Cucsa.128550 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.128550
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Cyclase/dehydrase, putative, expressed
Location	scaffold01024 : 528644 .. 532000 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTTTCCATGTCCCTTTGCAATTTTCTTCTTCACTAATCCCAAAACCCCACTATGTCAATTGCACCACTCACTTCCAATTCCTCTCCGAACTCTCTTATTCTCATTCATCGATCAATCAGAAGAAGAAATGGCATCTTATTCATGGCGATTCCCACTTCCAGAAGCATCAATTCCAGGTCTTTTTCTCTACCCGACCTCGTCTTCAAGATCCCACGTACTTCTTCCAAGCGCAGCAGAAACCCACTCAAATTCGTCTCCCCTGTAATGGAATGGCAGAATTGCACGTAATTACACCATGTCTTTCTCGATTCTCTGTTTCATTACCGTTTATTGATTCTCTATTTGCTATGGGTTTTTTTtGGATTTCAGTTTCGTTGTTTTTTTtCTTTCTAAAAATTCCCAATTCTTGTCTTGATTGGTTTGGTGGTTGTGCAGTTGTTCCAGGAGGATGGATTCTGAGTTTCTTTGAATGTTATAGGTTTGTTGGTATAATTAGGAAAATGTGATGAATGCAGGGCTAAGATGGAAGTTGATATACCTGCTTCGGTTGCCTATAAATGCTATTCAGATCGTGAAGCTATACCCAAATGGATGCCATTCATTTCATCTGTGAAGGTGAGTTATATATATCACACATTCTCAAGTAGGTTGCTAGCTGATACCCTTTATTACTGCTTGACTTAGAAAACGTTTTCCATGCTCAGTTCAAGATGCAATCTACCAATATGGTAAAGGGGGAAAACCTCCAATTAGGAGAAATGTTTGTCGAGCCTAGGGAGTAGGTTTGTTATGCTAGTCTCTTATTTGAGTGGATGCTTGTGAGGAGCAGGTTTATGTTTATAAGAGAAGTGATGGAAGAAGGAAATGTGAGGACTATGGGTGGAAATAACTGATACTTTGGAAGAGAATCGGTCCTCTGAAAAGTCTAGTAACTTGCAATCTTCTTCCTCAATCAATTGTAATAGCTACTTTTAGTAAGGGTTCTTTAATGATTCTGCAAGATAATGTATGAATGAAAGCATATAGTGTGAAATGGAAGTGATGACCGATTAAAGTCACTTTGGTGGATGGTTGTTCTTGGTTAAAGTTAATAATGAGTCATCCTCCAATGCCTGCTTTTGTATCCTAAGTAAACTCGTTATGTAGGCCTAAGAAGCACAAATTCGAATGTGTGACATGGATATCATATGACATTTATGTTATTGTGATATGTCATTTTTTAAAAGCCTAAGATATAGGAATGTTAAAGACATGTTTACTAAAAAaGACAGATTTTAACATATATCTTTTTATGTATTTGTATGTTAAAGGAACGAGTGATGTATTTTGCTCTCAAAGTTTGTTACTTCTTTGGCTCATTTTACTATGTCTGCTTGTTTTCTATATTTACAACTGTTGAATGACTAACAAATGTTGTATCCGTATTCAATTTGTACTCCATACTAAGTTTATATAGTACGTACGCTACGAGTGTCTGAATGTCCAGCTGGTTTTTACTGTAAACATATTATCCAAACTGAAGTGCTAAGTGTTTGAGCTGCCTAATCGTTGGCTATTAATTTTATTTGGTAGGAGAATCGTGATGCCCAAATTCTATGAATCTCAATTCACAATACCATGTTAGACAGTTTACCAACAACATTTTGGTTATGGAGTAGAGCTTTTGCATTTATTAGAAAATTTTGTGGTATTGTATGTAACTACTTGTTCTTTATAGGTATTGGAAGATAATCCTACGTTATCACGGTGGTCACTAAAATATAATGCTTTTGGTCAAGATATCGAGTTCTCTTGGCTTGCTCGAAACTTGCAGGCAAACAATTCCATACCTTGATCCTTCTATTTAACATCCATCTTTGCCATGCAATGCTATTCTAATTCTTTCTGTTCCTAAATTGTTATCTGATGATGTTTTGCAGCCGACCCCAAATCAAAAAaTCCATTGGCGGTCTCTTGAAGGTCTCCCAAACAGGTACCTTCCCAATTTAGTTCAAAAGCCTTCTTCATATCTCACGAATCGACTGAATTCATGGGTGGACCTATTAGTCTCAATAACTAATTAAGAGGCCATAAGTTTAATCTATGACAGTTTACCTAGGAATTGATTTTCTATGAGTTTTCTTGACACTCAAATGTTGTAAGGTCGAGTGGATTGTCCCATAAGATTAGTCGATGTGCGTATAAGCTGGTCCAGACACTCACCGATATAAAAAAGAAAaTAAAaGAAAaTATCGTGAATTGATTACATGACTAAGTTCTATTGGATCTGCATGTTGTATTTTCTACTTCGGAGCTTTTGATGGTTAACAATCTTTGTTGTATTTGCAGAGGTGTTGTACGATTTTATCCAAAGGGCCCTTCTTCTTGCCTTGTAGAAGTAAGTCTACAACATTCCCATATTAACATGTTTATACCTTTTTGTTTGGAACCAAAATAGTGTGGGATGCCTTTGTCTCCACACATTGATTAGAATAGTTAGCCCTGTCTCCAAAATAGTGTGGATGTACAATTAGGTACTTAAGTGCCTTGACTCTCCCACTTCAATAGTTAGCTTTTGGGGTCTGATTCTCCATGGTGCTTAAGTACCTAAATGGTTTTAGAGTTGGTTATCGATGTTTCGGAATAGAACCGACGGAGGGTTCCAGCTTCTTGGTAGTATGGGATGCCTGCCTTTGTCTCACACTGATTAGCTTTTAAGGTGTGGTTTTTCAAGGTGCTTAAGTATCTAACACTTTTTCTTTTAAGTAAATTTCAGAAGACATCCTGACAGTCTAATACACCGCATTTTAAGACATAAGTGAAGCAACTTTTTCATAAAATCAATATAAAAGCTTGTGTGTGGGGGCAATCTGTCCACAAGCTAAAAGAGAGTATTATTTGTTTTATGTACACTATTTCTTTCATAACGAGCGATTTGACGGAAAAGTTTGTTATTGCTCCAAAAGGGAAATTATGGTAAAAAAGATTGGAACATACATGATTTTAGAAGGAAATTAATATTCGGAAAATTCAACATATATGGATGCATTCTCATTGTCACTCGATTACATTCCTATTATAGTTTTCAAACATCTCTGTATTTCCCAATTTGGTTGTTTTCAGTTGACCGTCTCCTATGAAGTCCCTCCACTTTTGTCTCCAGTGGCTTCTGTAAGCAATTCCAGCCTTCAATTCAATTCCATTATTAGTTCGAAATCAATCATGGAAAGCATAATTCTCTAAAAGTCATGGTGCGTTCTTAGTAATTTGTATGATGTTTATAAATGCAGGCACTGCAACCTTTGCTTGAGAGATTACTTCAACGAGGTCTCAAAAGCTTTGCTACGTTTGCTAAGAAATACCAAACGGCGTGA

