Cucsa.112260 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTCGGTTTATACTATATTGTGTTGTTGAGATCTTTAAGTTCCTTTGGAAATGGAGATGTTAGTGCAAAGGGGTGTCAACCTAGCTGACATGTTCGGGCACCCTGCTGTTCCATAGTTACTTTCAGTTCCTTTTTGTTTTCTATGTATTTTGAGCATTAGTCTCATTTCATTATCCTAACAAAGAGGCTTGTTTCTTGTTAAAAAAATTAAAGATTTGACCAAGATACCCTAATTTACTCTAATCCTACTACGTTATGACCATTTATCTAAGCTTGCTCTTGTCATGGTTTCACTTGAACTGAGTTTGTGTATTCTTTCATATTTGTTAATGTAAATTATATGATGTGTGCTTACAAATAGTCTGACTTGGACATTCTTTTTCCTTCTCTTAACCTTACAGTTATGCCTTGCACCTAAGCTTTGAAGAATCAGTTTTCGGAGGAGAGAAGACAATTCAGTTTTCTTTTTTTGAGACATGTGAAAATTGTGATGGTACGGGTGCTAAATCAAATAGTTGCATAAAATTGTGTGCTAACTGTCATGGAAGAGGAGGAGTAGTCAAAACTCAGAAAACACCATTTGGAATGATGTCTCAGGTATATTTCCTTTCTTTCTTTTTTTTTTGGAAAGGGAAATTTGATTTTGATTGAATTAATGAAATGGGACAAAGTCTCAAACTACATAAAGATAATACAAAAAGTAATCTATTCTATGAATCAAGAAATACTTGGTCAGGATATGTTTAATCTTTTATACATATTATTACCAATTGTAGTAGATGCGAGGGAAGGTAATGAAAAACTGATTTGCAATTGTAACACCCGATTTTTACAACCTTACTCGAACAGGATCTGTTCCATAGGTTGTACATCTGTGTCCTTGAGTTTTAAGGAGTTTGAAGGAGACAAGAACCTAAGTCTGGTGGATGAACCACTAAAAAACACTAGTGCTTTTTTATTTTTAAATGAAACAAAATTTTCACTGATATAATAAAAAGAGCTCAATGCTCAAACTTTTCAGTGTAACGCTAGAACTCAATAATTTACTTCAATCTCTCAATTGGTTTCTTACAAGTTTCACGTGTTCAGATGAATTTTGGTTTTTAGAAAAAAGTACTATGAAAAATCCAACTCTTAGCCTCGTTGATTTACCTTAAGCTCATTGCTCTGTTACATCTTAGGTGTCCATATGTTCTGAATGTGGCGGTGATGGTAAGAAAATAACAAATTTATGTCGAAGCTGTGGTGGCGGTGGTCAACTGCAATCAATTAAAAAAATGAGCTTAGTAATACCACCAGGTGTCAGCGATGGAGCCACGATGAAAATTCAAAGAGAGGGTAGTTCTGATATGAAAAGGTTTAGCTATCCCTTCTTTTCTTACCCTTTTTATAGATTACAAATTTGAAGGTGCTGTTTGGTTTGACAAGTAATGATAACAATCTAATAATCACTTTATTCTTATAGCAATGGTAAAAGAGTAGCAGCAATTACTTTCTTTTTAATATTTGCGAGTGTCTGAATGACAAATTGAGGTAAGTTCTCTCTCCTCTCTCCCCTCTCTTTCCTCTCTCCTCTCACCCACCCTCTTCTCCCTCAACTCCGGCCACGGCTTTCCGGTCACGACTCCTCTCATCTCACTAAGCGGTCATGTCGTCTCCCCTCTCTTCGGCAACATCAAACTTGGGGAGTCAAAAAATGGAAGTTAAAAGCTGCAAGATCGTAAACTCTTTCTACTGTATCTGGTTCGAAAAGGGGAGGTTCCTGTAAGGACCCTAGATAGAAAAATAGTGGATTATTAGGAGAAAATGAAAATGGTTGTTAGTAAGGTCATATTAGTAAATAGATGGTAAGTTGGTTAGGTCTTTTTGTTATAAACAGTGGGAGAGGAGTTGGGGAGAGGTGTGAAGAATTTTGAGGAAGTTTTCCTTGTAAGGGGACCTTGGGAGAGTCTAGCCCTCTCAAAAGGCTAG GTTCGGTTTATACTATATTGTGTTGTTGAGATCTTTAAGTTCCTttggaaatggagatgttacattagtctcatttcattatcctaacaaagaggcttgtttcttTTATGCCTTGCACCTAAGCTTTGAAGAATCAGTTTTCGGAGGAGAGAAGACAATTCAGTTTTCTTTTTTTGAGACATGTGAAAATTGTGATGGTACGGGTGCTAAATCAAATAGTTGCATAAAATTGTGTGCTAACTGTCATGGAAGAGGAGGAGTAGTCAAAACTCAGAAAACACCATTTGGAATGATGTCTCAGGTGTCCATATGTTCTGAATGTGGCGGTGATGGTAAGAAAATAACAAATTTATGTCGAAGCTGTGGTGGCGGTGGTCAACTGCAATCAATTAAAAAAATGAGCTTAGTAATACCACCAGGTGTCAGCGATGGAGCCACGATGAAAATTCAAAGAGAGGtgggagaggagttggggagaggtgtgaagaattttgaggaagttttccttgtaaggggaccttgggagagtctagccctctcaaaaggctag