Cucsa.164900 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.164900
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionThioredoxin H-type
Locationscaffold01153 : 244206 .. 245496 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGCTTCTCATTTCTCCTTAATTCAAATCCCTTTTCTCTAACCCTTATTATTCTTCCCTTTGCTTTTCTTCTATATCTGAAAATAGTTATCAAAATGGCAGAAATGGGAAAAGTTATAAAATGCCACACTCTTGCCTCATGGAACCAACAACTCCTCAAAGCCCAACAATACAACAAGCTGGTATAGTTTATTACTATTGTCATATATATATTATTACTTGTTTCTCTTTTTTGGACAGCTTAATTTTTGTTAAGTTGTTTATCTAAGCAATACCTATATTCTATGGACAGCTTGTCGTGAACTTTACTGCAAAATGGTGTGGTCCATGTCATGCCATGGCTCATGTTCTTGAAGAATTAGCAAAGAAGATGAACAATGTTATTTTTTTGAAAGTAGACATTGATGAACTGAATGTGAGTTTTATTCCATCAAGGCATGTTTGGAATTACTTTCAAACTACTTAAATATATATATATATACATACATATATATTCATTTAAAAGCTTGACAAGTCATTCTAAATAACATATATTCTGTAGGTATTTTTGTTTATGTTTATAATGATCATTAAAATTGAAGGGGGTTTTTGTCACTCAAACTAAAGTATTTTTTTTTTTTCCTCCTTTTTTGGAGACTGTGGCGAATGAGTTTGAAGTGACTGCCCTTCCTTCATATCATTTCTTGAAGAATGGGAGATTGGTTGAAAAATTCGAAGGTGCAAAGAAGGATGTACTGAAAAGCACTGTATCCAAACATGCCACATGAAGTAGCACTCTACCAAATGGTTTACTTTTCTTTAATCGTTTTTGTTTTTTGTTTTGGGACACCTACAAAGGATTGATTTGATCAACCATCAATAACAATGCTACAAATTCAGACATCCATAAATGATAATAAGAATTCAGCCCGATTATGTATTGTTAGTTGATTTGGAATTGGATCTATAGTTTAGGTTTTATTCTTTTTTCCTTTTCTTTAAAAAGATATTTTGTTAAGAAACAAAAAAAAAACAAAACTTACAAGTGAAGTGTTAGAGAAAAGCTATCCAATTCATTTGCAAAAGTACCAAGTGGGCGGCATCAATAAAGGTGGCATCTTCCAAAAGAGAAAAAGGGGAACTTTAGAATGGCCTTTGAAAATTATGTCCAAGAGAAAGGATATTGATCTACTTATCAAAATAGTTTGTAAGAAAAATGTTACAAAAATTGAAAAATATATAATACAAAAACGTATAATACTAGATGATCGATACACAAATTTATTTGTACTACTAACAATGTATTGGCTAC

mRNA sequence

GTTGCTTCTCATTTCTCCTTAATTCAAATCCCTTTTCTCTAACCCTTATTATTCTTCCCTTTGCTTTTCTTCTATATCTGAAAATAGTTATCAAAATGGCAGAAATGGGAAAAGTTATAAAATGCCACACTCTTGCCTCATGGAACCAACAACTCCTCAAAGCCCAACAATACAACAAGCTGCTTGTCGTGAACTTTACTGCAAAATGGTGTGGTCCATGTCATGCCATGGCTCATGTTCTTGAAGAATTAGCAAAGAAGATGAACAATGTTATTTTTTTGAAAGTAGACATTGATGAACTGAATGTGAGTTTTATTCCATCAAGACTGTGGCGAATGAGTTTGAAGTGACTGCCCTTCCTTCATATCATTTCTTGAAGAATGGGAGATTGGTTGAAAAATTCGAAGGTGCAAAGAAGGATGTACTGAAAAGCACTGTATCCAAACATGCCACATGAAGTAGCACTCTACCAAATGGTTTACTTTTCTTTAATCGTTTTTGTTTTTTGTTTTGGGACACCTACAAAGGATTGATTTGATCAACCATCAATAACAATGCTACAAATTCAGACATCCATAAATGATAATAAGAATTCAGCCCGATTATGTATTGTTAGTTGATTTGGAATTGGATCTATAGTTTAGGTTTTATTCTTTTTTCCTTTTCTTTAAAAAGATATTTTGTTAAGAAACAAAAAAAAAACAAAACTTACAAGTGAAGTGTTAGAGAAAAGCTATCCAATTCATTTGCAAAAGTACCAAGTGGGCGGCATCAATAAAGGTGGCATCTTCCAAAAGAGAAAAAGGGGAACTTTAGAATGGCCTTTGAAAATTATGTCCAAGAGAAAGGATATTGATCTACTTATCAAAATAGTTTGTAAGAAAAATgttacaaaaattgaaaaatatataatacaaaaacgtataatactagatgatcgatacacaaatttatttgtactactaacaatgtattggctac