mRNA sequence

CTCTCTTTCCATGTCCCTTTGCAATTTTCTTCTTCACTAATCCCAAAACCCCACTATGTCAATTGCACCACTCACTTCCAATTCCTCTCCGAACTCTCTTATTCTCATTCATCGATCAATCAGAAGAAGAAATGGCATCTTATTCATGGCGATTCCCACTTCCAGAAGCATCAATTCCAGGTCTTTTTCTCTACCCGACCTCGTCTTCAAGATCCCACGTACTTCTTCCAAGCGCAGCAGAAACCCACTCAAATTCGTCTCCCCTGTAATGGAATGGCAGAATTGCACGGCTAAGATGGAAGTTGATATACCTGCTTCGGTTGCCTATAAATGCTATTCAGATCGTGAAGCTATACCCAAATGGATGCCATTCATTTCATCTGTGAAGGTATTGGAAGATAATCCTACGTTATCACGGTGGTCACTAAAATATAATGCTTTTGGTCAAGATATCGAGTTCTCTTGGCTTGCTCGAAACTTGCAGCCGACCCCAAATCAAAAAATCCATTGGCGGTCTCTTGAAGGTCTCCCAAACAGAGGTGTTGTACGATTTTATCCAAAGGGCCCTTCTTCTTGCCTTGTAGAATTGACCGTCTCCTATGAAGTCCCTCCACTTTTGTCTCCAGTGGCTTCTGCACTGCAACCTTTGCTTGAGAGATTACTTCAACGAGGTCTCAAAAGCTTTGCTACGTTTGCTAAGAAATACCAAACGGCGTGA

Coding sequence (CDS)

ATGTCAATTGCACCACTCACTTCCAATTCCTCTCCGAACTCTCTTATTCTCATTCATCGATCAATCAGAAGAAGAAATGGCATCTTATTCATGGCGATTCCCACTTCCAGAAGCATCAATTCCAGGTCTTTTTCTCTACCCGACCTCGTCTTCAAGATCCCACGTACTTCTTCCAAGCGCAGCAGAAACCCACTCAAATTCGTCTCCCCTGTAATGGAATGGCAGAATTGCACGGCTAAGATGGAAGTTGATATACCTGCTTCGGTTGCCTATAAATGCTATTCAGATCGTGAAGCTATACCCAAATGGATGCCATTCATTTCATCTGTGAAGGTATTGGAAGATAATCCTACGTTATCACGGTGGTCACTAAAATATAATGCTTTTGGTCAAGATATCGAGTTCTCTTGGCTTGCTCGAAACTTGCAGCCGACCCCAAATCAAAAAaTCCATTGGCGGTCTCTTGAAGGTCTCCCAAACAGAGGTGTTGTACGATTTTATCCAAAGGGCCCTTCTTCTTGCCTTGTAGAATTGACCGTCTCCTATGAAGTCCCTCCACTTTTGTCTCCAGTGGCTTCTGCACTGCAACCTTTGCTTGAGAGATTACTTCAACGAGGTCTCAAAAGCTTTGCTACGTTTGCTAAGAAATACCAAACGGCGTGA

Protein sequence

MSIAPLTSNSSPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKRSRNPLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA*

Homology

[Close]

BLAST of Cucsa.128550 vs. TrEMBL
Match: A0A0A0K6F1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G414450 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 2.2e-121
Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 1


Query: 1   MSIAPLTSNSSPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60
           MSIAPLTSNSSPNSLILIHRSIRRRNGI+FMAIPTSRSINSRSFSLPDLVFKIPRTSSKR
Sbjct: 1   MSIAPLTSNSSPNSLILIHRSIRRRNGIIFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60

Query: 61  SRNPLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLS 120
           SRNPLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLS
Sbjct: 61  SRNPLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLS 120

Query: 121 RWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTV 180
           RWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTV
Sbjct: 121 RWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTV 180

Query: 181 SYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA 221
           SYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA
Sbjct: 181 SYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA 220

[Close]

BLAST of Cucsa.128550 vs. TrEMBL
Match: A0A061DSJ3_THECC (Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Theobroma cacao GN=TCM_004900 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.1e-75
Identity = 147/217 (67.74%), Postives = 167/217 (76.96%), Query Frame = 1


Query: 1   MSIAPLTSNSSPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60
           MS A ++  SSPNS  L H S   R  IL  A P+ R  + +  SL  +  +IP  S K+
Sbjct: 1   MSSAAISFISSPNSPRLSHVSPTNRYAILLTATPSCRISSLKPPSLSSIFIRIPYGSFKK 60

