Cucsa.121430 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGGATTGGGTGGACAGATGGCCCATGAAGGCAGCACGCGGGAGGGAAGAGGAGGCTCTTTTAGCTCACCTTAAAATGCCTCATTTCACACTCTCTTTTCGTCTCTCTGTTCACAGATTTGGGaGAAAATCAACACACAGAGAAAAGACGgGGGGgAGAGTTTGAGGGTAAGGCTCTGTGTTGTTGGAGAGCCAAGAATTCACAACTGAATCCAACTTCACACACCCCTCAAAGAAAaTTACTCTCTCAAGTCTTCAGTGAGTCCTCTAAAACCCCTTCCGCTTTTGCTTACTTTCTTCCATTAATTTGTATGGTTTTATTTCTTCCTTCCATCTGTTCTGTTTTTTAAGTGTTTTTCGCCATTCATGGTGAATTTCTTCTGTATTTCGTGGGATTTTTTACGTTTCTCTGGTTTTTTtAGTCTATGCTTCTGACCCATTTCGGTTTTTtCTTTATTGTAGAAGAATTTGTTTTCTCTCTTCCTCTGTCGACGTTGGTAAGAAAACTCACAAAAGGGGGTTTAGCGGAGGGATTTATGTCTTCTGAGCCTCATCTGTTTTCTAGAGCTTTGAAGCAGCTCTGGTTTTCTTCTTCGTCTCTGTTTTTTGTACTTCACATGCAATTTGGTTCCTGGCAACAACAAAGTATTCGACCCTTTTTCATGCAATTAAGATCAAATCGGTAAGTGGGTTTTGTTTATTTTGAGAGTTTAATTCCTGAGGCTCCATAATTTTGGACTGATTTATGGGTTTATGAGTGTTTTTTTTTtCAAAAAACCCCTTGTTCTGGTCTTTGTTTCATTTCCTTTTCTTCTTCCTCCTGCAGGTCTTGTTCTGGAGTGAAGGGGTTTCAAGATTCTATCAGATATCATATTCTCTTTTCAATTTTGGTTCATTTTTGTTTCATTGTTTTtGGTTTtCGTTGACATTAAAGATCACCTAAAGCTTCCTCTGCCTTCCATTTCTCTCCCTTTCACCTTCTCAATTTTTCATCCTTTTTCGTAAAACAAGTTTTGCCCTCGTTTCTTTATTCATTATAGTTTGAGGATTTGACCACAAAACGTCCGGATTCTGAAGTTAGTTTTCAATTCGAGATATGTATGGTAAAGAAGAGAAGAAAATGAAGCAACTAAAAGAAGGAAAGTCCATTTCTATGAGGAAAGTTCGTGTACTGTTTCATGATCCTGATGCCACTGACTACTCAAGCGATGAAGATGAACATGTCAGTCAAGGGGCTAAGAAGATTGTTTGGGAGATATCGTTTCCAGGCATTCACCGGAAGCCAACGGAGGTGAGCTCACAGAAAGAAAGGGCTGATGGAGTCAAATTCAGAGCCAAGACTGAAGTAAAAGAAAGCAGTAGAAGAACGCAGAGATCCTCGTCGATGTATAAAGGCGTTCGACGAAGGAAATGGGGGAAATATGCAGCAGAGATTCGCGATCCCTTTCGCGGTAGAAGATTATGGCTCGGTACTTATAACACCGCAGAAGAAGCTGCTGTTGCTTATCAGAGAAAGAAGCATGAGTTTGAAAGTATGCAATCCATGGAGAATTACAGCAGTGAACTAAGTGGAGGGAAATTTGAAGAGAAGAAGATCAAATCACTTGTTGATGACACTGCTGAATCTGAAGAAATTATAGCTATGTTTTCTCATCCTTCACCATCATCTGTACTTGATCTCTGTACTGGAAGTTTAAGCAGCAATGGACTCAAGAATGTAATTGAAGAATTCAAAGTGGATCAAACTAGGGAACATACAATCACCAAAAAGAGTAAGCCTGTGCAAGATGGAGCTGAAAACATGCTGGAATACATCTGTAAAGATGAGCAGCACATTTCCAACATTCTGGAAGAGGCACCGATGTCGTCGATGCGGATGCCAATACCGCCATTAGGTGGTCGGGAAATGGACTTTCAAGTACTTGAAGACAATGCAATGATCTGCAATGATTTCGATCAGTTATCCAACGATATGAACTACATAGACAATTGTACTCTATACAACATTGATAACAGTCTCGGGGCAATCGATCTTCCTCCAATGGACATAGAATTTGACAAAGAGTTTTCTTGGTTCGACGAGACGTTGAGTATATCATGCATGTAAGTTTTGCAGTTAGGAGACAGTTAATAGCAAGTATTAAGAGCAGTAAAAATGAAAAAGAGAAAAGAGATTGTTTTtGGGTGAGTTTGATCTTCAAAATAAAACCATTGTGAGGATGCAATCTGTGATAATGTTTGGTAGAGAGGGGAGAGTGTTCTTGGGTTTTTCTCTGTGCTTTTAGAGCCGTCCAAGATATTTTTTTtGTTCAACTCTCATTTGTACTGCTAAGTGCTAAGTTATATAATTTTTATTATTATGAATGCAAG