Cucsa.162720 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.162720
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionEthylene-responsive transcription factor
Locationscaffold01144 : 2244472 .. 2245155 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCAGGCATTTTCACAGACACCTTTCCTTCACTATAATTTTCTTCGGGACTAGCTATCTATCTATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGACATTGGGGTTCATGGGTCTCCGAAATTCGTCACCCTTTATTGTAAATAACCCAACTTTCTTCAAATTTTTCATCTCTTCTTTTAAACCCCATTTCCTCAAAATCTTTCTATCTCTGTGTTTATGCTCTGTTTTTCTTTTTCTTTCAGGAAAACCAGAATTTGGCTTGGTACTTTCGAAACGGCTGAAGATGCTGCTAGAGCTTACGATGAAGCTGCTCGTTTAATGTGCGGTCCAAGAGCAAGAACCAATTTCCCTTTCAACTCAAATGACTCAAATTCCTCTTCTTCTAAACTTCTCTCGGCCAATTTGACTGCTAAACTCCACCGTTGCTGTATGGCGTCCCTTCATTTTCAGAAACCGGCCACCCATCGCTTCAATTCCGGCGTTGACGTGGCCGGGATTAAGCCGCTGACGGTGGAGGGAAATACCCAAACGGAGATCGGGCATCAGCCGTTCGTGGCCCTGGAAGAAGATCATATTGAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTTGAGCTCTGCTCTGTTGTGCCACCCTCTCAGGCGTTTTGATATTAATTTAGAAAACAAT

mRNA sequence

TTTCAGGCATTTTCACAGACACCTTTCCTTCACTATAATTTTCTTCGGGACTAGCTATCTATCTATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGACATTGGGGTTCATGGGTCTCCGAAATTCGTCACCCTTTATTGAAAACCAGAATTTGGCTTGGTACTTTCGAAACGGCTGAAGATGCTGCTAGAGCTTACGATGAAGCTGCTCGTTTAATGTGCGGTCCAAGAGCAAGAACCAATTTCCCTTTCAACTCAAATGACTCAAATTCCTCTTCTTCTAAACTTCTCTCGGCCAATTTGACTGCTAAACTCCACCGTTGCTGTATGGCGTCCCTTCATTTTCAGAAACCGGCCACCCATCGCTTCAATTCCGGCGTTGACGTGGCCGGGATTAAGCCGCTGACGGTGGAGGGAAATACCCAAACGGAGATCGGGCATCAGCCGTTCGTGGCCCTGGAAGAAGATCATATTGAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTTGAGCTCTGCTCTGTTGTGCCACCCTCTCAGGCGTTTTGATATTAATTTAGAAAACAAT

Coding sequence (CDS)

ATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGACATTGGGGTTCATGGGTCTCCGAAATTCGTCACCCTTTATTGAAAACCAGAATTTGGCTTGGTACTTTCGAAACGGCTGAAGATGCTGCTAGAGCTTACGATGAAGCTGCTCGTTTAATGTGCGGTCCAAGAGCAAGAACCAATTTCCCTTTCAACTCAAATGACTCAAATTCCTCTTCTTCTAAACTTCTCTCGGCCAATTTGACTGCTAAACTCCACCGTTGCTGTATGGCGTCCCTTCATTTTCAGAAACCGGCCACCCATCGCTTCAATTCCGGCGTTGACGTGGCCGGGATTAAGCCGCTGACGGTGGAGGGAAATACCCAAACGGAGATCGGGCATCAGCCGTTCGTGGCCCTGGAAGAAGATCATATTGAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTTGAGCTCTGCTCTGTTGTGCCACCCTCTCAGGCGTTTTGA

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEGNTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF*
Homology
[Close]
BLAST of Cucsa.162720 vs. Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.0e-55
Identity = 115/177 (64.97%), Postives = 129/177 (72.88%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRF------NSGVDVAGI- 120
           TNFP+N N   +SSSKLLSA LTAKLH+C MASL   K    +       +   D  G+ 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 -------KPLTVEGNTQTEIGH----QPFVALEEDHIEQMIEELIHYGSVELCSVVP 160
                  + +T     + E G+    Q F  LEEDHIEQMIEEL+HYGS+ELCSV+P
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 177

