Cucsa.121710 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.121710
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Reticulon-like protein
Location	scaffold00999 : 168721 .. 170529 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCCCTATATACCCACCTCTCATTGCAATTCATTATACCCTCTAAAACAAAACAAAACAAAAACTTCAACTACTCATCTTCCAAACTTCTCATCCTTATTATCATGTCGAGCTACTCCGACTCCGACGATGATTCGGTACCTCGTTCGAAGCTCTTCGGTCGCCGCCGCCCCGTTTATGATATTTTTGGAGGAGGAAGAGGTAAATTAAAAATTAAATTCCTTAGTTTGTCTAATTAATTTAATTGCTCTATTGTTATATCGTGATATTTAAAGTGAGAAAAAGAATAAAAAAaTAGAATCGAGATTATTTAGAGATATAGTTAGGATTTTAGCGTGTTGAAACGAAACTTCAAAATACTATGTAAAACATTAAGCAACATAACATAATAGGTTTGAGGCGGGAGAACACGACTTTTTATTATCACTTGAAATATATTTGTTGCTAATAAAAACAAGAAACATTTTCAAATATAGGGTTTATCAAAATTTCTCTTAAAACAATGTATTTGACAGAAGATTTTTTAGTTTtAAATTTTAGTACAAAGCTGTAGAACTGAATCACATGCATGTGAATACCATTTGTAAGTTTCTTAGTGTATATGATGATTATGATACGATGGGAATGAGGAAATGAAAGGAAGATAGAAAGTAATTATAACATTGGATACATAAATTTTTGGAATGATGCAGTTGCAGACATACTGTTATGGAAAGACAAGAAGAAGTCGGCAGGATTACTTTTGGGAATGACAGTGCTATGGTTTTTGTTTGAGATTGTTGAATACAACTTTGTCACTCTTATTTGTCATCTCTCTATTACCTCCATGCTCATCTTCTTCATTTGGTGCACCGGTGCTGAATTTTTCAAATGGTAATATATATATTTATATGTACTGTATCATCCATGATCAATAGTTTAATTTCTGATGTATATGTTATGATGATCATATCCATAATGTTATAATTATTAGGAATCCTCCACGGCTTCCAGAAGCAATATTGAAAGAATCAACATTCAAAGACGTTGCTTCCACTTTGCACAGAAGAATCAACCAATTCTTCACCAAGATTTTCGATATCGCTTATGGAAAAGATCTCCCACTCTTCTTTCTGGTATGTAATTAGTTTTTGGAATTAGATGGAAGATATTTTGCTAATGGTAATGGGTCTTTAATTATCACTTTTtCAGGCCATTGTTTCACTCTATCTTTtATCAGTGATTGGATCATACGTTAGCTTTCTCAATCTCCTTTATTTCGGTAAGAAACATCTCATTACTCCCTCCATACACTAATATCAATAATTCTCTAaTTAAAACTATTTAGCTTCTATAATCAATGTTTACAAAACCTTCACAAATAGTCCATACAACTATATCAAATATGAAAAGAGACCAAATTTATAGTTTAACTTAGCTAATTTTTTCTTTTGTCTTGGTGGGGTTGAAAAAaTAATGTGTATATATATATGTATATGTATGAAGGATTTGTGGCATTGGAAACTTTGCCATTTCTATATGAGAAATATGAAGAGGAGGTTGATCAACTTGCTGGGATGGCCATTTATCAAACCAAGAAATCTTACAGAAATTTCGATGCCAAATTCCTCAACAAGATCCCAAGAGGACCTGTCAAAGACAAGAAACTCAGATGATTATTTCAATATACACTCTTTGTAATTAATCAATTATATATAAATCATATTATAACTTAATATGCCATCTCATGTAATAAATTAAAATTCTCCATCTCTAAATACATATATATTTAAAGTGAGTTTAATCATCCTTAAACTAATTAAACTACA