TTGGGATTGGGTGGACAGATGGCCCATGAAGGCAGCACGCGGGAGGGAAGAGGAGGCTCTTTTAGCTCACCTTAAAATGCCTCATTTCACACTCTCTTTTCGTCTCTCTGTTCACAGATTTGGGAGAAAATCAACACACAGAGAAAAGACGGGGGGGAGAGTTTGAGGGTAAGGCTCTGTGTTGTTGGAGAGCCAAGAATTCACAACTGAATCCAACTTCACACACCCCTCAAAGAAAATTACTCTCTCAAGTCTTCAAAGAATTTGTTTTCTCTCTTCCTCTGTCGACGTTGGTAAGAAAACTCACAAAAGGGGGTTTAGCGGAGGGATTTATGTCTTCTGAGCCTCATCTGTTTTCTAGAGCTTTGAAGCAGCTCTGGTTTTCTTCTTCGTCTCTGTTTTTTGTACTTCACATGCAATTTGGTTCCTGGCAACAACAAAGTATTCGACCCTTTTTCATGCAATTAAGATCAAATCGGTCTTGTTCTGGAGTGAAGGGGTTTCAAGATTCTATCAGATATCATATTCTCTTTTCAATTTTGGTTCATTTTTGTTTCATTGTTTTTGGTTTTCGTTGACATTAAAGATCACCTAAAGCTTCCTCTGCCTTCCATTTCTCTCCCTTTCACCTTCTCAATTTTTCATCCTTTTTCGTAAAACAAGTTTTGCCCTCGTTTCTTTATTCATTATAGTTTGAGGATTTGACCACAAAACGTCCGGATTCTGAAGTTAGTTTTCAATTCGAGATATGTATGGTAAAGAAGAGAAGAAAATGAAGCAACTAAAAGAAGGAAAGTCCATTTCTATGAGGAAAGTTCGTGTACTGTTTCATGATCCTGATGCCACTGACTACTCAAGCGATGAAGATGAACATGTCAGTCAAGGGGCTAAGAAGATTGTTTGGGAGATATCGTTTCCAGGCATTCACCGGAAGCCAACGGAGGTGAGCTCACAGAAAGAAAGGGCTGATGGAGTCAAATTCAGAGCCAAGACTGAAGTAAAAGAAAGCAGTAGAAGAACGCAGAGATCCTCGTCGATGTATAAAGGCGTTCGACGAAGGAAATGGGGGAAATATGCAGCAGAGATTCGCGATCCCTTTCGCGGTAGAAGATTATGGCTCGGTACTTATAACACCGCAGAAGAAGCTGCTGTTGCTTATCAGAGAAAGAAGCATGAGTTTGAAAGTATGCAATCCATGGAGAATTACAGCAGTGAACTAAGTGGAGGGAAATTTGAAGAGAAGAAGATCAAATCACTTGTTGATGACACTGCTGAATCTGAAGAAATTATAGCTATGTTTTCTCATCCTTCACCATCATCTGTACTTGATCTCTGTACTGGAAGTTTAAGCAGCAATGGACTCAAGAATGTAATTGAAGAATTCAAAGTGGATCAAACTAGGGAACATACAATCACCAAAAAGAGTAAGCCTGTGCAAGATGGAGCTGAAAACATGCTGGAATACATCTGTAAAGATGAGCAGCACATTTCCAACATTCTGGAAGAGGCACCGATGTCGTCGATGCGGATGCCAATACCGCCATTAGGTGGTCGGGAAATGGACTTTCAAGTACTTGAAGACAATGCAATGATCTGCAATGATTTCGATCAGTTATCCAACGATATGAACTACATAGACAATTGTACTCTATACAACATTGATAACAGTCTCGGGGCAATCGATCTTCCTCCAATGGACATAGAATTTGACAAAGAGTTTTCTTGGTTCGACGAGACGTTGAGTATATCATGCATGTAAGTTTTGCAGTTAGGAGACAGTTAATAGCAAGTATTAAGAGCAGTAAAAATGAAAAAGAGAAAAGAGATTGTTTTTGGGTGAGTTTGATCTTCAAAATAAAACCATTGTGAGGATGCAATCTGTGATAATGTTTGGTAGAGAGGGGAGAGTGTTCTTGGGTTTTTCTCTGTGCTTTTAGAGCCGTCCAAGATATTTTTTTTGTTCAACTCTCATTTGTACTGCTAAGTGCTAAGttatataatttttattattatGAATGCAAG ATGTATGGTAAAGAAGAGAAGAAAATGAAGCAACTAAAAGAAGGAAAGTCCATTTCTATGAGGAAAGTTCGTGTACTGTTTCATGATCCTGATGCCACTGACTACTCAAGCGATGAAGATGAACATGTCAGTCAAGGGGCTAAGAAGATTGTTTGGGAGATATCGTTTCCAGGCATTCACCGGAAGCCAACGGAGGTGAGCTCACAGAAAGAAAGGGCTGATGGAGTCAAATTCAGAGCCAAGACTGAAGTAAAAGAAAGCAGTAGAAGAACGCAGAGATCCTCGTCGATGTATAAAGGCGTTCGACGAAGGAAATGGGGGAAATATGCAGCAGAGATTCGCGATCCCTTTCGCGGTAGAAGATTATGGCTCGGTACTTATAACACCGCAGAAGAAGCTGCTGTTGCTTATCAGAGAAAGAAGCATGAGTTTGAAAGTATGCAATCCATGGAGAATTACAGCAGTGAACTAAGTGGAGGGAAATTTGAAGAGAAGAAGATCAAATCACTTGTTGATGACACTGCTGAATCTGAAGAAATTATAGCTATGTTTTCTCATCCTTCACCATCATCTGTACTTGATCTCTGTACTGGAAGTTTAAGCAGCAATGGACTCAAGAATGTAATTGAAGAATTCAAAGTGGATCAAACTAGGGAACATACAATCACCAAAAAGAGTAAGCCTGTGCAAGATGGAGCTGAAAACATGCTGGAATACATCTGTAAAGATGAGCAGCACATTTCCAACATTCTGGAAGAGGCACCGATGTCGTCGATGCGGATGCCAATACCGCCATTAGGTGGTCGGGAAATGGACTTTCAAGTACTTGAAGACAATGCAATGATCTGCAATGATTTCGATCAGTTATCCAACGATATGAACTACATAGACAATTGTACTCTATACAACATTGATAACAGTCTCGGGGCAATCGATCTTCCTCCAATGGACATAGAATTTGACAAAGAGTTTTCTTGGTTCGACGAGACGTTGAGTATATCATGCATGTAA