Cucsa.108030 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.108030
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Translational activator gcn1
Location	scaffold00931 : 279668 .. 281579 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTCCAATTTTGCAACGGACTAAATTTCGAAATAATCGCCAGAAAATTTTCCATTAGAAACTGAAGGAAATCGAGATCAACGAATTAGTGACTGTGAGTTTCTCTCTTGTCTTTTTCATTTGAGCCTGTTGTTTCGATTACTGTATGATTCTTTGTTTAATTGAGAAACAGATGAACGGCAAGAAATCGTTGAAAAGTGATTAACAAGATTTtAGGGTTTtGTATGGTCAAAGTTGCAAATGGAAATTTGTTGTCCTTTCTCACGATCTATGCCGTCGACGGATGATGAAATAAGAACCTGGAGAAATTTCATAATGGAAAATTAGGGTTTTTCTATATGTTCTTTTTCAATTTGATTCTCTGTTTTTGAGATGGCTGAAGTATGATCTGAAATTAGGAAAAAAAAaTTCTCACGGATTGAGAGCGAAAGATTAAGAAAAGGGGAAAATGTTAGCCTTAGGCAATCTTCATTCACAATCGAATGTTTTTAGTTCTCTGTAACCTTGAATTGGATTACATTCTTATTTCCGTAGGTTTCATTACTTGAGCATTATGCTTTTATTATAACGGATCAAAATGTAGTAAATAGGCCTTTTGCCTCGATTTCATCGTTTAATTTGCCTACTGGGTTCCATTCGTTCTATTCGCAGGAGAGAATATACATATCTGTACTATCAACAACATGGCAATGACATTTCAAAATGGTGGTCTCGTTCATGATGAGAATCTCGGTGTTCAGTATACTAAAGGTTGGAACTGAAGCTTTTTGTTTGAATCGAAGTTTAGTTCGTTCTTGATCCATTTGAGTATATGGTTTTAAAATTGTAATTTGCATCACAGGATCTGCTGTTACAGGGAAGGCTAATGCGATGAATTCACAAAGAAAAAATGGGCTCAGTGGGCGAAAGCCCCTTGGCGATCTATCAAACTCAAGAAAGCCAGTCATTAACCAATCATCAAAACGGCAGAACACAAAGAATCTCACGTTTATTGATGAAGAAAATGGTGCAGGCAAAACGAAAAACATCCCAAAGGGATCTGAGAAAGTGCAGAAGGGTACTCGAAAAGTGCTTTCCGATATTTCAAACTTTGGAAAGAACATCAATCACAATACCATTTGTGAGGAGCGCTTCCTGCACAACCATCAAGATTGTATTAAAGCACAAAATTGCTTAGGCAAGGATCAATTTCTGAGCATAATTGGACTTGGTATGGTTGTGTCAAGTTTTAACATCTATCATGAAAAACCCACTTCTCTTTGATGTTTCTAAGAATTTTTtGTTTCATATCTTTTGCTTCTTGTTATTTAGATCACTCTAAAGAGTTGAAGATAGCCACCACAATAACGGTTAGTTTTGGTGATATTTCCCGTAGTTCTACAGTTTTTTGGAGCAAAACATAACAACCATTTGGGTTTTTTtCCAGCCTGATAGCCCATTGAAGCTCAAGGAAATGGAGGAATTTGCAGGATTTGATGAATCTCCAAAGAAGTTGTTTCTCTTTGGAAGAAGAGGATTTGAATCATCACCGCCTTGCAAATCCCCAGAATCACCTTCACCTTCATTAGATCACTTTTCTTTCTGGGCGGATAGCAATAGTATCGATTTCACATTGATGAAGACCCCATGAAGCGCACACCTTGGGCTTTGCTTTCATCTGGAAAGATTCGGTAGTGGTGGTATTTTGATTGATATGTAGATTGTAGACTCTATGGATGCTAAAACTAGAAATGTTTTGTTTTTtCGTAGATTTTTAGATGCTTCTCAAAGGCTGTTTTAAATGAAGAAAGAATGTCGGTGTTTCTTTCCTTTCTTTTTTGTGTTTTGATTGAGATGAAGATTTATTATCATCATCATCTCTCTAAGCTTCTTTTTGAAAAGATGATTTTCGAAGATTGTAATGGAGCAGATC