[Close]
BLAST of Cucsa.162720 vs. Swiss-Prot
Match: PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.8e-42
Identity = 97/164 (59.15%), Postives = 107/164 (65.24%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG RAR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPAT-----------HRFNSGVD 120
           TNFP+N N S SSSSKLLSA L AKLHRC MASL   +P++           +    G+ 
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASPNNAVKGIG 120

Query: 121 V-AGIKPLTVEGNTQTEIGH-----------QPFVALEEDHIEQ 142
             A + P   E   Q   G+           Q F  LEEDHI Q
Sbjct: 121 ADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]
BLAST of Cucsa.162720 vs. Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 8.8e-28
Identity = 62/102 (60.78%), Postives = 75/102 (73.53%), Query Frame = 1 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NSND-----------------SNSSSSKLLSANLTAKLHRCC 91
           N+N+                 S+S+SS  LS+ L+AKL +CC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCC 106

[Close]
BLAST of Cucsa.162720 vs. Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 59/93 (63.44%), Postives = 67/93 (72.04%), Query Frame = 1 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP- 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 FNSNDSNS-------SSSKLLSANLTAKLHRCC 91
            SN SNS        S K LS  L AKL + C
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRKNC 97

[Close]
BLAST of Cucsa.162720 vs. Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.8e-23
Identity = 56/95 (58.95%), Postives = 65/95 (68.42%), Query Frame = 1 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NSNDSNSS----------SSKLLSANLTAKLHRCC 91
            ++  S           S K LS  L AKL + C
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSC 99

[Close]
BLAST of Cucsa.162720 vs. TrEMBL
Match: A0A0A0LQD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382550 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.1e-90
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG 120
           TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG
Sbjct: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG 120

Query: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF 165
           NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF
Sbjct: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF 164

[Close]
BLAST of Cucsa.162720 vs. TrEMBL
Match: D5L105_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D21 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-57
Identity = 120/176 (68.18%), Postives = 130/176 (73.86%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHR-------FNSGVDVAGI 120
           TNFP+N N S SS+SKLLSA LTAKLHRC MASL   K +           +SG  +  I
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPQALASSGAKMPDI 120

Query: 121 KPLT---------VEGNTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPP 161
           KP           V    + E   Q F  LE+DHIEQMIEEL+HYGS+ELCSV+PP
Sbjct: 121 KPEIHQPVAEENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIELCSVLPP 176

[Close]
BLAST of Cucsa.162720 vs. TrEMBL
Match: A0A067FJG7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029507mg PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 4.8e-57
Identity = 126/190 (66.32%), Postives = 138/190 (72.63%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQK----------PATH-------- 120
           TNFP+N N S+SSSSKLLSA LTAKLHRC MASL   K          PA+H        
Sbjct: 61  TNFPYNPNASHSSSSKLLSATLTAKLHRCYMASLQMTKSSAANEPQKAPASHVSTPSGNA 120

Query: 121 -RFNS-GVDVAGIKPLTVEGNT----------QTEIGHQPFVALEEDHIEQMIEELIHYG 161
            R N  G  +  ++P+ V+G+T          Q EI  Q F  LE+DHIEQMIEEL+ YG
Sbjct: 121 TRINEMGKHLLEMRPMQVQGSTEPINRAVKKEQVEIAQQ-FKPLEDDHIEQMIEELLDYG 180

[Close]
BLAST of Cucsa.162720 vs. TrEMBL
Match: V4UBY1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009593mg PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 6.3e-57
Identity = 126/190 (66.32%), Postives = 138/190 (72.63%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQK----------PATH-------- 120
           TNFP+N N S+SSSSKLLSA LTAKLHRC MASL   K          PA+H        
Sbjct: 61  TNFPYNPNASHSSSSKLLSATLTAKLHRCYMASLQMTKSSAANEPQKAPASHVSTPSGNA 120

Query: 121 -RFNS-GVDVAGIKPLTVEGNT----------QTEIGHQPFVALEEDHIEQMIEELIHYG 161
            R N  G  +  ++P+ V+G+T          Q EI  Q F  LE+DHIEQMIEEL+ YG
Sbjct: 121 TRVNEMGKHLLEMRPMQVQGSTEPINRAVKKEQVEIAQQ-FKPLEDDHIEQMIEELLDYG 180