Coding sequence (CDS)

ATGGCAGAAATGGGAAAAGTTATAAAATGCCACACTCTTGCCTCATGGAACCAACAACTCCTCAAAGCCCAACAATACAACAAGCTGCTTGTCGTGAACTTTACTGCAAAATGGTGTGGTCCATGTCATGCCATGGCTCATGTTCTTGAAGAATTAGCAAAGAAGATGAACAATGTTATTTTTTTGAAAGTAGACATTGATGAACTGAATGTGAGTTTTATTCCATCAAGACTGTGGCGAATGAGTTTGAAGTGA

Protein sequence

MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKVDIDELNVSFIPSRLWRMSLK*
Homology
[Close]
BLAST of Cucsa.164900 vs. Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-30
Identity = 61/110 (55.45%), Postives = 83/110 (75.45%), Query Frame = 1 

Query: 2   AEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIF 61
           AE G+VI CHT+ +WN+QL K      L+VV+FTA WCGPC  +A  L ELAKK+ NV F
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTF 62

Query: 62  LKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 112
           LKVD+DEL TVA+E+ V ++P++ FLK G++++K  GAKKD L+ T++KH
Sbjct: 63  LKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKH 112

[Close]
BLAST of Cucsa.164900 vs. Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.0e-30
Identity = 58/110 (52.73%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 2   AEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIF 61
           +E G+VI CHT+ +WN+QL KA +   L+VV+FTA WCGPC  +A    +LAKK+ NV+F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 112
           LKVD DEL +VA+++ + A+P++ FLK G++++K  GAKKD L+ST++KH
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]
BLAST of Cucsa.164900 vs. Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-28
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60
           MAE G+VI  HT+ +WN+ L K     KL+VV+FTA WCGPC  +A    ELAKKM  V 
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVT 60

Query: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 112
           FLKVD+DEL +VA ++ V A+P++ FLK G++V+K  GAKKD L+ T++KH
Sbjct: 61  FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]
BLAST of Cucsa.164900 vs. Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.3e-27
Identity = 55/111 (49.55%), Postives = 81/111 (72.97%), Query Frame = 1 

Query: 2   AEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIF 61
           +E G+V  CH +  WN+   K  +  KL+VV+FTA WCGPC  +A +L ++AKKM +VIF
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIF 68

Query: 62  LKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHA 113
           LKVD+DEL TV+ E+ V A+P++ F+K+G+ V++  GAKK+ L+ T+ KHA
Sbjct: 69  LKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHA 119

[Close]
BLAST of Cucsa.164900 vs. Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H5 OS=Arabidopsis thaliana GN=TRX5 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.8e-27
Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60
           MA  G+VI CHTL  WN+++  A +  KL+V++FTA WC PC  +A V  E+AKK  NV+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 112
           F K+D+DEL  VA EF+V A+P++ F+K G ++++  GA KD +   + KH
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]
BLAST of Cucsa.164900 vs. TrEMBL
Match: A0A0A0KLR8_CUCSA (Thioredoxin H-type OS=Cucumis sativus GN=Csa_5G189900 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-58
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60
           MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI
Sbjct: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60

Query: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 114
           FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT
Sbjct: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 113

[Close]
BLAST of Cucsa.164900 vs. TrEMBL
Match: A0A0A0KLS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190490 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.0e-39
Identity = 80/113 (70.80%), Postives = 98/113 (86.73%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKM-NNV 60
           MAEMGKVI CHT++SW Q LLKA+Q NKL+VVNFTA WCGPC  MA +LEELAKKM NNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  IFLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHA 113
           IFLKVDIDEL ++A EF V+++PS+ FLKNG+LV+KF GAKK +L++T+SKH+
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 113

[Close]
BLAST of Cucsa.164900 vs. TrEMBL
Match: A0A0A0KSB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190500 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.2e-36
Identity = 77/112 (68.75%), Postives = 91/112 (81.25%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKM-NNV 60
           M +MGKV+ CHT+ SW QQLLKA+Q NKL+VVNFTA WC PC  MA VLE+LA KM NNV
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60