mRNA sequence

ACTTCCAATTTTGCAACGGACTAAATTTCGAAATAATCGCCAGAAAATTTTCCATTAGAAACTGAAGGAAATCGAGATCAACGAATTAGTGACTGAGAGAATATACATATCTGTACTATCAACAACATGGCAATGACATTTCAAAATGGTGGTCTCGTTCATGATGAGAATCTCGGTGTTCAGTATACTAAAGGATCTGCTGTTACAGGGAAGGCTAATGCGATGAATTCACAAAGAAAAAATGGGCTCAGTGGGCGAAAGCCCCTTGGCGATCTATCAAACTCAAGAAAGCCAGTCATTAACCAATCATCAAAACGGCAGAACACAAAGAATCTCACGTTTATTGATGAAGAAAATGGTGCAGGCAAAACGAAAAACATCCCAAAGGGATCTGAGAAAGTGCAGAAGGGTACTCGAAAAGTGCTTTCCGATATTTCAAACTTTGGAAAGAACATCAATCACAATACCATTTGTGAGGAGCGCTTCCTGCACAACCATCAAGATTGTATTAAAGCACAAAATTGCTTAGGCAAGGATCAATTTCTGAGCATAATTGGACTTGATCACTCTAAAGAGTTGAAGATAGCCACCACAATAACGCCTGATAGCCCATTGAAGCTCAAGGAAATGGAGGAATTTGCAGGATTTGATGAATCTCCAAAGAAGTTGTTTCTCTTTGGAAGAAGAGGATTTGAATCATCACCGCCTTGCAAATCCCCAGAATCACCTTCACCTTCATTAGATCACTTTTCTTTCTGGGCGGATAGCAATAGTATCGATTTCACATTGATGAAGACCCCATGAAGCGCACACCTTGGGCTTTGCTTTCATCTGGAAAGATTCGGTAGTGGTGGTATTTTGATTGATATGTAGATTGTAGACTCTATGGATGCTAAAACTAGAAATGTTTTGTTTTTTCGTAGATTTTTAGATGCTTCTCAAAGGCTGTTTTAAATGAAGAAAGAATGTCGGTGTTTCTTTCCTTTCTTTTTTGTGTTTTGATTGAGATGAAGATTTATTATCATCATCATCTCTCTAAGCTTCTTTTTGAAAAGATGATTTTCGAAGATTGTAATGGAGCAGATC

Coding sequence (CDS)

ATGGCAATGACATTTCAAAATGGTGGTCTCGTTCATGATGAGAATCTCGGTGTTCAGTATACTAAAGGATCTGCTGTTACAGGGAAGGCTAATGCGATGAATTCACAAAGAAAAAATGGGCTCAGTGGGCGAAAGCCCCTTGGCGATCTATCAAACTCAAGAAAGCCAGTCATTAACCAATCATCAAAACGGCAGAACACAAAGAATCTCACGTTTATTGATGAAGAAAATGGTGCAGGCAAAACGAAAAACATCCCAAAGGGATCTGAGAAAGTGCAGAAGGGTACTCGAAAAGTGCTTTCCGATATTTCAAACTTTGGAAAGAACATCAATCACAATACCATTTGTGAGGAGCGCTTCCTGCACAACCATCAAGATTGTATTAAAGCACAAAATTGCTTAGGCAAGGATCAATTTCTGAGCATAATTGGACTTGATCACTCTAAAGAGTTGAAGATAGCCACCACAATAACGCCTGATAGCCCATTGAAGCTCAAGGAAATGGAGGAATTTGCAGGATTTGATGAATCTCCAAAGAAGTTGTTTCTCTTTGGAAGAAGAGGATTTGAATCATCACCGCCTTGCAAATCCCCAGAATCACCTTCACCTTCATTAGATCACTTTTCTTTCTGGGCGGATAGCAATAGTATCGATTTCACATTGATGAAGACCCCATGA