mRNA sequence

CTTCCCCTATATACCCACCTCTCATTGCAATTCATTATACCCTCTAAAACAAAACAAAACAAAAACTTCAACTACTCATCTTCCAAACTTCTCATCCTTATTATCATGTCGAGCTACTCCGACTCCGACGATGATTCGGTACCTCGTTCGAAGCTCTTCGGTCGCCGCCGCCCCGTTTATGATATTTTTGGAGGAGGAAGAGTTGCAGACATACTGTTATGGAAAGACAAGAAGAAGTCGGCAGGATTACTTTTGGGAATGACAGTGCTATGGTTTTTGTTTGAGATTGTTGAATACAACTTTGTCACTCTTATTTGTCATCTCTCTATTACCTCCATGCTCATCTTCTTCATTTGGTGCACCGGTGCTGAATTTTTCAAATGGAATCCTCCACGGCTTCCAGAAGCAATATTGAAAGAATCAACATTCAAAGACGTTGCTTCCACTTTGCACAGAAGAATCAACCAATTCTTCACCAAGATTTTCGATATCGCTTATGGAAAAGATCTCCCACTCTTCTTTCTGGCCATTGTTTCACTCTATCTTTTATCAGTGATTGGATCATACGTTAGCTTTCTCAATCTCCTTTATTTCGGATTTGTGGCATTGGAAACTTTGCCATTTCTATATGAGAAATATGAAGAGGAGGTTGATCAACTTGCTGGGATGGCCATTTATCAAACCAAGAAATCTTACAGAAATTTCGATGCCAAATTCCTCAACAAGATCCCAAGAGGACCTGTCAAAGACAAGAAACTCAGATGATTATTTCAATATACACTCTTTGTAATTAATCAATTATATATAAATCATATTATAACTTAATATGCCATCTCATGTAATAAATTAAAATTCTCCATCTCTAAATACATATATATTTAAAGTGAGTTTAATCATCCTTAAACTAATTAAACTACA

Coding sequence (CDS)

ATGTCGAGCTACTCCGACTCCGACGATGATTCGGTACCTCGTTCGAAGCTCTTCGGTCGCCGCCGCCCCGTTTATGATATTTTTGGAGGAGGAAGAGTTGCAGACATACTGTTATGGAAAGACAAGAAGAAGTCGGCAGGATTACTTTTGGGAATGACAGTGCTATGGTTTTTGTTTGAGATTGTTGAATACAACTTTGTCACTCTTATTTGTCATCTCTCTATTACCTCCATGCTCATCTTCTTCATTTGGTGCACCGGTGCTGAATTTTTCAAATGGAATCCTCCACGGCTTCCAGAAGCAATATTGAAAGAATCAACATTCAAAGACGTTGCTTCCACTTTGCACAGAAGAATCAACCAATTCTTCACCAAGATTTTCGATATCGCTTATGGAAAAGATCTCCCACTCTTCTTTCTGGCCATTGTTTCACTCTATCTTTtATCAGTGATTGGATCATACGTTAGCTTTCTCAATCTCCTTTATTTCGGATTTGTGGCATTGGAAACTTTGCCATTTCTATATGAGAAATATGAAGAGGAGGTTGATCAACTTGCTGGGATGGCCATTTATCAAACCAAGAAATCTTACAGAAATTTCGATGCCAAATTCCTCAACAAGATCCCAAGAGGACCTGTCAAAGACAAGAAACTCAGATGA

Protein sequence

MSSYSDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFEIVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRINQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR*

Homology

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BLAST of Cucsa.121710 vs. Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.8e-67
Identity = 116/217 (53.46%), Postives = 163/217 (75.12%), Query Frame = 1


Query: 3   SYSDSDDDSV--PRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE 62
           S SDS+D+      +KLF R+R ++ IFGGG+VADILLW++ K +A L++G+++LWFL E
Sbjct: 7   SSSDSEDERTIHKTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLME 66

Query: 63  IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN 122
           +VEYNF+TLICH S+TSML FFIW T ++F  W  P +PE +L ES+FK +A + H R N
Sbjct: 67  VVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFN 126

Query: 123 QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE 182
           Q  TK+ D+A G+D PLFFL  +SLY++S+IG+Y +F+NLL+ GFV+++TLP +YE YE+
Sbjct: 127 QILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYED 186

Query: 183 EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKK 218
           +VD  AG  + + KK Y+  D   L+KIPRG VK+KK
Sbjct: 187 DVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223

[Close]

BLAST of Cucsa.121710 vs. Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.9e-49
Identity = 97/229 (42.36%), Postives = 139/229 (60.70%), Query Frame = 1


Query: 2   SSYSDSDDDSVPRS-------------KLFGRRRPVYDIFGGGRVADILLWKDKKKSAGL 61
           SS S SDD++  +S             +LFGR RPV+ + GGG+ ADI +WKDKK S G+
Sbjct: 41  SSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGV 100

Query: 62  LLGMTVLWFLFEIVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTF 121
             G TV W LFE++EY+ +TL+CH+ I ++ + F+W     F   +PP++PE  + E   
Sbjct: 101 FGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPL 160

Query: 122 KDVASTLHRRINQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVAL 181
             +AS L   IN+  + + +IA G+D+  F  AI  L++LS++G   SFL L Y   V L
Sbjct: 161 LQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLL 220

Query: 182 ETLPFLYEKYEEEVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKK 218
            T+P  Y+KYE++VD     A+ + KK Y   DAK  +KIPRGP+KDKK
Sbjct: 221 FTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKK 269

[Close]

BLAST of Cucsa.121710 vs. Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.9e-47
Identity = 95/230 (41.30%), Postives = 140/230 (60.87%), Query Frame = 1


