CmoCh02G003350 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G003350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr02 : 1727300 .. 1727593 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCCGTTTGCCATCAGTACTTCTCAATGCCAAGCAGATTCTGAAAGTTCAAGCTATGTCTGCCAAAAATCATTCTGACGTTCCCAAAGGCCACATTGCAGTCTACGTGGGAGAGATCCAGAGAAAGAGATTCGTAGTTCCTATATCATACTTGAAGCATCCTTCTTTCCAAGCTCTGCTAAATAGATCAGAAGAAGAGTTTGGATTTTGCCATCCGATGGGCGGCTTGACGATTCCGTGCAGAGAAGATGCCTTCGTAAATCTCACTTCTAGGCTACACAGATCATGA

mRNA sequence

ATGGGAATCCGTTTGCCATCAGTACTTCTCAATGCCAAGCAGATTCTGAAAGTTCAAGCTATGTCTGCCAAAAATCATTCTGACGTTCCCAAAGGCCACATTGCAGTCTACGTGGGAGAGATCCAGAGAAAGAGATTCGTAGTTCCTATATCATACTTGAAGCATCCTTCTTTCCAAGCTCTGCTAAATAGATCAGAAGAAGAGTTTGGATTTTGCCATCCGATGGGCGGCTTGACGATTCCGTGCAGAGAAGATGCCTTCGTAAATCTCACTTCTAGGCTACACAGATCATGA

Coding sequence (CDS)

ATGGGAATCCGTTTGCCATCAGTACTTCTCAATGCCAAGCAGATTCTGAAAGTTCAAGCTATGTCTGCCAAAAATCATTCTGACGTTCCCAAAGGCCACATTGCAGTCTACGTGGGAGAGATCCAGAGAAAGAGATTCGTAGTTCCTATATCATACTTGAAGCATCCTTCTTTCCAAGCTCTGCTAAATAGATCAGAAGAAGAGTTTGGATTTTGCCATCCGATGGGCGGCTTGACGATTCCGTGCAGAGAAGATGCCTTCGTAAATCTCACTTCTAGGCTACACAGATCATGA

Homology

[Close]

BLAST of CmoCh02G003350 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.9e-26
Identity = 59/87 (67.82%), Postives = 70/87 (80.46%), Query Frame = 1


Query: 9  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEE 68
          LL AK+IL   + SA   S  PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEE
Sbjct: 7  LLVAKKIL---SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFVNLTSRLH 96
          FGF HPMGGLTIPC ED F+N+TSRLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CmoCh02G003350 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-26
Identity = 58/88 (65.91%), Postives = 68/88 (77.27%), Query Frame = 1


Query: 9  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEE 68
          LL AK+IL     +A   S  PKG +AVYVGE Q+KR++VPISYL  PSFQALL++SEEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFVNLTSRLHR 97
          FGF HPMGGLTIPC ED F+N+TSR  R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQR 91

[Close]

BLAST of CmoCh02G003350 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.4e-26
Identity = 57/86 (66.28%), Postives = 68/86 (79.07%), Query Frame = 1


Query: 9  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEE 68
          LL AK+IL   + S    S  PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEE
Sbjct: 7  LLGAKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFVNLTSRL 95
          FGF HPMGGLTIPC ED F+N+TSRL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh02G003350 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-25
Identity = 57/86 (66.28%), Postives = 68/86 (79.07%), Query Frame = 1


Query: 9  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEE 68
          LL AK+IL   + S    S  PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEE
Sbjct: 7  LLGAKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFVNLTSRL 95
          FGF HPMGGLTIPC ED F+N+TSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh02G003350 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-25
Identity = 57/86 (66.28%), Postives = 67/86 (77.91%), Query Frame = 1


Query: 9  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEE 68
          LL AK+IL     SA      PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFVNLTSRL 95
          FGF HPMGGLTIPC ED F+N+TSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of CmoCh02G003350 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 6.8e-43
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQA 60
          MGIRLPS+LLNAKQILK+QAMSA+N  DVPKGHIAVYVGEIQRKRFVVPISYLK+PSF  
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
          LLNRSEEEFGFCHPMGGLTIPCREDAF+NLT+RLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh02G003350 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-42
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQA 60
          MGIRL S+LLNAKQILK+QAMSA+N SDVPKGHIAVYVGEIQRKRFVVPISYLK+PSF  
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
          LLNRSEEEFGFCHPMGGLTIPCREDAF+NLT+RLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh02G003350 vs. TrEMBL
Match: A0A0A0LJ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.3e-37
Identity = 76/90 (84.44%), Postives = 82/90 (91.11%), Query Frame = 1


Query: 8   VLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEE 67
           VL  +  +LK+QAMSA+N SDVPKGHIAVYVGEIQRKRFVVPISYLKHPSF  LLNRSEE
Sbjct: 116 VLKGSYLVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 175