Protein sequence

MAMTFQNGGLVHDENLGVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQSSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERFLHNHQDCIKAQNCLGKDQFLSIIGLDHSKELKIATTITPDSPLKLKEMEEFAGFDESPKKLFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP*

Homology

[Close]

BLAST of Cucsa.108030 vs. TrEMBL
Match: A0A0A0L6N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183370 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.2e-106
Identity = 198/225 (88.00%), Postives = 198/225 (88.00%), Query Frame = 1


Query: 1   MAMTFQNGGLVHDENLGVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60
           MAMTFQNGGLVHDENL V                        GRKPLGDLSNSRKPVINQ
Sbjct: 1   MAMTFQNGGLVHDENLSVH-----------------------GRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120
           SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF
Sbjct: 61  SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120

Query: 121 LHNHQDCIKAQNCLGKDQFLSIIGLDHSKELKIATTITPDSPLKLKEMEEFAGFDESPKK 180
           LHNHQDCIKAQNCL KDQFLSIIGLDHSKELKIATTI PDSPLKLKEMEEFAGFDESPKK
Sbjct: 121 LHNHQDCIKAQNCLDKDQFLSIIGLDHSKELKIATTIKPDSPLKLKEMEEFAGFDESPKK 180

Query: 181 LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP 226
           LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP
Sbjct: 181 LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP 202

[Close]

BLAST of Cucsa.108030 vs. TrEMBL
Match: A0A0D2USS5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G137900 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-29
Identity = 99/255 (38.82%), Postives = 133/255 (52.16%), Query Frame = 1


Query: 3   MTFQNGGLVHDENLGVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQSS 62
           M  +   L+ D+NL VQ+       GKAN   + RK    GRKPLGDLSNS  P   Q S
Sbjct: 1   MASRTVSLIQDQNLNVQFN------GKANISKALRKASTGGRKPLGDLSNSVNPTAKQIS 60

Query: 63  KRQNTKNLTFIDEE-------NGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNT- 122
           K++N+K +TF ++E       N + + K++PK SEKVQ   RK LSDISN GK     T 
Sbjct: 61  KKENSKIITFTEKETVAFKLPNDSSRKKSVPKASEKVQASGRKALSDISNSGKPHLQGTS 120

Query: 123 ------------ICEERFLHNHQDCIKAQ-NCLGKDQFLSIIGLD----HS---KELKIA 182
                       I EE FLHNH++CIKAQ   +  ++FL I+GLD    HS   K+  ++
Sbjct: 121 KNQTAKLCIPEDISEEGFLHNHEECIKAQKRAISTNEFLRILGLDDFCKHSASAKQHSLS 180

Query: 183 TTITPDSPLKLKEMEEFAGF---DESPKKLFLFGRRGFESSPPCKSPESPSPSLDHFSFW 226
             + P SP +  +M E       + SP K  L   R  +S P   SPE+P    DH+  W
Sbjct: 181 NKMEPTSPSRYAKMNEITAMLIEELSPPKHKL--SRKLDSCP--ASPEAP----DHYMQW 240

[Close]

BLAST of Cucsa.108030 vs. TrEMBL
Match: A0A0B0PG07_GOSAR (Translational activator gcn1 OS=Gossypium arboreum GN=F383_27362 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 95/248 (38.31%), Postives = 131/248 (52.82%), Query Frame = 1


Query: 10  LVHDENLGVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQSSKRQNTKN 69
           L+ D+NL VQ+       GKAN   + RK    GRKPLGDLSNS  P   Q+SK++++K 
Sbjct: 8   LIQDQNLNVQFN------GKANISKAPRKPSTGGRKPLGDLSNSVNPTAKQTSKKESSKI 67

Query: 70  LTFIDEE-------NGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNT-------- 129
           ++F ++E       N + K K++PK SEKVQ   RK LSDISN GK     T        
Sbjct: 68  ISFTEKETIAFKLPNDSSKKKSVPKASEKVQASGRKALSDISNSGKPHLQGTSKNQTAKL 127

