Cucsa.107900 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.107900
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCleavage and polyadenylation specificity factor subunit 2
Locationscaffold00931 : 159471 .. 168265 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAGCTTCAGAGAGCTTCGTAGCAATGGGAACCTCTGTTCAGGTGACACCTCTTTGTGGAGTGTACAATGAGAATCCTCTATCCTATTTGGTCTCCGTTGATGACTTCAACTTCCTTATCGACTGTGGTTGGAACGACCACTTCGATCCCGCTCTTCTTCAACCTTTATCCAGGTTCTCTTTCTCAGCATTTTTTCCTAATTTTCTTTGTTTCAGCTCAATTCGTAACTTCCCATGTATCGAAGTTACTGAATGGCATGTGAAAGTTTACTGATACTGGCTACGTAAGGAAATCGGTGATACCTAGCTGTTTTTGCCGGTTTTGAAACGTGTTATGTTACTGAGAAAATCACTGAAATGCTTCATTGTAACTTCTACTTACTTTTGAATTGAATAGTTTTTGTGGATTAGAAGGATAGGAATCAATAGCAACTCATTGGTTTAAAGGGTTCTCTAGGAATGGGCTACATTTTGTTTAATTCTCGTTCTCAATACGTAATTGTGGTATTTCAGGGTGGCATCCACGATTGATGCAGTTTTGATATCACATCCTGATACACTTCACCTAGGGGCCCTTCCTTATGCCATGAAACAACTTGGACTTTCTGCTCCAGTTTTTTCCACTGAACCCGTGTACCGATTGGGTCTCCTTACAATGTATGACCAGTTCATCGCAAGGAAGGTAAAGCTTTTCCGTGTAATTTGGTTCTTAATGTATTAACTAACCAAATCAAAACAAGCCACTACTTACTGAACTTTAAATAAGTACTTACCCTCAAGTTTCTTTAGTATTCAAGGACAAGTTGTACGACCTATAGAATATATCTTGCTCTAATAAGCTTGGAGTGCGGTAAAGGAAGGAGTCCTTTTTTAGCTTTGAGAGTGTGGCAGACTCCTACAATTATATGAGTGATGAGTGACCTTGCAAGTTTTTGTTAGTTTAAGTATTATATTTATGCAGTAACTTATACAGGTAACTCATCACTTACAAGAATATATGTGGGCTTGCACCCTTGAATTTTTGCTATATGTTATCTTAAAGGATTTTATATTTTCTTTATTGCATGTGGTTGGGTGAGGGTGGGAAATCATTAGCAGATCCAAATTATGTATTTTGTTAGAACATGGATGCTAATTGATTGGCGGATTTATTTTGTTATTCAAGTCAGAACAATAATTTCTACATCACAAATTTACCATGGATTCCTAATTGGTGTTTCATTTACAATAGCTTTTCATTAAATTGGCTCTTCTTAACTGTCTTTGGGTGTTTCCATATGGAAACGTCCCCTTTCCCcTTTGCAGCAAGTGTCAGAGTTTGATCTATTTACACTGGATGATATCGATTCTGCTTTCCAAGTTGTAACCAGACTAACATACTCCCAGAATCATCATCTTTCAGGTGGCTATTCTTGTTCTTGTTTATTGTTCGATCAAAGTTAATCAATCCCTCTTTCTCTTGTTTTCCTAATCATTGTGTAGTGGTGATACTGATGACCCCGCCAGATGTATCTTGGAAAACCATTCAATCATTCTTCTGGGAAGCACAAACATGCCACATGACATGTTACAGCAATTACTGTCCCTTTTCGAGCTTAAAAaAAAAaGAGGAACCACAGGACTGATACATGGCAACTATAAGAGTTAAAATATGTCATCTATAGGAAACTAAAGAAGCCAACGACATGCTTCCAAAGATGCTACATTTTATAAAAAAAaGCTTATTAAAGGATTGGAAAGCCATATAGAAATATTTATCTTTATTCTATAAGAAAAATTGGTATAGAACACGTCCATACCCTTGATATGCTCAAGTGTTTGATATTTGATCTCCTTTATCAACCCCTCCTTTTGTGTACTTTTTCTTTATACTTCAAAGCTTTTGTCTCTTATTCTCATAAATTCTTTTGCTCTCTTATTTTGTTGTATCCTCGTGCTTTAGCTTGTTTGCCTAGTGCCTACAAAGAGCAGGAGGTTGTCGTTGCTACGTGAGCTAGCTTGACGTGTTCCCCTTCGCTTTAAGGGCCGCGCGATGTGGCCTTACGCCGAAACCACACGGCCCATCTCTTTGCTTGAAACGGGCTGGCCTAAAATGAAGCCTATTAGACCCGACACAGAAATTTGTGTTCATGTTCCATTTCCTTCTATGCCCTCACTTGAGTTACAAGCTCACGTGACCAAGTTCGACGTTTGCATAGTGTTTAAAATTAGGGAAATTGTATGGCATTTGAGTTAGGAATTTGCTAGCTTGTCACACTTTTTTCATTTTGCAGATATGGCAAAAGAAAGTCCAATGCACTTGATACACCCTATATACACCCGATGCACCTGATGCACTGATACACACTTGATACACATATTTATATACATAAATGTTGAAAATGACAAAATATTAAAGGATTTTAATTTAATGGAAATTAAGTAAATACTCCTAATGACATTTGGATAAATAAAGCAATGTGACATTTTTGTAAGTTGATCTTTATTAATTTCAGGTAAAAAACATTAAACACTTTTTAGGAAGGGTTTGAGGTAAAGACTGAGTTATTTTAGTCCTAGGTTATTATAGTTAAATTATAATAGTTTGTGTTTAAGGTGTAGATTATTTTAGTTTGGGTTATAATAATATGTGTTTATGGTTTGTATTTTTACAATAAATATATATTTTTCTTCTCCTAATCCTTTAACATAAATTTAAAACTTTTTATCATAAATTCAAATATTTGGTATTTCAAGTGTGTATCATATGTGTACCAAGTTTATATTATGTACATATCACGTGTATCAAGTGTATATTTAATGTGTATCACTTGTATATCAAGTGTATATTTAATGTGTATCACTTGTATATCAAGTGTATCAAATGTTTATTAGAAGGGTTTCAAGTGTATTAAGCTAGAGGTATTTCAAGTCCATCAAGTGTAAATCCCAGGTTTATTAAGTGTATGTTAGCAGTGTGTACTAGTGGTGTATCAAGTGTATTAGGTGGAATTGACCTTTTCTTGTCATTTTTGCAAAATTAAATAAACATGTGCTATGTGCTTAATTTTTTAAACTTATTTTGTCAGACATTAAAGAGGCCTTTAAAATTAAACAATTTATATTTAATATATATATATAAAAGATTTAACAATTGAGTTTGAATGTCCAATTAGTGTTGGGGTGTCAAGCTATCCTACTTTAATACATGGCCCACTACATAAATTGAATTGTTCATTTTCCCTAGTTCATGTAGCGATGTGATACTCTGAATTTTATTCATGAAGAAACCGTCTTTCATCGAGAATAAGTAAAAACATACATGAAGGCAATGTAAGATGTGATACCATGTAAATTGTGGTTAACTATTTTCCCCTCCCTTTTTCTCTTCTCTAATATTTTATCACAGGCAAAGGAGAGGGAATAGTTATTGCACCTCATGTGGCTGGGCATCTATTGGGGGGAACTCTATGGAAGATAACGAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGTGTAGTAAATGTTGTTACATGCACTATCACTTACGTAAAGATTATTCACACAAAAGTTTAATGCACATTACTTATTTAACTTACTTTTAGGCATCTGAATGGAACCATTCTAGAGTCATTTGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAATAATCAGCCTTACAGACGGCAGAAGGACAAAGAATTTGGAGGTATGTAGGATCCTGTCAGAGATTCCATTTCTTGCCTTGTAGCAAAAAAAGTGTATTCTAAAAATCCTTAAGGATGCTTAGTCATTTTTACCAAGAATTATTGATGAAAGCTACCATTTTGATTAACATAGATACTATTCAGAAGACCTTAAGAGCTAATGGAAATGTCTTACTTCCTGTTGATACTGCTGGGCGCGTGCTGGAGCTTATTCAAATTTTGGAATGGGTTAGTTGGGgAAAGaTAAAAaTCCTCTTGTTTTTtCTTCTCTTTTTGGTTTTAGAACTTTTTGGTTGTATTGGTTGAGCAGTAATATTCACTATCTCATTGTGATTATTGCAGTACTGGGAAGAGGAAAGTTTAAATTATCCCATTTTCTTTTTAACTTACGTTGCATCCAGCACAATTGATTATATCAAGAGTTTCCTAGAGTGGATGAGTGATACAATAGCGAAGTCTTTTGAACACACACGGAACAACGCTTTTCTTCTCAAGTAAGTATTCTTTCAAGTGTTGCGTTTTTATCTTTTGATAGGAAACTAATTCATTTAAAAAGAATGGAGTTAGAAACAGGGTGCAGTTACCTTTGATTAAACTATTTCACCCTTGGTAACATGCTCTAGTTACCTTTGATTAAAGAAATTGAAATAATTTGATTAAAGAAATTGAGATAATTTGATTAAAGAAATTGAGATAATTTTAGTGTAGCAGAGTGCCGTGTGAAGTGATACAAATGGAACCTGGAACTCTTACAAGGCTGTTGTTTTAAATCTTGCAGACATGTTACCCTTCTAATCAACAAAAGTGAACTTGATAATGCTCCAGATGGTCCAAAGGTTGATTGCAACAAATTGTTAATTTGCCTAACGTTTACCTCCTTTTGCATGAGGTTTAATTGAGTTGACATCCATGTGCGTTCTCTTATAGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGTTACTCACATGACATTTTTGTTGACTGGGCAATGGATGCCAAAAACCTCGTCCTTTTTTCTGAAAGAGGCCAGGTATTCTTTAGTAACTTTTTTACATGATTAGCACTCCAGACCTCCAGTGACATTTCCTGTTTTGGTTTTCTATTTATCTTCACTCCTTGGATCTCAGTAACTGCTCTCCAAAATTTATTTGTTACCCTTGCATAAATGCCGTTGTCTCCATTTTTAAAATGTCTTCCACAGGACTAGAGTTTCATCTTGATAGAAAATTAAGTAATCTTATTCAGAGTTTCTTTGTTTATTTTCAAGGATATGCCTAATCTTCTTTTGCTTTAATCTTTTAGTAAATGGTTTTTCTAACAATAGTCAGTTACTCGGTGGTAGTCTACTTTAAGTATACTCTTAGTGCCTTGTGCATGTCTTGATCTGACTGCGCTTGGAAATCCAAACATAATTTCTTTtCCCTCCTTTATTTCTTTCTTTTTTCACCTTCTGTATGTACTCGCTGACCTGCATGTTTCTTTTTAACTCTTATAACTTCTACACTTTATTGTGAATGCATAACCCCATCAGTTGGAAAATGTAGTTTGGCACTTTGGCCCGCATGCTTCAAGCTGATCCACCTCCCAAAGCTGTTAAGGTAACTGTGTCTAAGAGAGTCCCTTTGACTGGAGATGAGCTTATTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTTAAGGAGGAACAATCTAAAGCATCTCATGGAGCTGATAATGATACTGGCGATCCAATGATCATCGATGCTAGCAGTAATGTAGCACCAGATGGTATGAATATGATGCTTGATAACTGCAGTTTTCTGGACATGTGAAATTTTTTtCAGTAAGGACGTTATGGACATCCAATCTACTAATGAATTGGAAAATATATTTTAAGTGAAAGTGGGATTTAGTTAATTTGGTTAATGAAATATTTAGCAGAATGTTTCCTCAAACCCTATCATGGATACGTTAGCCATGTTATTACTTTGCCACTCTGATGTTTCAGGTTTCTACTTCGATCTTAAATTTTTTTtGGTTAGTTTTAAATACTAATGGAGAAGATTGAATCCTTTAACATGGTTTAGAAATACTATAGTTATCCCTGAGGCCTATCTATTATGTAGGGTCTATTGGACAACGCCTGGTTTTTTAGTTGAAGGTCTCATTATCTTTTCTTAGTCCTCTGAACATGCATGTAGCATGCCTTTCAGTGACACTGGAAAAGAGTATCCTTGTATTTACTGGAATCGTCAAATGATCTGTGATTTATTATTTGCTTTGAATCAATTTCTATTTTTCTTTCACTTTATTGTAAAATTTCTCTGGATTTCTTCATATTTGGCTAATGGGTGTCTAGTGGTTTAAACTGTGGCAATTCCCCATTCATGCCTATGAAAGTTATTTATTATTGAAATTTTTTTAACGTTTGTTTTAATTTTTAGTGGAATTGGTTGGCTGTCTGGTTGTATCTTGCAGTCGGGAGTTCACATGGAGGTGCATACAGAGACATATTAATTGATGGTTTTGTTCCTCCTTCAACCGGCGTTGCTCCAATGTTTCCCTTTTATGAAAATACCTCTGCGTGGGATGATTTTGGTGAAGTAATCAATCCCGACGATTATGTAATTAAGGATGAAGACATGGACCAAGCAGCAATGCATGTAAGATGATTTGACTAAAATGAAATGTTAAATTGTTGATAGGTTGTGGGTTCATATAGTAAGTCTAATTTAGGATGATTTGTTTTGTTTTGAAAGTAGAAAAGTATAGAAACTAATTTGTTAATTAACATTTGGAATGCAATATCCTTTTCGGGTTGGGTCTTGAGAATTAGATTCTTTTtCTTTTCTTCTCTCATATGGTTGGTTGAGCAGCCTCCTCCTCCTTCTTCCTTGTGTGTGTGTGTGTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAGCAGCCTCcTCCTCCTtCTTCcTtgTGTGTGTGTGTGTGtGGGGGGGGgAGGGGgTGGGCAGGGGGGTCTGTTATTGTTTTTATTGAAGAGAAACCAACATTGAGAGTAACGAAAAATACCAGCAAAAGAACTGTTATCGAATTCACTGGAAACAGCCGTGTAAAAATCAAACTGCATCCATGTAGCCAATTCATACAGTTGGTAGAATTCACAGTCAAATGAACTTTGAATTATATGTCCGTTATTTGTCATTGTGGATGAATTACTTCTTTACAGGCTGGTGGGGACGTTGATGGAAAACTAGACGAAACTGCTGCTAACTTGATTTTAGATATGAAGCCTTCGAAAGTTGTATCTAATGAATTGACAGTAAGTTAATCTCCGGTTAAATATCTGTTAACATTTATATTGGTCGGCCGAAGTCATACAAATGCGTACTTAATGTTACTGTCACCAATATATACAAATATATTGTGATCAATTACTTTTTtCTTGAAATGCTTAATTTTGCTTTCCGTCGATCATCTTTCCTTTGATCAATGTGATGATACCATCAAGTTATTTATCTATTGACTGAAGCAATAAATGTTTCTGCAATTTCCCTTTCCAGGTCCAAGTTAAATGCTCATTGCATTACATGGATTTTGAAGGTCGTTCAGATGGGAGATCAATTAAATCAATACTCTCCCACGTTGCTCCATTGAAGCTTGTATGGTGTTTTCTTACAACTGCACTTGTGTTGTGCATGAATAAGCATGTGCCTTTATTACTATAGATTGTAGGAAGAAAGTTTTGTTCATCTAAGCTAAGTTGGTGTGTTCTGAGAATTTTTCTTTGAGTTGATCGGATTTTAAATTTCCTTATCCCATGTACTTGCCATAGTTTTTTGTTGTTTCACCATACATGTTTCTGTTACAACAAAAACCACTTTAATCAACAATTCAACCGGTTGATTTTGCTTAGTTATTTACATTGTTATTTGAAGGTTTTGGTGCATGGAACCGCAGAGGCAACCGAGCATCTTAAACAACATTGCCTTAAAAATGTCTGCCCCCATGTCTATGCCCCTCAAATTGAAGAAACGATTGATGTTACTTCTGATTTGTGTGCGTATAAGGTACAGTCAAGACTCTTCATTTCCTTTTCAGGTTATCATTTCATATACTGAGACTAAAAGATCTCCAATTCTTGAATTTCAGGTACAACTTTCAGAGAAGCTGATGAGTAATGTGCTGTTTAAGAAGGTAAAGTTTTTGGCATCCATGCAAATTTCCTTCCAAAATTAGCTTGTATTTTGTATTTTtGTAAGCAGTCTTCCCTTTGATATCTGACGTAATTTCAAATACAGCTAGGAGATTATGAAATCACTTGGCTCGATGCTGAAGTAGGGAAGACTGAGAATGGAACGTTGTCTTTACTTCCTCTCTCCAAGGCTCCTGCGCCTCATAAATCTGTTCTTGTTGGTGATTTAAAAATGGCCGACTTCAAACAATTTCTTGCCAGCAAGGGAATACAGGTACCTTTGCTTATGGACCCCCTACGAAAGAAAACAAATATCTCCTTTTTAATATGTATATACACTAAAATCTGCAATTTAATAAGAAAAGTGAACGATATTACCGTTCTATATGCATTGCAGGTTGAATTTGCTGGGGGTGCTTTGAGATGTGGCGAGTATGTCACCCTACGCAAGGTTACAGATGCAAGCCAAAAGGTTAGAACTTCTTAGAAAAATGGAGGAAAATAAATAAATAAATTTGAATGTGACTCTTACTATTGCTTATTGAATTTGAACCATGTTTCAGCTTCATGCCACAAACGAAATACATATTTGCTTTGCTTCTAAGCATAAACATTAAACATTGAACATTCAATTTATGCAGGGTGGTGGTTCTGGTACACAGCAAGTTGTCATTGAAGGGCCCTTATGTGAGGATTATTATAAAATTCGGGAACTTTTGTATTCACAATTTTATTTGCTATAA

