Cucsa.131910 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.131910
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Zinc finger CCCH domain-containing protein 39
Location	scaffold01037 : 39837 .. 41985 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTCCGTCTTTTGACTAACTCGCCTACAAAAATTCCCTTGTGGCGATTCAGAAGATTCCATGGTTTTGGCCTTCCTCAATCCTTCCGATTTTCATTAGGGTTTTCGTTTCTCCTTGGCGGCTAGGGTTTTGATTCTTCATTCACTTTGTTGTTTTTCTTTTCAACATCTCATTATAAATATATAACTATAACTCTTTCACTTTCGCCATTGTTATGATTCCTTCTTCCATTGATCTTCATTCCGCTGTTTTTTTTTATTGATATTTCAAACACCCTTTTGTTTATTTATCCAACTCAACGTTAATTTGCCTACTTTTCTTGTTTTCTTGTTTTTTCTTCTTCTTGCCAATTGTTGGTATAAGGGAGGATGATCACGTCGATTGATTGAAATTTCCTTTGGGTTGATTCGTTGTTTGTTGTTGATTCATTGTTCTGATTGATTAAAGAGAACTGGGTTTTGTTTTAGAAGATGAGTTTCAATGATATGAGAGCCTCTGTTATACCGCCGCCTCTGCATTCCTATGGTTCTAATGGCGATGCGTCTGGTTGCTGGTCTCAGTTTCCTAGGAATGATCCATTTGATCCACAATCACAATTTGAAGTACAACAGCCTCCGTATAAAAGAGCTAGAAATTCTGAAGAAAACCCATCTAGTCCTATCTCTTATTCAAATCCCTCCTTAAATTCTAGGGGGCAACCACCAAATGCTCCAGTGAATAAAGGAATAAGTAATATCTTTTTCAAGACGAGGATGTGTGCGAAATTTAAGCTTGGTTTGTGTAGGAATGGTGCTAGTTGTAACTTTGCTCATGGTGTTGAAGATATGAGACAACCTCCACCAAATTGGCAAGAAATTGTTGGTATAAAGGAGGATGATCAATCAGTAAATAATTGGAATGATGATCAGAAGATAATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGAGAGGAGTGCCCCTATGGAGATAGGTGTAATTTTCTTCATGAAGATCCTGCAAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAGAGTTCAGCTATAAGTATTGGAACTACAGGAACTCCATTGATGAATGGAAATGATTCTTCTAGTTATATTGAACCTAGCAGGGTAACTTCTTGTTCTGTTTCTGATGCTCTTCGAGCTAATGGGAATGTTAGGCCTTCATTCTGGAAGACAAAGTTATGCACCAAGTGGGAGATTACAGGCCATTGCCCCTTTGGTGACAAGTGCCATTTTGCTCATGGCCAATCTGGTATTCATAGCTCTTTTTCTTCTCTTTTTTGTCTTAATGGTCAAGGATTATAGTTCTTTTATCTGAATGAAACCCAATAGTTGGCTTTAACATGTGAATTAGAGTTCTGATTAGCCATTTGATGAACTGACACTCATGATATGCCTTGAGTGATCTTTATTGTTAACATAACCAATGTCAATCATTTGTTTCTTAATTTGTTTAGGCCATGTTCGGTAATATGATTTTGTGAAATTTTAGCCAATTTTTTTTTAAAAAAGGGAGTTTTAAGAGCTACTTTCTTTGTTTTTGAAAATGTGAGGTAACAAAGCAAGAAATTTAGTGGTCATATGGATATTAGAAAACCAAGAACCAAATGGTTTCTGACAGTGGATCTAGTATTTATGTTGTGTCTTTTATGAAGCTTTGAACATTGTGATTAATGATTTGCATACTACTTTGAGAGATGCTGACTGATATTAATGAATCAGAGTTACAACTATATATTGGACGTGAGGGGGAAGTATCTACTGCTGCCCTCAACGTAAAGCCTCTAATTGTAGCCATGGAGGCATCTTCGAGTTTGACAACCAATGTAGTTCCATCCTCTGCCTTACCGGAGGGCCAGGAGAAGCCGAGTTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCTGATTGGCTCGATGATTTGCCTCTATCTCCAAGCTCAACAAGCAAAATGGAGGGTTGAGCCTTTTTTTCTTTTTCAGTTGAAGTTAAGTTTTTGAGTTGGTTTGCTGAGGGATTCAATTGATTAGTTACAATATGGGAGTTGGGTTGGTGGTGGTCTTTCTGAATTAGGGTGTAAAATTTTTTTGGTGAGAATTGATTGGGAATATGGATAGAAGAAGAGAG

