Carg22120 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22120
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	neuron navigator 1-like
Location	Cucurbita_argyrosperma_scaffold_229 : 189629 .. 191356 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCGACGAACTAAAAACTCGAAAAAAACTGCTAGAAAATTTTCCAGTAGAAATTTAAGAAAGTCGAGAGGAAGATCAAGGGATTTCTCGCAAGTGGTAGTCGAATCTTCTTAATTGTGAGTTTCTCCCTGAACTCTGCTTACTTGAGGCATTTTTTTTTTCCTTTTACATGGAAATTTCAAATATCAATTTCTCTCGTATGTCGAATCTTTTCTGTTTTCTTTTGATTACTGTATGTTCCCGAGTTTATCTGTGAAACTGATGAACTGCAAGAAATTGACGAGAAGTGCTAAACAAGATTTTAGGGTTTCTTTTCGACGAAGTTTTTCTGTTCCTGTAAATTTATTATTCTTTACTTTACCAATGTCGTCCACGGATGATGAAATGAAATAAAAAAACTTGAGTAATTTCATTAATGTAAATAGGGCTTGTTCTGTATGTACTTTTTTCTTCCTGTGGGAAATCTGATTCTCTGTTTTTGAGATTGCGAAGCGAGGATGAGAATGAAAATCAAGAACAGGTGAAACATTACTCTTAGGCAATCTTCATGCATGATCGGCTGATTTTCATTTCGTAACCTTGAATTATATACCGATTTATATAGGATATTCAATTTGTTTCTCTGTTACTTGAGTCCTTGAGTCCTTGTGCTTTTATTTCAAGGGATCAACATGTAGCATGTAAGCCCTTTGCCTTGATTTCATCGTTAAATTTCATACTCGGTTCGATTCTTCCATTCGCAGGAGATATAATATACATTTCTGCAGCATCAGCAACATGGCAATGACATTGCAAAATGGCGGTGTTCTTCAGGATGAGAATCACAATGTTCACTATAATGGTTGGAGTTAAAGCCTTCTTTGGATCATTCTAAACCTACTTTTGTAATCTTGTTTAACTTTGTTATTTGCATCACAGGACCCTCCGGTGCAGGGAAGGGTAATGCCATGAATTCTCAAAGAAAAAGTGGGGTTAGTGGGCGAAAGCCCCTTGGCGATCTATCAAATTCAAGAAAGCCAGTCTTAAACCAGTCATTAAAATGGCAGAACACAAAGAATCTCACGTTTATTGATGAAGAAAATTGTGTAGGAAAAAAGAAAAACACACTGAAGGGCTCTGAGAGAGTACAGAAGGGTACTCGAAAAGTCCTTTCAGATATTTCAAACTCTGGAAAGCCAAATCTTCAAGAGGCCTCAAAGAAGAAGCAGAACCTGAAGTTGAGCACTGTAAGAGAAGAATTGATCCATCAGGAGCGCTTCCTGCACAATCATCAAGAGTGCATTAAAGCAAGAAAGTGCGCTGTGGAGAAGGATCAATTTCTAAGCATCGTTGGACTTGGTATGGTCATAAATAAAGTCTTGACATCTATCTAGAAAGTCCTTGTTTATTTGTTATTTCTTGTGTTTTTTTTGTTCTTATCTTTTGTTTTTGTTGTCATTTAGATCTCCCCAAGGAGTTGAAGATGGATAGAAAGGTCAGTTTTTGAATCTTTTCCTCCTTAGTTTTGTATAGAGCAAAAACATGACCCAGATGCAATTTTTTGGTTGCAGCCTGATAGTCCATTGAAGCTGAAGGAGATGGCGGAATTGGAGATTTTCGATCAATCTCCGAAGAAGTTGTGTCTGTTTGGAAGGGGAAGGCTTGACTCATCACCGCCTTGCAAGTCCCCAAAATCACCTTCAGTGGATACCTTTTCACTCTGGAAGGACAGTGACAGTATTAATTTC