MYGKEEKKMKQLKEGKSISMRKVRVLFHDPDATDYSSDEDEHVSQGAKKIVWEISFPGIHRKPTEVSSQKERADGVKFRAKTEVKESSRRTQRSSSMYKGVRRRKWGKYAAEIRDPFRGRRLWLGTYNTAEEAAVAYQRKKHEFESMQSMENYSSELSGGKFEEKKIKSLVDDTAESEEIIAMFSHPSPSSVLDLCTGSLSSNGLKNVIEEFKVDQTREHTITKKSKPVQDGAENMLEYICKDEQHISNILEEAPMSSMRMPIPPLGGREMDFQVLEDNAMICNDFDQLSNDMNYIDNCTLYNIDNSLGAIDLPPMDIEFDKEFSWFDETLSISCM*
BLAST of Cucsa.121430 vs. Swiss-Prot
Match: EF118_ARATH (Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana GN=ERF118 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.8e-20 Identity = 60/134 (44.78%), Postives = 83/134 (61.94%), Query Frame = 1
BLAST of Cucsa.121430 vs. Swiss-Prot
Match: EF119_ARATH (Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana GN=ERF119 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.1e-19 Identity = 63/156 (40.38%), Postives = 88/156 (56.41%), Query Frame = 1
BLAST of Cucsa.121430 vs. Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.0e-19 Identity = 70/198 (35.35%), Postives = 102/198 (51.52%), Query Frame = 1
BLAST of Cucsa.121430 vs. Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.5e-18 Identity = 64/184 (34.78%), Postives = 97/184 (52.72%), Query Frame = 1
BLAST of Cucsa.121430 vs. Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=1 SV=2) HSP 1 Score: 92.8 bits (229), Expect = 7.6e-18 Identity = 64/198 (32.32%), Postives = 103/198 (52.02%), Query Frame = 1
BLAST of Cucsa.121430 vs. TrEMBL
Match: A0A0A0LTN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042290 PE=4 SV=1) HSP 1 Score: 679.5 bits (1752), Expect = 2.1e-192 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 1
BLAST of Cucsa.121430 vs. TrEMBL
Match: W9RJN8_9ROSA (Ethylene-responsive transcription factor OS=Morus notabilis GN=L484_019973 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.8e-48 Identity = 133/348 (38.22%), Postives = 192/348 (55.17%), Query Frame = 1
BLAST of Cucsa.121430 vs. TrEMBL
Match: A5ALC3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015325 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 6.9e-42 Identity = 128/345 (37.10%), Postives = 192/345 (55.65%), Query Frame = 1
BLAST of Cucsa.121430 vs. TrEMBL
Match: V4TWD5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020886mg PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 9.9e-41 Identity = 125/348 (35.92%), Postives = 187/348 (53.74%), Query Frame = 1
BLAST of Cucsa.121430 vs. TrEMBL