mRNA sequence

TGTTTCCGTCTTTTGACTAACTCGCCTACAAAAATTCCCTTGTGGCGATTCAGAAGATTCCATGGTTTTGGCCTTCCTCAATCCTTCCGATTTTCATTAGGGTTTTCGTTTCTCCTTGGCGGCTAGGGTTTTGATTCTTCATTCACTTTGTTGTTTTTCTTTTCAACATCTCATTATAAATATATAACTATAACTCTTTCACTTTCGCCATTGTTATGATTCCTTCTTCCATTGATCTTCATTCCGCTGTTTTTTTTTATTGATATTTCAAACACCCTTTTGTTTATTTATCCAACTCAACGTTAATTTGCCTACTTTTCTTGTTTTCTTGTTTTTTCTTCTTCTTGCCAATTGTTGGTATAAGGGAGGATGATCACGTCGATTGATTGAAATTTCCTTTGGGTTGATTCGTTGTTTGTTGTTGATTCATTGTTCTGATTGATTAAAGAGAACTGGGTTTTGTTTTAGAAGATGAGTTTCAATGATATGAGAGCCTCTGTTATACCGCCGCCTCTGCATTCCTATGGTTCTAATGGCGATGCGTCTGGTTGCTGGTCTCAGTTTCCTAGGAATGATCCATTTGATCCACAATCACAATTTGAAGTACAACAGCCTCCGTATAAAAGAGCTAGAAATTCTGAAGAAAACCCATCTAGTCCTATCTCTTATTCAAATCCCTCCTTAAATTCTAGGGGGCAACCACCAAATGCTCCAGTGAATAAAGGAATAAGTAATATCTTTTTCAAGACGAGGATGTGTGCGAAATTTAAGCTTGGTTTGTGTAGGAATGGTGCTAGTTGTAACTTTGCTCATGGTGTTGAAGATATGAGACAACCTCCACCAAATTGGCAAGAAATTGTTGGTATAAAGGAGGATGATCAATCAGTAAATAATTGGAATGATGATCAGAAGATAATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGAGAGGAGTGCCCCTATGGAGATAGGTGTAATTTTCTTCATGAAGATCCTGCAAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAGAGTTCAGCTATAAGTATTGGAACTACAGGAACTCCATTGATGAATGGAAATGATTCTTCTAGTTATATTGAACCTAGCAGGGTAACTTCTTGTTCTGTTTCTGATGCTCTTCGAGCTAATGGGAATGTTAGGCCTTCATTCTGGAAGACAAAGTTATGCACCAAGTGGGAGATTACAGGCCATTGCCCCTTTGGTGACAAGTGCCATTTTGCTCATGGCCAATCTGAGTTACAACTATATATTGGACGTGAGGGGGAAGTATCTACTGCTGCCCTCAACGTAAAGCCTCTAATTGTAGCCATGGAGGCATCTTCGAGTTTGACAACCAATGTAGTTCCATCCTCTGCCTTACCGGAGGGCCAGGAGAAGCCGAGTTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCTGATTGGCTCGATGATTTGCCTCTATCTCCAAGCTCAACAAGCAAAATGGAGGGTTGAGCCTTTTTTTCTTTTTCAGTTGAAGTTAAGTTTTTGAGTTGGTTTGCTGAGGGATTCAATTGATTAGTTACAATATGGGAGTTGGGTTGGTGGTGGTCTTTCTGAATTAGGGTGTAAAATTTTTTTGGTGAGAATTGATTGGGAATATGGATAGAAGAAGAGAG

Coding sequence (CDS)

ATGAGTTTCAATGATATGAGAGCCTCTGTTATACCGCCGCCTCTGCATTCCTATGGTTCTAATGGCGATGCGTCTGGTTGCTGGTCTCAGTTTCCTAGGAATGATCCATTTGATCCACAATCACAATTTGAAGTACAACAGCCTCCGTATAAAAGAGCTAGAAATTCTGAAGAAAACCCATCTAGTCCTATCTCTTATTCAAATCCCTCCTTAAATTCTAGGGGGCAACCACCAAATGCTCCAGTGAATAAAGGAATAAGTAATATCTTTTTCAAGACGAGGATGTGTGCGAAATTTAAGCTTGGTTTGTGTAGGAATGGTGCTAGTTGTAACTTTGCTCATGGTGTTGAAGATATGAGACAACCTCCACCAAATTGGCAAGAAATTGTTGGTATAAAGGAGGATGATCAATCAGTAAATAATTGGAATGATGATCAGAAGATAATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGAGAGGAGTGCCCCTATGGAGATAGGTGTAATTTTCTTCATGAAGATCCTGCAAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAGAGTTCAGCTATAAGTATTGGAACTACAGGAACTCCATTGATGAATGGAAATGATTCTTCTAGTTATATTGAACCTAGCAGGGTAACTTCTTGTTCTGTTTCTGATGCTCTTCGAGCTAATGGGAATGTTAGGCCTTCATTCTGGAAGACAAAGTTATGCACCAAGTGGGAGATTACAGGCCATTGCCCCTTTGGTGACAAGTGCCATTTTGCTCATGGCCAATCTGAGTTACAACTATATATTGGACGTGAGGGGGAAGTATCTACTGCTGCCCTCAACGTAAAGCCTCTAATTGTAGCCATGGAGGCATCTTCGAGTTTGACAACCAATGTAGTTCCATCCTCTGCCTTACCGGAGGGCCAGGAGAAGCCGAGTTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCTGATTGGCTCGATGATTTGCCTCTATCTCCAAGCTCAACAAGCAAAATGGAGGGTTGA

Protein sequence

MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENPSSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNVVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG*

Homology

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BLAST of Cucsa.131910 vs. Swiss-Prot
Match: C3H39_ARATH (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.2e-82
Identity = 172/340 (50.59%), Postives = 210/340 (61.76%), Query Frame = 1


Query: 40  QSQFEVQ-QPPYKRARNSEENPSSPISY------SNPSLNSRGQPPNAPVNKGISNIFFK 99
           QSQ   Q QP  KR R  ++N  +P S       SNP +     PP  PVNKG +NIF+K
Sbjct: 49  QSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPP--PVNKGTANIFYK 108

Query: 100 TRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQSV------------- 159
           TRMCAKF+ G CRNG  CNFAHG+ED+RQPP NWQEIVG     Q               
Sbjct: 109 TRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERP 168

Query: 160 -------NNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSA 219
                  NNW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RESS 
Sbjct: 169 SLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSV 228

Query: 220 ISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCP 279
           IS+G T       + +S+ IE +R  S  V   +   G V+  +WKT+LC K++ITG CP
Sbjct: 229 ISVGATAAD-QPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCP 288

Query: 280 FGDKCHFAHGQSELQLYIGR-EGEV--STAALNVKPLIVAME--ASSSLTTNVVPSSAL- 339
           FGDKCHFAHGQ+EL   +GR EGE   + A++N + ++ A E  A   +T     SS L 
Sbjct: 289 FGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLN 348

Query: 340 PEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 347
            EG+ K  LLKW   KKINRIY DW+DDLP+   ST  +E
Sbjct: 349 EEGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVE 385

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BLAST of Cucsa.131910 vs. Swiss-Prot
Match: C3H12_ARATH (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-47
Identity = 129/387 (33.33%), Postives = 180/387 (46.51%), Query Frame = 1


Query: 12  PPPLHSYGSNGDAS---------GCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENPSS 71
           PPP + + + GD++           W+  P N   D         PP K+ R S   PSS
Sbjct: 21  PPPDNWFPNLGDSAVWATEDDYNRAWAMNPDNTSGDNNG------PPNKKTRGS---PSS 80

Query: 72  PISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQP 131
             + +  + ++R         K I  +FFKT++C KF+ G C    +CNFAH VE++R+P
Sbjct: 81  SSATTTSAASNR--------TKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRP 140