mRNA sequence

TTTGCGACGAACTAAAAACTCGAAAAAAACTGCTAGAAAATTTTCCAGTAGAAATTTAAGAAAGTCGAGAGGAAGATCAAGGGATTTCTCGCAAGTGGTAGTCGAATCTTCTTAATTGAGATATAATATACATTTCTGCAGCATCAGCAACATGGCAATGACATTGCAAAATGGCGGTGTTCTTCAGGATGAGAATCACAATGTTCACTATAATGGACCCTCCGGTGCAGGGAAGGGTAATGCCATGAATTCTCAAAGAAAAAGTGGGGTTAGTGGGCGAAAGCCCCTTGGCGATCTATCAAATTCAAGAAAGCCAGTCTTAAACCAGTCATTAAAATGGCAGAACACAAAGAATCTCACGTTTATTGATGAAGAAAATTGTGTAGGAAAAAAGAAAAACACACTGAAGGGCTCTGAGAGAGTACAGAAGGGTACTCGAAAAGTCCTTTCAGATATTTCAAACTCTGGAAAGCCAAATCTTCAAGAGGCCTCAAAGAAGAAGCAGAACCTGAAGTTGAGCACTGTAAGAGAAGAATTGATCCATCAGGAGCGCTTCCTGCACAATCATCAAGAGTGCATTAAAGCAAGAAAGTGCGCTGTGGAGAAGGATCAATTTCTAAGCATCGTTGGACTTGATCTCCCCAAGGAGTTGAAGATGGATAGAAAGCCTGATAGTCCATTGAAGCTGAAGGAGATGGCGGAATTGGAGATTTTCGATCAATCTCCGAAGAAGTTGTGTCTGTTTGGAAGGGGAAGGCTTGACTCATCACCGCCTTGCAAGTCCCCAAAATCACCTTCAGTGGATACCTTTTCACTCTGGAAGGACAGTGACAGTATTAATTTC

Coding sequence (CDS)

ATGGCAATGACATTGCAAAATGGCGGTGTTCTTCAGGATGAGAATCACAATGTTCACTATAATGGACCCTCCGGTGCAGGGAAGGGTAATGCCATGAATTCTCAAAGAAAAAGTGGGGTTAGTGGGCGAAAGCCCCTTGGCGATCTATCAAATTCAAGAAAGCCAGTCTTAAACCAGTCATTAAAATGGCAGAACACAAAGAATCTCACGTTTATTGATGAAGAAAATTGTGTAGGAAAAAAGAAAAACACACTGAAGGGCTCTGAGAGAGTACAGAAGGGTACTCGAAAAGTCCTTTCAGATATTTCAAACTCTGGAAAGCCAAATCTTCAAGAGGCCTCAAAGAAGAAGCAGAACCTGAAGTTGAGCACTGTAAGAGAAGAATTGATCCATCAGGAGCGCTTCCTGCACAATCATCAAGAGTGCATTAAAGCAAGAAAGTGCGCTGTGGAGAAGGATCAATTTCTAAGCATCGTTGGACTTGATCTCCCCAAGGAGTTGAAGATGGATAGAAAGCCTGATAGTCCATTGAAGCTGAAGGAGATGGCGGAATTGGAGATTTTCGATCAATCTCCGAAGAAGTTGTGTCTGTTTGGAAGGGGAAGGCTTGACTCATCACCGCCTTGCAAGTCCCCAAAATCACCTTCAGTGGATACCTTTTCACTCTGGAAGGACAGTGACAGTATTAATTTC

Protein sequence

MAMTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQSLKWQNTKNLTFIDEENCVGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQNLKLSTVREELIHQERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELKMDRKPDSPLKLKEMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF

Homology

[Close]

BLAST of Carg22120 vs. NCBI nr
Match: XP_022944930.1 (uncharacterized protein LOC111449317 [Cucurbita moschata])

HSP 1 Score: 453.8 bits (1166), Expect = 3.6e-124
Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MAMTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS 60
           MAMTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS
Sbjct: 1   MAMTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS 60

