CmoCh08G004840 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G004840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Polyketide cyclase/dehydrase and lipid transport superfamily protein
Location	Cmo_Chr08 : 2987153 .. 2990633 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGTTCGTCTGCCTCTCTGACGGCCTTGATATTGTTGTGGCTCTGAAAAGACGGAGAGATTTTCAGAGGCTGTTCTTGCATTTGGTGCCCTCAACTCTCTGCTCACCACTCCCTTTGTGTCCAGTCGCTCTCTTCTTCTTCACGAATTTTAAATCCCAGTATGTCACTTGCAGCGCTCACCTGTAATTCGAATCCAAACACTCTGAATCTCAGTCATCGATCGATAAGAAGGAGTAATGGCGTCTTATTCATGGCGATTCCCACTCGCAGAAGCATCAATTCGAGGTCACTATCTCTTCCCAAGCTCCTCTTCAGAATCCCACGGAGTTCTTCGAAGTGCCGCAGAAACCCCATTTCCCCTCGAGTTAAATTCGTCTCCCCTGTGATGGAATGGCAGAATTGCACGTAAATACAGTATTTCTTTCTCGATTCTCCGTGTTGTTTCGGTTTATTGATTCTCTATTTGCAATTGCTTGTTTAGATTTCGATTTCCCTTTCACTTCAAAAAGTTCCTAATTCTTCGCTGGATTGGTTTGGCTATTGCATATTGTTTTGATGATTTGATGTTGATTGCGATGAAGTCCTTCCTGAATGATGGACTCTGAGTTTCTTAGAATGTTGTAGGTTTGTTGGTATAACCAGGAAATGTGATGAATGCAGGGCCAAGATGGAAGTAGACATTCCTGCCTCGGTTGCTTATAAATGCTACTCAGATCGTGAAGCCATTCCCAAATGGATGCCCTTCATTTCATCTGTGAAGGTTAGCTATATTACTCAATCTCAAGTTGATTGATTACTGATCCTGAAAATATCTTCCATGTTTACTTGAAGATGTATTCTAGCAAATATTGTATAATGGAAGGAAACCTTCAACTTGTTTTGCTTATATGAGGAGAAAAGTTTGTGAGCCTTAGAGTAGTTTGTTATGAAAGTCTCTTATGTGAGTGAATGCAAGTGAGGGGCAGGTCTATGTTTATGTGCAAAGTGATAGAAGAAAGAACGATGAGAAAAATGGGCTGGCAATAGCCTATATTTTGGGAGAGAATCAAACCTTGGAACATCTAGTAACTTACAATTTAATTCCATAATCAATTGGTATTATAATGATTCTGCAACAAAATGAATGAATAGGAAGGGATGAGCTTTGCCTCTGAGATCCCATATCGATTGGGAAGCAGAGTGAAACATTCTTCATAAGGGTGTAAAAACCTCTTCCTAGTAGACGTGTTTTAAAACCTTGAGGAGAAGCCTGGAAGAGAAAATCCAAAGAGGGCAATATTTAAAAGTGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGTCAGACACCAAATAATATGCTAGCAAGGAAGCTGAGCCCCAGGGGGGTGGACACGAGGCGGTGTGCCAGCAAGAATGCTAGGCCCCGAAGGGGGGTGGACACGAGGCAGTGTGCCAGCAAGGACGCTGCGCTCCGAAGGGGGGTGAATTGGGGAGTCCCACATCAATTGGAGAAGGAAACGAGTGTCAGTGAGGGCACTGGAACCCGAAGGGGGGTGGATTGTGGGATCCCACATTGGTTGGGGAAGAGAACGAAACATTATTTATAAAGGTGTGGAAAACCTCTTCTTAACAGACACGTTTTAAAACCTTGACTGGAAGCCTAGAAGAAAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAGTTTTGGCCAGAGATAACTACAATATTTTTTGTTGTCACTTCGGTTGACGTTTGGTCTTGGTTAAGTTGATCATTTGTAGTCCTCCCATGGGTGCACTTGCTTTCTATGTAAAACCATTAGGTAGGCTTAAGAAGTACAAATATCGATATGAAGCACAGACACCACATGACATTGGCACAATCATGTCATTTTTTAAAACTCTAAGAAACAGACACGGCAAAAACACGCGTATTAATACATATTATTTTTTACACTGCATAGAAAGTCAAAGTCTTAAAAAAATTGTATTTAGAGTTTGATGTATTTTGCTCTCAAATGTTACATAGATTACTATTTTTGTCTTGTACGTTGAATTGGTGTTCGATACGTACCTATCAAATATTGGGCTTAGACCCACGTTCACTTTGTACAATACGTGTTCAATAAGTTCAGTGTCCTAACACATGTCTAATATGCCATGTTTGTTTACTGCCAACACTTAAATCTTGGTACAGTTGAGCAATTTTTAGTTATCAGATAGATTGCACAATTTGAGAACTTGTTCCGTACTGTTTATAGGTTTTGGAAGATAATCCTACTTTATCACGGTGGTCATTAAAATACAATGCCTTTGGTCAAGATATTGAGTTCTCTTGGCTTGCTCGGAACTTGCAGGCAAACAATTCTATTCCTTGAACCTTTCATTTAACATCCATCATTTCATTAAATGCTCTGCACATTTTTTCTGTTCTTAAACTGTTATCCGATAATATTACAGCCGACCCTCAATCAAAAAATCCATTGGCGGTCTCTCGAAGGTCTTCCAAACAGGTACCTCCAAAATTTTATTTCAGAACCATTCTCAGTGTCTTGTGAATTGTTTTGTAACGGCTCGTGCCCACCGCTAGCAGATATTGTCCTCTTTGAGTTTTTTCTTTCGGGATTTCCCTCAAGGTTTTTAAAACGCGTTTGTTAGGGAGAGGTTTACACACTCTTATAAAGGGTGTTTCGTTCTCCTCTCCAACCAATGTGGGATCTTGACTTCGTTCTATAGGGTCTTTGCCGTTTTCTTGTTCTTCTGAGTGTATTCTGAATCATAACACAATCTCGAGGCCTTTAAATCTTTGTTTCATTTGCAGAGGTGTTGTTCGATTTTATCCAAAAGGCCCATCATCTTGCCTCGTAGAAGTAAGCCTACAATGTCCCAATTGACATGTTTGTATCCTTCTTGGTTAAATCATTGGAGATATCTTTACATTATGATCCACCTAATGAAATCATGTGCTTGAAAAAGTAGATTAAACGTCATATTGCAGCCAACTTTTCCATAAAAACCAACACAAAGTGTCGGGTAATCATGCGCTTACTCTAGATTTCTTGTTTGGTCGTTTTCAGCTGACTGTCTCTTATGAAGTTCCACCTCTTTTATCTCCAGTGGCATCTGTAAGCTTTCTAGCCAATTATTAGCTTGTAAACACATAATCAATCATGATTCTTGAAGAACACAATCCAAAATTCTCATATTCGTATGATTTTTGCAAATGCAGGCATTGCAACCTTTGCTTGAGAGATTACTTAAACGAGGTCTCGAAAGCTTTGCCACATTTGCTAAGAAATACCAAACGGCTTGAAGACGGGTATTTGTGTCATATGGTATGGATATCACCATTTTTTACTAGATACTCTTATTGACAAATGTAAAATCTTGAACACAATACTTGAATACAATCATCTGTTTCAATAAGAAATTAATGTACTTTACAAAAATATTCTGAGTCCAGCTGATTTATTGGGTTATACATATGTTCTTAATCTC

