHCSGIFNRFHDLLSTGEINARSTFKVKNSASVKFQWCMRFPMSMKKEEFTAKVMLSKL 227

Query: 66  PYLALGKIKIERAMASDSERESNEAGGAGEFLALKKHLDDLWTESRWLKKNIEELQSEIG 125
           PYLAL KIKIE A ASDSERESNEA  AGE   LKKHLDDL TESRW+KKNIE+L+SEIG
Sbjct: 228 PYLALRKIKIELAKASDSERESNEAVSAGEISVLKKHLDDLRTESRWMKKNIEQLRSEIG 287

Query: 126 DQKAAPATPPVETRKKK 143
           DQ AAPA PPVE+RKK+
Sbjct: 288 DQMAAPANPPVESRKKR 304

[Close]

BLAST of Bhi11G001214 vs. NCBI nr
Match: XP_022934548.1 (uncharacterized protein LOC111441692 [Cucurbita moschata])

HSP 1 Score: 193.4 bits (490), Expect = 5.4e-46
Identity = 103/143 (72.03%), Postives = 118/143 (82.52%), Query Frame = 0


Query: 1   MAAKLRIDCSEVWNRVDDVLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKKEDFLAKI 60
           M +  RI CS ++NR  D+LST EINARSTFK+++SAAVKF+W MRFP SMKKE+F AK+
Sbjct: 163 MLSGQRIHCSGIFNRFHDLLSTGEINARSTFKVKNSAAVKFQWCMRFPMSMKKEEFTAKV 222

Query: 61  P-PSKMPYLALGKIKIERAMASDSERESNEAGGAGEFLALKKHLDDLWTESRWLKKNIEE 120
              SK+PYLAL KIKIE A ASDSERESNEA  AGE   LKKHLDDL TESRW+KKNIE+
Sbjct: 223 MLLSKLPYLALRKIKIELAAASDSERESNEAVSAGEISVLKKHLDDLRTESRWMKKNIEQ 282

Query: 121 LQSEIGDQKAAPATPPVETRKKK 143
           L+SEIGDQ AAPA PPVE+RKKK
Sbjct: 283 LRSEIGDQVAAPANPPVESRKKK 305

[Close]

BLAST of Bhi11G001214 vs. NCBI nr
Match: XP_022983406.1 (uncharacterized protein LOC111482016 [Cucurbita maxima])

HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45
Identity = 99/137 (72.26%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 6   RIDCSEVWNRVDDVLSTVEINARSTFKLRDSAAVKFRWSMRFPTSMKKEDFLAKIPPSKM 65
           RI CS ++NRV D+LST EINARSTFK+++SAAVKF+W MRFP SMKKE+F AK+  SK+
Sbjct: 168 RIHCSGIYNRVHDLLSTGEINARSTFKVKNSAAVKFQWCMRFPMSMKKEEFTAKVMLSKI 227

Query: 66  PYLALGKIKIERAMASDSERESNEAGGAGEFLALKKHLDDLWTESRWLKKNIEELQSEIG 125
           PYLAL KIKIE A ASDSERESNEA G GE   LKKHL+DL TES W+KK IE+L+SEIG
Sbjct: 228 PYLALRKIKIELAAASDSERESNEAVGGGEISVLKKHLEDLRTESLWMKKYIEQLRSEIG 287

Query: 126 DQKAAPATPPVETRKKK 143
           DQ AAPA PPVE+RKK+
Sbjct: 288 DQMAAPANPPVESRKKR 304

The following BLAST results are available for this feature:

BLAST of Bhi11G001214 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi11G001214 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57990.1	6.4e-09	30.40	unknown protein	[more]

BLAST of Bhi11G001214 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CFN0\|A0A1S3CFN0_CUCME	2.2e-56	81.75	uncharacterized protein LOC103500380 OS=Cucumis melo OX=3656 GN=LOC103500380 PE=...	[more]
tr\|A0A0A0LD41\|A0A0A0LD41_CUCSA	1.2e-54	81.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G702600 PE=4 SV=1	[more]
tr\|A0A200RBD6\|A0A200RBD6_9MAGN	4.1e-10	34.71	Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1667g11 PE=4 SV=1	[more]
tr\|A0A1D1ZAI0\|A0A1D1ZAI0_9ARAE	1.6e-09	37.40	CCAAT/enhancer-binding protein delta OS=Anthurium amnicola OX=1678845 GN=CEBPD P...	[more]
tr\|A0A2H3YI67\|A0A2H3YI67_PHODC	2.1e-09	33.33	uncharacterized protein LOC103713901 OS=Phoenix dactylifera OX=42345 GN=LOC10371...	[more]

BLAST of Bhi11G001214 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461888.1	3.4e-56	81.75	PREDICTED: uncharacterized protein LOC103500380 [Cucumis melo]	[more]
XP_011652835.1	1.9e-54	81.75	PREDICTED: uncharacterized protein LOC105435123 [Cucumis sativus] >KGN58622.1 hy...	[more]
XP_023526002.1	1.4e-46	72.99	uncharacterized protein LOC111789609 [Cucurbita pepo subsp. pepo]	[more]
XP_022934548.1	5.4e-46	72.03	uncharacterized protein LOC111441692 [Cucurbita moschata]	[more]
XP_022983406.1	1.6e-45	72.26	uncharacterized protein LOC111482016 [Cucurbita maxima]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:1904659	glucose transmembrane transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0019031	viral envelope
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M001214	Bhi11M001214	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..142
None	No IPR available	PANTHER	PTHR34285	FAMILY NOT NAMED	coord: 15..135

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi11G001214	Csa3G702600	Cucumber (Chinese Long) v2	cuwgoB221
Bhi11G001214	MELO3C023944	Melon (DHL92) v3.5.1	mewgoB374
Bhi11G001214	ClCG10G012630	Watermelon (Charleston Gray)	wcgwgoB078
Bhi11G001214	CSPI03G29970	Wild cucumber (PI 183967)	cpiwgoB221
Bhi11G001214	Cucsa.177630	Cucumber (Gy14) v1	cgywgoB360
Bhi11G001214	CmoCh14G010460	Cucurbita moschata (Rifu)	cmowgoB0279
Bhi11G001214	Lsi03G012320	Bottle gourd (USVL1VR-Ls)	lsiwgoB292
Bhi11G001214	Cp4.1LG03g09040	Cucurbita pepo (Zucchini)	cpewgoB0742
Bhi11G001214	MELO3C023944.2	Melon (DHL92) v3.6.1	medwgoB375
Bhi11G001214	CsaV3_3G032440	Cucumber (Chinese Long) v3	cucwgoB226

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None