Cucsa.169330 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.169330
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	SAUR-like auxin-responsive protein family
Location	scaffold01163 : 243464 .. 244100 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGAAGAAGTAGTTTCTTCATATCTGCTATAAATACACATAAGAATGAAGCCATTCTCATCCAACGAGTACTCTATTTTCTAAATCAAGATCCATATCAAGCAAAACACCGCTCAAACTCACTCACTCTTCTCTTGTTTCAAGTAAATTTTCGATATGGGAATCCGTCTGCCATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATTTGATGTTCCCAAAGGCCATATTGCAGTTTATGTGGGTGAGATTCAAAGGAAGAGATTTGTTGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTACTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAAGGGGTGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCTAGGCTGCACACATCATGAAAATAGAAAGAACAAAAAGAAAATGTTATTAATCACAGTTTTGTCATCTCTAACTTTAGGAAGTAGAGTAGGATAATACTGTACAGTTACTCAGTTGTTTGAGCAATGATAGTTATATTCTTCTCTTACAAAAACGTTTCTCTTCAGCTCATGAATTTCAATTTTTATCAATTACTTTGTTTTTCTT

mRNA sequence

TTTGAAGAAGTAGTTTCTTCATATCTGCTATAAATACACATAAGAATGAAGCCATTCTCATCCAACGAGTACTCTATTTTCTAAATCAAGATCCATATCAAGCAAAACACCGCTCAAACTCACTCACTCTTCTCTTGTTTCAAGTAAATTTTCGATATGGGAATCCGTCTGCCATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATTTGATGTTCCCAAAGGCCATATTGCAGTTTATGTGGGTGAGATTCAAAGGAAGAGATTTGTTGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTACTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAAGGGGTGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCTAGGCTGCACACATCATGAAAATAGAAAGAACAAAAAGAAAATGTTATTAATCACAGTTTTGTCATCTCTAACTTTAGGAAGTAGAGTAGGATAATACTGTACAGTTACTCAGTTGTTTGAGCAATGATAGTTATATTCTTCTCTTACAAAAACGTTTCTCTTCAGCTCATGAATTTCAATTTTTATCAATTACTTTGTTTTTCTT

Coding sequence (CDS)

ATGGGAATCCGTCTGCCATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATTTGATGTTCCCAAAGGCCATATTGCAGTTTATGTGGGTGAGATTCAAAGGAAGAGATTTGTTGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTACTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAAGGGGTGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCTAGGCTGCACACATCATGA

Protein sequence

MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS*

Homology

[Close]

BLAST of Cucsa.169330 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL     SA      PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPRGGLTIPCREDAFINLTARL 95
          FGF HP GGLTIPC ED FIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Cucsa.169330 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL   A +       PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLVAKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPRGGLTIPCREDAFINLTARLH 96
          FGF HP GGLTIPC ED FIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Cucsa.169330 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.3e-22
Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL     +       PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSRSTAAGSA---APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPRGGLTIPCREDAFINLTARL 95
          FGF HP GGLTIPC ED FIN+T+RL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Cucsa.169330 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.6e-22
Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL     +A      PKG +AVYVGE Q+KR++VPISYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSRSTTAASA---APKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPRGGLTIPCREDAFINLTAR 94
          FGF HP GGLTIPC ED FIN+T+R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of Cucsa.169330 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.6e-22
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1


Query: 9  LLNAKQILKMQ--AMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSE 68
          LL AK+IL     A+SA      PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SE
Sbjct: 7  LLGAKKILSRSTAAVSA-----APKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSE 66

Query: 69 EEFGFCHPRGGLTIPCREDAFINLTARL 95
          +EFGF HP GGLTIPC ED FIN+T+RL
Sbjct: 67 DEFGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Cucsa.169330 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-46
Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS 98
          LLNRSEEEFGFCHP GGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Cucsa.169330 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.3e-45
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRL SILLNAKQILKMQAMSARNQ DVPKGHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS 98
          LLNRSEEEFGFCHP GGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Cucsa.169330 vs. TrEMBL
Match: A0A0A0LJ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 6.0e-39
Identity = 81/90 (90.00%), Postives = 84/90 (93.33%), Query Frame = 1