Query: 68  EFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
           EFGFCHPMGGLTIPCREDAF+NLT+RLH S
Sbjct: 176 EFGFCHPMGGLTIPCREDAFINLTARLHTS 205

[Close]

BLAST of CmoCh02G003350 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-36
Identity = 71/97 (73.20%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQA 60
          MGIR+PS+LLNAKQI ++Q++S + HS++PKGHIAVYVGEI+RKRFVVP+SYL HP+F +
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
          LLNR+EEEFGF HP GGLTIPC+EDAF++LTS+LH S
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of CmoCh02G003350 vs. TrEMBL
Match: A0A0A0LPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.2e-36
Identity = 74/97 (76.29%), Postives = 84/97 (86.60%), Query Frame = 1


Query: 1  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQA 60
          MGIRLPS+LL+ KQILK+Q +S K  SD+PKGHIAVYVGEIQ KRFVVPIS+L HPSF  
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
          LL R+EEEFGF HPMGGLTIPCRE+ F++LTSRLH S
Sbjct: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLHTS 97

[Close]

BLAST of CmoCh02G003350 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.9 bits (302), Expect = 4.2e-28
Identity = 58/99 (58.59%), Postives = 75/99 (75.76%), Query Frame = 1


Query: 1  MGIRLPSVLLNAKQILK----VQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHP 60
          M IR+P VL ++KQIL+    + + S+ +  DVPKG++AVYVGE   KRFVVP+SYL  P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLH 96
          SFQ LL ++EEEFGF HPMGGLTIPC E+ F++L SR +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CmoCh02G003350 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.8 bits (299), Expect = 9.4e-28
Identity = 58/98 (59.18%), Postives = 76/98 (77.55%), Query Frame = 1


Query: 1  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEI-QRKRFVVPISYLKHPSFQ 60
          M IR+  VL ++KQ+LK  + S+ N + +PKGH+AVYVGE+ Q++RFVVP++YL HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 ALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
           LL ++EEEFGF HPMGGLTIPC E  F++L SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmoCh02G003350 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.0 bits (297), Expect = 1.6e-27
Identity = 59/87 (67.82%), Postives = 70/87 (80.46%), Query Frame = 1


Query: 9  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEE 68
          LL AK+IL   + SA   S  PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEE
Sbjct: 7  LLVAKKIL---SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFVNLTSRLH 96
          FGF HPMGGLTIPC ED F+N+TSRLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CmoCh02G003350 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.6 bits (296), Expect = 2.1e-27
Identity = 58/88 (65.91%), Postives = 68/88 (77.27%), Query Frame = 1


Query: 9  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEE 68
          LL AK+IL     +A   S  PKG +AVYVGE Q+KR++VPISYL  PSFQALL++SEEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFVNLTSRLHR 97
          FGF HPMGGLTIPC ED F+N+TSR  R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQR 91

[Close]

BLAST of CmoCh02G003350 vs. TAIR10
Match: AT5G18010.1 (AT5G18010.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-27
Identity = 57/86 (66.28%), Postives = 68/86 (79.07%), Query Frame = 1


Query: 9  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEE 68
          LL AK+IL   + S    S  PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEE
Sbjct: 7  LLGAKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFVNLTSRL 95
          FGF HPMGGLTIPC ED F+N+TSRL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh02G003350 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 4.0e-44
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQA 60
          MGIRLPS+LLNAKQ+LK+QAMSA+N SDVPKGHIAVYVGEIQRKRFVVPISYLKHPSF  
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
          LLNRSEEEFGFCHPMGGLTIPCREDAF+NLT+RLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh02G003350 vs. NCBI nr
Match: gi|778669611|ref|XP_011649277.1| (PREDICTED: auxin-induced protein X15-like [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 9.8e-43
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQA 60
          MGIRLPS+LLNAKQILK+QAMSA+N  DVPKGHIAVYVGEIQRKRFVVPISYLK+PSF  
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
          LLNRSEEEFGFCHPMGGLTIPCREDAF+NLT+RLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh02G003350 vs. NCBI nr
Match: gi|659115604|ref|XP_008457639.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 9.8e-43
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQA 60
          MGIRLPS+LLNAKQ+LK+QAMSA+N SDVPKG+IAVYVGEIQRKRFVVPISYLKHPSF  
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
          LL RSEEEFGFCHPMGGLTIPCREDAF+NLT+RLH S
Sbjct: 61 LLKRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh02G003350 vs. NCBI nr
Match: gi|700206767|gb|KGN61886.1| (hypothetical protein Csa_2G258820 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-42
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQA 60
          MGIRL S+LLNAKQILK+QAMSA+N SDVPKGHIAVYVGEIQRKRFVVPISYLK+PSF  
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
          LLNRSEEEFGFCHPMGGLTIPCREDAF+NLT+RLH S
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh02G003350 vs. NCBI nr
Match: gi|700206766|gb|KGN61885.1| (hypothetical protein Csa_2G258810 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-37
Identity = 76/90 (84.44%), Postives = 82/90 (91.11%), Query Frame = 1