GTTCGGTTTATACTATATTGTGTTGTTGAGATCTTTAAGTTCCTTTGGAAATGGAGATGTTACATTAGTCTCATTTCATTATCCTAACAAAGAGGCTTGTTTCTTTTATGCCTTGCACCTAAGCTTTGAAGAATCAGTTTTCGGAGGAGAGAAGACAATTCAGTTTTCTTTTTTTGAGACATGTGAAAATTGTGATGGTACGGGTGCTAAATCAAATAGTTGCATAAAATTGTGTGCTAACTGTCATGGAAGAGGAGGAGTAGTCAAAACTCAGAAAACACCATTTGGAATGATGTCTCAGGTGTCCATATGTTCTGAATGTGGCGGTGATGGTAAGAAAATAACAAATTTATGTCGAAGCTGTGGTGGCGGTGGTCAACTGCAATCAATTAAAAAAATGAGCTTAGTAATACCACCAGGTGTCAGCGATGGAGCCACGATGAAAATTCAAAGAGAGGTGGGAGAGGAGTTGGGGAGAGGTGTGAAGAATTTTGAGGAAGTTTTCCTTGTAAGGGGACCTTGGGAGAGTCTAGCCCTCTCAAAAGGCTAG FGLYYIVLLRSLSSFGNGDVTLVSFHYPNKEACFFYALHLSFEESVFGGEKTIQFSFFETCENCDGTGAKSNSCIKLCANCHGRGGVVKTQKTPFGMMSQVSICSECGGDGKKITNLCRSCGGGGQLQSIKKMSLVIPPGVSDGATMKIQREVGEELGRGVKNFEEVFLVRGPWESLALSKG*
BLAST of Cucsa.112260 vs. Swiss-Prot
Match: DNAJ_SYNP2 (Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 6.4e-27 Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 1
BLAST of Cucsa.112260 vs. Swiss-Prot
Match: DNAJ1_SYNY3 (Chaperone protein DnaJ 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dnaJ1 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 4.1e-26 Identity = 55/133 (41.35%), Postives = 79/133 (59.40%), Query Frame = 1
BLAST of Cucsa.112260 vs. Swiss-Prot
Match: DNAJ_CYAP7 (Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25 Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 1
BLAST of Cucsa.112260 vs. Swiss-Prot
Match: DNAJ_CYAP4 (Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.7e-25 Identity = 54/140 (38.57%), Postives = 80/140 (57.14%), Query Frame = 1
BLAST of Cucsa.112260 vs. Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2) HSP 1 Score: 115.5 bits (288), Expect = 5.9e-25 Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 1
BLAST of Cucsa.112260 vs. TrEMBL
Match: A0A0A0LT51_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031710 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 5.0e-63 Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 1
BLAST of Cucsa.112260 vs. TrEMBL
Match: W9QWM5_9ROSA (Chaperone protein DnaJ OS=Morus notabilis GN=L484_019309 PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.4e-41 Identity = 79/126 (62.70%), Postives = 103/126 (81.75%), Query Frame = 1
BLAST of Cucsa.112260 vs. TrEMBL
Match: B9IEF5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04950g PE=3 SV=2) HSP 1 Score: 175.6 bits (444), Expect = 5.4e-41 Identity = 83/149 (55.70%), Postives = 112/149 (75.17%), Query Frame = 1
BLAST of Cucsa.112260 vs. TrEMBL
Match: I1KJ69_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G103600 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 7.0e-41 Identity = 88/153 (57.52%), Postives = 107/153 (69.93%), Query Frame = 1