Query: 8   ILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 67
           +L  +  +LKMQAMSARNQ DVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE
Sbjct: 116 VLKGSYLVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 175

Query: 68  EFGFCHPRGGLTIPCREDAFINLTARLHTS 98
           EFGFCHP GGLTIPCREDAFINLTARLHTS
Sbjct: 176 EFGFCHPMGGLTIPCREDAFINLTARLHTS 205

[Close]

BLAST of Cucsa.169330 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.2e-36
Identity = 72/97 (74.23%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIR+PS+LLNAKQI +MQ++S R   ++PKGHIAVYVGEI+RKRFVVP+SYL HP+F+ 
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS 98
          LLNR+EEEFGF HP GGLTIPC+EDAFI+LT++LHTS
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of Cucsa.169330 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.1e-35
Identity = 74/97 (76.29%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPS+LL+AKQILKM+ +S R Q DVPKGHI VYVGE QRKRF+VPISYL HPSFV+
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS 98
          LL+R+EEEFGF HP GGLTIPC+E+AFI++T+RLH S
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Cucsa.169330 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.7 bits (291), Expect = 8.1e-27
Identity = 56/99 (56.57%), Postives = 74/99 (74.75%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILK----MQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHP 60
          M IR+P +L ++KQIL+    + + S+ +  DVPKG++AVYVGE   KRFVVP+SYL  P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVDLLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLH 96
          SF DLL ++EEEFGF HP GGLTIPC E+ FI+L +R +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Cucsa.169330 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 6.8e-26
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEI-QRKRFVVPISYLKHPSFV 60
          M IR+  +L ++KQ+LK  + S+ N   +PKGH+AVYVGE+ Q++RFVVP++YL HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNN-VAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 DLLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS 98
           LL ++EEEFGF HP GGLTIPC E  FI+L +RL TS
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Cucsa.169330 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 9.8e-25
Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 1   MGIRLPSILLNAKQILKMQAMSARNQFD------VPKGHIAVYVGE---IQRKRFVVPIS 60
           MG+   +I    KQILK+ +++ RN+        VPKGH+AVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLKHPSFVDLLNRSEEEFGFCHPRGGLTIPCREDAFINLTA 93
           +L HPSF + L+R+EEEFGF HP GGLTIPCRE+ F++L A
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIA 101

[Close]

BLAST of Cucsa.169330 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.1 bits (266), Expect = 6.4e-24
Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL   A +       PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLVAKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPRGGLTIPCREDAFINLTARLH 96
          FGF HP GGLTIPC ED FIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Cucsa.169330 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.1 bits (266), Expect = 6.4e-24
Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEE 68
          LL AK+IL     SA      PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPRGGLTIPCREDAFINLTARL 95
          FGF HP GGLTIPC ED FIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Cucsa.169330 vs. NCBI nr
Match: gi|778669611|ref|XP_011649277.1| (PREDICTED: auxin-induced protein X15-like [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-46
Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS 98
          LLNRSEEEFGFCHP GGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Cucsa.169330 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 2.5e-46
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILLNAKQ+LKMQAMSARNQ DVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS 98
          LLNRSEEEFGFCHP GGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Cucsa.169330 vs. NCBI nr
Match: gi|659115604|ref|XP_008457639.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 6.2e-45
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRLPSILLNAKQ+LKMQAMSARNQ DVPKG+IAVYVGEIQRKRFVVPISYLKHPSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS 98
          LL RSEEEFGFCHP GGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLKRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Cucsa.169330 vs. NCBI nr
Match: gi|700206767|gb|KGN61886.1| (hypothetical protein Csa_2G258820 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-44
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60
          MGIRL SILLNAKQILKMQAMSARNQ DVPKGHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS 98
          LLNRSEEEFGFCHP GGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Cucsa.169330 vs. NCBI nr
Match: gi|700206766|gb|KGN61885.1| (hypothetical protein Csa_2G258810 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 8.6e-39
Identity = 81/90 (90.00%), Postives = 84/90 (93.33%), Query Frame = 1