Query: 132 PPNWQEIVGIKEDDQSVNNWNDDQKIIQ----------------------KMKLCRKFYN 191
           PPNWQEIV   E+++S         +++                      K + C+KFY 
Sbjct: 141 PPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYT 200

Query: 192 GEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSC 251
            E CPYG+ C FLH       D++ R RES AIS+G  G     G  S         +S 
Sbjct: 201 EEGCPYGESCTFLH-------DEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSS 260

Query: 252 SVSDALRANGN--------VRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLY--- 311
           +V       G+        ++PS WKT++C KWEITG+CPFG KCHFAHG +EL  +   
Sbjct: 261 NVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGG 320

Query: 312 ----IGREG-----EVSTAALNVKPLI---------VAMEASSSLTTNVVPSSALPEGQE 336
                G++G     +      N K L          V   A +S  T V    A     +
Sbjct: 321 LVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVTQ 380

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BLAST of Cucsa.131910 vs. Swiss-Prot
Match: C3H56_ORYSJ (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN=Os08g0159800 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.3e-46
Identity = 104/301 (34.55%), Postives = 151/301 (50.17%), Query Frame = 1


Query: 79  NAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQS 138
           N   ++ I  +FFKT++C KF+ G C    +CNFAHG+E++R+PPPNWQEIV   E+   
Sbjct: 76  NTSKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEEATE 135

Query: 139 VNNWNDDQKIIQ-----------------------KMKLCRKFYNGEECPYGDRCNFLHE 198
               +    +                         K + C+KFY  E CPYGD C FLH 
Sbjct: 136 AREEHQIPIMTSSGPTAGGDAGCGGGGGGGSGRAYKGRHCKKFYTDEGCPYGDACTFLH- 195

Query: 199 DPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPS 258
                 D+  + RES AIS+    +P + G         +   + S S A       +PS
Sbjct: 196 ------DEQSKARESVAISL----SPSVGGGGGGGSYNSAAAAAASASAAAGNGPMQKPS 255

Query: 259 FWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGR----EGEVSTAALNVKPLIVAME 318
            WKT++C KWE+TG+CPFG KCHFAHG +EL  Y G     +   + A  + K  +V+ +
Sbjct: 256 NWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRDAAATPDSKQAVVSAK 315

Query: 319 A---SSSLTTNVVPSSAL---------------PEGQEKPSLLKWKGPKKINRIYADWLD 335
           A   +++ +T V+P + +                 GQ +  + KWKGP KI+RIY DW+D
Sbjct: 316 APAETAAASTTVLPHADVYHLGVQAQRSTIAGQRSGQVQRPIQKWKGPDKISRIYGDWID 365

[Close]

BLAST of Cucsa.131910 vs. Swiss-Prot
Match: C3H28_ARATH (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana GN=At2g35430 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20
Identity = 69/216 (31.94%), Postives = 97/216 (44.91%), Query Frame = 1


Query: 151 KMKLCRKFYNGEECPYG-DRCNFLHE---------DPAKFRD---DSGRFRESSAISIGT 210
           K KLC KF  G  CPY    C+F H           P  +++   ++ R RES A+S+G 
Sbjct: 73  KTKLCFKFRAGT-CPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGP 132

Query: 211 TGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCPFGDKC 270
            G                     +V+  L++        WKT++C KW+ TG+CPFG  C
Sbjct: 133 RG---------------------NVAQTLKSPN------WKTRICNKWQTTGYCPFGSHC 192

Query: 271 HFAHGQSELQLYIG------------------REGEVSTAALNVKPLIVAMEASSSLTTN 330
           HFAHG SEL  + G                  + G+V T    V P + +   SS++T  
Sbjct: 193 HFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTSLVSPGVSSQRTSSAVTQK 251

Query: 331 VVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDL 336
                  P G    +  KWKGP KI+R+Y DW+DD+
Sbjct: 253 -------PNGVR--TQRKWKGPDKISRVYGDWIDDI 251

[Close]

BLAST of Cucsa.131910 vs. Swiss-Prot
Match: C3H31_ORYSJ (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.6e-10
Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 1


Query: 151 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSS 210
           K+K C KF++   CP+G+ C+F H  P  ++        +  +++G    P         
Sbjct: 39  KLKPCTKFFSTIGCPFGEGCHFSHFVPGGYQ------AVAKTLNLGNPAVPA-------- 98

Query: 211 YIEPSRVTSCSVSDALRANGNVRP-SFWKTKLCTKWEITGHCPFGDKCHFAHGQSEL 267
              P+R           A GN  P S  KT++CTK+     C FGDKCHFAHG+ EL
Sbjct: 99  ---PARAPMDHA-----AGGNSHPASSGKTRMCTKYNTAEGCKFGDKCHFAHGEREL 133

HSP 2 Score: 43.9 bits (102), Expect = 4.2e-03
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 1


Query: 235 SFWKTKLCTKWEITGHCPFGDKCHFAHGQSE 266
           S +KTKLC  + + G C FGD+CHFAHG++E
Sbjct: 274 SNYKTKLCENF-VKGTCTFGDRCHFAHGENE 303

HSP 3 Score: 38.5 bits (88), Expect = 1.8e-01
Identity = 26/76 (34.21%), Postives = 36/76 (47.37%), Query Frame = 1


Query: 51  KRARNSEENPSSPISYSNPSLNSRGQPPNA-PVNKG----ISNIFFKTRMCAKFKLGLCR 110
           K+A N      + IS S P+    G    A P  +G     SN  +KT++C  F  G C 
Sbjct: 233 KQASNMVGELIATISPSTPAKKPAGSAAGAAPAGRGGPGGRSN--YKTKLCENFVKGTCT 292

Query: 111 NGASCNFAHGVEDMRQ 122
            G  C+FAHG  + R+
Sbjct: 293 FGDRCHFAHGENEQRK 306

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BLAST of Cucsa.131910 vs. TrEMBL
Match: A0A0A0LKX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006070 PE=4 SV=1)

HSP 1 Score: 732.3 bits (1889), Expect = 2.8e-208
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60
           MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP
Sbjct: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV 300
           LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV 300

Query: 301 VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of Cucsa.131910 vs. TrEMBL
Match: A0A067KBJ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13298 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 4.5e-113
Identity = 220/361 (60.94%), Postives = 257/361 (71.19%), Query Frame = 1