Query: 2   SSYSDSDDD-------SVPRS-------KLFGRRRPVYDIFGGGRVADILLWKDKKKSAG 61
           SS SD +D+       S P S       +LFGR +PV+ + GGG+ ADI +WK+KK S G
Sbjct: 44  SSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGG 103

Query: 62  LLLGMTVLWFLFEIVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKEST 121
           +L G T  W +FE++EY+ +TL+CH+ I  + + F+W     F   +PP++PE  + E  
Sbjct: 104 VLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEP 163

Query: 122 FKDVASTLHRRINQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVA 181
              +AS L   IN+ F+ + +IA G+DL  F +AI  L++LS++G   +FL L Y   V 
Sbjct: 164 ILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVL 223

Query: 182 LETLPFLYEKYEEEVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKK 218
           L T+P  Y+KYE++VD L   A+ + KK Y   D K L+KIP GP+K+KK
Sbjct: 224 LFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKK 273

[Close]

BLAST of Cucsa.121710 vs. Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.6e-46
Identity = 98/220 (44.55%), Postives = 136/220 (61.82%), Query Frame = 1


Query: 2   SSYSDSDDDSVPRS------KLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVL 61
           SS SDSDDD    S      +LFGR +P++ +FGGG+ ADI LW++KK S G+L   TV 
Sbjct: 27  SSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVS 86

Query: 62  WFLFEIVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTL 121
           W LFE++EYN +TL  H+SI ++ + F+W + + F   +P  +PE  + E     +AS L
Sbjct: 87  WILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGL 146

Query: 122 HRRINQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLY 181
              IN+ FT + DIA G+DL  F L I  L++LS +GS  +FL L+Y   V L T+P LY
Sbjct: 147 RIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLY 206

Query: 182 EKYEEEVDQLAGMAIYQTKKSYRNFDAKFL----NKIPRG 212
           EKYE++VD     A+ + KK Y  FD K L    +KIP+G
Sbjct: 207 EKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKG 246

[Close]

BLAST of Cucsa.121710 vs. Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.6e-45
Identity = 90/218 (41.28%), Postives = 136/218 (62.39%), Query Frame = 1


Query: 2   SSYSDSDDDSVPRSKL---FGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFL 61
           S Y   D  S  ++K+   FGR +PV+ + GGG+ AD+ LW+DKK S  +L   T +W L
Sbjct: 34  SEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVL 93

Query: 62  FEIVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRR 121
           FE+VEY+ ++L+CH+SI ++   F+W           P++PE  + E  F  VAS+L   
Sbjct: 94  FELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNE 153

Query: 122 INQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKY 181
           +NQ F  +  IA G+DL  F + +V L+++SV+G++ +FL L+Y  FV L T+P LYEK+
Sbjct: 154 LNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKH 213

Query: 182 EEEVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDK 217
           E++VD LA  A+ + +K Y  FD K L+KIP   +K K
Sbjct: 214 EDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAK 251

[Close]

BLAST of Cucsa.121710 vs. TrEMBL
Match: A0A0A0LTQ2_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_1G042570 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 9.8e-122
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1


Query: 1   MSSYSDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE 60
           MSSYSDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE
Sbjct: 1   MSSYSDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE 60

Query: 61  IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN 120
           IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN
Sbjct: 61  IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN 120

Query: 121 QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE 180
           QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE
Sbjct: 121 QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE 180

Query: 181 EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR 220
           EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR
Sbjct: 181 EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Cucsa.121710 vs. TrEMBL
Match: M5W8Z9_PRUPE (Reticulon-like protein OS=Prunus persica GN=PRUPE_ppa023407mg PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.5e-77
Identity = 135/216 (62.50%), Postives = 178/216 (82.41%), Query Frame = 1


Query: 4   YSDSDDDSVPR---SKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE 63
           YS   DD++     +KLFGR RP++ + GGG+VAD+LLW+++  SA LL+GMTV+WFLFE
Sbjct: 5   YSSDSDDNIGASHGAKLFGRERPIHHVLGGGKVADVLLWRNRNVSAALLIGMTVIWFLFE 64

Query: 64  IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN 123
           +VEYNFVTL+CHLSIT++L+ FIW T AE F+  PP +P+ IL ESTFK++AST+H+R N
Sbjct: 65  VVEYNFVTLVCHLSITTLLVIFIWRTAAELFRLTPPTIPDIILHESTFKELASTVHKRCN 124

Query: 124 QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE 183
            F +K+ D A G+DLP FFLAI+SLY+LSVIG+Y SFLNL+Y GF+ALETLPF+YE++EE
Sbjct: 125 HFLSKLLDSACGRDLPFFFLAIISLYILSVIGTYFSFLNLVYLGFLALETLPFVYERFEE 184

