CSPI01G05070 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTGAAGGCAGTGCTGGCAGGTTATTGGTTTTCCAGATTTAAGACAGCTCGCTTTGTTTGCTTCTCTTTGGTCCTCTCTTTCAATGGCTTTTGCTGTTTATTCTAGTAAAGAAAATAACTTAAATTGGTGTTGTTTCCTCTCCATGGAATTCAGACCATGTTATCTGAATTGAGAATCTTGAAGGCTCGGAAGATTTCATTGTAACAGCTGGCCGTGGACCTCTCTTTAGCCTATTATTATTCTCTATGCAATTGTGTTCTAAGCTTGTACTTTGTTTGCTTAGTTTCTGATTTGTTTTTGGTAGAAAGTTCTTATAGGTTCGGTTTATACTATATTGTGTTGTTAAGATCTTTAAGTTCCTTTGGAAATGGAGATGTTAGTGCAAAGGGGTGTCAACCTAGCTGACATGTTCGGGCACCCTGCTGTTCCATAGTTATTTTCAGTTCCTTTTTGTTTTCTATGTATTTTGAGCATTAGTCTCATTTCATTATCCTAACAAAGAGGCTTGTTTCTTGTTAAAAAAATTAAAGATTTGACCAAGATACCCTAATTTACTCTAATCCTACTACGTTATGACCATTTATCTAAGCTTGCTCTTGTCATGGTTTCACTTGAACTGAGTTTGTGTATTCTTTCATATTTGTTAATGTAAATTATATGATGTGTGCTTACAAATAGTCTGACTTGGACATTCTTTTTCCTTCTCTTAACCTTACAGTTATGCCTTGCACCTAAGCTTTGAAGAATCAGTTTTCGGAGGAGAGAAGACAATTCAGTTTTCTTTTTTTGAGACATGTGAAAATTGTGATGGTACGGGTGCTAAATCAAATAGTTGCATAAAATTGTGTGCTAACTGTCATGGAAGAGGAGGAGCGGTCAAAACTCAGAAAACACCATTTGGAATGATGTCTCAGGTATATTTCCTTTCTTTCTTTTTTTTTTGGAAAGGGAAATTTGATTTTGATTGAATTAATGAAATGGGACAAAGTCTCAAACTACATAAAGATAATACAAAAAGTAATCTATTCTATGAATCAAGAAATACTTGGTCAGGATATGTTTAATCTTTTATACATATTATTACCAATTGTAGTAGATGCGAGGGAAGGTAATGAAAAACTGATTTGCGATTGTAACACCCGATTTTTACAACCTTACTTGAACAGGATCTGTTCCGTAGGTTGTACATCTGTGTCCTTGAGTTTTAAGGAGTTTGAAGGAGACAAGAACCCAAGTCTGGTGGATGAACCACTAAAAAACACTAGTGCTTTTTTATTTTTAAATGAAACAAAATTTTCACTGATATAATAAAAAGAGCTCAATGCTCAAACTTTTCAGTGTAACGCTAGAACTCAATAATTTACTTCAATCTCTCAATTGGTTTCTTACAAGTTTCACGTGTTCAGATGAATTTTGGTTTTTAGAAAAAAGTACTATGAAAAATCCAACTCTTAGCCTCGTTGATTTACCTTAAGCTCATTGCTCTGTTACATCTTAGGTGTCCATATGTTCTGAATGTGGCGGTGATGGTAAGAAAATAACAAATTTATGTCGAAGCTGTGGTGGCGGTGGTCAACTGCAATCAATTAAAAAAATGAGCTTAGTAATACCACCAGGTGTCAGCGATGGAACCACGATGAAAATTCAAAGAGAGGGTAGTTCTGATATGAAAAGGTTTAGCTATCCCTTCTTTTCTTACCCTTTTTATAGATTACAAATTTGAAGGTGCTGTTTGGTTTGACAAGTAATGATAACAATCTAATAATCACTTTATTCTTATAGCAATGGTAAAAGAGTAGCAACAATTACTTTCTTTTTAATATTTGCGAGTGTCTGAATGACAAATTGAGGTAAGTTCTCTCTCTTCTCTCTCCTCTCTCCCCTCTCCCCTCTCTTTCCTCTCTCCTCTCACCCACCCTCTTCTCCCTCAACTCCGGCCACGGCTTTCGGGTCACGACTCCTCTCATCTCACTAAGCGGTCATGTCGTCTCCCCTCTCTTCGGCAACATCAAACTTGGGGAGTCAAAAAATGGAAGTTAA ATGAGTTATGCCTTGCACCTAAGCTTTGAAGAATCAGTTTTCGGAGGAGAGAAGACAATTCAGTTTTCTTTTTTTGAGACATGTGAAAATTGTGATGGTACGGGTGCTAAATCAAATAGTTGCATAAAATTGTGTGCTAACTGTCATGGAAGAGGAGGAGCGGTCAAAACTCAGAAAACACCATTTGGAATGATGTCTCAGGTGTCCATATGTTCTGAATGTGGCGGTGATGGTAAGAAAATAACAAATTTATGTCGAAGCTGTGGTGGCGGTGGTCAACTGCAATCAATTAAAAAAATGAGCTTAGTAATACCACCAGGTGTCAGCGATGGAACCACGATGAAAATTCAAAGAGAGGGTAGTTCTGATATGAAAAGCGGTCATGTCGTCTCCCCTCTCTTCGGCAACATCAAACTTGGGGAGTCAAAAAATGGAAGTTAA