Query: 8   VLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEE 67
           VL  +  +LK+QAMSA+N SDVPKGHIAVYVGEIQRKRFVVPISYLKHPSF  LLNRSEE
Sbjct: 116 VLKGSYLVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 175

Query: 68  EFGFCHPMGGLTIPCREDAFVNLTSRLHRS 98
           EFGFCHPMGGLTIPCREDAF+NLT+RLH S
Sbjct: 176 EFGFCHPMGGLTIPCREDAFINLTARLHTS 205

The following BLAST results are available for this feature:

BLAST of CmoCh02G003350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	2.9e-26	67.82	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU20_ARATH	3.7e-26	65.91	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU19_ARATH	6.4e-26	66.28	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU24_ARATH	1.4e-25	66.28	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU21_ARATH	1.4e-25	66.28	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of CmoCh02G003350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM74_CUCSA	6.8e-43	88.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]
A0A0A0LPJ1_CUCSA	1.2e-42	88.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1	[more]
A0A0A0LJ03_CUCSA	4.3e-37	84.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	1.2e-36	73.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LPG7_CUCSA	6.2e-36	76.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1	[more]

BLAST of CmoCh02G003350 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	4.2e-28	58.59	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	9.4e-28	59.18	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.6e-27	67.82	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	2.1e-27	65.91	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	3.6e-27	66.28	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh02G003350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669614\|ref\|XP_011649278.1\|	4.0e-44	89.69	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669611\|ref\|XP_011649277.1\|	9.8e-43	88.66	PREDICTED: auxin-induced protein X15-like [Cucumis sativus]	[more]
gi\|659115604\|ref\|XP_008457639.1\|	9.8e-43	87.63	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206767\|gb\|KGN61886.1\|	1.7e-42	88.66	hypothetical protein Csa_2G258820 [Cucumis sativus]	[more]
gi\|700206766\|gb\|KGN61885.1\|	6.1e-37	84.44	hypothetical protein Csa_2G258810 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G003350.1	CmoCh02G003350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 4.2
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 2.6
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G003350	Cucsa.381960	Cucumber (Gy14) v1	cgycmoB1053
CmoCh02G003350	Cucsa.169330	Cucumber (Gy14) v1	cgycmoB0483
CmoCh02G003350	CmaCh20G007770	Cucurbita maxima (Rimu)	cmacmoB554
CmoCh02G003350	CmaCh02G003370	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G003350	Cla016638	Watermelon (97103) v1	cmowmB603
CmoCh02G003350	Cla015856	Watermelon (97103) v1	cmowmB580
CmoCh02G003350	Csa2G258800	Cucumber (Chinese Long) v2	cmocuB577
CmoCh02G003350	Csa7G009100	Cucumber (Chinese Long) v2	cmocuB633
CmoCh02G003350	MELO3C020771	Melon (DHL92) v3.5.1	cmomeB527
CmoCh02G003350	MELO3C013384	Melon (DHL92) v3.5.1	cmomeB552
CmoCh02G003350	ClCG02G004400	Watermelon (Charleston Gray)	cmowcgB530
CmoCh02G003350	ClCG11G003720	Watermelon (Charleston Gray)	cmowcgB515
CmoCh02G003350	CSPI02G13030	Wild cucumber (PI 183967)	cmocpiB582
CmoCh02G003350	CSPI07G00650	Wild cucumber (PI 183967)	cmocpiB644
CmoCh02G003350	Lsi10G004500	Bottle gourd (USVL1VR-Ls)	cmolsiB533
CmoCh02G003350	MELO3C020771.2	Melon (DHL92) v3.6.1	cmomedB606
CmoCh02G003350	CsaV3_2G015590	Cucumber (Chinese Long) v3	cmocucB0687
CmoCh02G003350	Cla97C11G210250	Watermelon (97103) v2	cmowmbB587
CmoCh02G003350	Bhi10G001515	Wax gourd	cmowgoB0736
CmoCh02G003350	CsGy7G000470	Cucumber (Gy14) v2	cgybcmoB944
CmoCh02G003350	CsGy2G012950	Cucumber (Gy14) v2	cgybcmoB220
CmoCh02G003350	Carg19374	Silver-seed gourd	carcmoB0436

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh02G003350	CmoCh20G007760	Cucurbita moschata (Rifu)	cmocmoB404
CmoCh02G003350	CmoCh20G008050	Cucurbita moschata (Rifu)	cmocmoB416

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G003350	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh02G003350	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G003350	Cucurbita pepo (Zucchini)	cmocpeB595