Query: 184 EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDK 217
           +VD+LAG    + K+SYR FD++FLNKIPRGPVK+K
Sbjct: 185 DVDRLAGKVSREIKRSYRKFDSQFLNKIPRGPVKEK 220

[Close]

BLAST of Cucsa.121710 vs. TrEMBL
Match: B9I2J5_POPTR (Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0012s05030g PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.6e-71
Identity = 132/216 (61.11%), Postives = 163/216 (75.46%), Query Frame = 1


Query: 5   SDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFEIVEY 64
           SDSD+++ PR+KLFGR+RP+  + GGG+VA +LLW++KK SA L  GMT+LWFLFE+ EY
Sbjct: 6   SDSDNETTPRTKLFGRQRPIRSVLGGGQVAGVLLWENKKVSAALSFGMTILWFLFEVAEY 65

Query: 65  NFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRINQFFT 124
           NFVTL  H+SIT+MLI FIWCT AEFF WNPP +P +IL +STF + A T H R NQ  +
Sbjct: 66  NFVTLFSHISITAMLIVFIWCTSAEFFNWNPPAIPRSILDKSTFHEFALTFHERFNQALS 125

Query: 125 KIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDQ 184
              DIA GK   LFF+AI  LY+LSVIG+Y +FLN LY  FV L+TLPFLY KYE+EV++
Sbjct: 126 SFVDIACGKQPALFFVAIFCLYILSVIGNYFTFLNFLYLCFVCLQTLPFLYNKYEDEVER 185

Query: 185 LAGMAIYQTKKSYRNFDAKFLNKIPRG-PVKDKKLR 220
            AG    + KK YR FD+  LNKIPRG PVK+KK R
Sbjct: 186 YAGKLTREVKKMYRRFDSNVLNKIPRGVPVKEKKGR 221

[Close]

BLAST of Cucsa.121710 vs. TrEMBL
Match: B9IE65_POPTR (Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0015s03930g PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.9e-70
Identity = 129/215 (60.00%), Postives = 165/215 (76.74%), Query Frame = 1


Query: 5   SDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFEIVEY 64
           SDS++++ PR+KLFGR+RP+  + GGG+VAD+LLW++KK SA L +GMTVLW LFE+ EY
Sbjct: 7   SDSENETTPRTKLFGRQRPIRSVLGGGQVADVLLWENKKVSAALSVGMTVLWLLFEVAEY 66

Query: 65  NFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRINQFFT 124
           N VTL  H+SI +MLI FIW T A+FF W+ P LP +IL +STF++ ASTLH R NQ  +
Sbjct: 67  NLVTLFSHISIATMLIVFIWFTTADFFNWSHPELPTSILDKSTFQEFASTLHGRSNQALS 126

Query: 125 KIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDQ 184
           K  DIA GK+  LFF+AI  LY+LSVIG+Y +FLN LY  FV L+TLPFLY KYE+EVD+
Sbjct: 127 KFMDIARGKEPALFFMAIFFLYILSVIGNYFTFLNFLYLCFVCLQTLPFLYNKYEDEVDR 186

Query: 185 LAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR 220
            AG  I + KK ++ FD+  LNKIPRGP K+KK R
Sbjct: 187 YAGKLIRRAKKMFKRFDSSVLNKIPRGPAKEKKTR 221

[Close]

BLAST of Cucsa.121710 vs. TrEMBL
Match: V4U109_9ROSI (Reticulon-like protein OS=Citrus clementina GN=CICLE_v10022074mg PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.9e-70
Identity = 128/221 (57.92%), Postives = 167/221 (75.57%), Query Frame = 1


Query: 2   SSYSDSDDDSVPRS-------KLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTV 61
           SS SD++    PR+       +L G +RP++DI GGG+VAD+LLWK+   SA LL+GMTV
Sbjct: 7   SSESDNEPSRPPRTTPRPRPPRLLGSQRPIHDILGGGKVADVLLWKNITVSASLLIGMTV 66

Query: 62  LWFLFEIVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVAST 121
           +WFLFE+VEYNFVTL+CH+SITSML  FIW  GAEFF W PP++PE IL+ESTF++VAST
Sbjct: 67  IWFLFEVVEYNFVTLLCHISITSMLALFIWSKGAEFFNWKPPQIPEVILRESTFREVAST 126

Query: 122 LHRRINQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFL 181
           L  R N+  +K+ D+A GKD  LF L I  LY+ SVIG+Y SFLNLLY GF+ + T+PFL
Sbjct: 127 LRVRFNKILSKLLDVACGKDPGLFILVIAILYIFSVIGTYFSFLNLLYLGFICILTVPFL 186

Query: 182 YEKYEEEVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKD 216
           Y++Y+E VD +A     + KK +R F+++FLNKIPRGPVK+
Sbjct: 187 YDRYDEHVDYIADREFRRMKKMFRRFNSQFLNKIPRGPVKE 227