mRNA sequence

TTCGTTCGTCTGCCTCTCTGACGGCCTTGATATTGTTGTGGCTCTGAAAAGACGGAGAGATTTTCAGAGGCTGTTCTTGCATTTGGTGCCCTCAACTCTCTGCTCACCACTCCCTTTGTGTCCAGTCGCTCTCTTCTTCTTCACGAATTTTAAATCCCAGTATGTCACTTGCAGCGCTCACCTGTAATTCGAATCCAAACACTCTGAATCTCAGTCATCGATCGATAAGAAGGAGTAATGGCGTCTTATTCATGGCGATTCCCACTCGCAGAAGCATCAATTCGAGGTCACTATCTCTTCCCAAGCTCCTCTTCAGAATCCCACGGAGTTCTTCGAAGTGCCGCAGAAACCCCATTTCCCCTCGAGTTAAATTCGTCTCCCCTGTGATGGAATGGCAGAATTGCACGGCCAAGATGGAAGTAGACATTCCTGCCTCGGTTGCTTATAAATGCTACTCAGATCGTGAAGCCATTCCCAAATGGATGCCCTTCATTTCATCTGTGAAGCCGACCCTCAATCAAAAAATCCATTGGCGGTCTCTCGAAGGTCTTCCAAACAGAGGTGTTGTTCGATTTTATCCAAAAGGCCCATCATCTTGCCTCGTAGAACTGACTGTCTCTTATGAAGTTCCACCTCTTTTATCTCCAGTGGCATCTGCATTGCAACCTTTGCTTGAGAGATTACTTAAACGAGGTCTCGAAAGCTTTGCCACATTTGCTAAGAAATACCAAACGGCTTGAAGACGGGTATTTGTGTCATATGGTATGGATATCACCATTTTTTACTAGATACTCTTATTGACAAATGTAAAATCTTGAACACAATACTTGAATACAATCATCTGTTTCAATAAGAAATTAATGTACTTTACAAAAATATTCTGAGTCCAGCTGATTTATTGGGTTATACATATGTTCTTAATCTC

Coding sequence (CDS)

ATGTCACTTGCAGCGCTCACCTGTAATTCGAATCCAAACACTCTGAATCTCAGTCATCGATCGATAAGAAGGAGTAATGGCGTCTTATTCATGGCGATTCCCACTCGCAGAAGCATCAATTCGAGGTCACTATCTCTTCCCAAGCTCCTCTTCAGAATCCCACGGAGTTCTTCGAAGTGCCGCAGAAACCCCATTTCCCCTCGAGTTAAATTCGTCTCCCCTGTGATGGAATGGCAGAATTGCACGGCCAAGATGGAAGTAGACATTCCTGCCTCGGTTGCTTATAAATGCTACTCAGATCGTGAAGCCATTCCCAAATGGATGCCCTTCATTTCATCTGTGAAGCCGACCCTCAATCAAAAAATCCATTGGCGGTCTCTCGAAGGTCTTCCAAACAGAGGTGTTGTTCGATTTTATCCAAAAGGCCCATCATCTTGCCTCGTAGAACTGACTGTCTCTTATGAAGTTCCACCTCTTTTATCTCCAGTGGCATCTGCATTGCAACCTTTGCTTGAGAGATTACTTAAACGAGGTCTCGAAAGCTTTGCCACATTTGCTAAGAAATACCAAACGGCTTGA

Homology

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BLAST of CmoCh08G004840 vs. TrEMBL
Match: A0A0A0K6F1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G414450 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 6.6e-82
Identity = 166/224 (74.11%), Postives = 177/224 (79.02%), Query Frame = 1


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKC 60
           MS+A LT NS+PN+L L HRSIRR NG++FMAIPT RSINSRS SLP L+F+IPR+SSK 
Sbjct: 1   MSIAPLTSNSSPNSLILIHRSIRRRNGIIFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK----- 120
            RNP+    KFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK     
Sbjct: 61  SRNPL----KFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDN 120

Query: 121 ---------------------------PTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLV 180
                                      PT NQKIHWRSLEGLPNRGVVRFYPKGPSSCLV
Sbjct: 121 PTLSRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLV 180

Query: 181 ELTVSYEVPPLLSPVASALQPLLERLLKRGLESFATFAKKYQTA 193
           ELTVSYEVPPLLSPVASALQPLLERLL+RGL+SFATFAKKYQTA
Sbjct: 181 ELTVSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA 220

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BLAST of CmoCh08G004840 vs. TrEMBL
Match: B7FHB4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.9e-53
Identity = 122/210 (58.10%), Postives = 139/210 (66.19%), Query Frame = 1