Query: 61  SR--NPLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPT 120
           S      +  SPVMEWQ+CT K E+D+PAS+AYKCYSDREAIP WMPFISSVK+LED P 
Sbjct: 61  SSFFTSSRTFSPVMEWQDCTVKTEIDVPASMAYKCYSDREAIPNWMPFISSVKILEDKPN 120

Query: 121 LSRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVEL 180
           LSRWSLKYNAFG+DIE+SWLARN+QP PNQKIHWRSLEGLPNRGVVRFYPKGPSSC+VEL
Sbjct: 121 LSRWSLKYNAFGRDIEYSWLARNMQPIPNQKIHWRSLEGLPNRGVVRFYPKGPSSCVVEL 180

Query: 181 TVSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAK 216
           TVSYEVP LL+PVASALQP LE LL+RGL  F  FAK
Sbjct: 181 TVSYEVPQLLAPVASALQPFLENLLKRGLDRFENFAK 217

[Close]

BLAST of Cucsa.128550 vs. TrEMBL
Match: M5XBC2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011210mg PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.9e-73
Identity = 143/218 (65.60%), Postives = 165/218 (75.69%), Query Frame = 1


Query: 4   APLTSNSSPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKRSRN 63
           AP    SSPN            + +  + I  S S+     S  D+ FKIP  S KRS +
Sbjct: 8   APAACISSPNC----------PSSLSHIPIWRSSSLRPPPPSFSDISFKIPCGSFKRSSS 67

Query: 64  PLKF--VSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSR 123
              F  +SPVM+WQ+CT KME+D+P SVAY CYSDREAIP+WMPFIS+VK+LED P LSR
Sbjct: 68  LTGFRTLSPVMQWQDCTVKMEIDVPISVAYDCYSDREAIPRWMPFISTVKILEDKPDLSR 127

Query: 124 WSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVS 183
           WSLKY AFG+DIEFSWLARN+QP PNQKIHWRSLEGLPNRG VRFYPKGPSSCLVELTVS
Sbjct: 128 WSLKYKAFGRDIEFSWLARNMQPIPNQKIHWRSLEGLPNRGAVRFYPKGPSSCLVELTVS 187

Query: 184 YEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQT 220
           YEVPP+L+PVASALQP LE LL RGL+ FATF+K Y++
Sbjct: 188 YEVPPILAPVASALQPFLESLLGRGLERFATFSKSYKS 215

[Close]

BLAST of Cucsa.128550 vs. TrEMBL
Match: A0A0B0NN66_GOSAR (Uncharacterized protein 17.2 kDa protein in melC2-rnhH intergenic region OS=Gossypium arboreum GN=F383_22398 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.9e-73
Identity = 143/207 (69.08%), Postives = 162/207 (78.26%), Query Frame = 1


Query: 11  SPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKRSR--NPLKFV 70
           S +SL L H      N ILF AI + R  + +S SL  +  +IP  S K++      +  
Sbjct: 8   SSSSLRLTHVFPTNGNAILFNAISSCRISSLKSPSLNSIFIRIPYGSFKKASFFTSSRPF 67

Query: 71  SPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSRWSLKYNA 130
           SPVMEWQ+CTAKME+D+PASVAYKCYSDREAIP WMPFISSV+VLED P LSRWSLKY A
Sbjct: 68  SPVMEWQDCTAKMEIDVPASVAYKCYSDREAIPNWMPFISSVQVLEDKPDLSRWSLKYKA 127

Query: 131 FGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLL 190
           FG+DIE+SWLARN+QP PNQKIHWRSLEGLPNRG VRFYPKGPSSCL+ELTVSYEVP LL
Sbjct: 128 FGRDIEYSWLARNMQPIPNQKIHWRSLEGLPNRGAVRFYPKGPSSCLIELTVSYEVPQLL 187