Match: A0A067F1R1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035773mg PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.8e-40 Identity = 122/340 (35.88%), Postives = 182/340 (53.53%), Query Frame = 1
BLAST of Cucsa.121430 vs. TAIR10
Match: AT1G68550.1 (AT1G68550.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 100.9 bits (250), Expect = 1.6e-21 Identity = 60/134 (44.78%), Postives = 83/134 (61.94%), Query Frame = 1
BLAST of Cucsa.121430 vs. TAIR10
Match: AT3G25890.1 (AT3G25890.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 99.0 bits (245), Expect = 6.0e-21 Identity = 63/156 (40.38%), Postives = 88/156 (56.41%), Query Frame = 1
BLAST of Cucsa.121430 vs. TAIR10
Match: AT5G53290.1 (AT5G53290.1 cytokinin response factor 3) HSP 1 Score: 97.1 bits (240), Expect = 2.3e-20 Identity = 70/198 (35.35%), Postives = 102/198 (51.52%), Query Frame = 1
BLAST of Cucsa.121430 vs. TAIR10
Match: AT4G27950.1 (AT4G27950.1 cytokinin response factor 4) HSP 1 Score: 92.8 bits (229), Expect = 4.3e-19 Identity = 64/198 (32.32%), Postives = 103/198 (52.02%), Query Frame = 1
BLAST of Cucsa.121430 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2) HSP 1 Score: 92.8 bits (229), Expect = 4.3e-19 Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 1
BLAST of Cucsa.121430 vs. NCBI nr
Match: gi|449439397|ref|XP_004137472.1| (PREDICTED: ethylene-responsive transcription factor CRF3-like [Cucumis sativus]) HSP 1 Score: 679.5 bits (1752), Expect = 3.0e-192 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 1
BLAST of Cucsa.121430 vs. NCBI nr
Match: gi|659066720|ref|XP_008457889.1| (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo]) HSP 1 Score: 431.0 bits (1107), Expect = 1.9e-117 Identity = 215/225 (95.56%), Postives = 219/225 (97.33%), Query Frame = 1
BLAST of Cucsa.121430 vs. NCBI nr
Match: gi|703092900|ref|XP_010094763.1| (Ethylene-responsive transcription factor [Morus notabilis]) HSP 1 Score: 200.3 bits (508), Expect = 5.4e-48 Identity = 133/348 (38.22%), Postives = 192/348 (55.17%), Query Frame = 1
BLAST of Cucsa.121430 vs. NCBI nr
Match: gi|1009131758|ref|XP_015883014.1| (PREDICTED: ethylene-responsive transcription factor CRF1 [Ziziphus jujuba]) HSP 1 Score: 187.2 bits (474), Expect = 4.7e-44 Identity = 136/371 (36.66%), Postives = 199/371 (53.64%), Query Frame = 1
BLAST of Cucsa.121430 vs. NCBI nr
Match: gi|731426368|ref|XP_010663590.1| (PREDICTED: ethylene-responsive transcription factor ERF118 isoform X1 [Vitis vinifera]) HSP 1 Score: 181.8 bits (460), Expect = 2.0e-42 Identity = 129/345 (37.39%), Postives = 193/345 (55.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|