Query: 13  NTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKCRRNPISPRVKFV 72
           +T + S+R+ R +    F A  T RS  S SLS  +  FR+P +S   +R+P   R K  
Sbjct: 17  STTSSSNRNARTT----FAANFTSRSFPSTSLSSNRFFFRLPHTSFS-KRSPTFRRFKRF 76

Query: 73  SPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK----------------- 132
           SPVMEWQ+CT KMEVD+P SVAY CYSDREAIP+WMPFIS+VK                 
Sbjct: 77  SPVMEWQDCTVKMEVDVPISVAYACYSDREAIPEWMPFISTVKILPAKPDLSQWSLKYKA 136

Query: 133 ---------------PTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLL 191
                          PT NQKIHWRSL+GLPNRG VRFYPKGPSSCLVELTVSYEVP LL
Sbjct: 137 FGQNIEFSWLARNMQPTPNQKIHWRSLDGLPNRGAVRFYPKGPSSCLVELTVSYEVPQLL 196

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BLAST of CmoCh08G004840 vs. TrEMBL
Match: G7IBT4_MEDTR (Polyketide cyclase/dehydrase and lipid transporter OS=Medicago truncatula GN=MTR_1g086340 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.4e-53
Identity = 122/213 (57.28%), Postives = 139/213 (65.26%), Query Frame = 1


Query: 13  NTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKCRRNPISPRVKFV 72
           +T + S+R+ R +    F A  T RS  S SLS  +  FR+P +S   +R+P   R K  
Sbjct: 17  STTSSSNRNARTT----FAANFTSRSFPSTSLSSNRFFFRLPHTSFS-KRSPTFRRFKRF 76

Query: 73  SPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK----------------- 132
           SPVMEWQ+CT KMEVD+P SVAY CYSDREAIP+WMPFIS+VK                 
Sbjct: 77  SPVMEWQDCTVKMEVDVPISVAYACYSDREAIPEWMPFISTVKILPDKPDLSQWSLKYKA 136

Query: 133 ------------------PTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVP 191
                             PT NQKIHWRSL+GLPNRG VRFYPKGPSSCLVELTVSYEVP
Sbjct: 137 FGQNIEFSWLARNMQEKIPTPNQKIHWRSLDGLPNRGAVRFYPKGPSSCLVELTVSYEVP 196

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BLAST of CmoCh08G004840 vs. TrEMBL
Match: A0A061DSJ3_THECC (Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Theobroma cacao GN=TCM_004900 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.1e-52
Identity = 119/219 (54.34%), Postives = 138/219 (63.01%), Query Frame = 1


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKC 60
           MS AA++  S+PN+  LSH S      +L  A P+ R  + +  SL  +  RIP  S K 
Sbjct: 1   MSSAAISFISSPNSPRLSHVSPTNRYAILLTATPSCRISSLKPPSLSSIFIRIPYGSFK- 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK----- 120
            ++      +  SPVMEWQ+CT K E+D+PAS+AYKCYSDREAIP WMPFISSVK     
Sbjct: 61  -KSSFFTSSRTFSPVMEWQDCTVKTEIDVPASMAYKCYSDREAIPNWMPFISSVKILEDK 120

Query: 121 ---------------------------PTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLV 180
                                      P  NQKIHWRSLEGLPNRGVVRFYPKGPSSC+V
Sbjct: 121 PNLSRWSLKYNAFGRDIEYSWLARNMQPIPNQKIHWRSLEGLPNRGVVRFYPKGPSSCVV 180

Query: 181 ELTVSYEVPPLLSPVASALQPLLERLLKRGLESFATFAK 188
           ELTVSYEVP LL+PVASALQP LE LLKRGL+ F  FAK
Sbjct: 181 ELTVSYEVPQLLAPVASALQPFLENLLKRGLDRFENFAK 217

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BLAST of CmoCh08G004840 vs. TrEMBL
Match: A0A0B0NN66_GOSAR (Uncharacterized protein 17.2 kDa protein in melC2-rnhH intergenic region OS=Gossypium arboreum GN=F383_22398 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.0e-50
Identity = 117/207 (56.52%), Postives = 132/207 (63.77%), Query Frame = 1