Query: 191 SPVASALQPLLERLLQRGLKSFATFAK 216
           +PVASALQP LE LL+ GL  FA FAK
Sbjct: 188 APVASALQPFLESLLKSGLDRFAKFAK 214

[Close]

BLAST of Cucsa.128550 vs. TrEMBL
Match: B7FHB4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 8.4e-73
Identity = 147/219 (67.12%), Postives = 165/219 (75.34%), Query Frame = 1


Query: 3   IAPLTSNSSPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTS-SKRS 62
           I P ++ SS N          R     F A  TSRS  S S S     F++P TS SKRS
Sbjct: 13  IGPFSTTSSSN----------RNARTTFAANFTSRSFPSTSLSSNRFFFRLPHTSFSKRS 72

Query: 63  RNPLKF--VSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTL 122
               +F   SPVMEWQ+CT KMEVD+P SVAY CYSDREAIP+WMPFIS+VK+L   P L
Sbjct: 73  PTFRRFKRFSPVMEWQDCTVKMEVDVPISVAYACYSDREAIPEWMPFISTVKILPAKPDL 132

Query: 123 SRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELT 182
           S+WSLKY AFGQ+IEFSWLARN+QPTPNQKIHWRSL+GLPNRG VRFYPKGPSSCLVELT
Sbjct: 133 SQWSLKYKAFGQNIEFSWLARNMQPTPNQKIHWRSLDGLPNRGAVRFYPKGPSSCLVELT 192

Query: 183 VSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQ 219
           VSYEVP LL+PVASALQP LE LL+RGL+ FATFAK Y+
Sbjct: 193 VSYEVPQLLAPVASALQPFLEGLLKRGLERFATFAKSYK 221

[Close]

BLAST of Cucsa.128550 vs. TAIR10
Match: AT1G02475.1 (AT1G02475.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 242.3 bits (617), Expect = 2.9e-64
Identity = 130/212 (61.32%), Postives = 152/212 (71.70%), Query Frame = 1


Query: 4   APLTSNSSPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKRSRN 63
           +P+  +  P S  LI    +  NG  F +  +S S  SR        F IP    KR R 
Sbjct: 25  SPICFDRKPFSYSLIPLFPKTLNG--FSSYSSSVSRRSR--------FIIP----KRRR- 84

Query: 64  PLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSRWS 123
                S  MEWQ+C+ KMEVD+P SVAY  Y DRE+ PKWMPFISSV+VL+D P LSRWS
Sbjct: 85  ----FSVSMEWQDCSVKMEVDVPVSVAYNFYLDRESFPKWMPFISSVQVLKDKPDLSRWS 144

Query: 124 LKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYE 183
           LKYNAFGQDI++SWLARNLQPTPNQKIHWRSLEGLPN+G VRF+PKGPSSC+VELTVSYE
Sbjct: 145 LKYNAFGQDIKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKGPSSCIVELTVSYE 204

Query: 184 VPPLLSPVASALQPLLERLLQRGLKSFATFAK 216
           VP LL+PVAS L+P +E LL+ GL+ FA  AK
Sbjct: 205 VPALLTPVASVLRPFIESLLRGGLERFAALAK 217

[Close]

BLAST of Cucsa.128550 vs. TAIR10
Match: AT4G01883.1 (AT4G01883.1 Polyketide cyclase / dehydrase and lipid transport protein)

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-57
Identity = 118/226 (52.21%), Postives = 151/226 (66.81%), Query Frame = 1


Query: 1   MSIAPLTSNSSPNSLI--LIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKI---PR 60
           MS   + S ++P  L+    +R+   R+     A P+SR   S S  +  L       P 
Sbjct: 1   MSATAILSVNNPKDLVTGFGNRTFHSRSNF---AKPSSRLFPSSSSPMKPLTLASRFSPL 60