Query: 130 -----ICEERFLHNHQDCIKAQ-NCLGKDQFLSIIGLD-------HSKELKIATTITPDS 189
                I EE FLHNH++CIKAQ   +  ++FL I+GLD        +K+  ++  + P S
Sbjct: 128 CIPEDIAEEGFLHNHEECIKAQKRAISTNEFLRILGLDDFCKRSASAKQHSLSNKMEPTS 187

Query: 190 PLKLKEMEEFAGF---DESPKKLFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSI- 226
           P +  +M E       + SP K  L   R  +S P   SPE+P    DH+  W D   I 
Sbjct: 188 PSRDAKMNEITAMLIEELSPPKHKL--SRKLDSCP--ASPEAP----DHYMQWDDPKYIP 241

[Close]

BLAST of Cucsa.108030 vs. TrEMBL
Match: V4RM00_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005709mg PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-28
Identity = 95/258 (36.82%), Postives = 125/258 (48.45%), Query Frame = 1


Query: 3   MTFQNGGLVHDENLGVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQSS 62
           M  Q GGL+ D+NL       SA  GK+      +K  L GRKPLGDLSNS  P  NQS 
Sbjct: 1   MASQLGGLIRDQNLNAHLNGASAGGGKSTISKVPKKGALGGRKPLGDLSNSVNPTPNQSL 60

Query: 63  KRQNTKNLTFIDEENGAGKT---------KNIPKGSEKVQKGTRKVLSDISNFGKNINH- 122
           K+QN+    F D   GA K+         K+  +  EK+Q   RK LSDISN GK+  H 
Sbjct: 61  KKQNSN--VFSDNVIGASKSKIKIDGSKKKSFSRAPEKLQTSGRKALSDISNSGKSHLHE 120

Query: 123 ------------------NTICEERFLHNHQDCIKAQ-NCLGKDQFLSIIGLD----HSK 182
                             + I EE +LHNHQ+CIKAQ   +  D+ L  +GLD       
Sbjct: 121 APKKNMNPKLSVLTEEDLSAIAEEGYLHNHQECIKAQTKSMDIDELLRTVGLDKGFPKQA 180

Query: 183 ELKIATTITPDSPLKLKEMEEFA--GFDESPKKLFLFGRRGFESSPPCKSPESPSPSLDH 226
           E    + + P SP +  E+EE      D SP K   F     +S P C SP+SP    +H
Sbjct: 181 EPPQLSKVMPASPPRYLELEELPEDQLDLSPWKYDQFS--DLDSPPRCASPKSP----NH 240

[Close]

BLAST of Cucsa.108030 vs. TrEMBL
Match: A0A0D2RDP7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G124800 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.5e-28
Identity = 99/261 (37.93%), Postives = 135/261 (51.72%), Query Frame = 1


Query: 3   MTFQNGGLVHDENLGVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQSS 62
           M  +  GL+ D+N+ V Y  G+++  KAN   + RK G+ GRKPLGDLSNS  P +NQ+S
Sbjct: 6   MASRTVGLIQDQNVNVHYN-GASLLRKANIATAPRKGGIGGRKPLGDLSNSVNPTLNQTS 65

Query: 63  KRQNTKNLTFIDEE-------NGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNT- 122
           K++N+K L+F ++E       + + K K++ K SEKVQ G RK LSDISN GK     T 
Sbjct: 66  KKENSKILSFTEKETSVSKLAHDSSKKKSVSKASEKVQVGGRKALSDISNSGKPRLKETS 125

Query: 123 --------------------ICEERFLHNHQDCIKAQ-NCLGKDQFLSIIGL-DHSK--- 182
                               I +E FLHNH +CIKAQ   +  ++FL I+ L D SK   
Sbjct: 126 KKNQTSKLTILAENPSEPEDIAKEGFLHNHDECIKAQKKAISANEFLRILRLEDFSKPAS 185

Query: 183 ----ELKIATTITPDSPLKLKEMEEFAGFDESPKKLFLFGRRGFESSPPCKSPESPSPSL 226
                +     ++P   L+ KEM E    D SP K  L   +   S+PP     SP P L
Sbjct: 186 AKGIRMPNEMPMSPSRYLEAKEMSELLMEDWSPPKCKL--SKKLNSAPP-----SPEP-L 245