mRNA sequence

AGAGAGCTTCAGAGAGCTTCGTAGCAATGGGAACCTCTGTTCAGGTGACACCTCTTTGTGGAGTGTACAATGAGAATCCTCTATCCTATTTGGTCTCCGTTGATGACTTCAACTTCCTTATCGACTGTGGTTGGAACGACCACTTCGATCCCGCTCTTCTTCAACCTTTATCCAGGGTGGCATCCACGATTGATGCAGTTTTGATATCACATCCTGATACACTTCACCTAGGGGCCCTTCCTTATGCCATGAAACAACTTGGACTTTCTGCTCCAGTTTTTTCCACTGAACCCGTGTACCGATTGGGTCTCCTTACAATGTATGACCAGTTCATCGCAAGGAAGCAAGTGTCAGAGTTTGATCTATTTACACTGGATGATATCGATTCTGCTTTCCAAGTTGTAACCAGACTAACATACTCCCAGAATCATCATCTTTCAGGCAAAGGAGAGGGAATAGTTATTGCACCTCATGTGGCTGGGCATCTATTGGGGGGAACTCTATGGAAGATAACGAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGCATCTGAATGGAACCATTCTAGAGTCATTTGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAATAATCAGCCTTACAGACGGCAGAAGGACAAAGAATTTGGAGATACTATTCAGAAGACCTTAAGAGCTAATGGAAATGTCTTACTTCCTGTTGATACTGCTGGGCGCGTGCTGGAGCTTATTCAAATTTTGGAATGGTACTGGGAAGAGGAAAGTTTAAATTATCCCATTTTCTTTTTAACTTACGTTGCATCCAGCACAATTGATTATATCAAGAGTTTCCTAGAGTGGATGAGTGATACAATAGCGAAGTCTTTTGAACACACACGGAACAACGCTTTTCTTCTCAAACATGTTACCCTTCTAATCAACAAAAGTGAACTTGATAATGCTCCAGATGGTCCAAAGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGTTACTCACATGACATTTTTGTTGACTGGGCAATGGATGCCAAAAACCTCGTCCTTTTTTCTGAAAGAGGCCAGTTTGGCACTTTGGCCCGCATGCTTCAAGCTGATCCACCTCCCAAAGCTGTTAAGGTAACTGTGTCTAAGAGAGTCCCTTTGACTGGAGATGAGCTTATTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTTAAGGAGGAACAATCTAAAGCATCTCATGGAGCTGATAATGATACTGGCGATCCAATGATCATCGATGCTAGCAGTAATGTAGCACCAGATGTCGGGAGTTCACATGGAGGTGCATACAGAGACATATTAATTGATGGTTTTGTTCCTCCTTCAACCGGCGTTGCTCCAATGTTTCCCTTTTATGAAAATACCTCTGCGTGGGATGATTTTGGTGAAGTAATCAATCCCGACGATTATGTAATTAAGGATGAAGACATGGACCAAGCAGCAATGCATGCTGGTGGGGACGTTGATGGAAAACTAGACGAAACTGCTGCTAACTTGATTTTAGATATGAAGCCTTCGAAAGTTGTATCTAATGAATTGACAGTCCAAGTTAAATGCTCATTGCATTACATGGATTTTGAAGGTCGTTCAGATGGGAGATCAATTAAATCAATACTCTCCCACGTTGCTCCATTGAAGCTTGTTTTGGTGCATGGAACCGCAGAGGCAACCGAGCATCTTAAACAACATTGCCTTAAAAATGTCTGCCCCCATGTCTATGCCCCTCAAATTGAAGAAACGATTGATGTTACTTCTGATTTGTGTGCGTATAAGGTACAACTTTCAGAGAAGCTGATGAGTAATGTGCTGTTTAAGAAGCTAGGAGATTATGAAATCACTTGGCTCGATGCTGAAGTAGGGAAGACTGAGAATGGAACGTTGTCTTTACTTCCTCTCTCCAAGGCTCCTGCGCCTCATAAATCTGTTCTTGTTGGTGATTTAAAAATGGCCGACTTCAAACAATTTCTTGCCAGCAAGGGAATACAGGTTGAATTTGCTGGGGGTGCTTTGAGATGTGGCGAGTATGTCACCCTACGCAAGGTTACAGATGCAAGCCAAAAGGGTGGTGGTTCTGGTACACAGCAAGTTGTCATTGAAGGGCCCTTATGTGAGGATTATTATAAAATTCGGGAACTTTTGTATTCACAATTTTATTTGCTATAA

Coding sequence (CDS)

ATGGGAACCTCTGTTCAGGTGACACCTCTTTGTGGAGTGTACAATGAGAATCCTCTATCCTATTTGGTCTCCGTTGATGACTTCAACTTCCTTATCGACTGTGGTTGGAACGACCACTTCGATCCCGCTCTTCTTCAACCTTTATCCAGGGTGGCATCCACGATTGATGCAGTTTTGATATCACATCCTGATACACTTCACCTAGGGGCCCTTCCTTATGCCATGAAACAACTTGGACTTTCTGCTCCAGTTTTTTCCACTGAACCCGTGTACCGATTGGGTCTCCTTACAATGTATGACCAGTTCATCGCAAGGAAGCAAGTGTCAGAGTTTGATCTATTTACACTGGATGATATCGATTCTGCTTTCCAAGTTGTAACCAGACTAACATACTCCCAGAATCATCATCTTTCAGGCAAAGGAGAGGGAATAGTTATTGCACCTCATGTGGCTGGGCATCTATTGGGGGGAACTCTATGGAAGATAACGAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGCAAGGAAAGGCATCTGAATGGAACCATTCTAGAGTCATTTGTGCGACCTGCTGTATTGATAACTGATGCTTATAATGCTCTAAATAATCAGCCTTACAGACGGCAGAAGGACAAAGAATTTGGAGATACTATTCAGAAGACCTTAAGAGCTAATGGAAATGTCTTACTTCCTGTTGATACTGCTGGGCGCGTGCTGGAGCTTATTCAAATTTTGGAATGGTACTGGGAAGAGGAAAGTTTAAATTATCCCATTTTCTTTTTAACTTACGTTGCATCCAGCACAATTGATTATATCAAGAGTTTCCTAGAGTGGATGAGTGATACAATAGCGAAGTCTTTTGAACACACACGGAACAACGCTTTTCTTCTCAAACATGTTACCCTTCTAATCAACAAAAGTGAACTTGATAATGCTCCAGATGGTCCAAAGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGTTACTCACATGACATTTTTGTTGACTGGGCAATGGATGCCAAAAACCTCGTCCTTTTTTCTGAAAGAGGCCAGTTTGGCACTTTGGCCCGCATGCTTCAAGCTGATCCACCTCCCAAAGCTGTTAAGGTAACTGTGTCTAAGAGAGTCCCTTTGACTGGAGATGAGCTTATTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTTAAGGAGGAACAATCTAAAGCATCTCATGGAGCTGATAATGATACTGGCGATCCAATGATCATCGATGCTAGCAGTAATGTAGCACCAGATGTCGGGAGTTCACATGGAGGTGCATACAGAGACATATTAATTGATGGTTTTGTTCCTCCTTCAACCGGCGTTGCTCCAATGTTTCCCTTTTATGAAAATACCTCTGCGTGGGATGATTTTGGTGAAGTAATCAATCCCGACGATTATGTAATTAAGGATGAAGACATGGACCAAGCAGCAATGCATGCTGGTGGGGACGTTGATGGAAAACTAGACGAAACTGCTGCTAACTTGATTTTAGATATGAAGCCTTCGAAAGTTGTATCTAATGAATTGACAGTCCAAGTTAAATGCTCATTGCATTACATGGATTTTGAAGGTCGTTCAGATGGGAGATCAATTAAATCAATACTCTCCCACGTTGCTCCATTGAAGCTTGTTTTGGTGCATGGAACCGCAGAGGCAACCGAGCATCTTAAACAACATTGCCTTAAAAATGTCTGCCCCCATGTCTATGCCCCTCAAATTGAAGAAACGATTGATGTTACTTCTGATTTGTGTGCGTATAAGGTACAACTTTCAGAGAAGCTGATGAGTAATGTGCTGTTTAAGAAGCTAGGAGATTATGAAATCACTTGGCTCGATGCTGAAGTAGGGAAGACTGAGAATGGAACGTTGTCTTTACTTCCTCTCTCCAAGGCTCCTGCGCCTCATAAATCTGTTCTTGTTGGTGATTTAAAAATGGCCGACTTCAAACAATTTCTTGCCAGCAAGGGAATACAGGTTGAATTTGCTGGGGGTGCTTTGAGATGTGGCGAGTATGTCACCCTACGCAAGGTTACAGATGCAAGCCAAAAGGGTGGTGGTTCTGGTACACAGCAAGTTGTCATTGAAGGGCCCTTATGTGAGGATTATTATAAAATTCGGGAACTTTTGTATTCACAATTTTATTTGCTATAA

Protein sequence

MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGADNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL*
Homology
[Close]
BLAST of Cucsa.107900 vs. Swiss-Prot
Match: CPSF2_ARATH (Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thaliana GN=CPSF100 PE=1 SV=2)

HSP 1 Score: 1186.4 bits (3068), Expect = 0.0e+00
Identity = 580/741 (78.27%), Postives = 667/741 (90.01%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+D FNFLIDCGWND FD +LL+PLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLH+GALPYAMKQLGLSAPV++TEPV+RLGLLTMYDQF++RKQVS+FDLFTLDDID
Sbjct: 61  SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ V RLTYSQN+HLSGKGEGIVIAPHVAGH+LGG++W+ITKDGEDVIYAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           RHLNGT+L+SFVRPAVLITDAY+AL  NQ  R+Q+DKEF DTI K L   GNVLLPVDTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAF 300
           GRVLEL+ ILE +W +   ++PI+FLTYV+SSTIDY+KSFLEWMSD+I+KSFE +R+NAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 301 LLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFG 360
           LL+HVTLLINK++LDNAP GPKVVLASMASLEAG++ +IFV+WA D +NLVLF+E GQFG
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 361 TLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNR-KKEEALKASLLKEEQSKASH 420
           TLARMLQ+ PPPK VKVT+SKRVPL G+ELIAYEEEQNR K+EEAL+ASL+KEE++KASH
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 421 GADNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDD 480
           G+D+++ +PMIID  +    DV  SHG AY+DILIDGFVPPS+ VAPMFP+Y+NTS WDD
Sbjct: 421 GSDDNSSEPMIIDTKTT--HDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 480