Query: 1   MSFNDMRA---SVIPPPLHSYGSNGDASGCWSQFP--RNDPFDPQSQFEVQQPPYKRARN 60
           MS+ND +    S  PP    Y S  DA G W QFP   N+ FDP SQFE  QPPYKR RN
Sbjct: 1   MSYNDSQPPFMSAQPP----YQSGTDAIGIWPQFPLNSNEQFDPHSQFEQHQPPYKRPRN 60

Query: 61  SEENPSSPISYSNPSLNSRGQ-PPNAPVN-KGISNIFFKTRMCAKFKLGLCRNGASCNFA 120
           SE+N S        S+NSR   P N PVN KG +NIFFKTRMCAKF+ G CRNG +CNFA
Sbjct: 61  SEDNNSQ-------SMNSRMPLPNNLPVNNKGTTNIFFKTRMCAKFRSGNCRNGENCNFA 120

Query: 121 HGVEDMRQPPPNWQEIVGIK-----EDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGD 180
           HG++D+RQPPPNWQE+VG+      ED++   NW DDQ+II KMKLC+KFYNGEECPYGD
Sbjct: 121 HGMQDLRQPPPNWQELVGVGGGVRGEDERPSGNWEDDQRIIHKMKLCKKFYNGEECPYGD 180

Query: 181 RCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRA 240
           RCNFLHEDP+KFRDD GRFRESSAISIGTTG P+++G+   +  E S+  +  VSDA R 
Sbjct: 181 RCNFLHEDPSKFRDDIGRFRESSAISIGTTGQPMLHGSGGLNAPEVSKSVNNVVSDAFRV 240

Query: 241 NGNVRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGR-EGEVSTA--ALNVKP 300
           N +++P +WKTKLCTKWE TG CPFG+KCHFAHGQ+ELQL   R EGEV  A   L   P
Sbjct: 241 N-DMKPVYWKTKLCTKWETTGQCPFGEKCHFAHGQAELQLPGERAEGEVGNAGCTLTKPP 300

Query: 301 LIVAMEASSSLTTNVVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKM 347
            I A     S+T NV  SS + EGQ K  LLKWKGPKKINRIY DWLDDLPL  + T+++
Sbjct: 301 PIHANNICPSMTANV--SSVIEEGQGKKCLLKWKGPKKINRIYGDWLDDLPLVQNLTNQV 347

[Close]

BLAST of Cucsa.131910 vs. TrEMBL
Match: B9SEP0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0221060 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 9.4e-111
Identity = 207/355 (58.31%), Postives = 256/355 (72.11%), Query Frame = 1


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRN--DPFDPQSQFEVQQPPYKRARNSEE 60
           MS+++ +   + P   +Y S  DA G W QFP N  + FDPQ  F+  QPP+KR RNSE+
Sbjct: 1   MSYSESQPPFMSPQ-PTYQSGSDAIGIWPQFPMNSNEQFDPQ--FDHHQPPFKRPRNSED 60

Query: 61  NPSSPISYSNPSLNSRGQPPN-APVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVE 120
           N        N S+N R  PPN  P+NKG +NIFFKTRMCAKFK G CRNG +CNFAHG++
Sbjct: 61  N--------NQSMNYRMPPPNNLPINKGTTNIFFKTRMCAKFKTGSCRNGENCNFAHGMQ 120

Query: 121 DMRQPPPNWQEIVGIK---EDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLH 180
           DMRQPPPNWQE+VG+    E+D+   NW+DDQ+II KMKLC+KFYNGE+CPYGDRCNFLH
Sbjct: 121 DMRQPPPNWQELVGVVVRGEEDRPAGNWDDDQRIIHKMKLCKKFYNGEQCPYGDRCNFLH 180

Query: 181 EDPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRP 240
           EDP+KFRDD+GRFRESSAISIGTT  P+M+G+   S +E ++  + + +DA R  GN++P
Sbjct: 181 EDPSKFRDDAGRFRESSAISIGTTAPPMMHGSGGLSVVEVNKPVNNAGADAYR--GNMKP 240

Query: 241 SFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGR-EGEVSTAA--LNVKPLIVAME 300
            +WKTKLCTKWE TG CPFG+KCHFAHGQ+ELQ+  GR EGEV  A   L   P I+   
Sbjct: 241 VYWKTKLCTKWETTGQCPFGEKCHFAHGQAELQIPNGRAEGEVGNAGSILTKPPPILVTN 300

Query: 301 ASSSLTTNVVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 347
            S S+T +V   S + E Q K   LKWKG KKINRIY DWLDDLPL  + T+++E
Sbjct: 301 GSPSMTASV--PSLVEERQGKKCFLKWKGFKKINRIYGDWLDDLPLVHNLTNQVE 340

[Close]

BLAST of Cucsa.131910 vs. TrEMBL
Match: M5W9P8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008076mg PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 8.2e-107
Identity = 195/342 (57.02%), Postives = 247/342 (72.22%), Query Frame = 1


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRN-DPFDPQSQFEVQQPPYKRARNSEEN 60
           M+F+D    +  P    Y    DA  CW  FP + +  D  SQFE Q  P+KR RNSEEN
Sbjct: 1   MNFSDQTQFM--PSQTPYAGGSDAVNCWPPFPMSMNNEDQHSQFEQQPSPFKRPRNSEEN 60

Query: 61  PSSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM 120
            S+P+ Y  P +N+R QP NAPVNKG SNIF+KTR+C  FK G+CRNG +CN+AHG+ED+
Sbjct: 61  QSNPMPY--PPMNARMQPQNAPVNKGASNIFYKTRLCVNFKTGMCRNGENCNYAHGIEDI 120

Query: 121 RQPPPNWQEIVGIKEDDQSV--NNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDP 180
           R PPPNWQE+V ++E+D+     NW+DDQKII +MKLC+KFYNGEECPYGDRCNFLHEDP
Sbjct: 121 RHPPPNWQELVSVREEDRPPLSGNWDDDQKIIHRMKLCKKFYNGEECPYGDRCNFLHEDP 180

Query: 181 AKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFW 240
           AKFRDD  RFRE++AISIGTTG  +++G+  S++ E +R+ S  + D  R   N++P +W
Sbjct: 181 AKFRDDISRFRENTAISIGTTGPSVVHGS-GSNHSEENRLVSTGM-DTFRV--NMKPVYW 240