[Close]

BLAST of Cucsa.108030 vs. NCBI nr
Match: gi|449446009|ref|XP_004140764.1| (PREDICTED: uncharacterized protein LOC101213514 [Cucumis sativus])

HSP 1 Score: 453.4 bits (1165), Expect = 2.4e-124
Identity = 222/225 (98.67%), Postives = 222/225 (98.67%), Query Frame = 1


Query: 1   MAMTFQNGGLVHDENLGVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60
           MAMTFQNGGLVHDENL VQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ
Sbjct: 1   MAMTFQNGGLVHDENLSVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120
           SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF
Sbjct: 61  SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120

Query: 121 LHNHQDCIKAQNCLGKDQFLSIIGLDHSKELKIATTITPDSPLKLKEMEEFAGFDESPKK 180
           LHNHQDCIKAQNCL KDQFLSIIGLDHSKELKIATTI PDSPLKLKEMEEFAGFDESPKK
Sbjct: 121 LHNHQDCIKAQNCLDKDQFLSIIGLDHSKELKIATTIKPDSPLKLKEMEEFAGFDESPKK 180

Query: 181 LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP 226
           LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP
Sbjct: 181 LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP 225

[Close]

BLAST of Cucsa.108030 vs. NCBI nr
Match: gi|659110390|ref|XP_008455201.1| (PREDICTED: uncharacterized protein LOC103495422 [Cucumis melo])

HSP 1 Score: 421.0 bits (1081), Expect = 1.3e-114
Identity = 207/226 (91.59%), Postives = 215/226 (95.13%), Query Frame = 1


Query: 1   MAMTFQNGGLVHDENLGVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60
           MAMTFQNGGL+HDENL VQYTKGSAV GKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ
Sbjct: 1   MAMTFQNGGLIHDENLNVQYTKGSAVAGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120
           SSKRQ TKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF
Sbjct: 61  SSKRQTTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120

Query: 121 LHNHQDCIKAQNCLGKDQFLSIIGLDHSKELKIATTITPDSPLKLKEMEEFAGFDESPKK 180
           LHNHQDCIKAQNCL KDQFLSIIGLDHSKELKI+TT  PDSPLKL+EM+EFAGFDESPKK
Sbjct: 121 LHNHQDCIKAQNCLDKDQFLSIIGLDHSKELKISTTKKPDSPLKLEEMDEFAGFDESPKK 180

Query: 181 LFLFGRRGFESSPPCKSPE-SPSPSLDHFSFWADSNSIDFTLMKTP 226
           LFLFGRRGFE S PCKSPE SPSPS+DHFSF  D+NSI+FTL+KTP
Sbjct: 181 LFLFGRRGFEPSSPCKSPESSPSPSIDHFSFLTDTNSIEFTLIKTP 226

[Close]

BLAST of Cucsa.108030 vs. NCBI nr
Match: gi|700202270|gb|KGN57403.1| (hypothetical protein Csa_3G183370 [Cucumis sativus])

HSP 1 Score: 394.0 bits (1011), Expect = 1.7e-106
Identity = 198/225 (88.00%), Postives = 198/225 (88.00%), Query Frame = 1


Query: 1   MAMTFQNGGLVHDENLGVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60
           MAMTFQNGGLVHDENL V                        GRKPLGDLSNSRKPVINQ
Sbjct: 1   MAMTFQNGGLVHDENLSVH-----------------------GRKPLGDLSNSRKPVINQ 60

Query: 61  SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120
           SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF
Sbjct: 61  SSKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNTICEERF 120

Query: 121 LHNHQDCIKAQNCLGKDQFLSIIGLDHSKELKIATTITPDSPLKLKEMEEFAGFDESPKK 180
           LHNHQDCIKAQNCL KDQFLSIIGLDHSKELKIATTI PDSPLKLKEMEEFAGFDESPKK
Sbjct: 121 LHNHQDCIKAQNCLDKDQFLSIIGLDHSKELKIATTIKPDSPLKLKEMEEFAGFDESPKK 180