Query: 481 FGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 540
           FGE+INPDDYVIKDEDMD+ AMH GGDVDG+LDE  A+L+LD +PSKV+SNEL V V CS
Sbjct: 481 FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEET 600
           L  MD+EGRSDGRSIKS+++HV+PLKLVLVH  AEATEHLKQHCL N+CPHVYAPQIEET
Sbjct: 541 LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 600

Query: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHK 660
           +DVTSDLCAYKVQLSEKLMSNV+FKKLGD E+ W+D+EVGKTE    SLLP+  A +PHK
Sbjct: 601 VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHK 660

Query: 661 SVLVGDLKMADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVTDASQKGGGSGTQQVVIE 720
            VLVGDLK+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKV    QKGG SG QQ++IE
Sbjct: 661 PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIE 720

Query: 721 GPLCEDYYKIRELLYSQFYLL 739
           GPLCEDYYKIR+ LYSQFYLL
Sbjct: 721 GPLCEDYYKIRDYLYSQFYLL 739

[Close]
BLAST of Cucsa.107900 vs. Swiss-Prot
Match: CPSF2_ORYSJ (Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp. japonica GN=Os09g0569400 PE=2 SV=1)

HSP 1 Score: 1104.7 bits (2856), Expect = 0.0e+00
Identity = 550/740 (74.32%), Postives = 634/740 (85.68%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPL G Y E PL YL++VD F FL+DCGW D  DP+ LQPL++VA TIDAVL+
Sbjct: 1   MGTSVQVTPLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SH DT+HLGALPYAMK LGLSAPV++TEPV+RLG+LT+YD FI+R+QVS+FDLFTLDDID
Sbjct: 61  SHADTMHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           +AFQ V RL YSQNH L+ KGEGIVIAPHVAGH LGGT+WKITKDGEDV+YAVDFNHRKE
Sbjct: 121 AAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT L SFVRPAVLITDAYNALNN  Y+RQ+D++F D + K L   G+VLLP+DTAG
Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLE++ ILE YW +  L YPI+FLT V++ST+DY+KSFLEWM+D+I+KSFEHTR+NAFL
Sbjct: 241 RVLEILLILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LK VT +INK EL+   D PKVVLASMASLE G+SHDIFVD A +AKNLVLF+E+GQFGT
Sbjct: 301 LKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNR-KKEEALKASLLKEEQSKASHG 420
           LARMLQ DPPPKAVKVT+SKR+PL GDEL AYEEEQ R KKEEALKASL KEE+ KAS G
Sbjct: 361 LARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKKEEALKASLNKEEEKKASLG 420

Query: 421 ADNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDF 480
           ++    DPM+IDAS++  P    S  G   DILIDGFVPPS+ VAPMFPF+ENTS WDDF
Sbjct: 421 SNAKASDPMVIDASTSRKPSNAGSKFGGNVDILIDGFVPPSSSVAPMFPFFENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQAAMHAGGD-VDGKLDETAANLILDMKPSKVVSNELTVQVKCS 540
           GEVINP+DY++K E+MD   M   GD +D  LDE +A L+LD  PSKV+SNE+TVQVKCS
Sbjct: 481 GEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLDEGSARLLLDSTPSKVISNEMTVQVKCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEET 600
           L YMDFEGRSDGRS+KS+++HVAPLKLVLVHG+AEATEHLK HC KN   HVYAPQIEET
Sbjct: 541 LAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSKNSDLHVYAPQIEET 600

Query: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHK 660
           IDVTSDLCAYKVQLSEKLMSNV+ KKLG++EI W+DAEVGKT++  L+LLP S  PA HK
Sbjct: 601 IDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKTDD-KLTLLPPSSTPAAHK 660

Query: 661 SVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEG 720
           SVLVGDLK+ADFKQFLA+KG+QVEFAGGALRCGEY+TLRK+ DA QK G +G+QQ+VIEG
Sbjct: 661 SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITLRKIGDAGQK-GSTGSQQIVIEG 720

Query: 721 PLCEDYYKIRELLYSQFYLL 739
           PLCEDYYKIRELLYSQFYLL
Sbjct: 721 PLCEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Cucsa.107900 vs. Swiss-Prot
Match: CPSF2_DROME (Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila melanogaster GN=Cpsf100 PE=1 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 6.7e-152
Identity = 299/779 (38.38%), Postives = 453/779 (58.15%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++  + G  +E+P  Y++ +DD   L+DCGW++ FD   ++ L R   T+DAVL+
Sbjct: 1   MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPD  HLGALPY + +LGL+ P+++T PV+++G + MYD +++   + +FDLF+LDD+D
Sbjct: 61  SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF+ +T+L Y+Q   L  KG GI I P  AGH++GGT+WKI K G ED++YA DFNH+K
Sbjct: 121 TAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           ERHL+G  L+   RP++LITDAYNA   Q  RR +D++    I +T+R NGNVL+ VDTA
Sbjct: 181 ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEES---LNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRN 300
           GRVLEL  +L+  W+ +    + Y +  L  V+ + I++ KS +EWMSD + K+FE  RN
Sbjct: 241 GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN 300

Query: 301 NAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERG 360
           N F  KH+ L  + +++   P GPKVVLAS   LE+G++ D+FV WA +A N ++ + R 
Sbjct: 301 NPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRT 360

Query: 361 QFGTLA-RMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSK 420
             GTLA  +++   P K +++ V +RV L G EL    EE  R + E L   ++K +  +
Sbjct: 361 SPGTLAMELVENCAPGKQIELDVRRRVDLEGAEL----EEYLRTQGEKLNPLIVKPDVEE 420

Query: 421 ASHGADNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSA 480
            S     D  +  +I    ++       H          GF   +     MFP++E    
Sbjct: 421 ESSSESEDDIEMSVITGKHDIVVRPEGRHH--------SGFFKSNKRHHVMFPYHEEKVK 480

Query: 481 WDDFGEVINPDDYVIKDE----------------DMDQAAMHAGGDVDGKLDETAANLIL 540
            D++GE+IN DDY I D                   ++  + A    +G + +    L+ 
Sbjct: 481 CDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKEEPGIGAEQQANGGIVDNDVQLL- 540

Query: 541 DMKPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLK 600
             KP+K++S   T++V   +  +DFEGRSDG S+  ILS + P +++++HGTAE T+ + 
Sbjct: 541 -EKPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVA 600

Query: 601 QHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGK 660
           +HC +NV   V+ PQ  E IDVTS++  Y+V+L+E L+S + F+K  D E+ W+D  +G 
Sbjct: 601 RHCEQNVGARVFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGM 660

Query: 661 -------------------TENGTLSLLPLSKAPAP-HKSVLVGDLKMADFKQFLASKGI 720
                               E  TL+L  L+    P H SVL+ +LK++DFKQ L    I
Sbjct: 661 RVKAIEAPMDVTVEQDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQTLMRNNI 720

Query: 721 QVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 739
             EF+GG L C       +  DA          +V +EG L E+YYKIRELLY Q+ ++
Sbjct: 721 NSEFSGGVLWCSNGTLALRRVDAG---------KVAMEGCLSEEYYKIRELLYEQYAIV 756

[Close]
BLAST of Cucsa.107900 vs. Swiss-Prot
Match: CPSF2_XENLA (Cleavage and polyadenylation specificity factor subunit 2 OS=Xenopus laevis GN=cpsf2 PE=1 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.0e-139
Identity = 292/796 (36.68%), Postives = 449/796 (56.41%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++T L G   E+ + YL+ VD+F FL+DCGW+++F   ++  + +    +DAVL+
Sbjct: 1   MTSIIKLTTLVGAQEESAVCYLLQVDEFRFLLDCGWDENFSMDIIDSVKKYVHQVDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPD LHLGALPYA+ +LGL+  +++T PVY++G + MYD + +R    +F LF+LDD+D
Sbjct: 61  SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFSLFSLDDVD 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
            AF  + +L Y+Q  HL GKG G+ I P  AGH++GGT+WKI KDG E+++YAVDFNH++
Sbjct: 121 CAFDKIQQLKYNQIVHLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           E HLNG  LE   RP++LITD++NA   QP R+Q+D++    + +TLR +GNVL+ VDTA
Sbjct: 181 EIHLNGCSLEMINRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEESLN---YPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRN 300
           GRVLEL Q+L+  W  +      Y +  L  V+ + +++ KS +EWMSD + + FE  RN
Sbjct: 241 GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN 300

Query: 301 NAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERG 360
           N F  +H+TL    S+L   P  PKVVLAS   LE G+S ++F+ W  D KN V+ + R 
Sbjct: 301 NPFQFRHLTLCHGYSDLARVP-SPKVVLASQPDLECGFSRELFIQWCQDPKNSVILTYRT 360

Query: 361 QFGTLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKA 420
             GTLAR L   P  + + + + KRV L G EL  Y E++  KKE A K    KE    +
Sbjct: 361 TPGTLARFLIDHPSERIIDIELRKRVKLEGKELEEYVEKEKLKKEAAKKLEQSKEADLDS 420

Query: 421 SHGADNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAW 480
           S   D+D  + +    S     D+   + G+ +      F   +    PMFP  E+   W
Sbjct: 421 SD--DSDVEEDIDQITSHKAKHDLMMKNEGSRK----GSFFKQAKKSYPMFPAPEDRIKW 480

Query: 481 DDFGEVINPDDYVIKDEDM--DQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQ 540
           D++GE+I P+D+++ +  +  D+      G  +G  DE     + D+ P+K VS   +++
Sbjct: 481 DEYGEIIKPEDFLVPELQVTEDEKTKLESGLTNG--DEPMDQDLSDV-PTKCVSTTESME 540