Query: 13  NTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKCRRNPISPRVKFV 72
           ++L L+H      N +LF AI + R  + +S SL  +  RIP  S K      S R    
Sbjct: 10  SSLRLTHVFPTNGNAILFNAISSCRISSLKSPSLNSIFIRIPYGSFKKASFFTSSRP--F 69

Query: 73  SPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSV------------------ 132
           SPVMEWQ+CTAKME+D+PASVAYKCYSDREAIP WMPFISSV                  
Sbjct: 70  SPVMEWQDCTAKMEIDVPASVAYKCYSDREAIPNWMPFISSVQVLEDKPDLSRWSLKYKA 129

Query: 133 --------------KPTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLL 188
                         +P  NQKIHWRSLEGLPNRG VRFYPKGPSSCL+ELTVSYEVP LL
Sbjct: 130 FGRDIEYSWLARNMQPIPNQKIHWRSLEGLPNRGAVRFYPKGPSSCLIELTVSYEVPQLL 189

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BLAST of CmoCh08G004840 vs. TAIR10
Match: AT1G02475.1 (AT1G02475.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-42
Identity = 92/165 (55.76%), Postives = 107/165 (64.85%), Query Frame = 1


Query: 56  SSSKCRRNP-ISPRVKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSV 115
           SSS  RR+  I P+ +  S  MEWQ+C+ KMEVD+P SVAY  Y DRE+ PKWMPFISSV
Sbjct: 53  SSSVSRRSRFIIPKRRRFSVSMEWQDCSVKMEVDVPVSVAYNFYLDRESFPKWMPFISSV 112

Query: 116 --------------------------------KPTLNQKIHWRSLEGLPNRGVVRFYPKG 175
                                           +PT NQKIHWRSLEGLPN+G VRF+PKG
Sbjct: 113 QVLKDKPDLSRWSLKYNAFGQDIKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKG 172

Query: 176 PSSCLVELTVSYEVPPLLSPVASALQPLLERLLKRGLESFATFAK 188
           PSSC+VELTVSYEVP LL+PVAS L+P +E LL+ GLE FA  AK
Sbjct: 173 PSSCIVELTVSYEVPALLTPVASVLRPFIESLLRGGLERFAALAK 217

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BLAST of CmoCh08G004840 vs. TAIR10
Match: AT4G01883.1 (AT4G01883.1 Polyketide cyclase / dehydrase and lipid transport protein)

HSP 1 Score: 148.7 bits (374), Expect = 3.7e-36
Identity = 78/149 (52.35%), Postives = 92/149 (61.74%), Query Frame = 1


Query: 75  VMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK------------------- 134
           +MEWQ C  KM+V++P SVAY  YS+RE+IPKWM FISSVK                   
Sbjct: 75  LMEWQECKVKMKVEVPVSVAYGLYSERESIPKWMTFISSVKVLKDKPDLSRWTLKYKAFG 134

Query: 135 -------------PTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLLSP 192
                        P  NQKIHW SLEGLPN+G VRF+P GPSSC VELT +YEVP LL P
Sbjct: 135 QNLEYAWLAKNLQPLPNQKIHWISLEGLPNKGTVRFFPLGPSSCDVELTFAYEVPLLLIP 194

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BLAST of CmoCh08G004840 vs. TAIR10
Match: AT1G02470.2 (AT1G02470.2 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34
Identity = 92/226 (40.71%), Postives = 125/226 (55.31%), Query Frame = 1


Query: 2   SLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKCR 61
           S+A+ T ++  +TL    R I +S  VL M       ++  S S P++L  +  SS+   
Sbjct: 3   SIASGTVSTTRSTL--CFRKIPKSATVLSM-------LHRSSSSSPRMLLLLSSSSANSA 62

Query: 62  RNP-------ISPRVKFVSPVMEWQNCT-AKMEVDIPASVAYKCYSDREAIPKWMPFISS 121
           +         IS   K   PVM+WQ+ T  KM VD PASVAYK Y+DRE  PKWMPF+SS
Sbjct: 63  KLLNSNNGLLISSSPKPFRPVMQWQDVTRVKMVVDAPASVAYKLYADREMFPKWMPFLSS 122