Query: 61  IFLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 112
            FLKVD+DEL +VA+E+ V ALPS+ F KNG+LV+KF GA+KDVL  TVSKH
Sbjct: 61  TFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 112

[Close]
BLAST of Cucsa.164900 vs. TrEMBL
Match: A0A0A0LGF7_CUCSA (Thioredoxin OS=Cucumis sativus GN=Csa_3G865340 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-33
Identity = 70/112 (62.50%), Postives = 91/112 (81.25%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60
           MAE  +VI CHT+ SW QQLLK +Q++KL+VV+FTA WCGPC A+A V  ELA+KM+NVI
Sbjct: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHA 113
           FLKVD+D+L TVA E+ V+ALP + FLKNG++V++F GA+KD L+  VS HA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHHA 112

[Close]
BLAST of Cucsa.164900 vs. TrEMBL
Match: I1SSJ4_HEVBR (Thioredoxin H-type 8 OS=Hevea brasiliensis GN=TrxH8 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.5e-30
Identity = 62/113 (54.87%), Postives = 87/113 (76.99%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60
           MAE G+VI CHT+ +W +QL K Q+  KL+VV+FTA WCGPC  ++ +L E AKKM +V 
Sbjct: 1   MAEEGQVIACHTVQAWTEQLEKGQESKKLIVVDFTASWCGPCRFISPILAEFAKKMPHVT 60

Query: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 114
           FLKVD+DEL TVA ++ V A+P++ FLK G++++K  GAKK+ L+ T++KHAT
Sbjct: 61  FLKVDVDELKTVAEDWAVKAMPTFMFLKEGKIIDKVVGAKKEELQQTIAKHAT 113

[Close]
BLAST of Cucsa.164900 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1)

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-31
Identity = 58/110 (52.73%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 2   AEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIF 61
           +E G+VI CHT+ +WN+QL KA +   L+VV+FTA WCGPC  +A    +LAKK+ NV+F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 112
           LKVD DEL +VA+++ + A+P++ FLK G++++K  GAKKD L+ST++KH
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]
BLAST of Cucsa.164900 vs. TAIR10
Match: AT1G45145.1 (AT1G45145.1 thioredoxin H-type 5)

HSP 1 Score: 120.9 bits (302), Expect = 5.0e-28
Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60
           MA  G+VI CHTL  WN+++  A +  KL+V++FTA WC PC  +A V  E+AKK  NV+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 112
           F K+D+DEL  VA EF+V A+P++ F+K G ++++  GA KD +   + KH
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]
BLAST of Cucsa.164900 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3)

HSP 1 Score: 117.9 bits (294), Expect = 4.2e-27
Identity = 54/113 (47.79%), Postives = 77/113 (68.14%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60
           MA  G+VI CHT+  W ++L  A +  KL+V++FTA WC PC  +A V  +LAKK  +V+
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 114
           F KVD+DELNTVA EF+V A+P++ F+K G + E   GA K+ + + + KH T
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKT 113

[Close]
BLAST of Cucsa.164900 vs. TAIR10
Match: AT1G19730.1 (AT1G19730.1 Thioredoxin superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 9.4e-27
Identity = 56/111 (50.45%), Postives = 79/111 (71.17%), Query Frame = 1 

Query: 2   AEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKK-MNNVI 61
           AE G+VI CHT   W  QL KA++ NKL+V++FTA WC PC  +A +  +LAKK M++ I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 112
           F KVD+DEL +VA EF V A+P++ F+K G +V+K  GA K+ L++ + KH
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]
BLAST of Cucsa.164900 vs. TAIR10
Match: AT5G39950.1 (AT5G39950.1 thioredoxin 2)

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-22
Identity = 48/109 (44.04%), Postives = 72/109 (66.06%), Query Frame = 1 

Query: 2   AEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIF 61
           +E  +V+K  + A W     + ++ NKLLVV+F+A WCGPC  +   +  +A K N+V F
Sbjct: 22  SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDF 81

Query: 62  LKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSK 111
           +K+D+DEL  VA EF VTA+P++  +K G+ +E+  GAKKD L+  VSK
Sbjct: 82  VKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

[Close]
BLAST of Cucsa.164900 vs. NCBI nr
Match: gi|449464458|ref|XP_004149946.1| (PREDICTED: thioredoxin H-type [Cucumis sativus])