Query: 541 VKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCL----KNVCPHV 600
           +K  + Y+D+EGRSDG SIK I++ + P +L++VHG  +AT+ L + C     K++   V
Sbjct: 541 IKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPDATQDLAEACRAFGGKDI--KV 600

Query: 601 YAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITW----LDAEVGKTENGTLS 660
           Y P++ ET+D TS+   Y+V+L + L+S++ F K  D E+ W    LD  V K + G + 
Sbjct: 601 YTPKLHETVDATSETHIYQVRLKDSLVSSLKFCKAKDTELAWIDGVLDMRVSKVDTGVIL 660

Query: 661 LLPLSKAPAPHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCGE-------------- 720
                K       + V D ++ D       K I+  F        E              
Sbjct: 661 EERELKDEGEDMEMQV-DTQVMDASTIAQQKVIKSLFGDDDKEFSEESEIIPTLEPLPSN 720

Query: 721 --------YVTLRKVTDASQ----KG------GG------------SGTQQVVIEGPLCE 739
                   ++   +++D  Q    +G      GG            + T ++ +EG LCE
Sbjct: 721 EVPGHQSVFMNEPRLSDFKQVLLREGIHAEFVGGVLVCNNMVAVRRTETGRIGLEGCLCE 780

[Close]
BLAST of Cucsa.107900 vs. Swiss-Prot
Match: CPSF2_BOVIN (Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus GN=CPSF2 PE=1 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 2.2e-139
Identity = 272/668 (40.72%), Postives = 415/668 (62.13%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++T L GV  E+ L YL+ VD+F FL+DCGW++HF   ++  L +    IDAVL+
Sbjct: 1   MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPD LHLGALPYA+ +LGL+  +++T PVY++G + MYD + +R    +F LFTLDD+D
Sbjct: 61  SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF  + +L +SQ  +L GKG G+ I P  AGH++GGT+WKI KDG E+++YAVDFNH++
Sbjct: 121 AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           E HLNG  LE   RP++LITD++NA   QP R+Q+D++    + +TLR +GNVL+ VDTA
Sbjct: 181 EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEESLN---YPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRN 300
           GRVLEL Q+L+  W  +      Y +  L  V+ + +++ KS +EWMSD + + FE  RN
Sbjct: 241 GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN 300

Query: 301 NAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERG 360
           N F  +H++L    S+L   P  PKVVLAS   LE G+S D+F+ W  D KN ++ + R 
Sbjct: 301 NPFQFRHLSLCHGLSDLARVP-SPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRT 360

Query: 361 QFGTLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKA 420
             GTLAR L  +P  K  ++ + KRV L G EL  Y E++  KKE A K      EQSK 
Sbjct: 361 TPGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYLEKEKLKKEAAKKL-----EQSKE 420

Query: 421 SHGADNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDG-------FVPPSTGVAPMFPF 480
              AD D+ D    DA  ++  D  S+H   + D+++ G       F   +    PMFP 
Sbjct: 421 ---ADIDSSDES--DAEEDI--DQPSAHKTKH-DLMMKGEGSRKGSFFKQAKKSYPMFPA 480

Query: 481 YENTSAWDDFGEVINPDDYVIKD---EDMDQAAMHAG-GDVDGKLDETAANLILDMKPSK 540
            E    WD++GE+I P+D+++ +    + +++ + +G  + D  +D+  +++     P+K
Sbjct: 481 PEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDV-----PTK 540

Query: 541 VVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCL-- 600
            +S   ++++K  + Y+D+EGRSDG SIK I++ + P +L++VHG  EA++ L + C   
Sbjct: 541 CISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAF 600

Query: 601 --KNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITW----LDAEV 646
             K++   VY P++ ET+D TS+   Y+V+L + L+S++ F K  D E+ W    LD  V
Sbjct: 601 GGKDI--KVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRV 647


HSP 2 Score: 71.6 bits (174), Expect = 4.0e-11
Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 1 

Query: 644 TLSLLPLSKAPAPHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDAS 703
           TL  LP  + P  H+SV + + +++DFKQ L  +GIQ EF GG L C   V +R+     
Sbjct: 699 TLEPLPPHEVPG-HQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRR----- 758

Query: 704 QKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 739
                + T ++ +EG LC+D+Y+IR+LLY Q+ ++
Sbjct: 759 -----TETGRIGLEGCLCQDFYRIRDLLYEQYAIV 782

[Close]
BLAST of Cucsa.107900 vs. TrEMBL
Match: A0A0A0LBF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182220 PE=4 SV=1)

HSP 1 Score: 1481.8 bits (3835), Expect = 0.0e+00
Identity = 738/738 (100.00%), Postives = 738/738 (100.00%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420
           LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480
           DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG
Sbjct: 421 DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720
           LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Cucsa.107900 vs. TrEMBL
Match: K7LDR8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G136900 PE=4 SV=1)

HSP 1 Score: 1292.7 bits (3344), Expect = 0.0e+00
Identity = 635/739 (85.93%), Postives = 683/739 (92.42%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+D FNFL+DCGWNDHFDP+ LQPL+RVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SH DTLHLGALPYAMK+LGLSAPV+STEPVYRLGLLTMYDQ+++RKQVSEFDLFTLDDID
Sbjct: 61  SHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ VTRLTYSQNHH SGKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT+L SFVRPAVLITDAYNALNNQPYRRQ DKEFGD ++KTLRA GNVLLPVDT G
Sbjct: 181 RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTVG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELI +LE YW +E+LNYPI+FLTYVASSTIDY+KSFLEWMSDTIAKSFE TR N FL
Sbjct: 241 RVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LK+VTLLINK+ELDNAPDGPKVVLASMASLEAG+SHDIFV+WA D KNLVLF+ERGQF T
Sbjct: 301 LKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420
           LARMLQADPPPKAVKV VSKRVPL G+ELIAYEEEQNR K+EALKASL+KEE+ K SHGA
Sbjct: 361 LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKEALKASLMKEEELKTSHGA 420

Query: 421 DNDTGDPMIIDASSN-VAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDF 480
           DND  DPM+ID+ +N V P+V    GG YRDI IDGFVPPST VAP+FP YENTS WDDF
Sbjct: 421 DNDISDPMVIDSGNNHVPPEVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 540
           GEVINPDDYVIKDEDMDQ AMH G D++GKLDE AA+LILD KPSKVVS+E TVQV+CSL
Sbjct: 481 GEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSL 540

Query: 541 HYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETI 600
            YMDFEGRSDGRSIK+ILSHVAPLKLVLVHG+AEATEHLKQHCLK+VCPHVYAPQIEETI
Sbjct: 541 VYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEETI 600

Query: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKS 660
           DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEI W+DA VGKTEN  LSLLP+S A  PHKS
Sbjct: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGAAPPHKS 660

Query: 661 VLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGP 720
           VLVGDLK+AD KQFL+SKG+QVEFAGGALRCGEYVTLRKV DASQKGGGSG QQ+VIEGP
Sbjct: 661 VLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIEGP 720

Query: 721 LCEDYYKIRELLYSQFYLL 739
           LCEDYYKIR+ LYSQFYLL
Sbjct: 721 LCEDYYKIRDYLYSQFYLL 739

[Close]
BLAST of Cucsa.107900 vs. TrEMBL
Match: V7C4P9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G114000g PE=4 SV=1)

HSP 1 Score: 1284.2 bits (3322), Expect = 0.0e+00
Identity = 629/739 (85.12%), Postives = 684/739 (92.56%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+DDFNFLIDCGWNDHFDP+LLQPLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDDFNFLIDCGWNDHFDPSLLQPLSRVASTIDAVLV 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SH D LHLGALPYAMKQLGLSAPV+STEPVYRLGLLTMYDQ+++RKQVSEFDLFTLDDID
Sbjct: 61  SHADILHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ VTRLTYSQNHHL+GKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQSVTRLTYSQNHHLTGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT L SFVRPAVLITDAYNALNNQPYRRQ DKEFGD ++KTLRA GNVLLPVDTAG
Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELI +LE YW +E+LNYPI+FLTYVASSTIDY+KSFLEWMSD+IAKSFE TR N FL
Sbjct: 241 RVLELILMLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENIFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LK++TLLINK+ELDNAP+GPKVVLASMASLEAG+SHDIFV+WA D KNLVLF+ERGQF T
Sbjct: 301 LKYITLLINKTELDNAPEGPKVVLASMASLEAGFSHDIFVEWANDMKNLVLFTERGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420
           LARMLQADPPPKAVKV VSKRVPL G+ELIAYEEEQNR K+EALKASL+KEE+ K SHG+
Sbjct: 361 LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKEALKASLMKEEELKTSHGS 420

Query: 421 DNDTGDPMIIDASSN-VAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDF 480
           DN+  DPM++D+ +N V P+V    GG YRDI IDGFVPPST VAPMFP YENT  WDDF
Sbjct: 421 DNNNSDPMVVDSGNNHVPPEVAGPRGGGYRDIYIDGFVPPSTSVAPMFPCYENTLEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 540
           GEVINPDDYVIKDEDM+Q AMH GGD++GKLDE AA LILD KPSKVVS+E TVQVKCSL
Sbjct: 481 GEVINPDDYVIKDEDMNQIAMHGGGDINGKLDEGAAGLILDTKPSKVVSDERTVQVKCSL 540

Query: 541 HYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETI 600
            YMDFEGRSDGRSIK+ILSHVAPLKLVLVHG+AEATEHLKQHCLK+VCPHV APQI+ETI
Sbjct: 541 VYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVSAPQIDETI 600