[Close]

BLAST of Cucsa.121710 vs. TAIR10
Match: AT3G18260.1 (AT3G18260.1 Reticulon family protein)

HSP 1 Score: 255.4 bits (651), Expect = 3.3e-68
Identity = 116/217 (53.46%), Postives = 163/217 (75.12%), Query Frame = 1


Query: 3   SYSDSDDDSV--PRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE 62
           S SDS+D+      +KLF R+R ++ IFGGG+VADILLW++ K +A L++G+++LWFL E
Sbjct: 7   SSSDSEDERTIHKTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLME 66

Query: 63  IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN 122
           +VEYNF+TLICH S+TSML FFIW T ++F  W  P +PE +L ES+FK +A + H R N
Sbjct: 67  VVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFN 126

Query: 123 QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE 182
           Q  TK+ D+A G+D PLFFL  +SLY++S+IG+Y +F+NLL+ GFV+++TLP +YE YE+
Sbjct: 127 QILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYED 186

Query: 183 EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKK 218
           +VD  AG  + + KK Y+  D   L+KIPRG VK+KK
Sbjct: 187 DVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223

[Close]

BLAST of Cucsa.121710 vs. TAIR10
Match: AT4G11220.1 (AT4G11220.1 VIRB2-interacting protein 2)

HSP 1 Score: 197.2 bits (500), Expect = 1.1e-50
Identity = 97/229 (42.36%), Postives = 139/229 (60.70%), Query Frame = 1


Query: 2   SSYSDSDDDSVPRS-------------KLFGRRRPVYDIFGGGRVADILLWKDKKKSAGL 61
           SS S SDD++  +S             +LFGR RPV+ + GGG+ ADI +WKDKK S G+
Sbjct: 41  SSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGV 100

Query: 62  LLGMTVLWFLFEIVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTF 121
             G TV W LFE++EY+ +TL+CH+ I ++ + F+W     F   +PP++PE  + E   
Sbjct: 101 FGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPL 160

Query: 122 KDVASTLHRRINQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVAL 181
             +AS L   IN+  + + +IA G+D+  F  AI  L++LS++G   SFL L Y   V L
Sbjct: 161 LQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLL 220

Query: 182 ETLPFLYEKYEEEVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKK 218
            T+P  Y+KYE++VD     A+ + KK Y   DAK  +KIPRGP+KDKK
Sbjct: 221 FTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKK 269

[Close]

BLAST of Cucsa.121710 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1)

HSP 1 Score: 189.5 bits (480), Expect = 2.2e-48
Identity = 95/230 (41.30%), Postives = 140/230 (60.87%), Query Frame = 1


Query: 2   SSYSDSDDD-------SVPRS-------KLFGRRRPVYDIFGGGRVADILLWKDKKKSAG 61
           SS SD +D+       S P S       +LFGR +PV+ + GGG+ ADI +WK+KK S G
Sbjct: 44  SSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGG 103

Query: 62  LLLGMTVLWFLFEIVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKEST 121
           +L G T  W +FE++EY+ +TL+CH+ I  + + F+W     F   +PP++PE  + E  
Sbjct: 104 VLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEP 163

Query: 122 FKDVASTLHRRINQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVA 181
              +AS L   IN+ F+ + +IA G+DL  F +AI  L++LS++G   +FL L Y   V 
Sbjct: 164 ILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVL 223

Query: 182 LETLPFLYEKYEEEVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKK 218
           L T+P  Y+KYE++VD L   A+ + KK Y   D K L+KIP GP+K+KK
Sbjct: 224 LFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKK 273

[Close]

BLAST of Cucsa.121710 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein)

HSP 1 Score: 183.0 bits (463), Expect = 2.1e-46
Identity = 90/218 (41.28%), Postives = 136/218 (62.39%), Query Frame = 1


Query: 2   SSYSDSDDDSVPRSKL---FGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFL 61
           S Y   D  S  ++K+   FGR +PV+ + GGG+ AD+ LW+DKK S  +L   T +W L
Sbjct: 34  SEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVL 93

Query: 62  FEIVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRR 121
           FE+VEY+ ++L+CH+SI ++   F+W           P++PE  + E  F  VAS+L   
Sbjct: 94  FELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNE 153

Query: 122 INQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKY 181
           +NQ F  +  IA G+DL  F + +V L+++SV+G++ +FL L+Y  FV L T+P LYEK+
Sbjct: 154 LNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKH 213

Query: 182 EEEVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDK 217
           E++VD LA  A+ + +K Y  FD K L+KIP   +K K
Sbjct: 214 EDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAK 251

[Close]

BLAST of Cucsa.121710 vs. TAIR10
Match: AT1G64090.2 (AT1G64090.2 Reticulan like protein B3)