Query: 61  TSSKRSRNPLKF--VSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVL 120
            S+ RS     F     +MEWQ C  KM+V++P SVAY  YS+RE+IPKWM FISSVKVL
Sbjct: 61  ISTNRSFKSSVFRRFDTLMEWQECKVKMKVEVPVSVAYGLYSERESIPKWMTFISSVKVL 120

Query: 121 EDNPTLSRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSS 180
           +D P LSRW+LKY AFGQ++E++WLA+NLQP PNQKIHW SLEGLPN+G VRF+P GPSS
Sbjct: 121 KDKPDLSRWTLKYKAFGQNLEYAWLAKNLQPLPNQKIHWISLEGLPNKGTVRFFPLGPSS 180

Query: 181 CLVELTVSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQT 220
           C VELT +YEVP LL P A+ALQPL++ L++  L+ FA  AK  +T
Sbjct: 181 CDVELTFAYEVPLLLIPFAAALQPLMQGLIKNSLEQFAEIAKSTKT 223

[Close]

BLAST of Cucsa.128550 vs. TAIR10
Match: AT1G02470.2 (AT1G02470.2 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-49
Identity = 91/156 (58.33%), Postives = 122/156 (78.21%), Query Frame = 1


Query: 61  SRNPLKFVSPVMEWQNCT-AKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTL 120
           S +P  F  PVM+WQ+ T  KM VD PASVAYK Y+DRE  PKWMPF+SSV+ +E +P L
Sbjct: 65  SSSPKPF-RPVMQWQDVTRVKMVVDAPASVAYKLYADREMFPKWMPFLSSVEAMEGSPDL 124

Query: 121 SRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELT 180
           SR+ +K  +FGQ+IE+ +LA+NLQP P++KIHWRS+EG  NRG VRF+P+GPSSCLVE++
Sbjct: 125 SRYLVKLESFGQNIEYHFLAKNLQPIPDRKIHWRSIEGFENRGSVRFFPRGPSSCLVEIS 184

Query: 181 VSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAK 216
            SYEVP   +PVA A++P +E++++ GL+ FA F K
Sbjct: 185 FSYEVPNAFAPVAFAMKPFMEKIIRGGLERFAAFVK 219

[Close]

BLAST of Cucsa.128550 vs. NCBI nr
Match: gi|449436387|ref|XP_004135974.1| (PREDICTED: uncharacterized protein LOC101216857 isoform X1 [Cucumis sativus])

HSP 1 Score: 443.0 bits (1138), Expect = 3.1e-121
Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 1


Query: 1   MSIAPLTSNSSPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60
           MSIAPLTSNSSPNSLILIHRSIRRRNGI+FMAIPTSRSINSRSFSLPDLVFKIPRTSSKR
Sbjct: 1   MSIAPLTSNSSPNSLILIHRSIRRRNGIIFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60

Query: 61  SRNPLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLS 120
           SRNPLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLS
Sbjct: 61  SRNPLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLS 120

Query: 121 RWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTV 180
           RWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTV
Sbjct: 121 RWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTV 180

Query: 181 SYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA 221
           SYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA
Sbjct: 181 SYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA 220

[Close]

BLAST of Cucsa.128550 vs. NCBI nr
Match: gi|659122926|ref|XP_008461396.1| (PREDICTED: uncharacterized protein LOC103499992 isoform X1 [Cucumis melo])

HSP 1 Score: 435.3 bits (1118), Expect = 6.5e-119
Identity = 218/224 (97.32%), Postives = 220/224 (98.21%), Query Frame = 1


Query: 1   MSIAPLTSNSSPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60
           MSIAPLTSNS+PNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR
Sbjct: 1   MSIAPLTSNSTPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60

Query: 61  SRNP----LKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDN 120
           SRNP    LKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDN
Sbjct: 61  SRNPICPRLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDN 120

Query: 121 PTLSRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLV 180
           P+LSRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLV
Sbjct: 121 PSLSRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLV 180

Query: 181 ELTVSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA 221
           ELTVSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA
Sbjct: 181 ELTVSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA 224

[Close]