Query: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKS 660
           DVTSDLCAYKV LSEKLMSNVLFKKLGDYE+ W+DA VGKTE+ TLS+LP+S+A  PHKS
Sbjct: 601 DVTSDLCAYKVLLSEKLMSNVLFKKLGDYEVAWVDAVVGKTESDTLSVLPVSEAAPPHKS 660

Query: 661 VLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGP 720
           VLVGDLK+AD KQFL+SKG+QVEFAGGALRCGEYVTLRKV DA+QKGGGSG QQ+VIEGP
Sbjct: 661 VLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDATQKGGGSGAQQIVIEGP 720

Query: 721 LCEDYYKIRELLYSQFYLL 739
           LCEDYYKIR+ LYSQFYLL
Sbjct: 721 LCEDYYKIRDYLYSQFYLL 739

[Close]
BLAST of Cucsa.107900 vs. TrEMBL
Match: A0A0S3TBA1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G180900 PE=4 SV=1)

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 628/739 (84.98%), Postives = 685/739 (92.69%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+D FNFL+DCGWND FDP+LLQPLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDQFDPSLLQPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SH DTLHLGALPYA+KQLGLSAPV+STEPV+RLGLLTMYDQ+++RKQVSEFDLFTLDDID
Sbjct: 61  SHADTLHLGALPYAIKQLGLSAPVYSTEPVFRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ VTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQSVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT L SFVRPAVLITDAYNALNNQPYRRQKDKEFGD ++KTLRA GNVLLPVDTAG
Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELI +LE YW +E+LNYPI+FLTYVASSTIDY+KSFLEWMSD+IAKSFE TR N FL
Sbjct: 241 RVLELILLLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENIFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LK+VTLLINK++LDNAP+GPKVVLASMASLEAG+SHDIFV+WA D+KNLVLF+ERGQF T
Sbjct: 301 LKYVTLLINKTDLDNAPEGPKVVLASMASLEAGFSHDIFVEWANDSKNLVLFTERGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420
           LARMLQADPPPKAVKV VSKRVPL G+ELIAYEEEQ+R K+EALKASL+KEE+ K SHG+
Sbjct: 361 LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQDRIKKEALKASLMKEEELKTSHGS 420

Query: 421 DNDTGDPMIIDASSN-VAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDF 480
           +N+  DPM+ID+ +N V P+V    GG YRDI IDGFVPPST VAPMFP YENTS WDDF
Sbjct: 421 ENNNSDPMVIDSGNNHVPPEVAGPRGGGYRDIFIDGFVPPSTSVAPMFPCYENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 540
           GEVINPDDYVIKDEDM+Q AMH GGD++GKLDE AA LILD KPSKVVS+E TVQVKC L
Sbjct: 481 GEVINPDDYVIKDEDMNQIAMHGGGDINGKLDEGAAGLILDTKPSKVVSDERTVQVKCVL 540

Query: 541 HYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETI 600
            YMDFEGRSDGRSIK+ILSHVAPLKLVLVHG+AEATEHLKQHCLK+VCPHVYAPQI+ETI
Sbjct: 541 VYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIDETI 600

Query: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKS 660
           DVTSDLCAYKVQLSEKLMSNVLFKKLGDYE+ W+DA VGKTEN  LSLLP+S+A  PHKS
Sbjct: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAVVGKTENDMLSLLPVSEAAPPHKS 660

Query: 661 VLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGP 720
           VLVGDLK+AD KQFL+ KG+QVEFAGGALRCGEYVTLRKV DA+QKGGGSG QQ+VIEGP
Sbjct: 661 VLVGDLKLADIKQFLSGKGVQVEFAGGALRCGEYVTLRKVGDATQKGGGSGAQQIVIEGP 720

Query: 721 LCEDYYKIRELLYSQFYLL 739
           LCEDYYKIR+ LYSQFYLL
Sbjct: 721 LCEDYYKIRDYLYSQFYLL 739

[Close]
BLAST of Cucsa.107900 vs. TrEMBL
Match: A0A0L9VJ79_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g099800 PE=4 SV=1)

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 628/739 (84.98%), Postives = 685/739 (92.69%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+D FNFL+DCGWND FDP+LLQPLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDQFDPSLLQPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SH DTLHLGALPYA+KQLGLSAPV+STEPV+RLGLLTMYDQ+++RKQVSEFDLFTLDDID
Sbjct: 61  SHADTLHLGALPYAIKQLGLSAPVYSTEPVFRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ VTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQSVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT L SFVRPAVLITDAYNALNNQPYRRQKDKEFGD ++KTLRA GNVLLPVDTAG
Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELI +LE YW +E+LNYPI+FLTYVASSTIDY+KSFLEWMSD+IAKSFE TR N FL
Sbjct: 241 RVLELILLLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENIFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LK+VTLLINK++LDNAP+GPKVVLASMASLEAG+SHDIFV+WA D+KNLVLF+ERGQF T
Sbjct: 301 LKYVTLLINKTDLDNAPEGPKVVLASMASLEAGFSHDIFVEWANDSKNLVLFTERGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420
           LARMLQADPPPKAVKV VSKRVPL G+ELIAYEEEQ+R K+EALKASL+KEE+ K SHG+
Sbjct: 361 LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQDRIKKEALKASLMKEEELKTSHGS 420

Query: 421 DNDTGDPMIIDASSN-VAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDF 480
           +N+  DPM+ID+ +N V P+V    GG YRDI IDGFVPPST VAPMFP YENTS WDDF
Sbjct: 421 ENNNSDPMVIDSGNNHVPPEVAGPRGGGYRDIFIDGFVPPSTSVAPMFPCYENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 540
           GEVINPDDYVIKDEDM+Q AMH GGD++GKLDE AA LILD KPSKVVS+E TVQVKC L
Sbjct: 481 GEVINPDDYVIKDEDMNQIAMHGGGDINGKLDEGAAGLILDTKPSKVVSDERTVQVKCVL 540

Query: 541 HYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETI 600
            YMDFEGRSDGRSIK+ILSHVAPLKLVLVHG+AEATEHLKQHCLK+VCPHVYAPQI+ETI
Sbjct: 541 VYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIDETI 600

Query: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKS 660
           DVTSDLCAYKVQLSEKLMSNVLFKKLGDYE+ W+DA VGKTEN  LSLLP+S+A  PHKS
Sbjct: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAVVGKTENDMLSLLPVSEAAPPHKS 660

Query: 661 VLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGP 720
           VLVGDLK+AD KQFL+ KG+QVEFAGGALRCGEYVTLRKV DA+QKGGGSG QQ+VIEGP
Sbjct: 661 VLVGDLKLADIKQFLSGKGVQVEFAGGALRCGEYVTLRKVGDATQKGGGSGAQQIVIEGP 720

Query: 721 LCEDYYKIRELLYSQFYLL 739
           LCEDYYKIR+ LYSQFYLL
Sbjct: 721 LCEDYYKIRDYLYSQFYLL 739

[Close]
BLAST of Cucsa.107900 vs. TAIR10
Match: AT5G23880.1 (AT5G23880.1 cleavage and polyadenylation specificity factor 100)

HSP 1 Score: 1186.4 bits (3068), Expect = 0.0e+00
Identity = 580/741 (78.27%), Postives = 667/741 (90.01%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+D FNFLIDCGWND FD +LL+PLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLH+GALPYAMKQLGLSAPV++TEPV+RLGLLTMYDQF++RKQVS+FDLFTLDDID
Sbjct: 61  SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ V RLTYSQN+HLSGKGEGIVIAPHVAGH+LGG++W+ITKDGEDVIYAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           RHLNGT+L+SFVRPAVLITDAY+AL  NQ  R+Q+DKEF DTI K L   GNVLLPVDTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAF 300
           GRVLEL+ ILE +W +   ++PI+FLTYV+SSTIDY+KSFLEWMSD+I+KSFE +R+NAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 301 LLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFG 360
           LL+HVTLLINK++LDNAP GPKVVLASMASLEAG++ +IFV+WA D +NLVLF+E GQFG
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 361 TLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNR-KKEEALKASLLKEEQSKASH 420
           TLARMLQ+ PPPK VKVT+SKRVPL G+ELIAYEEEQNR K+EEAL+ASL+KEE++KASH
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 421 GADNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDD 480
           G+D+++ +PMIID  +    DV  SHG AY+DILIDGFVPPS+ VAPMFP+Y+NTS WDD
Sbjct: 421 GSDDNSSEPMIIDTKTT--HDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 480

Query: 481 FGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 540
           FGE+INPDDYVIKDEDMD+ AMH GGDVDG+LDE  A+L+LD +PSKV+SNEL V V CS
Sbjct: 481 FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEET 600
           L  MD+EGRSDGRSIKS+++HV+PLKLVLVH  AEATEHLKQHCL N+CPHVYAPQIEET
Sbjct: 541 LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 600

Query: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHK 660
           +DVTSDLCAYKVQLSEKLMSNV+FKKLGD E+ W+D+EVGKTE    SLLP+  A +PHK
Sbjct: 601 VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHK 660

Query: 661 SVLVGDLKMADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVTDASQKGGGSGTQQVVIE 720
            VLVGDLK+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKV    QKGG SG QQ++IE
Sbjct: 661 PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIE 720

Query: 721 GPLCEDYYKIRELLYSQFYLL 739
           GPLCEDYYKIR+ LYSQFYLL
Sbjct: 721 GPLCEDYYKIRDYLYSQFYLL 739

[Close]
BLAST of Cucsa.107900 vs. TAIR10
Match: AT1G61010.1 (AT1G61010.1 cleavage and polyadenylation specificity factor 73-I)