HSP 1 Score: 176.0 bits (445), Expect = 2.5e-44
Identity = 98/236 (41.53%), Postives = 136/236 (57.63%), Query Frame = 1


Query: 2   SSYSDSDDDSVPRS------KLFGRRRPVYDIFGGGR----------------VADILLW 61
           SS SDSDDD    S      +LFGR +P++ +FGGG+                 ADI LW
Sbjct: 27  SSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKHSENQDINERFGLVFAAADIFLW 86

Query: 62  KDKKKSAGLLLGMTVLWFLFEIVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLP 121
           ++KK S G+L   TV W LFE++EYN +TL  H+SI ++ + F+W + + F   +P  +P
Sbjct: 87  RNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIP 146

Query: 122 EAILKESTFKDVASTLHRRINQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLN 181
           E  + E     +AS L   IN+ FT + DIA G+DL  F L I  L++LS +GS  +FL 
Sbjct: 147 EVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLT 206

Query: 182 LLYFGFVALETLPFLYEKYEEEVDQLAGMAIYQTKKSYRNFDAKFL----NKIPRG 212
           L+Y   V L T+P LYEKYE++VD     A+ + KK Y  FD K L    +KIP+G
Sbjct: 207 LIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKG 262

[Close]

BLAST of Cucsa.121710 vs. NCBI nr
Match: gi|449439423|ref|XP_004137485.1| (PREDICTED: reticulon-like protein B9 [Cucumis sativus])

HSP 1 Score: 444.1 bits (1141), Expect = 1.4e-121
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1


Query: 1   MSSYSDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE 60
           MSSYSDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE
Sbjct: 1   MSSYSDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE 60

Query: 61  IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN 120
           IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN
Sbjct: 61  IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN 120

Query: 121 QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE 180
           QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE
Sbjct: 121 QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE 180

Query: 181 EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR 220
           EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR
Sbjct: 181 EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Cucsa.121710 vs. NCBI nr
Match: gi|659066782|ref|XP_008461104.1| (PREDICTED: reticulon-like protein B9 [Cucumis melo])

HSP 1 Score: 424.5 bits (1090), Expect = 1.1e-115
Identity = 207/219 (94.52%), Postives = 212/219 (96.80%), Query Frame = 1


Query: 1   MSSYSDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE 60
           MSSYSDSDDDSVPRSKLFGRRRP++DIFGGGRVADILLWKDKK SAGLLLGMTVLWFLFE
Sbjct: 1   MSSYSDSDDDSVPRSKLFGRRRPIHDIFGGGRVADILLWKDKKMSAGLLLGMTVLWFLFE 60

Query: 61  IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN 120
           +VEYNFVTLICH+SITSMLIFFIWCTGAEFFKWNPPR PEAILKESTFKDVASTLHRRIN
Sbjct: 61  VVEYNFVTLICHISITSMLIFFIWCTGAEFFKWNPPRFPEAILKESTFKDVASTLHRRIN 120

Query: 121 QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE 180
           QF  KIFDIAYGKDLPLFFLAIVSLYLLSVIGSY+SFLNLLYFGFVALETLPFLYEKYEE
Sbjct: 121 QFLIKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYISFLNLLYFGFVALETLPFLYEKYEE 180

Query: 181 EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR 220
           EVDQ AG AI QTKKSYRNFDAKFLNKIPRGPVKDKKLR
Sbjct: 181 EVDQFAGKAISQTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Cucsa.121710 vs. NCBI nr
Match: gi|595845815|ref|XP_007209013.1| (hypothetical protein PRUPE_ppa023407mg [Prunus persica])

HSP 1 Score: 297.4 bits (760), Expect = 2.1e-77
Identity = 135/216 (62.50%), Postives = 178/216 (82.41%), Query Frame = 1


Query: 4   YSDSDDDSVPR---SKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE 63
           YS   DD++     +KLFGR RP++ + GGG+VAD+LLW+++  SA LL+GMTV+WFLFE
Sbjct: 5   YSSDSDDNIGASHGAKLFGRERPIHHVLGGGKVADVLLWRNRNVSAALLIGMTVIWFLFE 64

Query: 64  IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN 123
           +VEYNFVTL+CHLSIT++L+ FIW T AE F+  PP +P+ IL ESTFK++AST+H+R N
Sbjct: 65  VVEYNFVTLVCHLSITTLLVIFIWRTAAELFRLTPPTIPDIILHESTFKELASTVHKRCN 124

Query: 124 QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE 183
            F +K+ D A G+DLP FFLAI+SLY+LSVIG+Y SFLNL+Y GF+ALETLPF+YE++EE
Sbjct: 125 HFLSKLLDSACGRDLPFFFLAIISLYILSVIGTYFSFLNLVYLGFLALETLPFVYERFEE 184