HSP 1 Score: 231.9 bits (590), Expect = 5.7e-58
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60
           MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI
Sbjct: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60

Query: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 114
           FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT
Sbjct: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 113

[Close]
BLAST of Cucsa.164900 vs. NCBI nr
Match: gi|659129892|ref|XP_008464898.1| (PREDICTED: thioredoxin H1-like [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-53
Identity = 105/113 (92.92%), Postives = 109/113 (96.46%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVI 60
           MA++GKVI CHTLASWNQQLLKAQQYNKLLVVNFTA+WCGPCHAMA VLEELAKKMNNVI
Sbjct: 1   MADVGKVITCHTLASWNQQLLKAQQYNKLLVVNFTARWCGPCHAMASVLEELAKKMNNVI 60

Query: 61  FLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 114
           FLKVDIDELN+VA EFEV ALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT
Sbjct: 61  FLKVDIDELNSVAKEFEVAALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 113

[Close]
BLAST of Cucsa.164900 vs. NCBI nr
Match: gi|659129894|ref|XP_008464899.1| (PREDICTED: thioredoxin H-type-like [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-40
Identity = 82/113 (72.57%), Postives = 100/113 (88.50%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKM-NNV 60
           MAEMGKVI CHT++SW Q LLKA+QYNKL+VVNFTA WCGPC  MA +LEELAKKM NNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  IFLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHA 113
           IFLKVDIDEL ++A EF V+++PS+ FLKNG+LV+KF GAKK++L+ST+SKH+
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHS 113

[Close]
BLAST of Cucsa.164900 vs. NCBI nr
Match: gi|449464454|ref|XP_004149944.1| (PREDICTED: thioredoxin H-type-like [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-38
Identity = 80/113 (70.80%), Postives = 98/113 (86.73%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKM-NNV 60
           MAEMGKVI CHT++SW Q LLKA+Q NKL+VVNFTA WCGPC  MA +LEELAKKM NNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  IFLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHA 113
           IFLKVDIDEL ++A EF V+++PS+ FLKNG+LV+KF GAKK +L++T+SKH+
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 113

[Close]
BLAST of Cucsa.164900 vs. NCBI nr
Match: gi|659129896|ref|XP_008464900.1| (PREDICTED: thioredoxin H1-like [Cucumis melo])

HSP 1 Score: 162.2 bits (409), Expect = 5.5e-37
Identity = 78/112 (69.64%), Postives = 92/112 (82.14%), Query Frame = 1 

Query: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKM-NNV 60
           M +MGKV+ CHT+ SW QQLLKA+QYNKL+VVNFTA WC PC  MA VL++LA KM NNV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 112
           I LKVD+DEL +VANE+ V ALPS+ F KNG+LV+KF GA+KDVL  TVSKH
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 112

