Cucsa.143240 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.143240
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionHistone H3
Locationscaffold01079 : 1557301 .. 1557954 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAACAACAATCAAACTTCTTCAAATCCAAGATCTCCGAAATTCCCTTCTGAATCTCTATCACAAATGGCAAGAACAAAGCAAACAGCAAGAAAATCAACGGGAGGAAAGGCGCCAAGGAAGCAGCTAGCAACAAAGGCAGCGAGGAAGTCAGCTCCGGCGACCGGAGGAGTGAAGAAGCCGCATAGATTCCGTCCAGGGACGGTGGCACTGAGGGAAATCAGGAAGTACCAAAAGAGCACGGAGCTTCTAATAAGAAAGCTTCCGTTTCAAAGGCTGGTGAGGGAGATCGCTCAGGATTTCAAGACGGATCTCCGGTTTCAGAGCAGCGCGGTGGCGGCTCTTCAGGAGGCGGCGGAGGCGTATTTGGTAGGGTTGTTTGAGGATACAAATCTTTGTGCTATTCATGCAAAGAGAGTTACGATTATGCCTAAGGATATTCAATTGGCCAGGAGAATTAGAGGGGAGAGGGCTTGAGATTTGTCGAATGGAGTAGTTAGTTAATTGGAATGTGGATTTGTGTACACTAGAACGCAATTAGGGTTCTTGTTCTTCAAAAAAACAAGAAATAGTGAAGTTTAATCTAAGCTAAAGTTCATTGGTTTCTTTTTCTAGTTGTGGATGCTTTTTTTttAAACTAACTTTTTAAAATTGT

mRNA sequence

CGAACAACAATCAAACTTCTTCAAATCCAAGATCTCCGAAATTCCCTTCTGAATCTCTATCACAAATGGCAAGAACAAAGCAAACAGCAAGAAAATCAACGGGAGGAAAGGCGCCAAGGAAGCAGCTAGCAACAAAGGCAGCGAGGAAGTCAGCTCCGGCGACCGGAGGAGTGAAGAAGCCGCATAGATTCCGTCCAGGGACGGTGGCACTGAGGGAAATCAGGAAGTACCAAAAGAGCACGGAGCTTCTAATAAGAAAGCTTCCGTTTCAAAGGCTGGTGAGGGAGATCGCTCAGGATTTCAAGACGGATCTCCGGTTTCAGAGCAGCGCGGTGGCGGCTCTTCAGGAGGCGGCGGAGGCGTATTTGGTAGGGTTGTTTGAGGATACAAATCTTTGTGCTATTCATGCAAAGAGAGTTACGATTATGCCTAAGGATATTCAATTGGCCAGGAGAATTAGAGGGGAGAGGGCTTGAGATTTGTCGAATGGAGTAGTTAGTTAATTGGAATGTGGATTTGTGTACACTAGAACGCAATTAGGGTTCTTGTTCTTCAAAAAAACAAGAAATAGTGAAGTTTAATCTAAGCTAAAGTTCATTGGTTTCTTTTTCTAGTTGTGGATGCTTTTTTTTTAAACTAACTTTTTAAAATTGT

Coding sequence (CDS)

ATGGCAAGAACAAAGCAAACAGCAAGAAAATCAACGGGAGGAAAGGCGCCAAGGAAGCAGCTAGCAACAAAGGCAGCGAGGAAGTCAGCTCCGGCGACCGGAGGAGTGAAGAAGCCGCATAGATTCCGTCCAGGGACGGTGGCACTGAGGGAAATCAGGAAGTACCAAAAGAGCACGGAGCTTCTAATAAGAAAGCTTCCGTTTCAAAGGCTGGTGAGGGAGATCGCTCAGGATTTCAAGACGGATCTCCGGTTTCAGAGCAGCGCGGTGGCGGCTCTTCAGGAGGCGGCGGAGGCGTATTTGGTAGGGTTGTTTGAGGATACAAATCTTTGTGCTATTCATGCAAAGAGAGTTACGATTATGCCTAAGGATATTCAATTGGCCAGGAGAATTAGAGGGGAGAGGGCTTGA