Query: 8   ILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 67
           +L  +  +LKMQAMSARNQ DVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE
Sbjct: 116 VLKGSYLVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 175

Query: 68  EFGFCHPRGGLTIPCREDAFINLTARLHTS 98
           EFGFCHP GGLTIPCREDAFINLTARLHTS
Sbjct: 176 EFGFCHPMGGLTIPCREDAFINLTARLHTS 205

The following BLAST results are available for this feature:

BLAST of Cucsa.169330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU21_ARATH	1.1e-22	62.79	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU23_ARATH	1.1e-22	62.07	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU19_ARATH	4.3e-22	60.47	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU20_ARATH	5.6e-22	62.35	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	9.6e-22	61.36	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]

BLAST of Cucsa.169330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM74_CUCSA	1.0e-46	97.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]
A0A0A0LPJ1_CUCSA	7.3e-45	95.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1	[more]
A0A0A0LJ03_CUCSA	6.0e-39	90.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	6.2e-36	74.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LM65_CUCSA	3.1e-35	76.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]

BLAST of Cucsa.169330 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	8.1e-27	56.57	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	6.8e-26	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	9.8e-25	55.45	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	6.4e-24	62.07	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	6.4e-24	62.79	SAUR-like auxin-responsive protein family	[more]

BLAST of Cucsa.169330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669611\|ref\|XP_011649277.1\|	1.5e-46	97.94	PREDICTED: auxin-induced protein X15-like [Cucumis sativus]	[more]
gi\|778669614\|ref\|XP_011649278.1\|	2.5e-46	96.91	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115604\|ref\|XP_008457639.1\|	6.2e-45	94.85	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206767\|gb\|KGN61886.1\|	1.1e-44	95.88	hypothetical protein Csa_2G258820 [Cucumis sativus]	[more]
gi\|700206766\|gb\|KGN61885.1\|	8.6e-39	90.00	hypothetical protein Csa_2G258810 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.169330.1	Cucsa.169330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 1.0
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 3.8
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.169330	Cla015856	Watermelon (97103) v1	cgywmB321
Cucsa.169330	Csa7G009100	Cucumber (Chinese Long) v2	cgycuB258
Cucsa.169330	MELO3C020771	Melon (DHL92) v3.5.1	cgymeB301
Cucsa.169330	MELO3C013384	Melon (DHL92) v3.5.1	cgymeB302
Cucsa.169330	CmaCh20G007770	Cucurbita maxima (Rimu)	cgycmaB0479
Cucsa.169330	CmaCh02G003370	Cucurbita maxima (Rimu)	cgycmaB0480
Cucsa.169330	CmoCh02G003350	Cucurbita moschata (Rifu)	cgycmoB0483
Cucsa.169330	CmoCh20G007760	Cucurbita moschata (Rifu)	cgycmoB0482
Cucsa.169330	Cp4.1LG05g13060	Cucurbita pepo (Zucchini)	cgycpeB0467
Cucsa.169330	MELO3C020771.2	Melon (DHL92) v3.6.1	cgymedB294
Cucsa.169330	CsaV3_2G015590	Cucumber (Chinese Long) v3	cgycucB270
Cucsa.169330	Cla97C11G210250	Watermelon (97103) v2	cgywmbB304
Cucsa.169330	Cla97C11G210440	Watermelon (97103) v2	cgywmbB305
Cucsa.169330	Bhi10G001515	Wax gourd	cgywgoB348

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cucsa.169330	Cucsa.381890	Cucumber (Gy14) v1	cgycgyB107

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.169330	Wild cucumber (PI 183967)	cgycpiB265
Cucsa.169330	Wild cucumber (PI 183967)	cgycpiB266
Cucsa.169330	Cucumber (Chinese Long) v2	cgycuB257
Cucsa.169330	Watermelon (Charleston Gray)	cgywcgB301
Cucsa.169330	Watermelon (97103) v1	cgywmB323
Cucsa.169330	Cucurbita pepo (Zucchini)	cgycpeB0466
Cucsa.169330	Bottle gourd (USVL1VR-Ls)	cgylsiB281