BLAST of Cucsa.128550 vs. NCBI nr
Match: gi|590720071|ref|XP_007051230.1| (Polyketide cyclase/dehydrase and lipid transport superfamily protein [Theobroma cacao])

HSP 1 Score: 291.2 bits (744), Expect = 1.5e-75
Identity = 147/217 (67.74%), Postives = 167/217 (76.96%), Query Frame = 1


Query: 1   MSIAPLTSNSSPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60
           MS A ++  SSPNS  L H S   R  IL  A P+ R  + +  SL  +  +IP  S K+
Sbjct: 1   MSSAAISFISSPNSPRLSHVSPTNRYAILLTATPSCRISSLKPPSLSSIFIRIPYGSFKK 60

Query: 61  SR--NPLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPT 120
           S      +  SPVMEWQ+CT K E+D+PAS+AYKCYSDREAIP WMPFISSVK+LED P 
Sbjct: 61  SSFFTSSRTFSPVMEWQDCTVKTEIDVPASMAYKCYSDREAIPNWMPFISSVKILEDKPN 120

Query: 121 LSRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVEL 180
           LSRWSLKYNAFG+DIE+SWLARN+QP PNQKIHWRSLEGLPNRGVVRFYPKGPSSC+VEL
Sbjct: 121 LSRWSLKYNAFGRDIEYSWLARNMQPIPNQKIHWRSLEGLPNRGVVRFYPKGPSSCVVEL 180

Query: 181 TVSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAK 216
           TVSYEVP LL+PVASALQP LE LL+RGL  F  FAK
Sbjct: 181 TVSYEVPQLLAPVASALQPFLENLLKRGLDRFENFAK 217

[Close]

BLAST of Cucsa.128550 vs. NCBI nr
Match: gi|778728346|ref|XP_011659410.1| (PREDICTED: uncharacterized protein LOC101216857 isoform X2 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 9.9e-75
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1


Query: 81  MEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSRWSLKYNAFGQDIEFSWLAR 140
           MEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSRWSLKYNAFGQDIEFSWLAR
Sbjct: 1   MEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSRWSLKYNAFGQDIEFSWLAR 60

Query: 141 NLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLLSPVASALQPLLE 200
           NLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLLSPVASALQPLLE
Sbjct: 61  NLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLLSPVASALQPLLE 120

Query: 201 RLLQRGLKSFATFAKKYQTA 221
           RLLQRGLKSFATFAKKYQTA
Sbjct: 121 RLLQRGLKSFATFAKKYQTA 140

[Close]

BLAST of Cucsa.128550 vs. NCBI nr
Match: gi|659122928|ref|XP_008461397.1| (PREDICTED: uncharacterized protein LOC103499992 isoform X2 [Cucumis melo])

HSP 1 Score: 287.0 bits (733), Expect = 2.9e-74
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 1


Query: 81  MEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSRWSLKYNAFGQDIEFSWLAR 140
           MEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNP+LSRWSLKYNAFGQDIEFSWLAR
Sbjct: 1   MEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPSLSRWSLKYNAFGQDIEFSWLAR 60

Query: 141 NLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLLSPVASALQPLLE 200
           NLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLLSPVASALQPLLE
Sbjct: 61  NLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLLSPVASALQPLLE 120

Query: 201 RLLQRGLKSFATFAKKYQTA 221
           RLLQRGLKSFATFAKKYQTA
Sbjct: 121 RLLQRGLKSFATFAKKYQTA 140

The following BLAST results are available for this feature:

BLAST of Cucsa.128550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6F1_CUCSA	2.2e-121	99.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G414450 PE=4 SV=1	[more]
A0A061DSJ3_THECC	1.1e-75	67.74	Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Theobrom...	[more]
M5XBC2_PRUPE	2.9e-73	65.60	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011210mg PE=4 SV=1	[more]
A0A0B0NN66_GOSAR	4.9e-73	69.08	Uncharacterized protein 17.2 kDa protein in melC2-rnhH intergenic region OS=Goss...	[more]
B7FHB4_MEDTR	8.4e-73	67.12	Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]