HSP 1 Score: 140.2 bits (352), Expect = 5.1e-33
Identity = 102/373 (27.35%), Postives = 172/373 (46.11%), Query Frame = 1 

Query: 2   GTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVA--STIDAVL 61
           G  + VTPL            +S    N L DCG +  +      P       S+ID +L
Sbjct: 19  GDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYFDEIDPSSIDVLL 78

Query: 62  ISHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDI 121
           I+H    H  +LPY +++   +  VF T     +  L + D     K   E  LF   DI
Sbjct: 79  ITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDI 138

Query: 122 DSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRK 181
           + +   +  + + Q   ++G    I    + AGH+LG  ++ +   G  ++Y  D++  +
Sbjct: 139 NKSMDKIEVIDFHQTVEVNG----IKFWCYTAGHVLGAAMFMVDIAGVRILYTGDYSREE 198

Query: 182 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 241
           +RHL    L  F  P + I ++ + +     R  ++K F D I  T+   G VL+P    
Sbjct: 199 DRHLRAAELPQF-SPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGRVLIPAFAL 258

Query: 242 GRVLELIQILEWYW--EEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNN 301
           GR  EL+ IL+ YW    +  N PI++ + +A   +   ++++  M+D I   F    +N
Sbjct: 259 GRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRNQF--ANSN 318

Query: 302 AFLLKHVTLLINKSELDNAPD-GPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERG 361
            F+ KH++ L   + +D+  D GP VV+A+   L++G S  +F  W  D KN  +     
Sbjct: 319 PFVFKHISPL---NSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIPGYM 378

Query: 362 QFGTLARMLQADP 370
             GTLA+ +  +P
Sbjct: 379 VEGTLAKTIINEP 381

[Close]
BLAST of Cucsa.107900 vs. TAIR10
Match: AT2G01730.1 (AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II)

HSP 1 Score: 126.3 bits (316), Expect = 7.7e-29
Identity = 92/357 (25.77%), Postives = 163/357 (45.66%), Query Frame = 1 

Query: 22  LVSVDDFNFLIDCGWNDHFDP-------ALLQPLSRVASTIDAVLISHPDTLHLGALPYA 81
           +V+++    + DCG +   D        +L+       + I  ++I+H    H+GALPY 
Sbjct: 20  VVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITHFHMDHVGALPYF 79

Query: 82  MKQLGLSAPVFSTEPVYRLGLLTMYD-QFIARKQVSEFDLFTLDDIDSAFQVVTRLTYSQ 141
            +  G + P++ + P   L  L + D + +   +  E +LFT   I +  + V  +   Q
Sbjct: 80  TEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTTHIANCMKKVIAIDLKQ 139

Query: 142 NHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESFVR 201
              +    E + I  + AGH+LG  +         ++Y  D+N   +RHL    ++  ++
Sbjct: 140 TIQVD---EDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHLGAAKIDR-LQ 199

Query: 202 PAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEWYW 261
             +LI+++  A   +  +  +++EF   + K +   G  L+P    GR  EL  +L+ YW
Sbjct: 200 LDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYW 259

Query: 262 EEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLINKSEL 321
           E  ++  PI+F + +      Y K  + W S  + +  +H  +N F  K+V        L
Sbjct: 260 ERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKE--KHNTHNPFDFKNVKDF--DRSL 319

Query: 322 DNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGTLARMLQADPP 371
            +AP GP V+ A+   L AG+S ++F  WA    NLV        GT+   L A  P
Sbjct: 320 IHAP-GPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMAGKP 367


HSP 2 Score: 43.9 bits (102), Expect = 5.0e-04
Identity = 37/149 (24.83%), Postives = 65/149 (43.62%), Query Frame = 1 

Query: 513 TAANLILDMKPSKV-VSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGT 572
           T  + ++  KP+ V + N   V V+C +H + F   +D + I  +   ++P  +VLVHG 
Sbjct: 357 TVGHKLMAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGE 416

Query: 573 AEATEHLKQHCLKNVCPHVYAPQIEETIDV--TSDLCAYKVQLSEKLMSNVLFKKLGDYE 632
             +   LK+     +    + P   ET+    T+ + A    +  K  SN  FK     +
Sbjct: 417 KPSMMILKEKITSELDIPCFVPANGETVSFASTTYIKANASDMFLKSCSNPNFKFSNSTQ 476

Query: 633 ITWLDAEVGKTENGTLSLLPLSKAPAPHK 659
           +   D    +T +G L +    KA   H+
Sbjct: 477 LRVTD---HRTADGVLVIEKSKKAKIVHQ 502

[Close]
BLAST of Cucsa.107900 vs. NCBI nr
Match: gi|449446027|ref|XP_004140773.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis sativus])

HSP 1 Score: 1481.8 bits (3835), Expect = 0.0e+00
Identity = 738/738 (100.00%), Postives = 738/738 (100.00%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420
           LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480
           DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG
Sbjct: 421 DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720
           LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Cucsa.107900 vs. NCBI nr
Match: gi|659077516|ref|XP_008439247.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis melo])

HSP 1 Score: 1475.3 bits (3818), Expect = 0.0e+00
Identity = 733/738 (99.32%), Postives = 735/738 (99.59%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQV+TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420
           LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480
           DNDTGDPMIIDASSN APDVGSSHGGAYRDILIDGFVPPST VAPMFPFYENTSAWDDFG
Sbjct: 421 DNDTGDPMIIDASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600
           YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQ+EETID
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQVEETID 600

Query: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660
           VTSDLCAYKVQLSEKLMSNVLFKKLGDYEI WLDAEVGKTENGTLSLLPLSKAPAPHKSV
Sbjct: 601 VTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720
           LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL
Sbjct: 661 LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGPL 720

Query: 721 CEDYYKIRELLYSQFYLL 739
           CEDYYKIRELLYSQFYLL
Sbjct: 721 CEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Cucsa.107900 vs. NCBI nr
Match: gi|1009122641|ref|XP_015878111.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 650/740 (87.84%), Postives = 695/740 (93.92%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQ+TPLCGVYNENPLSYLVS+D FNFLIDCGWNDHFDP+LLQP+SRVASTIDAVL+
Sbjct: 1   MGTSVQITPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPISRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQ  LSAPVFSTEPVYRLGLLTMYDQ+++RKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQFALSAPVFSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ VTRLTYSQNHHLSGKGEGIVI+PHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQNVTRLTYSQNHHLSGKGEGIVISPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           +HLNG    SFVRPAVLITDAYNALNNQPYRRQKDKEF DTI+KTLRA+G VLLPVDTAG
Sbjct: 181 KHLNGINQSSFVRPAVLITDAYNALNNQPYRRQKDKEFTDTIKKTLRADGKVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILE  W EE+LNYPIFFLTYVASSTIDY+KSFLEWMSD+IAKSFE TR+NAFL
Sbjct: 241 RVLELIQILESCWVEENLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRDNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LKHVTLL+NKSELDNAP+GPKVVLASMASLEAG+SHDIFV+WA DAKNLVLF+ERGQFGT
Sbjct: 301 LKHVTLLVNKSELDNAPEGPKVVLASMASLEAGFSHDIFVEWATDAKNLVLFTERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNR-KKEEALKASLLKEEQSKASHG 420
           LARMLQADPPPKAVKVT+SKRVPL G+ELIAYEEEQNR KKEEALKAS++KEE+SKASHG
Sbjct: 361 LARMLQADPPPKAVKVTMSKRVPLVGEELIAYEEEQNRIKKEEALKASIIKEEESKASHG 420

Query: 421 ADNDTGDPMIIDASS-NVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDD 480
           AD++T DPM+IDASS +  PDV   HG  YRDILIDGFVP ST VAPMFPFYENTS WDD
Sbjct: 421 ADDNTSDPMVIDASSTHPLPDVAGPHGVGYRDILIDGFVPSSTSVAPMFPFYENTSEWDD 480

Query: 481 FGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 540
           FGEVINPDDYVIKDEDMDQAAMH GGD+DGKLDE +A+L+LD KPSKVVSNELTVQVK S
Sbjct: 481 FGEVINPDDYVIKDEDMDQAAMHVGGDLDGKLDEGSASLMLDTKPSKVVSNELTVQVKSS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEET 600
           L YMDFEGRSD RSIKSILSH+APLKLVLVHGTAEATEHLKQHCLK+VCPHVYAPQIEET
Sbjct: 541 LLYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCLKHVCPHVYAPQIEET 600

Query: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHK 660
           IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEI W+DAEVGKTEN +LSL P+S AP PHK
Sbjct: 601 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENDSLSLQPISTAPPPHK 660

Query: 661 SVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEG 720
           SVLVGDLKMA+FKQFLA  G+QVEF+GGALRCGEYVTLRKV DAS KGGGSGTQQ+VIEG
Sbjct: 661 SVLVGDLKMANFKQFLADNGVQVEFSGGALRCGEYVTLRKVGDASHKGGGSGTQQIVIEG 720