Query: 122 VK--------------------------------PTLNQKIHWRSLEGLPNRGVVRFYPK 181
           V+                                P  ++KIHWRS+EG  NRG VRF+P+
Sbjct: 123 VEAMEGSPDLSRYLVKLESFGQNIEYHFLAKNLQPIPDRKIHWRSIEGFENRGSVRFFPR 182

Query: 182 GPSSCLVELTVSYEVPPLLSPVASALQPLLERLLKRGLESFATFAK 188
           GPSSCLVE++ SYEVP   +PVA A++P +E++++ GLE FA F K
Sbjct: 183 GPSSCLVEISFSYEVPNAFAPVAFAMKPFMEKIIRGGLERFAAFVK 219

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BLAST of CmoCh08G004840 vs. NCBI nr
Match: gi|659122926|ref|XP_008461396.1| (PREDICTED: uncharacterized protein LOC103499992 isoform X1 [Cucumis melo])

HSP 1 Score: 323.2 bits (827), Expect = 3.1e-85
Identity = 170/224 (75.89%), Postives = 179/224 (79.91%), Query Frame = 1


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKC 60
           MS+A LT NS PN+L L HRSIRR NG+LFMAIPT RSINSRS SLP L+F+IPR+SSK 
Sbjct: 1   MSIAPLTSNSTPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK----- 120
            RNPI PR+KFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK     
Sbjct: 61  SRNPICPRLKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDN 120

Query: 121 ---------------------------PTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLV 180
                                      PT NQKIHWRSLEGLPNRGVVRFYPKGPSSCLV
Sbjct: 121 PSLSRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLV 180

Query: 181 ELTVSYEVPPLLSPVASALQPLLERLLKRGLESFATFAKKYQTA 193
           ELTVSYEVPPLLSPVASALQPLLERLL+RGL+SFATFAKKYQTA
Sbjct: 181 ELTVSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA 224

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BLAST of CmoCh08G004840 vs. NCBI nr
Match: gi|449436387|ref|XP_004135974.1| (PREDICTED: uncharacterized protein LOC101216857 isoform X1 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 9.5e-82
Identity = 166/224 (74.11%), Postives = 177/224 (79.02%), Query Frame = 1


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKC 60
           MS+A LT NS+PN+L L HRSIRR NG++FMAIPT RSINSRS SLP L+F+IPR+SSK 
Sbjct: 1   MSIAPLTSNSSPNSLILIHRSIRRRNGIIFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK----- 120
            RNP+    KFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK     
Sbjct: 61  SRNPL----KFVSPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDN 120

Query: 121 ---------------------------PTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLV 180
                                      PT NQKIHWRSLEGLPNRGVVRFYPKGPSSCLV
Sbjct: 121 PTLSRWSLKYNAFGQDIEFSWLARNLQPTPNQKIHWRSLEGLPNRGVVRFYPKGPSSCLV 180

Query: 181 ELTVSYEVPPLLSPVASALQPLLERLLKRGLESFATFAKKYQTA 193
           ELTVSYEVPPLLSPVASALQPLLERLL+RGL+SFATFAKKYQTA
Sbjct: 181 ELTVSYEVPPLLSPVASALQPLLERLLQRGLKSFATFAKKYQTA 220

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BLAST of CmoCh08G004840 vs. NCBI nr
Match: gi|217071566|gb|ACJ84143.1| (unknown [Medicago truncatula])

HSP 1 Score: 216.5 bits (550), Expect = 4.2e-53
Identity = 122/210 (58.10%), Postives = 139/210 (66.19%), Query Frame = 1


Query: 13  NTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKCRRNPISPRVKFV 72
           +T + S+R+ R +    F A  T RS  S SLS  +  FR+P +S   +R+P   R K  
Sbjct: 17  STTSSSNRNARTT----FAANFTSRSFPSTSLSSNRFFFRLPHTSFS-KRSPTFRRFKRF 76