[Close]
BLAST of Cucsa.162720 vs. TrEMBL
Match: A0A078EY16_BRANA (BnaA02g32120D protein OS=Brassica napus GN=BnaA02g32120D PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.7e-55
Identity = 118/181 (65.19%), Postives = 131/181 (72.38%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPA-THRFNSGV------DVAGI 120
           TNFP+N N   S SSKLLSA LTAKLH+C MASL   K + T   N+ +      D  G+
Sbjct: 61  TNFPYNPNAIPSPSSKLLSATLTAKLHKCYMASLQMTKQSQTQTQNTRLLPLSLPDTHGV 120

Query: 121 KPLTVEGNTQTEIG---------------HQPFVALEEDHIEQMIEELIHYGSVELCSVV 160
             +T++G TQ   G                Q F  LEEDHIEQMIEEL+HYGS+E CSV+
Sbjct: 121 NNVTLDGGTQYNTGGGVTEMKCEDGNANLKQNFRPLEEDHIEQMIEELLHYGSIEFCSVL 180

[Close]
BLAST of Cucsa.162720 vs. TAIR10
Match: AT5G25190.1 (AT5G25190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 215.3 bits (547), Expect = 2.8e-56
Identity = 115/177 (64.97%), Postives = 129/177 (72.88%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRF------NSGVDVAGI- 120
           TNFP+N N   +SSSKLLSA LTAKLH+C MASL   K    +       +   D  G+ 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 -------KPLTVEGNTQTEIGH----QPFVALEEDHIEQMIEELIHYGSVELCSVVP 160
                  + +T     + E G+    Q F  LEEDHIEQMIEEL+HYGS+ELCSV+P
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 177

[Close]
BLAST of Cucsa.162720 vs. TAIR10
Match: AT1G15360.1 (AT1G15360.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 124.8 bits (312), Expect = 5.0e-29
Identity = 62/102 (60.78%), Postives = 75/102 (73.53%), Query Frame = 1 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NSND-----------------SNSSSSKLLSANLTAKLHRCC 91
           N+N+                 S+S+SS  LS+ L+AKL +CC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCC 106

[Close]
BLAST of Cucsa.162720 vs. TAIR10
Match: AT5G25390.2 (AT5G25390.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 110.9 bits (276), Expect = 7.4e-25
Identity = 59/93 (63.44%), Postives = 67/93 (72.04%), Query Frame = 1 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP- 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 FNSNDSNS-------SSSKLLSANLTAKLHRCC 91
            SN SNS        S K LS  L AKL + C
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRKNC 97

[Close]
BLAST of Cucsa.162720 vs. TAIR10
Match: AT5G11190.1 (AT5G11190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-24
Identity = 56/95 (58.95%), Postives = 65/95 (68.42%), Query Frame = 1 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NSNDSNSS----------SSKLLSANLTAKLHRCC 91
            ++  S           S K LS  L AKL + C
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSC 99

[Close]
BLAST of Cucsa.162720 vs. TAIR10
Match: AT1G78080.1 (AT1G78080.1 related to AP2 4)

HSP 1 Score: 94.0 bits (232), Expect = 9.4e-20
Identity = 50/102 (49.02%), Postives = 65/102 (63.73%), Query Frame = 1 

Query: 2   ARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRART 61
           ++P + YRGVRQRHWG WV+EIR P  +TR+WLGTF+TAE+AA AYD+AA  + G  AR 
Sbjct: 146 SKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARL 205

Query: 62  NFP-FNSNDSNSSSS----KLLSANLTAKLHRCCMASLHFQK 99
           NFP    N S+        K L +++ AKL   C +    QK
Sbjct: 206 NFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQK 247

[Close]
BLAST of Cucsa.162720 vs. NCBI nr
Match: gi|449442154|ref|XP_004138847.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 1.6e-90
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG 120
           TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG
Sbjct: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG 120

Query: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF 165
           NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF
Sbjct: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF 164

[Close]
BLAST of Cucsa.162720 vs. NCBI nr
Match: gi|659088964|ref|XP_008445254.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 339.0 bits (868), Expect = 4.8e-90
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG 120
           TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSG DVAGIKPLTVEG
Sbjct: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGADVAGIKPLTVEG 120

Query: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF 165
           NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF
Sbjct: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQAF 164

[Close]
BLAST of Cucsa.162720 vs. NCBI nr
Match: gi|657971770|ref|XP_008377674.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Malus domestica])