Query: 61  LKWQNTKNLTFIDEENCVGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQNL 120
           LKWQNTKNLTF+DEENCVGKKKNTLKGSERVQKGTRK LSDISNSGKPNLQEASKKKQNL
Sbjct: 61  LKWQNTKNLTFLDEENCVGKKKNTLKGSERVQKGTRKALSDISNSGKPNLQEASKKKQNL 120

Query: 121 KLSTVREELIHQERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELKMDRKPDSPLKLK 180
           KLSTVREELIHQERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELKMDRKPDSPLKLK
Sbjct: 121 KLSTVREELIHQERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELKMDRKPDSPLKLK 180

Query: 181 EMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF 232
           EMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF
Sbjct: 181 EMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF 231

[Close]

BLAST of Carg22120 vs. NCBI nr
Match: XP_023542015.1 (uncharacterized protein LOC111801991 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.5 bits (1129), Expect = 7.1e-120
Identity = 222/231 (96.10%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAMTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS 60
           MAMTLQNGGVLQDENHNVHYNGPS AGK NAMNSQRKSGVSGRKPLGDLSNSR PVLNQS
Sbjct: 1   MAMTLQNGGVLQDENHNVHYNGPSVAGKANAMNSQRKSGVSGRKPLGDLSNSRTPVLNQS 60

Query: 61  LKWQNTKNLTFIDEENCVGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQNL 120
           LKWQNTKNLTFIDEENCVGKKKN LKGSER+QKGTRKVLSDISNSGKPNLQEASKKKQNL
Sbjct: 61  LKWQNTKNLTFIDEENCVGKKKNILKGSERIQKGTRKVLSDISNSGKPNLQEASKKKQNL 120

Query: 121 KLSTVREELIHQERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELKMDRKPDSPLKLK 180
           KLSTVREELIHQERFLHNHQECIK+R CAVEKDQFLSIVGLDLPKE+KMDRKPDSPLKLK
Sbjct: 121 KLSTVREELIHQERFLHNHQECIKSRNCAVEKDQFLSIVGLDLPKEVKMDRKPDSPLKLK 180

Query: 181 EMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF 232
           EMAELEIFD+SPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF
Sbjct: 181 EMAELEIFDRSPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF 231

[Close]

BLAST of Carg22120 vs. NCBI nr
Match: XP_022968637.1 (uncharacterized protein LOC111467798 [Cucurbita maxima])

HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117
Identity = 224/236 (94.92%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 1   MAMTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS 60
           MAMTLQNGGVLQDENHNVHYNGPS AGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS
Sbjct: 1   MAMTLQNGGVLQDENHNVHYNGPSVAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS 60

Query: 61  LKWQNTKNLTFIDEENCVGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQNL 120
           LKWQNTKNLTFIDEENC GKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQNL
Sbjct: 61  LKWQNTKNLTFIDEENCEGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQNL 120

Query: 121 KLSTVREELIH-----QERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELKMDRKPDS 180
           KLSTVREELIH     +ERFLHNHQECIKARKCAVEKDQFLSIVGLDLPK+LKMDRKPDS
Sbjct: 121 KLSTVREELIHHNSICEERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKKLKMDRKPDS 180

Query: 181 PLKLKEMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF 232
           PLKLKE AE EIFDQSPKKL LFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF
Sbjct: 181 PLKLKETAEWEIFDQSPKKLRLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF 236

[Close]

BLAST of Carg22120 vs. NCBI nr
Match: XP_022984982.1 (protein PATRONUS 1-like [Cucurbita maxima])

HSP 1 Score: 353.2 bits (905), Expect = 6.6e-94
Identity = 188/238 (78.99%), Postives = 203/238 (85.29%), Query Frame = 0


Query: 1   MAMTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS 60
           MAMTLQ+GG+ QDEN NV YNG + AGK NAMNSQRKSG+SGRKPLGDLSNSRKP LNQS
Sbjct: 1   MAMTLQSGGLTQDENLNVRYNGSAVAGKANAMNSQRKSGLSGRKPLGDLSNSRKPDLNQS 60