ATGAGTTATGCCTTGCACCTAAGCTTTGAAGAATCAGTTTTCGGAGGAGAGAAGACAATTCAGTTTTCTTTTTTTGAGACATGTGAAAATTGTGATGGTACGGGTGCTAAATCAAATAGTTGCATAAAATTGTGTGCTAACTGTCATGGAAGAGGAGGAGCGGTCAAAACTCAGAAAACACCATTTGGAATGATGTCTCAGGTGTCCATATGTTCTGAATGTGGCGGTGATGGTAAGAAAATAACAAATTTATGTCGAAGCTGTGGTGGCGGTGGTCAACTGCAATCAATTAAAAAAATGAGCTTAGTAATACCACCAGGTGTCAGCGATGGAACCACGATGAAAATTCAAAGAGAGGGTAGTTCTGATATGAAAAGCGGTCATGTCGTCTCCCCTCTCTTCGGCAACATCAAACTTGGGGAGTCAAAAAATGGAAGTTAA
BLAST of CSPI01G05070 vs. Swiss-Prot
Match: DNAJ_SYNP2 (Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.5e-28 Identity = 54/123 (43.90%), Postives = 77/123 (62.60%), Query Frame = 1
BLAST of CSPI01G05070 vs. Swiss-Prot
Match: DNAJ1_SYNY3 (Chaperone protein DnaJ 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dnaJ1 PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 8.7e-27 Identity = 52/123 (42.28%), Postives = 78/123 (63.41%), Query Frame = 1
BLAST of CSPI01G05070 vs. Swiss-Prot
Match: DNAJ_CYAP7 (Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.9e-26 Identity = 52/121 (42.98%), Postives = 76/121 (62.81%), Query Frame = 1
BLAST of CSPI01G05070 vs. Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2) HSP 1 Score: 119.4 bits (298), Expect = 3.3e-26 Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 1
BLAST of CSPI01G05070 vs. Swiss-Prot
Match: DNAJ_CYAP4 (Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.3e-26 Identity = 52/127 (40.94%), Postives = 76/127 (59.84%), Query Frame = 1
BLAST of CSPI01G05070 vs. TrEMBL
Match: A0A0A0LT51_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031710 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 2.1e-64 Identity = 121/123 (98.37%), Postives = 121/123 (98.37%), Query Frame = 1
BLAST of CSPI01G05070 vs. TrEMBL
Match: W9QWM5_9ROSA (Chaperone protein DnaJ OS=Morus notabilis GN=L484_019309 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 2.5e-41 Identity = 80/127 (62.99%), Postives = 103/127 (81.10%), Query Frame = 1
BLAST of CSPI01G05070 vs. TrEMBL
Match: B9IEF5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04950g PE=3 SV=2) HSP 1 Score: 175.6 bits (444), Expect = 4.3e-41 Identity = 82/141 (58.16%), Postives = 109/141 (77.30%), Query Frame = 1
BLAST of CSPI01G05070 vs. TrEMBL
Match: I1KJ68_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G103600 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 6.3e-40 Identity = 80/123 (65.04%), Postives = 97/123 (78.86%), Query Frame = 1
BLAST of CSPI01G05070 vs. TrEMBL
