Cucsa.144030 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.144030
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold01080 : 422179 .. 422387 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCATTCTAAGATCATTAAGATGATTAGAATCAAAAACCTTCTTCTGCTTGCCCTTGTCATCTTCTTCGTTTTTGGTGTCGGAGTTTGCAGCTCTGCCTGTCGTTTGCCGTGCCACCGCGTGGCACTTGGCAGAGCTCAAGAACATGAAGAAATAGGAGATGGTTCATTGGATGATGATTCGAAGGACAATGATCCTTATAGAAT

mRNA sequence

ATGGGTCATTCTAAGATCATTAAGATGATTAGAATCAAAAACCTTCTTCTGCTTGCCCTTGTCATCTTCTTCGTTTTTGGTGTCGGAGTTTGCAGCTCTGCCTGTCGTTTGCCGTGCCACCGCGTGGCACTTGGCAGAGCTCAAGAACATGAAGAAATAGGAGATGGTTCATTGGATGATGATTCGAAGGACAATGATCCTTATAGAAT

Coding sequence (CDS)

ATGGGTCATTCTAAGATCATTAAGATGATTAGAATCAAAAACCTTCTTCTGCTTGCCCTTGTCATCTTCTTCGTTTTTGGTGTCGGAGTTTGCAGCTCTGCCTGTCGTTTGCCGTGCCACCGCGTGGCACTTGGCAGAGCTCAAGAACATGAAGAAATAGGAGATGGTTCATTGGATGATGATTCGAAGGACAATGATCCTTATAGAAT

Protein sequence

MGHSKIIKMIRIKNLLLLALVIFFVFGVGVCSSACRLPCHRVALGRAQEHEEIGDGSLDDDSKDNDPYRX
Homology
[Close]
BLAST of Cucsa.144030 vs. TrEMBL
Match: A0A0A0KQN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G220900 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 8.7e-32
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MGHSKIIKMIRIKNLLLLALVIFFVFGVGVCSSACRLPCHRVALGRAQEHEEIGDGSLDD 60
          MGHSKIIKMIRIKNLLLLALVIFFVFGVGVCSSACRLPCHRVALGRAQEHEEIGDGSLDD
Sbjct: 1  MGHSKIIKMIRIKNLLLLALVIFFVFGVGVCSSACRLPCHRVALGRAQEHEEIGDGSLDD 60

Query: 61 DSKDNDPYR 70
          DSKDNDPYR
Sbjct: 61 DSKDNDPYR 69

[Close]
BLAST of Cucsa.144030 vs. NCBI nr
Match: gi|700195550|gb|KGN50727.1| (hypothetical protein Csa_5G220900 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MGHSKIIKMIRIKNLLLLALVIFFVFGVGVCSSACRLPCHRVALGRAQEHEEIGDGSLDD 60
          MGHSKIIKMIRIKNLLLLALVIFFVFGVGVCSSACRLPCHRVALGRAQEHEEIGDGSLDD
Sbjct: 1  MGHSKIIKMIRIKNLLLLALVIFFVFGVGVCSSACRLPCHRVALGRAQEHEEIGDGSLDD 60

Query: 61 DSKDNDPYR 70
          DSKDNDPYR
Sbjct: 61 DSKDNDPYR 69

The following BLAST results are available for this feature:
BLAST of Cucsa.144030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQN4_CUCSA8.7e-32100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G220900 PE=4 SV=1[more]
BLAST of Cucsa.144030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195550|gb|KGN50727.1|1.2e-31100.00hypothetical protein Csa_5G220900 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.144030.1Cucsa.144030.1mRNA