HSP 1 Score: 230.7 bits (587), Expect = 1.8e-57
Identity = 120/176 (68.18%), Postives = 130/176 (73.86%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHR-------FNSGVDVAGI 120
           TNFP+N N S SS+SKLLSA LTAKLHRC MASL   K +           +SG  +  I
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPQALASSGAKMPDI 120

Query: 121 KPLT---------VEGNTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPP 161
           KP           V    + E   Q F  LE+DHIEQMIEEL+HYGS+ELCSV+PP
Sbjct: 121 KPEIHQPVAEENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIELCSVLPP 176

[Close]
BLAST of Cucsa.162720 vs. NCBI nr
Match: gi|568859853|ref|XP_006483447.1| (PREDICTED: ethylene-responsive transcription factor ERF003 [Citrus sinensis])

HSP 1 Score: 228.8 bits (582), Expect = 6.9e-57
Identity = 126/190 (66.32%), Postives = 138/190 (72.63%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQK----------PATH-------- 120
           TNFP+N N S+SSSSKLLSA LTAKLHRC MASL   K          PA+H        
Sbjct: 61  TNFPYNPNASHSSSSKLLSATLTAKLHRCYMASLQMTKSSAANEPQKAPASHVSTPSGNA 120

Query: 121 -RFNS-GVDVAGIKPLTVEGNT----------QTEIGHQPFVALEEDHIEQMIEELIHYG 161
            R N  G  +  ++P+ V+G+T          Q EI  Q F  LE+DHIEQMIEEL+ YG
Sbjct: 121 TRINEMGKHLLEMRPMQVQGSTEPINRAVKKEQVEIAQQ-FKPLEDDHIEQMIEELLDYG 180

[Close]
BLAST of Cucsa.162720 vs. NCBI nr
Match: gi|694312827|ref|XP_009363957.1| (PREDICTED: ethylene-responsive transcription factor ERF003 [Pyrus x bretschneideri])

HSP 1 Score: 228.8 bits (582), Expect = 6.9e-57
Identity = 120/176 (68.18%), Postives = 130/176 (73.86%), Query Frame = 1 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHF--------QKPATHRFNSGVDVAG 120
           TNFP+N N S SS+SKLLSA LTAKLHRC MASL          +KP T   +       
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPKTLVSSGAKMPEM 120

Query: 121 IKPLTVEG--------NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPP 161
           I+P   +G          + E   Q F  LE+DHIEQMIEEL+HYGS+ELCSVVPP
Sbjct: 121 IRPEIQQGGEENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIELCSVVPP 176