Query: 184 EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDK 217
           +VD+LAG    + K+SYR FD++FLNKIPRGPVK+K
Sbjct: 185 DVDRLAGKVSREIKRSYRKFDSQFLNKIPRGPVKEK 220

[Close]

BLAST of Cucsa.121710 vs. NCBI nr
Match: gi|694319546|ref|XP_009347494.1| (PREDICTED: reticulon-like protein B9 [Pyrus x bretschneideri])

HSP 1 Score: 293.5 bits (750), Expect = 3.1e-76
Identity = 136/216 (62.96%), Postives = 173/216 (80.09%), Query Frame = 1


Query: 5   SDSDDDSVPR-SKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFEIVE 64
           SDSDDD V   +KLFGR RP+Y + GGG+VAD+LLW++   SAGLL+ MTV+WFLFE+VE
Sbjct: 11  SDSDDDGVIHGAKLFGRERPIYHVLGGGKVADVLLWRNINVSAGLLIAMTVIWFLFEVVE 70

Query: 65  YNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRINQFF 124
           YNFVTL+CH+SIT++L+ FIW   AE FK+ PP +P+ IL E+TFK VAST+H+  N F 
Sbjct: 71  YNFVTLLCHISITALLVIFIWRMAAEIFKFPPPMVPQMILHENTFKQVASTVHKGFNHFL 130

Query: 125 TKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVD 184
           +++ D A G+D P FFL I+ LY+LSVIG+Y S LNLLY GF+ LETLPFLYE++EE+VD
Sbjct: 131 SRVLDSACGRDFPFFFLTIICLYILSVIGNYFSILNLLYLGFICLETLPFLYERFEEDVD 190

Query: 185 QLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR 220
           +LAG    + K+SYR FD++FLNKIPRGPVKDKK R
Sbjct: 191 RLAGKISREIKRSYRKFDSQFLNKIPRGPVKDKKNR 226

[Close]

BLAST of Cucsa.121710 vs. NCBI nr
Match: gi|645269943|ref|XP_008240229.1| (PREDICTED: reticulon-like protein B9 [Prunus mume])

HSP 1 Score: 290.4 bits (742), Expect = 2.6e-75
Identity = 134/216 (62.04%), Postives = 174/216 (80.56%), Query Frame = 1


Query: 4   YSDSDDDSVPRS---KLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFE 63
           YS   DD++  S   KLFGR R ++ + GGG+VAD+LLW+++  SA LL+GMTV+WFLFE
Sbjct: 6   YSSDSDDNIGTSLGAKLFGRERSIHHVLGGGKVADVLLWRNRNVSAALLIGMTVIWFLFE 65

Query: 64  IVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRIN 123
           +VEYNFVTL+CHLSIT++L+ FIW T AE F+  PP +P  IL ESTFK++AS +H+R N
Sbjct: 66  VVEYNFVTLVCHLSITTLLVIFIWRTAAELFRLTPPTIPGIILHESTFKEMASIVHKRCN 125

Query: 124 QFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEE 183
           QF +K+ D A G+DLP FFLAI+SLY+LSVIG+Y SFLNL+Y GF+ LETLPFLYE++EE
Sbjct: 126 QFLSKLLDSACGRDLPFFFLAIISLYILSVIGAYFSFLNLVYLGFLGLETLPFLYERFEE 185

Query: 184 EVDQLAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDK 217
           +VD+LAG    + K+SY  FD++FLNKIPRGPVK+K
Sbjct: 186 DVDRLAGKVSREIKRSYGKFDSQFLNKIPRGPVKEK 221

The following BLAST results are available for this feature:

BLAST of Cucsa.121710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTNLI_ARATH	5.8e-67	53.46	Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1	[more]
RTNLB_ARATH	1.9e-49	42.36	Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1	[more]
RTNLA_ARATH	3.9e-47	41.30	Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1	[more]
RTNLC_ARATH	5.6e-46	44.55	Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=2 SV=1	[more]
RTNLE_ARATH	3.6e-45	41.28	Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1	[more]

BLAST of Cucsa.121710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTQ2_CUCSA	9.8e-122	100.00	Reticulon-like protein OS=Cucumis sativus GN=Csa_1G042570 PE=4 SV=1	[more]
M5W8Z9_PRUPE	1.5e-77	62.50	Reticulon-like protein OS=Prunus persica GN=PRUPE_ppa023407mg PE=4 SV=1	[more]
B9I2J5_POPTR	1.6e-71	61.11	Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0012s05030g PE=4 SV=1	[more]
B9IE65_POPTR	3.9e-70	60.00	Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0015s03930g PE=4 SV=1	[more]
V4U109_9ROSI	3.9e-70	57.92	Reticulon-like protein OS=Citrus clementina GN=CICLE_v10022074mg PE=4 SV=1	[more]