Query: 61  LKWQNTKNLTFIDEENCVGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQNL 120
            KWQNTKNLTFIDEE   GKKKN LKGSE+VQKGTRKVLSDISNSG PNL EASKKKQ L
Sbjct: 61  SKWQNTKNLTFIDEETGAGKKKNILKGSEKVQKGTRKVLSDISNSGMPNLPEASKKKQKL 120

Query: 121 KLSTVREELIH-----QERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELKMD--RKP 180
           KLSTVREE +H     +ERFLHNHQ+CIK++  A++KDQFLSIVGLDLP EL     RKP
Sbjct: 121 KLSTVREESLHHNAICEERFLHNHQDCIKSQNSAMDKDQFLSIVGLDLPNELMTSTRRKP 180

Query: 181 DSPLKLKEMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF 232
           DSPLKL EMAEL + D+SPKKLCLFGRG   SSPPCKSPKSPSVDTFSLWKD+DSINF
Sbjct: 181 DSPLKLMEMAELAVVDRSPKKLCLFGRGWPASSPPCKSPKSPSVDTFSLWKDTDSINF 238

[Close]

BLAST of Carg22120 vs. NCBI nr
Match: XP_022922922.1 (protein PATRONUS 1-like [Cucurbita moschata])

HSP 1 Score: 351.7 bits (901), Expect = 1.9e-93
Identity = 188/239 (78.66%), Postives = 204/239 (85.36%), Query Frame = 0


Query: 1   MAMTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS 60
           MAMTLQ+GG+ QDEN NV YNG + AGK NAMNSQRKSG+SGRKPLGDLSNSRKP LNQS
Sbjct: 1   MAMTLQSGGLTQDENLNVRYNGSAVAGKANAMNSQRKSGLSGRKPLGDLSNSRKPDLNQS 60

Query: 61  LKWQNTKNLTFIDEENCVGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQNL 120
            KWQNTKNLTFIDEE   GKKKN LKGSE+VQKGTRKVLSDISNSG PNL EASKKKQ L
Sbjct: 61  SKWQNTKNLTFIDEETGAGKKKNILKGSEKVQKGTRKVLSDISNSGMPNLPEASKKKQKL 120

Query: 121 KLSTVREE------LIHQERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELKMD--RK 180
           KLSTVREE       I +ERFLH+HQ+CIK++  A++KDQFLSIVGLDLPKEL     RK
Sbjct: 121 KLSTVREESSLHHNAICEERFLHDHQDCIKSQNSAMDKDQFLSIVGLDLPKELMTSTRRK 180

Query: 181 PDSPLKLKEMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLWKDSDSINF 232
           PDSPLKL EMAEL + D+SPKKLCLFGRG  DSSPPCKSPKSPSVDTFSLWKD+D+INF
Sbjct: 181 PDSPLKLMEMAELAVVDRSPKKLCLFGRGWPDSSPPCKSPKSPSVDTFSLWKDTDNINF 239

[Close]

BLAST of Carg22120 vs. TrEMBL
Match: tr|A0A1S3C1L0|A0A1S3C1L0_CUCME (uncharacterized protein LOC103495422 OS=Cucumis melo OX=3656 GN=LOC103495422 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65
Identity = 149/237 (62.87%), Postives = 172/237 (72.57%), Query Frame = 0


Query: 1   MAMTLQNGGVLQDENHNVHY-NGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQ 60
           MAMT QNGG++ DEN NV Y  G + AGK NAMNSQRK+G+SGRKPLGDLSNSRKPV+NQ
Sbjct: 1   MAMTFQNGGLIHDENLNVQYTKGSAVAGKANAMNSQRKNGLSGRKPLGDLSNSRKPVINQ 60

Query: 61  SLKWQNTKNLTFIDEENCVGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQN 120
           S K Q TKNLTFIDEEN  GK KN  KGSE+VQKGTRKVLSDISN GK            
Sbjct: 61  SSKRQTTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGK------------ 120