BLAST of Cucsa.112260 vs. TrEMBL
Match: I1KJ68_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G103600 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 7.0e-41 Identity = 88/153 (57.52%), Postives = 107/153 (69.93%), Query Frame = 1
BLAST of Cucsa.112260 vs. TAIR10
Match: AT3G17830.1 (AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 157.1 bits (396), Expect = 1.0e-38 Identity = 75/140 (53.57%), Postives = 103/140 (73.57%), Query Frame = 1
BLAST of Cucsa.112260 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 128.6 bits (322), Expect = 3.8e-30 Identity = 59/125 (47.20%), Postives = 84/125 (67.20%), Query Frame = 1
BLAST of Cucsa.112260 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein) HSP 1 Score: 105.1 bits (261), Expect = 4.5e-23 Identity = 48/118 (40.68%), Postives = 74/118 (62.71%), Query Frame = 1
BLAST of Cucsa.112260 vs. TAIR10
Match: AT4G39960.1 (AT4G39960.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 104.4 bits (259), Expect = 7.7e-23 Identity = 48/118 (40.68%), Postives = 77/118 (65.25%), Query Frame = 1
BLAST of Cucsa.112260 vs. TAIR10
Match: AT5G48030.1 (AT5G48030.1 gametophytic factor 2) HSP 1 Score: 74.7 bits (182), Expect = 6.6e-14 Identity = 39/119 (32.77%), Postives = 61/119 (51.26%), Query Frame = 1
BLAST of Cucsa.112260 vs. NCBI nr
Match: gi|778656700|ref|XP_011649534.1| (PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63 Identity = 119/126 (94.44%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of Cucsa.112260 vs. NCBI nr
Match: gi|778656703|ref|XP_011649542.1| (PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X3 [Cucumis sativus]) HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63 Identity = 119/126 (94.44%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of Cucsa.112260 vs. NCBI nr
Match: gi|778656697|ref|XP_011649531.1| (PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X1 [Cucumis sativus]) HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63 Identity = 119/126 (94.44%), Postives = 122/126 (96.83%), Query Frame = 1
BLAST of Cucsa.112260 vs. NCBI nr
Match: gi|700208851|gb|KGN63947.1| (hypothetical protein Csa_1G031710 [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 7.2e-63 Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 1
BLAST of Cucsa.112260 vs. NCBI nr
Match: gi|659066224|ref|XP_008440493.1| (PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X2 [Cucumis melo]) HSP 1 Score: 235.0 bits (598), Expect = 1.1e-58 Identity = 112/126 (88.89%), Postives = 116/126 (92.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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