BLAST of Cucsa.121710 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18260.1	3.3e-68	53.46	Reticulon family protein	[more]
AT4G11220.1	1.1e-50	42.36	VIRB2-interacting protein 2	[more]
AT4G23630.1	2.2e-48	41.30	VIRB2-interacting protein 1	[more]
AT2G46170.1	2.1e-46	41.28	Reticulon family protein	[more]
AT1G64090.2	2.5e-44	41.53	Reticulan like protein B3	[more]

BLAST of Cucsa.121710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439423\|ref\|XP_004137485.1\|	1.4e-121	100.00	PREDICTED: reticulon-like protein B9 [Cucumis sativus]	[more]
gi\|659066782\|ref\|XP_008461104.1\|	1.1e-115	94.52	PREDICTED: reticulon-like protein B9 [Cucumis melo]	[more]
gi\|595845815\|ref\|XP_007209013.1\|	2.1e-77	62.50	hypothetical protein PRUPE_ppa023407mg [Prunus persica]	[more]
gi\|694319546\|ref\|XP_009347494.1\|	3.1e-76	62.96	PREDICTED: reticulon-like protein B9 [Pyrus x bretschneideri]	[more]
gi\|645269943\|ref\|XP_008240229.1\|	2.6e-75	62.04	PREDICTED: reticulon-like protein B9 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.121710.1	Cucsa.121710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 33..188 score: 1.3
IPR003388	Reticulon	PROFILE	PS50845	RETICULON	coord: 33..219 score: 34
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 3..219 score: 9.3E
None	No IPR available	PANTHER	PTHR10994:SF81	RETICULON-LIKE PROTEIN B15	coord: 3..219 score: 9.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.121710	Cla018479	Watermelon (97103) v1	cgywmB193
Cucsa.121710	Csa1G042570	Cucumber (Chinese Long) v2	cgycuB159
Cucsa.121710	MELO3C002107	Melon (DHL92) v3.5.1	cgymeB185
Cucsa.121710	ClCG04G010930	Watermelon (Charleston Gray)	cgywcgB190
Cucsa.121710	CSPI01G06970	Wild cucumber (PI 183967)	cgycpiB160
Cucsa.121710	CmaCh18G000510	Cucurbita maxima (Rimu)	cgycmaB0318
Cucsa.121710	CmoCh18G000410	Cucurbita moschata (Rifu)	cgycmoB0315
Cucsa.121710	Lsi02G002090	Bottle gourd (USVL1VR-Ls)	cgylsiB181
Cucsa.121710	Cp4.1LG09g11370	Cucurbita pepo (Zucchini)	cgycpeB0306
Cucsa.121710	MELO3C002107.2	Melon (DHL92) v3.6.1	cgymedB182
Cucsa.121710	CsaV3_1G006910	Cucumber (Chinese Long) v3	cgycucB163
Cucsa.121710	Bhi08G001049	Wax gourd	cgywgoB218
Cucsa.121710	Carg22742	Silver-seed gourd	carcgyB0589

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.121710	Cucurbita moschata (Rifu)	cgycmoB0312
Cucsa.121710	Cucurbita moschata (Rifu)	cgycmoB0313
Cucsa.121710	Cucurbita moschata (Rifu)	cgycmoB0314
Cucsa.121710	Wild cucumber (PI 183967)	cgycpiB161
Cucsa.121710	Cucumber (Chinese Long) v2	cgycuB160
Cucsa.121710	Melon (DHL92) v3.5.1	cgymeB186
Cucsa.121710	Watermelon (Charleston Gray)	cgywcgB191
Cucsa.121710	Watermelon (97103) v1	cgywmB194
Cucsa.121710	Cucurbita pepo (Zucchini)	cgycpeB0307
Cucsa.121710	Cucurbita pepo (Zucchini)	cgycpeB0308
Cucsa.121710	Cucurbita pepo (Zucchini)	cgycpeB0309
Cucsa.121710	Bottle gourd (USVL1VR-Ls)	cgylsiB182
Cucsa.121710	Melon (DHL92) v3.6.1	cgymedB183
Cucsa.121710	Silver-seed gourd	carcgyB0452
Cucsa.121710	Silver-seed gourd	carcgyB0670
Cucsa.121710	Silver-seed gourd	carcgyB0898
Cucsa.121710	Cucumber (Chinese Long) v3	cgycucB164
Cucsa.121710	Watermelon (97103) v2	cgywmbB186
Cucsa.121710	Watermelon (97103) v2	cgywmbB187
Cucsa.121710	Cucumber (Gy14) v1	cgycgyB059
Cucsa.121710	Cucurbita maxima (Rimu)	cgycmaB0315
Cucsa.121710	Cucurbita maxima (Rimu)	cgycmaB0316
Cucsa.121710	Cucurbita maxima (Rimu)	cgycmaB0317