Query: 181 LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP 226
           LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP
Sbjct: 181 LFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDFTLMKTP 202

[Close]

BLAST of Cucsa.108030 vs. NCBI nr
Match: gi|1009109164|ref|XP_015888669.1| (PREDICTED: uncharacterized protein LOC107423596 [Ziziphus jujuba])

HSP 1 Score: 152.9 bits (385), Expect = 6.6e-34
Identity = 101/248 (40.73%), Postives = 136/248 (54.84%), Query Frame = 1


Query: 3   MTFQNGGLVHDENLGVQYTKGSAVTGKAN-AMNSQRKNGLSGRKPLGDLSNSRKPVINQS 62
           M  + G L+ D+NL ++Y  G++  GKAN  + SQ+K GL GRKPLGDLSNS KP   Q 
Sbjct: 1   MASKIGRLIPDQNLSIRYN-GASAGGKANNVVKSQKKGGLGGRKPLGDLSNSGKPAPTQP 60

Query: 63  SKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGK-NINHNT------ 122
           SK+ N KN  FI+    +   KN  K  +KVQ G+RK LSDISN GK N+   +      
Sbjct: 61  SKKANPKNFAFIEAIQDSSIKKNSFKAFDKVQTGSRKALSDISNSGKPNLQEESKKKQNL 120

Query: 123 ---------------ICEERFLHNHQDCIKAQN-CLGKDQFLSIIGLDHSKELKIATTI- 182
                          I EE FLHNHQ+CIKAQ   +  DQFL+ +GL  SK+      I 
Sbjct: 121 KLGVVEEDFVCPNGGILEEGFLHNHQECIKAQTMTMDVDQFLNTLGLVSSKQFASPRAIP 180

Query: 183 TPDSPLKLKEMEEFAGFDESPKKLFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSI 226
           T  S +++++       +E  + +      G ESSPPCK+P+S + S    S W D  + 
Sbjct: 181 TASSKMEIEKSMWHLELEEMDEDMIEDKYCGKESSPPCKTPKSSNCS----SLWNDYENS 240

[Close]

BLAST of Cucsa.108030 vs. NCBI nr
Match: gi|823249358|ref|XP_012457319.1| (PREDICTED: uncharacterized protein LOC105778206 [Gossypium raimondii])

HSP 1 Score: 136.7 bits (343), Expect = 4.9e-29
Identity = 99/255 (38.82%), Postives = 133/255 (52.16%), Query Frame = 1


Query: 3   MTFQNGGLVHDENLGVQYTKGSAVTGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQSS 62
           M  +   L+ D+NL VQ+       GKAN   + RK    GRKPLGDLSNS  P   Q S
Sbjct: 1   MASRTVSLIQDQNLNVQFN------GKANISKALRKASTGGRKPLGDLSNSVNPTAKQIS 60

Query: 63  KRQNTKNLTFIDEE-------NGAGKTKNIPKGSEKVQKGTRKVLSDISNFGKNINHNT- 122
           K++N+K +TF ++E       N + + K++PK SEKVQ   RK LSDISN GK     T 
Sbjct: 61  KKENSKIITFTEKETVAFKLPNDSSRKKSVPKASEKVQASGRKALSDISNSGKPHLQGTS 120

Query: 123 ------------ICEERFLHNHQDCIKAQ-NCLGKDQFLSIIGLD----HS---KELKIA 182
                       I EE FLHNH++CIKAQ   +  ++FL I+GLD    HS   K+  ++
Sbjct: 121 KNQTAKLCIPEDISEEGFLHNHEECIKAQKRAISTNEFLRILGLDDFCKHSASAKQHSLS 180

Query: 183 TTITPDSPLKLKEMEEFAGF---DESPKKLFLFGRRGFESSPPCKSPESPSPSLDHFSFW 226
             + P SP +  +M E       + SP K  L   R  +S P   SPE+P    DH+  W
Sbjct: 181 NKMEPTSPSRYAKMNEITAMLIEELSPPKHKL--SRKLDSCP--ASPEAP----DHYMQW 240