Query: 121 LKLSTVREELIHQERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELKMD--RKPDSPL 180
                +    I +ERFLHNHQ+CIKA+ C ++KDQFLSI+GLD  KELK+   +KPDSPL
Sbjct: 121 ----NINHNTICEERFLHNHQDCIKAQNC-LDKDQFLSIIGLDHSKELKISTTKKPDSPL 180

Query: 181 KLKEMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPK---SPSVDTFSLWKDSDSINF 232
           KL+EM E   FD+SPKKL LFGR   + S PCKSP+   SPS+D FS   D++SI F
Sbjct: 181 KLEEMDEFAGFDESPKKLFLFGRRGFEPSSPCKSPESSPSPSIDHFSFLTDTNSIEF 220

[Close]

BLAST of Carg22120 vs. TrEMBL
Match: tr|A0A0A0L6N1|A0A0A0L6N1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183370 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.6e-59
Identity = 140/235 (59.57%), Postives = 159/235 (67.66%), Query Frame = 0


Query: 1   MAMTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQS 60
           MAMT QNGG++ DEN +VH                      GRKPLGDLSNSRKPV+NQS
Sbjct: 1   MAMTFQNGGLVHDENLSVH----------------------GRKPLGDLSNSRKPVINQS 60

Query: 61  LKWQNTKNLTFIDEENCVGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEASKKKQNL 120
            K QNTKNLTFIDEEN  GK KN  KGSE+VQKGTRKVLSDISN GK             
Sbjct: 61  SKRQNTKNLTFIDEENGAGKTKNIPKGSEKVQKGTRKVLSDISNFGK------------- 120

Query: 121 KLSTVREELIHQERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELKMDR--KPDSPLK 180
               +    I +ERFLHNHQ+CIKA+ C ++KDQFLSI+GLD  KELK+    KPDSPLK
Sbjct: 121 ---NINHNTICEERFLHNHQDCIKAQNC-LDKDQFLSIIGLDHSKELKIATTIKPDSPLK 180

Query: 181 LKEMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPK--SPSVDTFSLWKDSDSINF 232
           LKEM E   FD+SPKKL LFGR   +SSPPCKSP+  SPS+D FS W DS+SI+F
Sbjct: 181 LKEMEEFAGFDESPKKLFLFGRRGFESSPPCKSPESPSPSLDHFSFWADSNSIDF 196

[Close]

BLAST of Carg22120 vs. TrEMBL
Match: tr|A0A2N9G5J7|A0A2N9G5J7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22562 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.5e-44
Identity = 123/259 (47.49%), Postives = 161/259 (62.16%), Query Frame = 0


Query: 3   MTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQSLK 62
           M +Q G ++QD+N  VHYNG S  GK N +N++RK  + GRKPLGDLSNS KP LN + +
Sbjct: 1   MAMQTGRLIQDQNSIVHYNGSSVGGKTNVLNAERKGRLGGRKPLGDLSNSGKPALNHAPQ 60

Query: 63  WQNTKNLTFIDE-------ENCVGKKKNTL-KGSERVQKGTRKVLSDISNSGKPNLQEAS 122
            Q +KNLTFIDE        N   KKK+T+ K S +V+ G+RK LSDISNS K +  EAS
Sbjct: 61  KQTSKNLTFIDEVSGASQLRNDTIKKKSTISKASGKVKTGSRKALSDISNSSKSHSHEAS 120

Query: 123 KKKQNLKLSTVREELIH---QERFLHNHQECIKARKCAVEKDQFLSIVGLD--------- 182
           KK  N KLS V EE +H   +ERFLHNHQECIKA+  A++ D+FL  VGLD         
Sbjct: 121 KKNLNQKLSVVAEEALHTIAEERFLHNHQECIKAQTKAIDIDEFLKTVGLDNDLSKCSAS 180

Query: 183 --LPKELKMDRKPDSPLK---LKEMAELEIFDQ-----SPKKLCLFGRGRLDSSPPCKSP 232
              P  L    KP+SP+K   ++EMAE ++ +        + LC     +  S PPCK+P
Sbjct: 181 PCAPPALS-KLKPESPMKYLEMEEMAEQQLIEDDWSSWKHELLC-----KPASPPPCKTP 240