Query: 73  SPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK----------------- 132
           SPVMEWQ+CT KMEVD+P SVAY CYSDREAIP+WMPFIS+VK                 
Sbjct: 77  SPVMEWQDCTVKMEVDVPISVAYACYSDREAIPEWMPFISTVKILPAKPDLSQWSLKYKA 136

Query: 133 ---------------PTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPLL 191
                          PT NQKIHWRSL+GLPNRG VRFYPKGPSSCLVELTVSYEVP LL
Sbjct: 137 FGQNIEFSWLARNMQPTPNQKIHWRSLDGLPNRGAVRFYPKGPSSCLVELTVSYEVPQLL 196

[Close]

BLAST of CmoCh08G004840 vs. NCBI nr
Match: gi|357442113|ref|XP_003591334.1| (polyketide cyclase/dehydrase and lipid transporter [Medicago truncatula])

HSP 1 Score: 215.3 bits (547), Expect = 9.2e-53
Identity = 122/213 (57.28%), Postives = 139/213 (65.26%), Query Frame = 1


Query: 13  NTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKCRRNPISPRVKFV 72
           +T + S+R+ R +    F A  T RS  S SLS  +  FR+P +S   +R+P   R K  
Sbjct: 17  STTSSSNRNARTT----FAANFTSRSFPSTSLSSNRFFFRLPHTSFS-KRSPTFRRFKRF 76

Query: 73  SPVMEWQNCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVK----------------- 132
           SPVMEWQ+CT KMEVD+P SVAY CYSDREAIP+WMPFIS+VK                 
Sbjct: 77  SPVMEWQDCTVKMEVDVPISVAYACYSDREAIPEWMPFISTVKILPDKPDLSQWSLKYKA 136

Query: 133 ------------------PTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVP 191
                             PT NQKIHWRSL+GLPNRG VRFYPKGPSSCLVELTVSYEVP
Sbjct: 137 FGQNIEFSWLARNMQEKIPTPNQKIHWRSLDGLPNRGAVRFYPKGPSSCLVELTVSYEVP 196

[Close]

BLAST of CmoCh08G004840 vs. NCBI nr
Match: gi|1009148206|ref|XP_015891813.1| (PREDICTED: uncharacterized protein LOC107426207 isoform X3 [Ziziphus jujuba])

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-52
Identity = 108/150 (72.00%), Postives = 119/150 (79.33%), Query Frame = 1


Query: 45  SLPKLLFRIPRSSSKCRRNPISPRVKFV-----SPVMEWQNCTAKMEVDIPASVAYKCYS 104
           SL +  FRIP  S       ++P+  F      SPVMEWQ+CT KMEVD+P SVAYKCYS
Sbjct: 72  SLSRPFFRIPCHS-------LNPKTVFTHSRRFSPVMEWQDCTVKMEVDVPISVAYKCYS 131

Query: 105 DREAIPKWMPFISSVKPTLNQKIHWRSLEGLPNRGVVRFYPKGPSSCLVELTVSYEVPPL 164
           DREAIP+WMPFISSVKP  NQKIHWRS+EGLPNRG VRFYPKGPSSC+VELTVSYEVP L
Sbjct: 132 DREAIPRWMPFISSVKPIPNQKIHWRSMEGLPNRGAVRFYPKGPSSCIVELTVSYEVPQL 191

Query: 165 LSPVASALQPLLERLLKRGLESFATFAKKY 190
           L+PVASALQP L+ LL RGLE FATFAK Y
Sbjct: 192 LTPVASALQPFLQSLLIRGLERFATFAKSY 214

The following BLAST results are available for this feature:

BLAST of CmoCh08G004840 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh08G004840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6F1_CUCSA	6.6e-82	74.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G414450 PE=4 SV=1	[more]
B7FHB4_MEDTR	2.9e-53	58.10	Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
G7IBT4_MEDTR	6.4e-53	57.28	Polyketide cyclase/dehydrase and lipid transporter OS=Medicago truncatula GN=MTR...	[more]
A0A061DSJ3_THECC	7.1e-52	54.34	Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Theobrom...	[more]
A0A0B0NN66_GOSAR	3.0e-50	56.52	Uncharacterized protein 17.2 kDa protein in melC2-rnhH intergenic region OS=Goss...	[more]