The following BLAST results are available for this feature:
BLAST of Cucsa.162720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF03_ARATH5.0e-5564.97Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF00... [more]
PZ02_LUPPO4.8e-4259.15Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1[more]
WIN1_ARATH8.8e-2860.78Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE... [more]
SHN3_ARATH1.3e-2363.44Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3... [more]
SHN2_ARATH3.8e-2358.95Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2... [more]
BLAST of Cucsa.162720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQD0_CUCSA1.1e-90100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382550 PE=4 SV=1[more]
D5L105_MALDO1.3e-5768.18AP2 domain class transcription factor OS=Malus domestica GN=AP2D21 PE=2 SV=1[more]
A0A067FJG7_CITSI4.8e-5766.32Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029507mg PE=4 SV=1[more]
V4UBY1_9ROSI6.3e-5766.32Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009593mg PE=4 SV=1[more]
A0A078EY16_BRANA2.7e-5565.19BnaA02g32120D protein OS=Brassica napus GN=BnaA02g32120D PE=4 SV=1[more]
BLAST of Cucsa.162720 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25190.12.8e-5664.97 Integrase-type DNA-binding superfamily protein[more]
AT1G15360.15.0e-2960.78 Integrase-type DNA-binding superfamily protein[more]
AT5G25390.27.4e-2563.44 Integrase-type DNA-binding superfamily protein[more]
AT5G11190.12.2e-2458.95 Integrase-type DNA-binding superfamily protein[more]
AT1G78080.19.4e-2049.02 related to AP2 4[more]
BLAST of Cucsa.162720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442154|ref|XP_004138847.1|1.6e-90100.00PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis sativus... [more]
gi|659088964|ref|XP_008445254.1|4.8e-9099.39PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo][more]
gi|657971770|ref|XP_008377674.1|1.8e-5768.18PREDICTED: ethylene-responsive transcription factor ERF003-like [Malus domestica... [more]
gi|568859853|ref|XP_006483447.1|6.9e-5766.32PREDICTED: ethylene-responsive transcription factor ERF003 [Citrus sinensis][more]
gi|694312827|ref|XP_009363957.1|6.9e-5768.18PREDICTED: ethylene-responsive transcription factor ERF003 [Pyrus x bretschneide... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.162720.1Cucsa.162720.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 30..46
score: 2.5E-11coord: 8..19
score: 2.5
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 7..64
score: 1.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 7..56
score: 1.6
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 7..70
score: 3.8
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 7..64
score: 2
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 7..65
score: 3.6
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 1..157
score: 5.3
NoneNo IPR availablePANTHERPTHR31194:SF4ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003coord: 1..157
score: 5.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.162720CmaCh12G003560Cucurbita maxima (Rimu)cgycmaB0447
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.162720Melon (DHL92) v3.5.1cgymeB273
Cucsa.162720Melon (DHL92) v3.5.1cgymeB276
Cucsa.162720Melon (DHL92) v3.5.1cgymeB283
Cucsa.162720Melon (DHL92) v3.5.1cgymeB284
Cucsa.162720Watermelon (Charleston Gray)cgywcgB279
Cucsa.162720Watermelon (Charleston Gray)cgywcgB281
Cucsa.162720Watermelon (Charleston Gray)cgywcgB282
Cucsa.162720Watermelon (97103) v1cgywmB289
Cucsa.162720Watermelon (97103) v1cgywmB292
Cucsa.162720Watermelon (97103) v1cgywmB293
Cucsa.162720Cucurbita pepo (Zucchini)cgycpeB0430
Cucsa.162720Cucurbita pepo (Zucchini)cgycpeB0431
Cucsa.162720Cucurbita pepo (Zucchini)cgycpeB0439
Cucsa.162720Cucurbita pepo (Zucchini)cgycpeB0442
Cucsa.162720Cucurbita pepo (Zucchini)cgycpeB0444
Cucsa.162720Bottle gourd (USVL1VR-Ls)cgylsiB264
Cucsa.162720Bottle gourd (USVL1VR-Ls)cgylsiB267
Cucsa.162720Melon (DHL92) v3.6.1cgymedB273
Cucsa.162720Melon (DHL92) v3.6.1cgymedB279
Cucsa.162720Silver-seed gourdcarcgyB0171
Cucsa.162720Silver-seed gourdcarcgyB0709
Cucsa.162720Silver-seed gourdcarcgyB1091
Cucsa.162720Cucumber (Chinese Long) v3cgycucB247
Cucsa.162720Cucumber (Chinese Long) v3cgycucB254
Cucsa.162720Cucumber (Chinese Long) v3cgycucB255
Cucsa.162720Watermelon (97103) v2cgywmbB280
Cucsa.162720Watermelon (97103) v2cgywmbB282
Cucsa.162720Watermelon (97103) v2cgywmbB286
Cucsa.162720Wax gourdcgywgoB313
Cucsa.162720Wax gourdcgywgoB322
Cucsa.162720Cucumber (Gy14) v1cgycgyB034
Cucsa.162720Cucumber (Gy14) v1cgycgyB099
Cucsa.162720Cucurbita maxima (Rimu)cgycmaB0444
Cucsa.162720Cucurbita maxima (Rimu)cgycmaB0457
Cucsa.162720Cucurbita maxima (Rimu)cgycmaB0462
Cucsa.162720Cucurbita moschata (Rifu)cgycmoB0446
Cucsa.162720Cucurbita moschata (Rifu)cgycmoB0448
Cucsa.162720Cucurbita moschata (Rifu)cgycmoB0463
Cucsa.162720Wild cucumber (PI 183967)cgycpiB239
Cucsa.162720Wild cucumber (PI 183967)cgycpiB245
Cucsa.162720Wild cucumber (PI 183967)cgycpiB246
Cucsa.162720Wild cucumber (PI 183967)cgycpiB251
Cucsa.162720Cucumber (Chinese Long) v2cgycuB233
Cucsa.162720Cucumber (Chinese Long) v2cgycuB240