[Close]

BLAST of Carg22120 vs. TrEMBL
Match: tr|A0A2N9EHZ2|A0A2N9EHZ2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2162 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42
Identity = 125/254 (49.21%), Postives = 159/254 (62.60%), Query Frame = 0


Query: 3   MTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQSLK 62
           M +Q G ++QD+N  VHYNG S  GK N +N++RK  + GRKPLGDLSNS KP LN + +
Sbjct: 1   MAMQTGRLIQDQNSIVHYNGSSVGGKTNVLNAERKGRLGGRKPLGDLSNSGKPALNHAPQ 60

Query: 63  WQNTKNLTFIDE-------ENCVGKKKNTL-KGSERVQKGTRKVLSDISNSGKPNLQEAS 122
            Q +KNLTFIDE        N   KKK+T+ K S +V+ G+RK LSDISNS K +  EAS
Sbjct: 61  KQTSKNLTFIDEVSGASQLRNDTIKKKSTISKASGKVKTGSRKALSDISNSSKSHSHEAS 120

Query: 123 KKKQNLKLSTVREELIH---QERFLHNHQECIKARKCAVEKDQFLSIVGLD--------- 182
           KK  N KLS V EE +H   +ERFLHNHQECIKA+  A++ D+FL  VGLD         
Sbjct: 121 KKNLNQKLSVVAEEALHTIAEERFLHNHQECIKAQTKAIDIDEFLKTVGLDNDLSKCSAS 180

Query: 183 --LPKELKMDRKPDSPLK---LKEMAELEIFDQ-SPKKLCLFGRGRLDSSPPCKSPKSPS 231
              P  L    KP+SP+K   ++EMAE  I D  S  K  L  +    +SPPCK+P+S  
Sbjct: 181 PCAPPALS-KLKPESPMKYLEMEEMAEQLIEDDWSSWKHELSCK---PASPPCKTPRSQ- 240

[Close]

BLAST of Carg22120 vs. TrEMBL
Match: tr|A0A2I4DR98|A0A2I4DR98_9ROSI (uncharacterized protein LOC108982688 isoform X2 OS=Juglans regia OX=51240 GN=LOC108982688 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.9e-39
Identity = 116/248 (46.77%), Postives = 143/248 (57.66%), Query Frame = 0


Query: 3   MTLQNGGVLQDENHNVHYNGPSGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPV-LNQSL 62
           M  Q G ++QD+N N  YNG S  GK N + ++RK+G+ GRKPLGDLSNS KP  LNQ+ 
Sbjct: 1   MATQAGSLIQDQNFNARYNGTSVGGKSNVLKAERKAGLGGRKPLGDLSNSGKPAPLNQAT 60

Query: 63  KWQNTKNLTFIDEE-------NCVGKKKNTLKGSERVQKGTRKVLSDISNSGKPNLQEAS 122
           K Q++KNL  IDE+       N   KKK   K  + VQ G RK LSDISNSGK  L EA 
Sbjct: 61  KKQSSKNLALIDEDSGVSKLRNDTNKKKGISKVIKTVQAGNRKALSDISNSGKARLNEAP 120

Query: 123 KKKQNLKLSTVREELIHQ------ERFLHNHQECIKARKCAVEKDQFLSIVGLDLPKELK 182
           KK   +KLS V EE + Q      E+FLHNH EC+KA+  A++ D+FL  VGLD    + 
Sbjct: 121 KKNLKMKLSAVAEEQLPQPNAIADEQFLHNHHECVKAQTKAMDMDEFLKTVGLD---NVS 180

Query: 183 MDRKPDSPLK-----LKEMAELEIFDQSPKKLCLFGRGRLDSSPPCKSPKSPSVDTFSLW 232
              K +SPLK     L+EMAE  I D     +         S PPCK+PK  SV  F+  
Sbjct: 181 SKTKIESPLKKYHLDLEEMAEQVIEDGGSSWMHELLPYNPASPPPCKTPK--SVYHFTFC 240