Query: 241 KTKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGR-EGEV-STAALNVKPLIVAMEASSS 300
           KTKLC KWE TG CPFG+KCHFAHGQ+ELQ+  GR E EV S+  ++ KP    +  SS+
Sbjct: 241 KTKLCNKWETTGKCPFGEKCHFAHGQAELQVPGGRVEAEVLSSTPISTKPQAGPVNDSST 300

Query: 301 LTTNVVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPL 338
               ++P+S    GQ K  +LKWKG KKINRIYADWLDD+PL
Sbjct: 301 TAMAILPASNEEGGQGKKRVLKWKGSKKINRIYADWLDDVPL 334

[Close]

BLAST of Cucsa.131910 vs. TrEMBL
Match: B9HR99_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0009s13310g PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.4e-106
Identity = 202/355 (56.90%), Postives = 247/355 (69.58%), Query Frame = 1


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60
           MS+ D   S + P   SY +  DA G W QF  N+      QFE  QPPYKR RNSE+NP
Sbjct: 1   MSYPDSHDSFMSPQA-SYQAGSDAIGVWPQFVMNNI----EQFEHHQPPYKRPRNSEDNP 60

Query: 61  SSPISYSNPSLNSRGQPPN-APVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM 120
                  N S+NSR  P N  PV+KG +NIFFKTR+CAKFK G CRNG +CNFAHG++D+
Sbjct: 61  -------NQSVNSRTPPTNNLPVHKGATNIFFKTRVCAKFKTGTCRNGENCNFAHGMQDL 120

Query: 121 RQPPPNWQEIVGI----KEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHE 180
           RQPPPNW+E+VG+    +ED  +  NW DDQ+II KMKLC+KFYNGEECPYGDRCNFLHE
Sbjct: 121 RQPPPNWKELVGVSVSSEEDRSTATNWEDDQRIIHKMKLCKKFYNGEECPYGDRCNFLHE 180

Query: 181 DPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPS 240
           DP+KFR+D+GRFRESSAISIGTTG  L +G+   +  E +R  + +VSDA R+N  ++P 
Sbjct: 181 DPSKFREDTGRFRESSAISIGTTGQALGHGSGVFNAAEVNRPANNAVSDASRSN-IIKPV 240

Query: 241 FWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGR----EGEVSTAALNVKPLIVAME 300
           +WKTKLCTKWEITG CPFG+KCHFAHG +ELQ   GR     G   +      P ++   
Sbjct: 241 YWKTKLCTKWEITGQCPFGEKCHFAHGLAELQAPGGRTEVEAGNAGSVLTKAPPPLLPNN 300

Query: 301 ASSSLTTNVVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 347
            S S+T NV   S + E Q K  LLKWKG KKINRIYADWLDDLPL  + T++++
Sbjct: 301 VSPSMTVNV--PSLIEEEQGKKCLLKWKGQKKINRIYADWLDDLPLVHNLTNQVQ 340

[Close]

BLAST of Cucsa.131910 vs. TAIR10
Match: AT3G19360.1 (AT3G19360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 308.1 bits (788), Expect = 6.7e-84
Identity = 172/340 (50.59%), Postives = 210/340 (61.76%), Query Frame = 1


Query: 40  QSQFEVQ-QPPYKRARNSEENPSSPISY------SNPSLNSRGQPPNAPVNKGISNIFFK 99
           QSQ   Q QP  KR R  ++N  +P S       SNP +     PP  PVNKG +NIF+K
Sbjct: 49  QSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPP--PVNKGTANIFYK 108

Query: 100 TRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQSV------------- 159
           TRMCAKF+ G CRNG  CNFAHG+ED+RQPP NWQEIVG     Q               
Sbjct: 109 TRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERP 168

Query: 160 -------NNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSA 219
                  NNW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RESS 
Sbjct: 169 SLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSV 228

Query: 220 ISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCP 279
           IS+G T       + +S+ IE +R  S  V   +   G V+  +WKT+LC K++ITG CP
Sbjct: 229 ISVGATAAD-QPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCP 288

Query: 280 FGDKCHFAHGQSELQLYIGR-EGEV--STAALNVKPLIVAME--ASSSLTTNVVPSSAL- 339
           FGDKCHFAHGQ+EL   +GR EGE   + A++N + ++ A E  A   +T     SS L 
Sbjct: 289 FGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLN 348

Query: 340 PEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 347
            EG+ K  LLKW   KKINRIY DW+DDLP+   ST  +E
Sbjct: 349 EEGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVE 385

[Close]

BLAST of Cucsa.131910 vs. TAIR10
Match: AT1G32360.1 (AT1G32360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 191.8 bits (486), Expect = 7.0e-49
Identity = 129/387 (33.33%), Postives = 180/387 (46.51%), Query Frame = 1


Query: 12  PPPLHSYGSNGDAS---------GCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENPSS 71
           PPP + + + GD++           W+  P N   D         PP K+ R S   PSS
Sbjct: 21  PPPDNWFPNLGDSAVWATEDDYNRAWAMNPDNTSGDNNG------PPNKKTRGS---PSS 80

Query: 72  PISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQP 131
             + +  + ++R         K I  +FFKT++C KF+ G C    +CNFAH VE++R+P
Sbjct: 81  SSATTTSAASNR--------TKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRP 140

Query: 132 PPNWQEIVGIKEDDQSVNNWNDDQKIIQ----------------------KMKLCRKFYN 191
           PPNWQEIV   E+++S         +++                      K + C+KFY 
Sbjct: 141 PPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYT 200

Query: 192 GEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSC 251
            E CPYG+ C FLH       D++ R RES AIS+G  G     G  S         +S 
Sbjct: 201 EEGCPYGESCTFLH-------DEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSS 260

Query: 252 SVSDALRANGN--------VRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLY--- 311
           +V       G+        ++PS WKT++C KWEITG+CPFG KCHFAHG +EL  +   
Sbjct: 261 NVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGG 320

Query: 312 ----IGREG-----EVSTAALNVKPLI---------VAMEASSSLTTNVVPSSALPEGQE 336
                G++G     +      N K L          V   A +S  T V    A     +
Sbjct: 321 LVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVTQ 380

[Close]

BLAST of Cucsa.131910 vs. TAIR10
Match: AT2G35430.1 (AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 101.7 bits (252), Expect = 9.5e-22
Identity = 69/216 (31.94%), Postives = 97/216 (44.91%), Query Frame = 1