BLAST of Cucsa.128550 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02475.1	2.9e-64	61.32	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT4G01883.1	1.2e-57	52.21	Polyketide cyclase / dehydrase and lipid transport protein	[more]
AT1G02470.2	1.2e-49	58.33	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]

BLAST of Cucsa.128550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436387\|ref\|XP_004135974.1\|	3.1e-121	99.55	PREDICTED: uncharacterized protein LOC101216857 isoform X1 [Cucumis sativus]	[more]
gi\|659122926\|ref\|XP_008461396.1\|	6.5e-119	97.32	PREDICTED: uncharacterized protein LOC103499992 isoform X1 [Cucumis melo]	[more]
gi\|590720071\|ref\|XP_007051230.1\|	1.5e-75	67.74	Polyketide cyclase/dehydrase and lipid transport superfamily protein [Theobroma ...	[more]
gi\|778728346\|ref\|XP_011659410.1\|	9.9e-75	100.00	PREDICTED: uncharacterized protein LOC101216857 isoform X2 [Cucumis sativus]	[more]
gi\|659122928\|ref\|XP_008461397.1\|	2.9e-74	99.29	PREDICTED: uncharacterized protein LOC103499992 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005031	COQ10_START
IPR023393	START-like_dom_sf
IPR005031	COQ10_START
IPR023393	START-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.128550.1	Cucsa.128550.1	mRNA
Cucsa.128550.2	Cucsa.128550.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005031	Coenzyme Q-binding protein COQ10, START domain	PFAM	PF03364	Polyketide_cyc	coord: 3..130 score: 3.2
IPR023393	START-like domain	GENE3D	G3DSA:3.30.530.20		coord: 3..136 score: 8.
None	No IPR available	PANTHER	PTHR33824	FAMILY NOT NAMED	coord: 1..138 score: 1.4
None	No IPR available	PANTHER	PTHR33824:SF3	POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED	coord: 1..138 score: 1.4
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 2..137 score: 2.57

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.128550	Cla015172	Watermelon (97103) v1	cgywmB212
Cucsa.128550	Csa7G414450	Cucumber (Chinese Long) v2	cgycuB177
Cucsa.128550	MELO3C023625	Melon (DHL92) v3.5.1	cgymeB205
Cucsa.128550	ClCG09G004770	Watermelon (Charleston Gray)	cgywcgB208
Cucsa.128550	CSPI07G18470	Wild cucumber (PI 183967)	cgycpiB180
Cucsa.128550	CmoCh08G004840	Cucurbita moschata (Rifu)	cgycmoB0342
Cucsa.128550	Lsi02G025070	Bottle gourd (USVL1VR-Ls)	cgylsiB199
Cucsa.128550	Cp4.1LG17g07670	Cucurbita pepo (Zucchini)	cgycpeB0335
Cucsa.128550	MELO3C023625.2	Melon (DHL92) v3.6.1	cgymedB202
Cucsa.128550	CsaV3_7G030310	Cucumber (Chinese Long) v3	cgycucB181
Cucsa.128550	Cla97C09G167180	Watermelon (97103) v2	cgywmbB206
Cucsa.128550	Bhi09G000639	Wax gourd	cgywgoB238
Cucsa.128550	Carg13404	Silver-seed gourd	carcgyB0521

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.128550	Cucurbita maxima (Rimu)	cgycmaB0346
Cucsa.128550	Cucurbita maxima (Rimu)	cgycmaB0347
Cucsa.128550	Cucurbita maxima (Rimu)	cgycmaB0348
Cucsa.128550	Cucurbita moschata (Rifu)	cgycmoB0340
Cucsa.128550	Cucurbita moschata (Rifu)	cgycmoB0341
Cucsa.128550	Cucurbita pepo (Zucchini)	cgycpeB0334
Cucsa.128550	Silver-seed gourd	carcgyB0131
Cucsa.128550	Silver-seed gourd	carcgyB0857