The following BLAST results are available for this feature:
BLAST of Cucsa.164900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRXH_RICCO1.3e-3055.45Thioredoxin H-type OS=Ricinus communis PE=3 SV=1[more]
TRXH1_ARATH5.0e-3052.73Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1[more]
TRXH2_TOBAC1.6e-2854.05Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1[more]
TRXH1_TOBAC2.3e-2749.55Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1[more]
TRXH5_ARATH8.8e-2746.85Thioredoxin H5 OS=Arabidopsis thaliana GN=TRX5 PE=1 SV=1[more]
BLAST of Cucsa.164900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLR8_CUCSA3.9e-58100.00Thioredoxin H-type OS=Cucumis sativus GN=Csa_5G189900 PE=4 SV=1[more]
A0A0A0KLS7_CUCSA7.0e-3970.80Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190490 PE=4 SV=1[more]
A0A0A0KSB1_CUCSA4.2e-3668.75Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190500 PE=4 SV=1[more]
A0A0A0LGF7_CUCSA1.2e-3362.50Thioredoxin OS=Cucumis sativus GN=Csa_3G865340 PE=3 SV=1[more]
I1SSJ4_HEVBR3.5e-3054.87Thioredoxin H-type 8 OS=Hevea brasiliensis GN=TrxH8 PE=2 SV=1[more]
BLAST of Cucsa.164900 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51030.12.8e-3152.73 thioredoxin H-type 1[more]
AT1G45145.15.0e-2846.85 thioredoxin H-type 5[more]
AT5G42980.14.2e-2747.79 thioredoxin 3[more]
AT1G19730.19.4e-2750.45 Thioredoxin superfamily protein[more]
AT5G39950.11.4e-2244.04 thioredoxin 2[more]
BLAST of Cucsa.164900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464458|ref|XP_004149946.1|5.7e-58100.00PREDICTED: thioredoxin H-type [Cucumis sativus][more]
gi|659129892|ref|XP_008464898.1|2.5e-5392.92PREDICTED: thioredoxin H1-like [Cucumis melo][more]
gi|659129894|ref|XP_008464899.1|2.4e-4072.57PREDICTED: thioredoxin H-type-like [Cucumis melo][more]
gi|449464454|ref|XP_004149944.1|1.0e-3870.80PREDICTED: thioredoxin H-type-like [Cucumis sativus][more]
gi|659129896|ref|XP_008464900.1|5.5e-3769.64PREDICTED: thioredoxin H1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0015035protein disulfide oxidoreductase activity
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.164900.3Cucsa.164900.3mRNA
Cucsa.164900.2Cucsa.164900.2mRNA
Cucsa.164900.1Cucsa.164900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 1..69
score: 7.5
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 7..70
score: 4.7
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 3..71
score: 4.5
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 8..70
score: 1.9
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 31..49
scor
NoneNo IPR availablePANTHERPTHR10438:SF274THIOREDOXIN H1coord: 1..69
score: 7.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.164900Cla003972Watermelon (97103) v1cgywmB306
Cucsa.164900Csa5G189900Cucumber (Chinese Long) v2cgycuB251
Cucsa.164900ClCG07G003750Watermelon (Charleston Gray)cgywcgB294
Cucsa.164900CSPI05G10090Wild cucumber (PI 183967)cgycpiB258
Cucsa.164900CsaV3_5G008560Cucumber (Chinese Long) v3cgycucB264
Cucsa.164900Cla97C07G132090Watermelon (97103) v2cgywmbB295
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.164900Cucurbita pepo (Zucchini)cgycpeB0457
Cucsa.164900Cucurbita pepo (Zucchini)cgycpeB0458
Cucsa.164900Bottle gourd (USVL1VR-Ls)cgylsiB276
Cucsa.164900Melon (DHL92) v3.6.1cgymedB285
Cucsa.164900Melon (DHL92) v3.6.1cgymedB288
Cucsa.164900Silver-seed gourdcarcgyB0108
Cucsa.164900Silver-seed gourdcarcgyB0746
Cucsa.164900Cucumber (Chinese Long) v3cgycucB262
Cucsa.164900Watermelon (97103) v2cgywmbB294
Cucsa.164900Wax gourdcgywgoB339
Cucsa.164900Wax gourdcgywgoB341
Cucsa.164900Cucumber (Gy14) v1cgycgyB015
Cucsa.164900Cucumber (Gy14) v1cgycgyB084
Cucsa.164900Cucumber (Gy14) v1cgycgyB105
Cucsa.164900Cucurbita maxima (Rimu)cgycmaB0467
Cucsa.164900Cucurbita maxima (Rimu)cgycmaB0471
Cucsa.164900Cucurbita maxima (Rimu)cgycmaB0472
Cucsa.164900Cucurbita moschata (Rifu)cgycmoB0468
Cucsa.164900Cucurbita moschata (Rifu)cgycmoB0473
Cucsa.164900Cucurbita moschata (Rifu)cgycmoB0474
Cucsa.164900Cucurbita moschata (Rifu)cgycmoB0475
Cucsa.164900Wild cucumber (PI 183967)cgycpiB254
Cucsa.164900Wild cucumber (PI 183967)cgycpiB255
Cucsa.164900Wild cucumber (PI 183967)cgycpiB261
Cucsa.164900Cucumber (Chinese Long) v2cgycuB247
Cucsa.164900Cucumber (Chinese Long) v2cgycuB248
Cucsa.164900Cucumber (Chinese Long) v2cgycuB254
Cucsa.164900Melon (DHL92) v3.5.1cgymeB290
Cucsa.164900Melon (DHL92) v3.5.1cgymeB292
Cucsa.164900Melon (DHL92) v3.5.1cgymeB293
Cucsa.164900Melon (DHL92) v3.5.1cgymeB294
Cucsa.164900Melon (DHL92) v3.5.1cgymeB295
Cucsa.164900Watermelon (Charleston Gray)cgywcgB288
Cucsa.164900Watermelon (Charleston Gray)cgywcgB293
Cucsa.164900Watermelon (97103) v1cgywmB303
Cucsa.164900Watermelon (97103) v1cgywmB309
Cucsa.164900Watermelon (97103) v1cgywmB312