BLAST of CmoCh08G004840 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02475.1	1.2e-42	55.76	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT4G01883.1	3.7e-36	52.35	Polyketide cyclase / dehydrase and lipid transport protein	[more]
AT1G02470.2	1.2e-34	40.71	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]

BLAST of CmoCh08G004840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659122926\|ref\|XP_008461396.1\|	3.1e-85	75.89	PREDICTED: uncharacterized protein LOC103499992 isoform X1 [Cucumis melo]	[more]
gi\|449436387\|ref\|XP_004135974.1\|	9.5e-82	74.11	PREDICTED: uncharacterized protein LOC101216857 isoform X1 [Cucumis sativus]	[more]
gi\|217071566\|gb\|ACJ84143.1\|	4.2e-53	58.10	unknown [Medicago truncatula]	[more]
gi\|357442113\|ref\|XP_003591334.1\|	9.2e-53	57.28	polyketide cyclase/dehydrase and lipid transporter [Medicago truncatula]	[more]
gi\|1009148206\|ref\|XP_015891813.1\|	1.2e-52	72.00	PREDICTED: uncharacterized protein LOC107426207 isoform X3 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G004840.1	CmoCh08G004840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33824	FAMILY NOT NAMED	coord: 1..190 score: 9.3
None	No IPR available	PANTHER	PTHR33824:SF3	POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED	coord: 1..190 score: 9.3
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 81..187 score: 1.47

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G004840	Cucsa.128550	Cucumber (Gy14) v1	cgycmoB0342
CmoCh08G004840	Cla015172	Watermelon (97103) v1	cmowmB843
CmoCh08G004840	Csa7G414450	Cucumber (Chinese Long) v2	cmocuB900
CmoCh08G004840	MELO3C023625	Melon (DHL92) v3.5.1	cmomeB808
CmoCh08G004840	ClCG09G004770	Watermelon (Charleston Gray)	cmowcgB785
CmoCh08G004840	CSPI07G18470	Wild cucumber (PI 183967)	cmocpiB913
CmoCh08G004840	Lsi02G025070	Bottle gourd (USVL1VR-Ls)	cmolsiB809
CmoCh08G004840	Cp4.1LG17g07670	Cucurbita pepo (Zucchini)	cmocpeB853
CmoCh08G004840	MELO3C023625.2	Melon (DHL92) v3.6.1	cmomedB911
CmoCh08G004840	CsaV3_7G030310	Cucumber (Chinese Long) v3	cmocucB1066
CmoCh08G004840	Cla97C09G167180	Watermelon (97103) v2	cmowmbB916
CmoCh08G004840	Bhi09G000639	Wax gourd	cmowgoB1126
CmoCh08G004840	Carg13404	Silver-seed gourd	carcmoB0610

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G004840	Watermelon (97103) v2	cmowmbB881
CmoCh08G004840	Cucurbita moschata (Rifu)	cmocmoB229
CmoCh08G004840	Cucurbita moschata (Rifu)	cmocmoB319
CmoCh08G004840	Cucurbita moschata (Rifu)	cmocmoB378
CmoCh08G004840	Cucurbita maxima (Rimu)	cmacmoB276
CmoCh08G004840	Cucurbita maxima (Rimu)	cmacmoB374
CmoCh08G004840	Cucurbita maxima (Rimu)	cmacmoB490
CmoCh08G004840	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G004840	Watermelon (Charleston Gray)	cmowcgB790
CmoCh08G004840	Watermelon (97103) v1	cmowmB849
CmoCh08G004840	Cucurbita pepo (Zucchini)	cmocpeB839
CmoCh08G004840	Cucurbita pepo (Zucchini)	cmocpeB861
CmoCh08G004840	Bottle gourd (USVL1VR-Ls)	cmolsiB817
CmoCh08G004840	Cucumber (Gy14) v2	cgybcmoB955
CmoCh08G004840	Silver-seed gourd	carcmoB0157
CmoCh08G004840	Silver-seed gourd	carcmoB1034
CmoCh08G004840	Silver-seed gourd	carcmoB1107