Query: 721 PLCEDYYKIRELLYSQFYLL 739
           PLCE+YYKIRE LYSQFYLL
Sbjct: 721 PLCEEYYKIREYLYSQFYLL 740

[Close]
BLAST of Cucsa.107900 vs. NCBI nr
Match: gi|1009122643|ref|XP_015878112.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 1306.6 bits (3380), Expect = 0.0e+00
Identity = 648/739 (87.69%), Postives = 692/739 (93.64%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQ+TPLCGVYNENPLSYLVS+D FNFLIDCGWNDHFDP+LLQP+SRVASTIDAVL+
Sbjct: 1   MGTSVQITPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPISRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQ  LSAPVFSTEPVYRLGLLTMYDQ+++RKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQFALSAPVFSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ VTRLTYSQNHHLSGKGEGIVI+PHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQNVTRLTYSQNHHLSGKGEGIVISPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           +HLNG    SFVRPAVLITDAYNALNNQPYRRQKDKEF DTI+KTLRA+G VLLPVDTAG
Sbjct: 181 KHLNGINQSSFVRPAVLITDAYNALNNQPYRRQKDKEFTDTIKKTLRADGKVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELIQILE  W EE+LNYPIFFLTYVASSTIDY+KSFLEWMSD+IAKSFE TR+NAFL
Sbjct: 241 RVLELIQILESCWVEENLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRDNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LKHVTLL+NKSELDNAP+GPKVVLASMASLEAG+SHDIFV+WA DAKNLVLF+ERGQFGT
Sbjct: 301 LKHVTLLVNKSELDNAPEGPKVVLASMASLEAGFSHDIFVEWATDAKNLVLFTERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNR-KKEEALKASLLKEEQSKASHG 420
           LARMLQADPPPKAVKVT+SKRVPL G+ELIAYEEEQNR KKEEALKAS++KEE+SKASHG
Sbjct: 361 LARMLQADPPPKAVKVTMSKRVPLVGEELIAYEEEQNRIKKEEALKASIIKEEESKASHG 420

Query: 421 ADNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDF 480
           AD++T DPM+IDASS   P     HG  YRDILIDGFVP ST VAPMFPFYENTS WDDF
Sbjct: 421 ADDNTSDPMVIDASS-THPLPDGPHGVGYRDILIDGFVPSSTSVAPMFPFYENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 540
           GEVINPDDYVIKDEDMDQAAMH GGD+DGKLDE +A+L+LD KPSKVVSNELTVQVK SL
Sbjct: 481 GEVINPDDYVIKDEDMDQAAMHVGGDLDGKLDEGSASLMLDTKPSKVVSNELTVQVKSSL 540

Query: 541 HYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETI 600
            YMDFEGRSD RSIKSILSH+APLKLVLVHGTAEATEHLKQHCLK+VCPHVYAPQIEETI
Sbjct: 541 LYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCLKHVCPHVYAPQIEETI 600

Query: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKS 660
           DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEI W+DAEVGKTEN +LSL P+S AP PHKS
Sbjct: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENDSLSLQPISTAPPPHKS 660

Query: 661 VLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGP 720
           VLVGDLKMA+FKQFLA  G+QVEF+GGALRCGEYVTLRKV DAS KGGGSGTQQ+VIEGP
Sbjct: 661 VLVGDLKMANFKQFLADNGVQVEFSGGALRCGEYVTLRKVGDASHKGGGSGTQQIVIEGP 720

Query: 721 LCEDYYKIRELLYSQFYLL 739
           LCE+YYKIRE LYSQFYLL
Sbjct: 721 LCEEYYKIREYLYSQFYLL 738

[Close]
BLAST of Cucsa.107900 vs. NCBI nr
Match: gi|571477580|ref|XP_006587302.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform X1 [Glycine max])

HSP 1 Score: 1292.7 bits (3344), Expect = 0.0e+00
Identity = 635/739 (85.93%), Postives = 683/739 (92.42%), Query Frame = 1 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+D FNFL+DCGWNDHFDP+ LQPL+RVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SH DTLHLGALPYAMK+LGLSAPV+STEPVYRLGLLTMYDQ+++RKQVSEFDLFTLDDID
Sbjct: 61  SHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ VTRLTYSQNHH SGKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT+L SFVRPAVLITDAYNALNNQPYRRQ DKEFGD ++KTLRA GNVLLPVDT G
Sbjct: 181 RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTVG 240

Query: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300
           RVLELI +LE YW +E+LNYPI+FLTYVASSTIDY+KSFLEWMSDTIAKSFE TR N FL
Sbjct: 241 RVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360
           LK+VTLLINK+ELDNAPDGPKVVLASMASLEAG+SHDIFV+WA D KNLVLF+ERGQF T
Sbjct: 301 LKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420
           LARMLQADPPPKAVKV VSKRVPL G+ELIAYEEEQNR K+EALKASL+KEE+ K SHGA
Sbjct: 361 LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKEALKASLMKEEELKTSHGA 420

Query: 421 DNDTGDPMIIDASSN-VAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDF 480
           DND  DPM+ID+ +N V P+V    GG YRDI IDGFVPPST VAP+FP YENTS WDDF
Sbjct: 421 DNDISDPMVIDSGNNHVPPEVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 540
           GEVINPDDYVIKDEDMDQ AMH G D++GKLDE AA+LILD KPSKVVS+E TVQV+CSL
Sbjct: 481 GEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSL 540

Query: 541 HYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETI 600
            YMDFEGRSDGRSIK+ILSHVAPLKLVLVHG+AEATEHLKQHCLK+VCPHVYAPQIEETI
Sbjct: 541 VYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEETI 600

Query: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKS 660
           DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEI W+DA VGKTEN  LSLLP+S A  PHKS
Sbjct: 601 DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGAAPPHKS 660

Query: 661 VLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGP 720
           VLVGDLK+AD KQFL+SKG+QVEFAGGALRCGEYVTLRKV DASQKGGGSG QQ+VIEGP
Sbjct: 661 VLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIEGP 720

Query: 721 LCEDYYKIRELLYSQFYLL 739
           LCEDYYKIR+ LYSQFYLL
Sbjct: 721 LCEDYYKIRDYLYSQFYLL 739

The following BLAST results are available for this feature:
BLAST of Cucsa.107900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CPSF2_ARATH0.0e+0078.27Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thalian... [more]
CPSF2_ORYSJ0.0e+0074.32Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp.... [more]
CPSF2_DROME6.7e-15238.38Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila... [more]
CPSF2_XENLA1.0e-13936.68Cleavage and polyadenylation specificity factor subunit 2 OS=Xenopus laevis GN=c... [more]
CPSF2_BOVIN2.2e-13940.72Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus GN=CPSF2... [more]
BLAST of Cucsa.107900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBF9_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182220 PE=4 SV=1[more]
K7LDR8_SOYBN0.0e+0085.93Uncharacterized protein OS=Glycine max GN=GLYMA_09G136900 PE=4 SV=1[more]
V7C4P9_PHAVU0.0e+0085.12Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G114000g PE=4 SV=1[more]
A0A0S3TBA1_PHAAN0.0e+0084.98Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G180900 PE=... [more]
A0A0L9VJ79_PHAAN0.0e+0084.98Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g099800 PE=4 SV=1[more]
BLAST of Cucsa.107900 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23880.10.0e+0078.27 cleavage and polyadenylation specificity factor 100[more]
AT1G61010.15.1e-3327.35 cleavage and polyadenylation specificity factor 73-I[more]
AT2G01730.17.7e-2925.77 cleavage and polyadenylation specificity factor 73 kDa subunit-II[more]
BLAST of Cucsa.107900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446027|ref|XP_004140773.1|0.0e+00100.00PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis sa... [more]
gi|659077516|ref|XP_008439247.1|0.0e+0099.32PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis me... [more]
gi|1009122641|ref|XP_015878111.1|0.0e+0087.84PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform X1 ... [more]
gi|1009122643|ref|XP_015878112.1|0.0e+0087.69PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform X2 ... [more]
gi|571477580|ref|XP_006587302.1|0.0e+0085.93PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isofor... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001279Metallo-B-lactamas
IPR011108RMMBL
IPR022712Beta_Casp
IPR025069Cpsf2_C
IPR027075CPSF2
Vocabulary: Cellular Component
TermDefinition
GO:0005847mRNA cleavage and polyadenylation specificity factor complex
Vocabulary: Biological Process
TermDefinition
GO:0006378mRNA polyadenylation
GO:0006379mRNA cleavage
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007267 cell-cell signaling
biological_process GO:0016569 chromatin modification
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0000338 protein deneddylation
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006378 mRNA polyadenylation
biological_process GO:0006379 mRNA cleavage
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0006306 DNA methylation
biological_process GO:0006342 chromatin silencing
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005847 mRNA cleavage and polyadenylation specificity factor complex
cellular_component GO:0009506 plasmodesma
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.107900.1Cucsa.107900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001279Metallo-beta-lactamaseGENE3DG3DSA:3.60.15.10coord: 9..254
score: 1.1
IPR001279Metallo-beta-lactamasePFAMPF16661Lactamase_B_6coord: 22..194
score: 2.4
IPR001279Metallo-beta-lactamaseunknownSSF56281Metallo-hydrolase/oxidoreductasecoord: 463..601
score: 1.78E-147coord: 5..375
score: 1.78E
IPR011108Zn-dependent metallo-hydrolase, RNA specificity domainPFAMPF07521RMMBLcoord: 532..583
score: 6.0
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 242..365
score: 2.2
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 242..365
score: 7.2
IPR025069Cleavage and polyadenylation specificity factor 2, C-terminalPFAMPF13299CPSF100_Ccoord: 642..735
score: 4.3
IPR027075Cleavage and polyadenylation specificity factor subunit 2PANTHERPTHR11203:SF5CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2coord: 1..377
score: 1.7E-268coord: 531..731
score: 1.7E
NoneNo IPR availableunknownCoilCoilcoord: 392..412
scor
NoneNo IPR availablePANTHERPTHR11203CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTORcoord: 531..731
score: 1.7E-268coord: 1..377
score: 1.7E