Protein sequence

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
Homology
[Close]
BLAST of Cucsa.143240 vs. Swiss-Prot
Match: H32_ARATH (Histone H3.2 OS=Arabidopsis thaliana GN=HTR2 PE=1 SV=2)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. Swiss-Prot
Match: H32_ASPOF (Histone H3.2 OS=Asparagus officinalis PE=2 SV=3)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. Swiss-Prot
Match: H32_BRANA (Histone H3.2 OS=Brassica napus PE=2 SV=3)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. Swiss-Prot
Match: H32_EUPES (Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. Swiss-Prot
Match: H32_PETCR (Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. TrEMBL
Match: A0A096TUS0_MAIZE (Histone H3.2 OS=Zea mays GN=H3C4 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 34  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 93

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 94  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 153

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 154 MPKDIQLARRIRGERA 169

[Close]
BLAST of Cucsa.143240 vs. TrEMBL
Match: A0A068USU6_COFCA (Histone H3 OS=Coffea canephora GN=GSCOC_T00025071001 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. TrEMBL
Match: A0A0D9ZKN6_9ORYZ (Histone H3 OS=Oryza glumipatula PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. TrEMBL
Match: E6NU67_JATCU (Histone H3 OS=Jatropha curcas GN=JHL18I08.11 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. TrEMBL
Match: A0A067FC07_CITSI (Histone H3 OS=Citrus sinensis GN=CISIN_1g032661mg PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. TAIR10
Match: AT1G09200.1 (AT1G09200.1 Histone superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 5.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. TAIR10
Match: AT3G27360.1 (AT3G27360.1 Histone superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 5.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. TAIR10
Match: AT5G10390.1 (AT5G10390.1 Histone superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 5.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. TAIR10
Match: AT5G10400.1 (AT5G10400.1 Histone superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 5.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. TAIR10
Match: AT5G65360.1 (AT5G65360.1 Histone superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 5.7e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of Cucsa.143240 vs. NCBI nr
Match: gi|992271660|gb|KXG31833.1| (hypothetical protein SORBI_003G065000, partial [Sorghum bicolor])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 87  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 146

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 147 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 206

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 207 MPKDIQLARRIRGERA 222

[Close]
BLAST of Cucsa.143240 vs. NCBI nr
Match: gi|643697049|gb|KDP20192.1| (hypothetical protein JCGZ_07912 [Jatropha curcas])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 91  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 150

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 151 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 210

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 211 MPKDIQLARRIRGERA 226

[Close]
BLAST of Cucsa.143240 vs. NCBI nr
Match: gi|670445861|ref|XP_008663191.1| (PREDICTED: histone H3.2-like [Zea mays])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 36  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 95

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 96  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 155

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 156 MPKDIQLARRIRGERA 171

[Close]
BLAST of Cucsa.143240 vs. NCBI nr
Match: gi|944232983|gb|KQK97345.1| (hypothetical protein SETIT_012204mg, partial [Setaria italica])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 182

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 183 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 242