Query: 151 KMKLCRKFYNGEECPYG-DRCNFLHE---------DPAKFRD---DSGRFRESSAISIGT 210
           K KLC KF  G  CPY    C+F H           P  +++   ++ R RES A+S+G 
Sbjct: 73  KTKLCFKFRAGT-CPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGP 132

Query: 211 TGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLCTKWEITGHCPFGDKC 270
            G                     +V+  L++        WKT++C KW+ TG+CPFG  C
Sbjct: 133 RG---------------------NVAQTLKSPN------WKTRICNKWQTTGYCPFGSHC 192

Query: 271 HFAHGQSELQLYIG------------------REGEVSTAALNVKPLIVAMEASSSLTTN 330
           HFAHG SEL  + G                  + G+V T    V P + +   SS++T  
Sbjct: 193 HFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTSLVSPGVSSQRTSSAVTQK 251

Query: 331 VVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDL 336
                  P G    +  KWKGP KI+R+Y DW+DD+
Sbjct: 253 -------PNGVR--TQRKWKGPDKISRVYGDWIDDI 251

[Close]

BLAST of Cucsa.131910 vs. TAIR10
Match: AT1G66810.1 (AT1G66810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 52.0 bits (123), Expect = 8.7e-07
Identity = 32/100 (32.00%), Postives = 51/100 (51.00%), Query Frame = 1


Query: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDA-----LRANGN---- 240
           R++  R     +IS+ + G   +N    +S ++ S+++S SVS +     ++  G     
Sbjct: 164 RNNQERNSLPKSISVRSQGYLKINHGFEASDLQTSQLSSNSVSSSQKVCVVQTKGEREAL 223

Query: 241 ----VRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQ 268
                R    KT+LC KW+ TG C +GD C FAHG  EL+
Sbjct: 224 ELEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGIDELR 263

HSP 2 Score: 30.0 bits (66), Expect = 3.5e+00
Identity = 11/26 (42.31%), Postives = 14/26 (53.85%), Query Frame = 1


Query: 149 IQKMKLCRKFYNGEECPYGDRCNFLH 175
           + K +LC K+     C YGD C F H
Sbjct: 232 MMKTELCNKWQETGACCYGDNCQFAH 257

[Close]

BLAST of Cucsa.131910 vs. TAIR10
Match: AT1G68200.1 (AT1G68200.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 50.1 bits (118), Expect = 3.3e-06
Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = 1


Query: 238 KTKLCTKWEITGHCPFGDKCHFAHGQSELQ 268
           KT+LC KW+ TG CP+GD C FAHG  EL+
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELR 253

HSP 2 Score: 35.0 bits (79), Expect = 1.1e-01
Identity = 16/44 (36.36%), Postives = 21/44 (47.73%), Query Frame = 1


Query: 131 GIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLH 175
           G KED +         + + K +LC K+     CPYGD C F H
Sbjct: 204 GKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCPYGDHCQFAH 247

[Close]

BLAST of Cucsa.131910 vs. NCBI nr
Match: gi|449443305|ref|XP_004139420.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis sativus])

HSP 1 Score: 732.3 bits (1889), Expect = 4.1e-208
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60
           MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP
Sbjct: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV 300
           LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV 300

Query: 301 VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of Cucsa.131910 vs. NCBI nr
Match: gi|659071026|ref|XP_008457806.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo])

HSP 1 Score: 719.9 bits (1857), Expect = 2.1e-204
Identity = 340/347 (97.98%), Postives = 343/347 (98.85%), Query Frame = 1


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60
           MSFNDMR SVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPISYSNPSLNSRG PPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNG+DSSSYIEPSR TSCSVSDALRANGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV 300
           LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTT+V
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300

Query: 301 VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           +PSSALPEGQ KPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of Cucsa.131910 vs. NCBI nr
Match: gi|802640297|ref|XP_012078744.1| (PREDICTED: zinc finger CCCH domain-containing protein 39 [Jatropha curcas])

HSP 1 Score: 416.0 bits (1068), Expect = 6.5e-113
Identity = 220/361 (60.94%), Postives = 257/361 (71.19%), Query Frame = 1


Query: 1   MSFNDMRA---SVIPPPLHSYGSNGDASGCWSQFP--RNDPFDPQSQFEVQQPPYKRARN 60
           MS+ND +    S  PP    Y S  DA G W QFP   N+ FDP SQFE  QPPYKR RN
Sbjct: 1   MSYNDSQPPFMSAQPP----YQSGTDAIGIWPQFPLNSNEQFDPHSQFEQHQPPYKRPRN 60

Query: 61  SEENPSSPISYSNPSLNSRGQ-PPNAPVN-KGISNIFFKTRMCAKFKLGLCRNGASCNFA 120
           SE+N S        S+NSR   P N PVN KG +NIFFKTRMCAKF+ G CRNG +CNFA
Sbjct: 61  SEDNNSQ-------SMNSRMPLPNNLPVNNKGTTNIFFKTRMCAKFRSGNCRNGENCNFA 120

Query: 121 HGVEDMRQPPPNWQEIVGIK-----EDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGD 180
           HG++D+RQPPPNWQE+VG+      ED++   NW DDQ+II KMKLC+KFYNGEECPYGD
Sbjct: 121 HGMQDLRQPPPNWQELVGVGGGVRGEDERPSGNWEDDQRIIHKMKLCKKFYNGEECPYGD 180

Query: 181 RCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRA 240
           RCNFLHEDP+KFRDD GRFRESSAISIGTTG P+++G+   +  E S+  +  VSDA R 
Sbjct: 181 RCNFLHEDPSKFRDDIGRFRESSAISIGTTGQPMLHGSGGLNAPEVSKSVNNVVSDAFRV 240

Query: 241 NGNVRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGR-EGEVSTA--ALNVKP 300
           N +++P +WKTKLCTKWE TG CPFG+KCHFAHGQ+ELQL   R EGEV  A   L   P
Sbjct: 241 N-DMKPVYWKTKLCTKWETTGQCPFGEKCHFAHGQAELQLPGERAEGEVGNAGCTLTKPP 300

Query: 301 LIVAMEASSSLTTNVVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKM 347
            I A     S+T NV  SS + EGQ K  LLKWKGPKKINRIY DWLDDLPL  + T+++
Sbjct: 301 PIHANNICPSMTANV--SSVIEEGQGKKCLLKWKGPKKINRIYGDWLDDLPLVQNLTNQV 347

[Close]

BLAST of Cucsa.131910 vs. NCBI nr
Match: gi|255566953|ref|XP_002524459.1| (PREDICTED: zinc finger CCCH domain-containing protein 39 [Ricinus communis])

HSP 1 Score: 408.3 bits (1048), Expect = 1.3e-110
Identity = 207/355 (58.31%), Postives = 256/355 (72.11%), Query Frame = 1


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRN--DPFDPQSQFEVQQPPYKRARNSEE 60
           MS+++ +   + P   +Y S  DA G W QFP N  + FDPQ  F+  QPP+KR RNSE+
Sbjct: 1   MSYSESQPPFMSPQ-PTYQSGSDAIGIWPQFPMNSNEQFDPQ--FDHHQPPFKRPRNSED 60

Query: 61  NPSSPISYSNPSLNSRGQPPN-APVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVE 120
           N        N S+N R  PPN  P+NKG +NIFFKTRMCAKFK G CRNG +CNFAHG++
Sbjct: 61  N--------NQSMNYRMPPPNNLPINKGTTNIFFKTRMCAKFKTGSCRNGENCNFAHGMQ 120

Query: 121 DMRQPPPNWQEIVGIK---EDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLH 180
           DMRQPPPNWQE+VG+    E+D+   NW+DDQ+II KMKLC+KFYNGE+CPYGDRCNFLH
Sbjct: 121 DMRQPPPNWQELVGVVVRGEEDRPAGNWDDDQRIIHKMKLCKKFYNGEQCPYGDRCNFLH 180

Query: 181 EDPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRP 240
           EDP+KFRDD+GRFRESSAISIGTT  P+M+G+   S +E ++  + + +DA R  GN++P
Sbjct: 181 EDPSKFRDDAGRFRESSAISIGTTAPPMMHGSGGLSVVEVNKPVNNAGADAYR--GNMKP 240

Query: 241 SFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGR-EGEVSTAA--LNVKPLIVAME 300
            +WKTKLCTKWE TG CPFG+KCHFAHGQ+ELQ+  GR EGEV  A   L   P I+   
Sbjct: 241 VYWKTKLCTKWETTGQCPFGEKCHFAHGQAELQIPNGRAEGEVGNAGSILTKPPPILVTN 300

Query: 301 ASSSLTTNVVPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 347
            S S+T +V   S + E Q K   LKWKG KKINRIY DWLDDLPL  + T+++E
Sbjct: 301 GSPSMTASV--PSLVEERQGKKCFLKWKGFKKINRIYGDWLDDLPLVHNLTNQVE 340

[Close]

BLAST of Cucsa.131910 vs. NCBI nr
Match: gi|1009110507|ref|XP_015895876.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Ziziphus jujuba])

HSP 1 Score: 400.6 bits (1028), Expect = 2.8e-108
Identity = 201/339 (59.29%), Postives = 250/339 (73.75%), Query Frame = 1


Query: 18  YGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEEN-PSSPISYSNPSLNSRGQ 77
           Y S+ D+  CW QFP N+     SQF+ QQ   K+ R SEE   S+ + ++ P +N+R  
Sbjct: 63  YPSSSDSIACWPQFPINNEDQQHSQFDHQQQ--KKPRISEEGIQSNSLPFTPPPMNTRMI 122

Query: 78  PPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIK--E 137
           PPNAPVNKG SNIFFKTR+CAKFK+G CRNG +CNFAHG+EDMRQPPPNWQE+VG +  +
Sbjct: 123 PPNAPVNKGTSNIFFKTRLCAKFKVGSCRNGENCNFAHGIEDMRQPPPNWQELVGTRFGD 182

Query: 138 DDQSV---NNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESS 197
           +D+S    NNW+DDQKII +MKLC+KFYNGEECPYGDRCNFLHEDP+KFRD+ GRFRES+
Sbjct: 183 EDRSSSGNNNWDDDQKIIHRMKLCKKFYNGEECPYGDRCNFLHEDPSKFRDEMGRFRESA 242

Query: 198 AISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLCTKWEITGHC 257
           AISIGTTG P++NG  S  + E +R              N++P+ WKTK+C KWEITG C
Sbjct: 243 AISIGTTGPPVVNGTTSVIHSEDNRPV------------NIKPASWKTKICNKWEITGQC 302

Query: 258 PFGDKCHFAHGQSELQLYIGR-EGE-VSTAALNVKPLIVAM-EASSSLTTNVVPSSALPE 317
           PFG+KCHFAHGQ+ELQL++ R E E +++ +   KP +VA  + S S+ TNV  +S   E
Sbjct: 303 PFGEKCHFAHGQAELQLHVVRIEAEALNSGSFPTKPQVVAANDLSPSVNTNV--ASFDGE 362

Query: 318 GQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           G+ K  LLKWKGPK INRIYADWLDDLPL  +  SK+EG
Sbjct: 363 GKSKKCLLKWKGPKNINRIYADWLDDLPLGNNLPSKVEG 385

The following BLAST results are available for this feature:

BLAST of Cucsa.131910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
C3H39_ARATH	1.2e-82	50.59	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana GN=At3g193...	[more]
C3H12_ARATH	1.2e-47	33.33	Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g323...	[more]
C3H56_ORYSJ	2.3e-46	34.55	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN...	[more]
C3H28_ARATH	1.7e-20	31.94	Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana GN=At2g354...	[more]
C3H31_ORYSJ	4.6e-10	33.33	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica GN...	[more]

BLAST of Cucsa.131910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKX6_CUCSA	2.8e-208	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006070 PE=4 SV=1	[more]
A0A067KBJ1_JATCU	4.5e-113	60.94	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13298 PE=4 SV=1	[more]
B9SEP0_RICCO	9.4e-111	58.31	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0221060 PE=4 SV=1	[more]
M5W9P8_PRUPE	8.2e-107	57.02	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008076mg PE=4 SV=1	[more]
B9HR99_POPTR	2.4e-106	56.90	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0009s13310g PE=4 SV=1	[more]