The following BLAST results are available for this feature:

BLAST of Carg22120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944930.1	3.6e-124	99.13	uncharacterized protein LOC111449317 [Cucurbita moschata]	[more]
XP_023542015.1	7.1e-120	96.10	uncharacterized protein LOC111801991 [Cucurbita pepo subsp. pepo]	[more]
XP_022968637.1	1.1e-117	94.92	uncharacterized protein LOC111467798 [Cucurbita maxima]	[more]
XP_022984982.1	6.6e-94	78.99	protein PATRONUS 1-like [Cucurbita maxima]	[more]
XP_022922922.1	1.9e-93	78.66	protein PATRONUS 1-like [Cucurbita moschata]	[more]

BLAST of Carg22120 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg22120 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22120 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1L0\|A0A1S3C1L0_CUCME	1.5e-65	62.87	uncharacterized protein LOC103495422 OS=Cucumis melo OX=3656 GN=LOC103495422 PE=...	[more]
tr\|A0A0A0L6N1\|A0A0A0L6N1_CUCSA	1.6e-59	59.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183370 PE=4 SV=1	[more]
tr\|A0A2N9G5J7\|A0A2N9G5J7_FAGSY	5.5e-44	47.49	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22562 PE=4 SV=1	[more]
tr\|A0A2N9EHZ2\|A0A2N9EHZ2_FAGSY	1.3e-42	49.21	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2162 PE=4 SV=1	[more]
tr\|A0A2I4DR98\|A0A2I4DR98_9ROSI	6.9e-39	46.77	uncharacterized protein LOC108982688 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007346	regulation of mitotic cell cycle

Vocabulary: **INTERPRO**
Term	Definition
IPR039326	Patronus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007346	regulation of mitotic cell cycle
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22120-RA	Carg22120-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..218
None	No IPR available	PANTHER	PTHR35125:SF2	SUBFAMILY NOT NAMED	coord: 10..231
IPR039326	Protein Patronus	PANTHER	PTHR35125	FAMILY NOT NAMED	coord: 10..231

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22120	Cla006157	Watermelon (97103) v1	carwmB0736
Carg22120	Csa3G183370	Cucumber (Chinese Long) v2	carcuB0754
Carg22120	ClCG05G008270	Watermelon (Charleston Gray)	carwcgB0715
Carg22120	CSPI03G17170	Wild cucumber (PI 183967)	carcpiB0771
Carg22120	Cucsa.108030	Cucumber (Gy14) v1	carcgyB0828
Carg22120	CmoCh18G012900	Cucurbita moschata (Rifu)	carcmoB1003
Carg22120	Lsi05G012060	Bottle gourd (USVL1VR-Ls)	carlsiB675
Carg22120	Cp4.1LG09g00760	Cucurbita pepo (Zucchini)	carcpeB1038
Carg22120	CsGy3G017240	Cucumber (Gy14) v2	carcgybB0733
Carg22120	CsaV3_3G017370	Cucumber (Chinese Long) v3	carcucB0774
Carg22120	Cla97C05G090360	Watermelon (97103) v2	carwmbB0772
Carg22120	Bhi01G000933	Wax gourd	carwgoB0871

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22120	Carg15117	Silver-seed gourd	carcarB594

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22120	Silver-seed gourd	carcarB583
Carg22120	Cucurbita maxima (Rimu)	carcmaB1031
Carg22120	Cucurbita maxima (Rimu)	carcmaB1032
Carg22120	Cucurbita moschata (Rifu)	carcmoB1002
Carg22120	Cucurbita pepo (Zucchini)	carcpeB1039
Carg22120	Melon (DHL92) v3.5.1	carmeB0732
Carg22120	Melon (DHL92) v3.5.1	carmeB0733
Carg22120	Melon (DHL92) v3.6.1	carmedB0743
Carg22120	Melon (DHL92) v3.6.1	carmedB0744
Carg22120	Watermelon (97103) v2	carwmbB0773
Carg22120	Wax gourd	carwgoB0872