Match: A0A0B2SEV8_GLYSO (Chaperone protein DnaJ OS=Glycine soja GN=glysoja_041937 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 6.3e-40 Identity = 80/123 (65.04%), Postives = 97/123 (78.86%), Query Frame = 1
BLAST of CSPI01G05070 vs. TAIR10
Match: AT3G17830.1 (AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 157.5 bits (397), Expect = 6.2e-39 Identity = 72/125 (57.60%), Postives = 98/125 (78.40%), Query Frame = 1
BLAST of CSPI01G05070 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 129.8 bits (325), Expect = 1.4e-30 Identity = 58/127 (45.67%), Postives = 84/127 (66.14%), Query Frame = 1
BLAST of CSPI01G05070 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein) HSP 1 Score: 104.4 bits (259), Expect = 6.2e-23 Identity = 49/125 (39.20%), Postives = 77/125 (61.60%), Query Frame = 1
BLAST of CSPI01G05070 vs. TAIR10
Match: AT4G39960.1 (AT4G39960.1 Molecular chaperone Hsp40/DnaJ family protein) HSP 1 Score: 103.6 bits (257), Expect = 1.1e-22 Identity = 49/125 (39.20%), Postives = 80/125 (64.00%), Query Frame = 1
BLAST of CSPI01G05070 vs. TAIR10
Match: AT5G48030.1 (AT5G48030.1 gametophytic factor 2) HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14 Identity = 44/137 (32.12%), Postives = 69/137 (50.36%), Query Frame = 1
BLAST of CSPI01G05070 vs. NCBI nr
Match: gi|778656700|ref|XP_011649534.1| (PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 256.5 bits (654), Expect = 2.8e-65 Identity = 125/139 (89.93%), Postives = 129/139 (92.81%), Query Frame = 1
BLAST of CSPI01G05070 vs. NCBI nr
Match: gi|778656703|ref|XP_011649542.1| (PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X3 [Cucumis sativus]) HSP 1 Score: 256.5 bits (654), Expect = 2.8e-65 Identity = 125/139 (89.93%), Postives = 129/139 (92.81%), Query Frame = 1
BLAST of CSPI01G05070 vs. NCBI nr
Match: gi|778656697|ref|XP_011649531.1| (PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X1 [Cucumis sativus]) HSP 1 Score: 256.5 bits (654), Expect = 2.8e-65 Identity = 125/139 (89.93%), Postives = 129/139 (92.81%), Query Frame = 1
BLAST of CSPI01G05070 vs. NCBI nr
Match: gi|700208851|gb|KGN63947.1| (hypothetical protein Csa_1G031710 [Cucumis sativus]) HSP 1 Score: 253.1 bits (645), Expect = 3.1e-64 Identity = 121/123 (98.37%), Postives = 121/123 (98.37%), Query Frame = 1
BLAST of CSPI01G05070 vs. NCBI nr
Match: gi|659066224|ref|XP_008440493.1| (PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X2 [Cucumis melo]) HSP 1 Score: 237.7 bits (605), Expect = 1.3e-59 Identity = 116/139 (83.45%), Postives = 122/139 (87.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|