BLAST of Cucsa.131910 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19360.1	6.7e-84	50.59	Zinc finger (CCCH-type) family protein	[more]
AT1G32360.1	7.0e-49	33.33	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	9.5e-22	31.94	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G66810.1	8.7e-07	32.00	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.1	3.3e-06	63.33	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

BLAST of Cucsa.131910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443305\|ref\|XP_004139420.1\|	4.1e-208	100.00	PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis sativus]	[more]
gi\|659071026\|ref\|XP_008457806.1\|	2.1e-204	97.98	PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo]	[more]
gi\|802640297\|ref\|XP_012078744.1\|	6.5e-113	60.94	PREDICTED: zinc finger CCCH domain-containing protein 39 [Jatropha curcas]	[more]
gi\|255566953\|ref\|XP_002524459.1\|	1.3e-110	58.31	PREDICTED: zinc finger CCCH domain-containing protein 39 [Ricinus communis]	[more]
gi\|1009110507\|ref\|XP_015895876.1\|	2.8e-108	59.29	PREDICTED: zinc finger CCCH domain-containing protein 39-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000571	Znf_CCCH

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.131910.1	Cucsa.131910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	GENE3D	G3DSA:4.10.1000.10		coord: 232..267 score: 3.9E-18coord: 151..175 score: 6.7E-10coord: 88..123 score: 1.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 237..263 score: 5.3E-11coord: 150..174 score: 1.3E-7coord: 91..115 score: 3.
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 149..176 score: 4.1E-5coord: 90..116 score: 0.0021coord: 236..263 score: 6.
IPR000571	Zinc finger, CCCH-type	PROFILE	PS50103	ZF_C3H1	coord: 236..264 score: 16.089coord: 149..177 score: 15.403coord: 90..117 score: 13
IPR000571	Zinc finger, CCCH-type	unknown	SSF90229	CCCH zinc finger	coord: 89..121 score: 1.83E-7coord: 233..268 score: 8.77E-11coord: 149..176 score: 2.3
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 26..335 score: 6.4E
None	No IPR available	PANTHER	PTHR12547:SF70	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39	coord: 26..335 score: 6.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.131910	Cla016728	Watermelon (97103) v1	cgywmB224
Cucsa.131910	Csa2G006070	Cucumber (Chinese Long) v2	cgycuB184
Cucsa.131910	MELO3C004524	Melon (DHL92) v3.5.1	cgymeB216
Cucsa.131910	ClCG09G002730	Watermelon (Charleston Gray)	cgywcgB215
Cucsa.131910	ClCG11G002860	Watermelon (Charleston Gray)	cgywcgB217
Cucsa.131910	CSPI02G01550	Wild cucumber (PI 183967)	cgycpiB187
Cucsa.131910	CmaCh12G012230	Cucurbita maxima (Rimu)	cgycmaB0364
Cucsa.131910	CmaCh05G013080	Cucurbita maxima (Rimu)	cgycmaB0365
Cucsa.131910	CmoCh05G013250	Cucurbita moschata (Rifu)	cgycmoB0362
Cucsa.131910	CmoCh12G012510	Cucurbita moschata (Rifu)	cgycmoB0359
Cucsa.131910	Lsi11G003000	Bottle gourd (USVL1VR-Ls)	cgylsiB205
Cucsa.131910	Cp4.1LG07g11350	Cucurbita pepo (Zucchini)	cgycpeB0355
Cucsa.131910	Cp4.1LG11g10810	Cucurbita pepo (Zucchini)	cgycpeB0351
Cucsa.131910	MELO3C004524.2	Melon (DHL92) v3.6.1	cgymedB214
Cucsa.131910	CsaV3_2G002700	Cucumber (Chinese Long) v3	cgycucB190
Cucsa.131910	Cla97C11G209340	Watermelon (97103) v2	cgywmbB212
Cucsa.131910	Bhi06G001670	Wax gourd	cgywgoB249
Cucsa.131910	Carg10891	Silver-seed gourd	carcgyB0645
Cucsa.131910	Carg17518	Silver-seed gourd	carcgyB0300

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.131910	Wax gourd	cgywgoB254
Cucsa.131910	Wax gourd	cgywgoB257
Cucsa.131910	Cucurbita maxima (Rimu)	cgycmaB0360
Cucsa.131910	Cucurbita maxima (Rimu)	cgycmaB0362
Cucsa.131910	Cucurbita maxima (Rimu)	cgycmaB0363
Cucsa.131910	Cucurbita moschata (Rifu)	cgycmoB0355
Cucsa.131910	Cucurbita moschata (Rifu)	cgycmoB0357
Cucsa.131910	Cucurbita moschata (Rifu)	cgycmoB0358
Cucsa.131910	Cucurbita moschata (Rifu)	cgycmoB0360
Cucsa.131910	Wild cucumber (PI 183967)	cgycpiB185
Cucsa.131910	Wild cucumber (PI 183967)	cgycpiB190
Cucsa.131910	Cucumber (Chinese Long) v2	cgycuB182
Cucsa.131910	Cucumber (Chinese Long) v2	cgycuB187
Cucsa.131910	Melon (DHL92) v3.5.1	cgymeB211
Cucsa.131910	Melon (DHL92) v3.5.1	cgymeB213
Cucsa.131910	Watermelon (Charleston Gray)	cgywcgB220
Cucsa.131910	Watermelon (97103) v1	cgywmB219
Cucsa.131910	Watermelon (97103) v1	cgywmB225
Cucsa.131910	Cucurbita pepo (Zucchini)	cgycpeB0352
Cucsa.131910	Bottle gourd (USVL1VR-Ls)	cgylsiB206
Cucsa.131910	Bottle gourd (USVL1VR-Ls)	cgylsiB209
Cucsa.131910	Melon (DHL92) v3.6.1	cgymedB208
Cucsa.131910	Melon (DHL92) v3.6.1	cgymedB210
Cucsa.131910	Silver-seed gourd	carcgyB0041
Cucsa.131910	Silver-seed gourd	carcgyB0154
Cucsa.131910	Silver-seed gourd	carcgyB1145
Cucsa.131910	Cucumber (Chinese Long) v3	cgycucB188
Cucsa.131910	Cucumber (Chinese Long) v3	cgycucB195
Cucsa.131910	Watermelon (97103) v2	cgywmbB216
Cucsa.131910	Watermelon (97103) v2	cgywmbB219