The following BLAST results are available for this feature:

BLAST of Cucsa.108030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6N1_CUCSA	1.2e-106	88.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183370 PE=4 SV=1	[more]
A0A0D2USS5_GOSRA	3.4e-29	38.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G137900 PE=4 SV=1	[more]
A0A0B0PG07_GOSAR	1.7e-28	38.31	Translational activator gcn1 OS=Gossypium arboreum GN=F383_27362 PE=4 SV=1	[more]
V4RM00_9ROSI	2.2e-28	36.82	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005709mg PE=4 SV=1	[more]
A0A0D2RDP7_GOSRA	6.5e-28	37.93	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G124800 PE=4 SV=1	[more]

BLAST of Cucsa.108030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446009\|ref\|XP_004140764.1\|	2.4e-124	98.67	PREDICTED: uncharacterized protein LOC101213514 [Cucumis sativus]	[more]
gi\|659110390\|ref\|XP_008455201.1\|	1.3e-114	91.59	PREDICTED: uncharacterized protein LOC103495422 [Cucumis melo]	[more]
gi\|700202270\|gb\|KGN57403.1\|	1.7e-106	88.00	hypothetical protein Csa_3G183370 [Cucumis sativus]	[more]
gi\|1009109164\|ref\|XP_015888669.1\|	6.6e-34	40.73	PREDICTED: uncharacterized protein LOC107423596 [Ziziphus jujuba]	[more]
gi\|823249358\|ref\|XP_012457319.1\|	4.9e-29	38.82	PREDICTED: uncharacterized protein LOC105778206 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0007346	regulation of mitotic cell cycle
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.108030.1	Cucsa.108030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35125	FAMILY NOT NAMED	coord: 1..225 score: 5.1
None	No IPR available	PANTHER	PTHR35125:SF2	SUBFAMILY NOT NAMED	coord: 1..225 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.108030	Cla006157	Watermelon (97103) v1	cgywmB152
Cucsa.108030	Csa3G183370	Cucumber (Chinese Long) v2	cgycuB132
Cucsa.108030	ClCG05G008270	Watermelon (Charleston Gray)	cgywcgB152
Cucsa.108030	CSPI03G17170	Wild cucumber (PI 183967)	cgycpiB133
Cucsa.108030	CmoCh18G012900	Cucurbita moschata (Rifu)	cgycmoB0248
Cucsa.108030	Lsi05G012060	Bottle gourd (USVL1VR-Ls)	cgylsiB143
Cucsa.108030	Cp4.1LG09g00760	Cucurbita pepo (Zucchini)	cgycpeB0240
Cucsa.108030	CsaV3_3G017370	Cucumber (Chinese Long) v3	cgycucB137
Cucsa.108030	Cla97C05G090360	Watermelon (97103) v2	cgywmbB147
Cucsa.108030	Bhi01G000933	Wax gourd	cgywgoB170
Cucsa.108030	Carg22120	Silver-seed gourd	carcgyB0828
Cucsa.108030	Carg15117	Silver-seed gourd	carcgyB1105

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.108030	Melon (DHL92) v3.6.1	cgymedB142
Cucsa.108030	Melon (DHL92) v3.6.1	cgymedB145
Cucsa.108030	Silver-seed gourd	carcgyB0794
Cucsa.108030	Cucurbita maxima (Rimu)	cgycmaB0248
Cucsa.108030	Cucurbita maxima (Rimu)	cgycmaB0249
Cucsa.108030	Cucurbita maxima (Rimu)	cgycmaB0251
Cucsa.108030	Cucurbita moschata (Rifu)	cgycmoB0247
Cucsa.108030	Cucurbita moschata (Rifu)	cgycmoB0250
Cucsa.108030	Melon (DHL92) v3.5.1	cgymeB142
Cucsa.108030	Melon (DHL92) v3.5.1	cgymeB145
Cucsa.108030	Cucurbita pepo (Zucchini)	cgycpeB0241
Cucsa.108030	Cucurbita pepo (Zucchini)	cgycpeB0244