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 243 MPKDIQLARRIRGERA 258

[Close]
BLAST of Cucsa.143240 vs. NCBI nr
Match: gi|923722678|ref|XP_013665518.1| (PREDICTED: histone H3-like centromeric protein CSE4 [Brassica napus])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:
BLAST of Cucsa.143240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
H32_ARATH1.0e-69100.00Histone H3.2 OS=Arabidopsis thaliana GN=HTR2 PE=1 SV=2[more]
H32_ASPOF1.0e-69100.00Histone H3.2 OS=Asparagus officinalis PE=2 SV=3[more]
H32_BRANA1.0e-69100.00Histone H3.2 OS=Brassica napus PE=2 SV=3[more]
H32_EUPES1.0e-69100.00Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3[more]
H32_PETCR1.0e-69100.00Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2[more]
BLAST of Cucsa.143240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A096TUS0_MAIZE1.1e-67100.00Histone H3.2 OS=Zea mays GN=H3C4 PE=3 SV=1[more]
A0A068USU6_COFCA1.1e-67100.00Histone H3 OS=Coffea canephora GN=GSCOC_T00025071001 PE=3 SV=1[more]
A0A0D9ZKN6_9ORYZ1.1e-67100.00Histone H3 OS=Oryza glumipatula PE=3 SV=1[more]
E6NU67_JATCU1.1e-67100.00Histone H3 OS=Jatropha curcas GN=JHL18I08.11 PE=3 SV=1[more]
A0A067FC07_CITSI1.1e-67100.00Histone H3 OS=Citrus sinensis GN=CISIN_1g032661mg PE=3 SV=1[more]
BLAST of Cucsa.143240 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09200.15.7e-71100.00 Histone superfamily protein[more]
AT3G27360.15.7e-71100.00 Histone superfamily protein[more]
AT5G10390.15.7e-71100.00 Histone superfamily protein[more]
AT5G10400.15.7e-71100.00 Histone superfamily protein[more]
AT5G65360.15.7e-71100.00 Histone superfamily protein[more]
BLAST of Cucsa.143240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|992271660|gb|KXG31833.1|1.6e-67100.00hypothetical protein SORBI_003G065000, partial [Sorghum bicolor][more]
gi|643697049|gb|KDP20192.1|1.6e-67100.00hypothetical protein JCGZ_07912 [Jatropha curcas][more]
gi|670445861|ref|XP_008663191.1|1.6e-67100.00PREDICTED: histone H3.2-like [Zea mays][more]
gi|944232983|gb|KQK97345.1|1.6e-67100.00hypothetical protein SETIT_012204mg, partial [Setaria italica][more]
gi|923722678|ref|XP_013665518.1|1.6e-67100.00PREDICTED: histone H3-like centromeric protein CSE4 [Brassica napus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008283 cell proliferation
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0009536 plastid
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.143240.1Cucsa.143240.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.143240Cla006287Watermelon (97103) v1cgywmB251
Cucsa.143240MELO3C014618Melon (DHL92) v3.5.1cgymeB239
Cucsa.143240MELO3C023528Melon (DHL92) v3.5.1cgymeB237
Cucsa.143240CSPI01G30190Wild cucumber (PI 183967)cgycpiB208
Cucsa.143240CSPI07G19480Wild cucumber (PI 183967)cgycpiB211
Cucsa.143240CmaCh17G009390Cucurbita maxima (Rimu)cgycmaB0397
Cucsa.143240CmaCh20G000660Cucurbita maxima (Rimu)cgycmaB0398
Cucsa.143240CmoCh20G000710Cucurbita moschata (Rifu)cgycmoB0398
Cucsa.143240CmoCh17G009150Cucurbita moschata (Rifu)cgycmoB0397
Cucsa.143240CmoCh10G009880Cucurbita moschata (Rifu)cgycmoB0395
Cucsa.143240Lsi06G005110Bottle gourd (USVL1VR-Ls)cgylsiB230
Cucsa.143240Lsi02G025970Bottle gourd (USVL1VR-Ls)cgylsiB228
Cucsa.143240Cp4.1LG18g01540Cucurbita pepo (Zucchini)cgycpeB0382
Cucsa.143240MELO3C023527.2Melon (DHL92) v3.6.1cgymedB234
Cucsa.143240CsaV3_1G042610Cucumber (Chinese Long) v3cgycucB213
Cucsa.143240CsaV3_7G031310Cucumber (Chinese Long) v3cgycucB216
Cucsa.143240Cla97C03G063620Watermelon (97103) v2cgywmbB241
Cucsa.143240Bhi09G000506Wax gourdcgywgoB278
Cucsa.143240Bhi10G000270Wax gourdcgywgoB277
Cucsa.143240Carg02732Silver-seed gourdcarcgyB1039
Cucsa.143240Carg16952Silver-seed gourdcarcgyB0539
Cucsa.143240Carg06919Silver-seed gourdcarcgyB0599
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.143240Cucsa.050110Cucumber (Gy14) v1cgycgyB010
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.143240Melon (DHL92) v3.6.1cgymedB235
Cucsa.143240Silver-seed gourdcarcgyB0212
Cucsa.143240Wax gourdcgywgoB281
Cucsa.143240Wax gourdcgywgoB282
Cucsa.143240Cucurbita maxima (Rimu)cgycmaB0395
Cucsa.143240Cucurbita maxima (Rimu)cgycmaB0396
Cucsa.143240Cucurbita maxima (Rimu)cgycmaB0399
Cucsa.143240Cucurbita moschata (Rifu)cgycmoB0396
Cucsa.143240Cucurbita moschata (Rifu)cgycmoB0399
Cucsa.143240Cucumber (Chinese Long) v2cgycuB208
Cucsa.143240Cucumber (Chinese Long) v2cgycuB205
Cucsa.143240Melon (DHL92) v3.5.1cgymeB238
Cucsa.143240Watermelon (Charleston Gray)cgywcgB242
Cucsa.143240Cucurbita pepo (Zucchini)cgycpeB0385
Cucsa.143240Cucurbita pepo (Zucchini)cgycpeB0386